Lsi01G009400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G009400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WD40 repeat-containing protein HOS15
Location	chr01: 7598731 .. 7610024 (-)
RNA-Seq Expression	Lsi01G009400
Synteny	Lsi01G009400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAGCTGTCAATGACAGATCGACAATGTAAATAAGAGAGTACAGCCAGATGGCTGTATAAGATTGGAGGGTCATCTAAGCAAGGTACTACGACGGCATAGCGTAATGTCATTGACGGTTCTCGTTAACGCGACACTAAACCGTGGGTTTCCCTCTCTCTACGGCTTATTCGGCACCCTGAAAGGCTGAAAGCTGCAGTTTCACCGGCTCTCCATCTCCGTTAACAAAAGGGGTTTCCGTTTCATTCTTCATTCCAAGTGCCCGTACTGAAAATCTCTCTGTTTCATCTCTACGAGCTCCCCCGCATGATCGTTTAACCTCTCTCCGGCCTCACAGCCGGCGTTCTGTTGCCATGACGTCCATCACTTCCGTCGAATTGAATTACCTCGTCTTTCGGTACCTTCAGGAATCAGGTAGTTTTCGTTTTTCTAGCTCCTTCTAGCTTCTTTTTTTTTTTTTTTTTTGGAATTTCATTTTAGTTTGGTTTGCTGCCTTTTCATCTGTATAGATTAAATAGATGAGGAAATTTTTGGAATTCAATTCGCTTTTATTACAGAAGGAAATGTTGAGCTGATTTTTTAAATTTAGAAACGTAGCAGCGCGGGTTGGTTTTTGAGCTGGCTAGGGCTAGAAATTTTGTGTTCTTGTAATTTAATTTTGTAGATCAATGCAACTTTGGAAGGTTTGGTTTACTCGAGCTTTCTGTTTCTTTCTCCTTTTTCATTTACATACTGTGTGGTTCTGTTAGGTTTTTCGGTATTTTGATGTGGTGTTAATATGTGAGTTCTAGAGTAGGTTAGGCTTTGCATACGCGAGTGAAGCGCTAACTACGGCTACAAGCTTGGCGTTCCTTCCAATTTCTTGCTTGGTGTGAACCGGCGTTAAGCTGGGTAACCGGCGTTACAGATTGTGGCTTTGTCATTCCTCTTAGTTCAATTGAAAGGAAAATTTAAGTACACTTGTTTTCATTTTCATACACAGAGATCACTTTGAATGCAAATTGGGCCATGTAAATCTACTCTCACAGAGTGAGGGTGGGGGTCTCAAAGCTCACACTCTTCAATGAAACCATTAAATCTCTACTTAGATTTTGAAAGTACCCTTAACAGGCTTTTCCTTAGGGAATGTGGTAACATTAGTCTCCCACTCTAAACTCCCAACAGTGTTTGTCTTAATTTTCTTTCACCTTACTAGTTTTCTTTTGTCTGGTTTATTATTTGTCTGGAGGTTTTTATTCAATTTTGTTGTAGTTATTTTGAGCACTAATCTCTTTTTTTTTTACCTAATGAAAAGTTTTGTATCCTTTTTTTCCTTTAAAAAAAACCCTCTAAACTCCAACAGTGACTTCACAACTCAAATAAACCTCCCAACTCCTTCCAGACAGATTCTTCCTCCTATACCTTGGGTTCACCTTGCCTGAATCCTCTTATTTTGAAAATGAATGGAGAAGGAAAAAAAAAGCCCCAAATAGCCCTAAACTTGGAAAATGTTGGAGACTCCATGTAGTACCTTCTGGCTTCTGAGGACCCCCCAACATTTAGAGTCTCCCATTTTGAACCCTACCTCTCCAAATTCTTCTAATCTAGGCAAAAGTTAAAACACCTGTGACTAGGCTTAGTTTCTCTGGATAATACTTCCTTCTTCAATTAACTTTTTTCTGACACTGTCAAGGTATATAGGTCTCAATCCTGAAAATGAATTTCATCTAAATATAAGTTTATTAAATAATTGCAAATACGTTTGGAAAATCTTGAGTCAATTGCTAGTTTCTCTCTGAATATAAGTTTATTAAATAATTGCAAGTATGGGAAGAATTGTTTAGTGCCTTTGCATGGTCAACTGCCCCTCCCCGAGATTCATTAGCCTGGTTAAGAATGCTACTGATTGATCACCCCTTCAAATTACCAAGAAGCTCTTATGGACAAACATTGTGAGTGCGGTCTTGTGGAAGATTTGGGAAGAAAGAAATTCTCAGATTTTCCAAAGCAAGGATAGATCCTCAAAGGACGTCTTAGATCTATCTATTTTGCGTGCTCATACAACCCTTCAACAGTTATAGCTTAAATTTCCTTGTTACAAATTAGAAACATCTTTTGTAATCCCTTTGTCGGGGTCACTTTTGTATCTCTTTGGATATTTTCATTCTATCAATGAAATCATTTCTTATATAAAAAAAATGCTAGTTTCTCTCTGAAATTTCATTCTGTTCTTTTGAATTTTTGACCAATCTTATATCAAAGAAAACAAATTCTAATATTTTCTTCCTGCTGTCTGTTTCTTTTTTAGGTTTTATACATTCAGCCTTTGCTTTAGGGTATGAAGCTGGCATTAACAAGTGTTCTATTGATGGCAATTTGGTTCCACCTGGTGCTCTAGTTACTGTTGTACAGAAAGGGCTTCAGTACTTGGAGATGGAAGCTAATTTGAGTAATGTTAGCACAATAAACTTCATGTCTCTCCTAATTTTGTATGCTTGTATCTATTTAAGAACTATGCAGACTTGCGACCTGAGATACTTCTGTTTTAATCTTGTCAGAATGAGACAGATCTAGATGAAGATTTTTCATTCCTACAGCCTTTGGACCTTATTACAAAAGACGTCCATGAATTGCGTCAAATAATCAAAGATAAAAGGAAGAGTTTACTAAAAGAGAAAGAGAAAGATAAAGATTTAGATAAAGAACTTGAAAGTGAACGAGGACGTGTAAGAGAGAAGGAACGACGTGAAAGTGAAGTTGAACGTGGACGTGCAAGAGAGAAGGAACGACTTGAAAGGGAGAAAGAAAGACTGGAAAGGGAGAAAGAAAGACTGGAAAGGGATAAGGAGCATGATAAGGATAGAGATAAAATAGAAAAGGATAAGGAGCGGGAAAAGCAACATGAGAATTTCACAGATAGAGATATGGTTATGGATCAAGATGAAAAGGTCCATACAAACCAAGGAGAGAATGGAGTTTTCGGAGGTATCTTTTCCCCAGTGTTTTTCTTTAGTCCATGTATGTATCCATGAAATTACTGTTGTATGTTGTTTTCATAGTATGTTTGTACATACCATTGCCTTTTGCCTCTATTGTGTTTCTCAGATACTATCTGGTTTTCTTAGAACTGTTTGATCTAATACATATCATTTTCTTGGCCGGTTATTAAGTCCTTGTGTATGTTTCTTACATTTGGTTAGCATTATTAAGTGATCTGTGTGTTCATGCTTCATATGAAGTCACATAAATGTTAGAATCTTTCTCATAAAAAAAACAAAAATGTTAGAATCTAAACCACTTTCTAGTGGGTTATATTATTATTATTTTTAATTATTTAATTATTGTTATTGTTGTTGTTATTATTATTATTATTATTATTATTATTTGTTCTTGCCTCACTAGAGGATGAGTTCTGTAGTTCCCCCTCATCACCAATCTTTCCACAGACGATACATGTACTCAACTTTTTTGATGATTGAACATGTGTATCAACTATTATACTTGGTAGGTCCAGAACCAATGGATATATCTACGACCTCAACATCTCAGTCCTGTGAAATTTCCAGTTCTGATGTGACAATTTTGCAAGGACATACTTCTGAGGTGGGAATATTTTGTCAGTCTTCTTTGTTTATTCTATGATCGTTTTTTTCTCCTCAAAGGAATGGTTTGATATTTGATATTCTCCCTTATCCCCAATTTTTTCTATTCCAGCTGTATGCCTATGTGACGATCTGTTGCTTTCCACATCTAGGTTTGTGCCTGTGCATGGAATCCAACAGGTTCTCTTCTTGCATCAGGGTAGGTCCATTTTTTTCTTTTTATACACTAAATATTTGAATTGTTTTTGCCTTGCAAATATTAAGGGCTTACATTTCCATGTCTGTTGTTATATTGAACAGATTGCTTTTTTTAGCCTTTGTACCACCATAGGTTTGTATGGGGTTAAATGCTGGTTATAGGTTATAGCACTCAGTTTTCCTCCCCTTTCTGATACCAATTCATTGACACATCAGTTTCTCTGCTTGGATTAGTTTCTTTGCATGGAAAACAAATTTGACATCGGCTAATCAGTATTCGTTTACCCTTTCTTACGCCAGTTGGCCCTCTTGTTTGATCAAATATTAAATTTTTTTTACGGTGAATCAGATTTCTTATATGAAGTGGCAAATAGCATGGGATTACATATTGTGTGTACTGTCATACTTTTGTATAATCGAAGCAGGATGTTTGTTTAAGAAGTATTCTTGGAATTTTTTATTTAGTAGCAATAACTGCATGGGATACTATCTTGTGCTTAATTGCATACCTGATTAATCAGTACTTTGTACCTATCATTAATGTGGTATGTCTCAAGTGTAATTGAAAAAAGCATACTCATTCAGAATGTATATTATAAATATTTGTATAGTCTGACTTGTCTCCCTCCTCTTAGATTAGCAAGAAACGTGTATTATGGTTGTCTTCTGATCATGAGGCTTCTATATCTTTTATATATGCATTTTTAGATTCTTACTTCAATTACAGTTCTGGAGATTCAACAGCACGCATTTGGACAGTAGCGGATGGTAGCAGTAGGTCTGGAGCTCAAAGTGGTCCTTTAAACGTGTTGGTATTGAAGCATGTTAAGGGTAGAACTAACGAAAAGAGCAAAGATGTTACTACTCTAGATTGGAATGTGAGTTTTTTTAACATTTTAAAAAATTGTTTACACATGTATGCTATTGATGAGCTCTCACCTTGAAACTTTCTGCAGGATTCTAATTATAGAATAGGATATCATTTTGTTGTTGTCCTTTTTTGTTGTTGTTGTTGTTGAAAGGGATGTCACTTTGTTGTTATTATCTTTTAAATATCTTCTTCTGTAAGATTTGGTTGACTGGCTGCGTTTGCTTCATTTACTGTTTCTTTTTGTAGTTTGGTTTTATTTATCTTTTTGTAGTTATCTTGGTAATCAAAGGACTATTTGCGTTAATTTCATGTTATAGTTTTTATCTGGAGATGTGAATTTGTGAGGTCTATTGAAATCACTTTTTCAAGGAGTTTAGTTCCATATGAAGGAAGAATTGTTACCAACCCATTTTGTCCGCAGTCGTTTAAAGACGCGTGTTTAACAAAACTATGCTTCAACCTTGAAAAGAAATACACCTCTTTTTGGGTTTTTCCCTTGTGCTACTGCTACTGAGGGGAATTTGTACGTGTCTGTATGCCTATTGCAGGTCTATAGTTTAAGACATTTATTTGTGGACTGGTGGCTCTATTGGAAGTTAGTTGCACAAAGGCTGGCTGTTCTCTTTCTTTTTACATTTTCTTTTTGGTTGCCCTTGGGTCTGAATCCTTATGGCATAGAGTTATTATAAGCACGCATGACCCTCATCGCTTTGATTGGTTTTCAAGTGGGGTTAAAGGCACTTTCAGAACCCTTGGAAGGATGTTTCTCTAGAGCTCCCCTCCTCTCATTTGGTTTGTTGTGTGGTGGGGTAGGTAAGGAAACATATTTTGGGAAGATCGGTGGTAGGGGATAGACTGCTCTGCTCTGCTCGTCTCGTCTTTATCATTTGTCTTACCTTTAGCATTGCTTTATTTTTGACTTTCTAGTTTGGTCGGTGACTGATAGGGAAACGATGGCGGGTTGTCTCTTACTCTCTCTTCCGTCTTTGATGGGAGAGTTTGGTTTTAGGTTTGAGCGAAGGGATGTTCGTGTTTGGAGTCTCAACCCGTTAGATGGTTCCTCTTGAAAGTCTTTCTTTCGACATTTGCTGGAACCTCTCCTGTTAGTGAGTCTGTCTGTCCTTGATGCTTTGTGAAGGATCAAGATTTAGAAGAAAGTTAAGTTCTTTTCATGTCAAGTCTTACTCAGTCGTGTGAATTTTATGGACCGACTCTTGAGGAAGCTACTTTCGTTAGTTGGTCCCTTCTATTGTAATTCTTTGTCGGAAGGCGGAGGAAGATTTGGATCATCTTCTTTGGAGATGTGAGTTTGCAAGGTCGGTGTAAAATCACTTTTTCCAGGAGTTTAATTTCATGCTGGCTCTTTAGAGGAGTGTCACTAGTTCGATTAGAGAGTTCCTCTTCCATCCGCCTCTTAGAGAAGGGCTGCTTTCTTTGGGCTGTTGGGGCGTGCATTATGGGATTTGTGGGGAGAGAGAAATAACAGTGTTTGGTGGGTGGAGAGGGACCCTACTGTTGTTTGGTTCTTGGTGAAGTTTCATGTCTCTCTATGGGCTTCAATTTTGAAGACCTTTTGTAATACTCTTTAGGCAACATTTTACTTAGTTTGGACGATTTTTCTTTGATGGGGCTTTTGTGGGCTTGGTTTTTTTTACGTGTGAGAACCCCCCTCTGCACCCCAAAAAAGAAAAGAGGGGATGATGTCTCATGTCTATGCCATCTCTTTATTTTGAGTGCTATATATATATATATATATATATATATATATATATATATATATATATAATTTTTTTCTTTTAAAGGTTTTGTTATCCTAATCATAAAGCTATAGCTTTTTTCCATCATGTAGGGAGACGGGACCCTGCTTGCTACTGGTTCATATGATGGACAAGCTAGAATTTGGAGCACCAATGGTAAGCTCCGTAATAAATTTGCTACCTACAATTTTATCTTTAGAAGGTGAAGTATAAATAAGATACATCACTGTCAAGAATTACGAACATGAACATCAAATATGCCAAATGGCATAAAAACATTCAACATGCCTTATTCTCAGAAATTAGGACGTGAACTTATTTTGACATTGTTTAATAAACAGAGGATATGAACTATATCATTGTATTTTGAAGCTTTGTATTTCGAGCATTAGTCTCTATCCATTACATCAATGAAAAGTTCGTTTCCGTTCCAAAAAAAAAAAAAATAGAGGATATGAACATTTAAATAAATAGACATGAAACTATTTGTATTTTGAATTACGACATTTATATTTAAAATATGAGATGAAAGAAAGGATAACATATATAACACACAGGAAGTCGAAGCAATCCAAACCTGATCTTGTATCTTATAGTAAGGGTTCTAATGAAATCTAAAACCAAGTATTTGTATATTTGATTTAACATCTATTGAGAAAAGTAAATTGAATATCAAAACATTTGTACAATCTTAGGTTTAAAGAATGAGCTTGATGGGATTTTTTTTATAAATTTTTTTTAACAAACAAAATTAAAAATGTATTATGTGACCATTAATATATAGGGTAATTGTTTTAATTGGAAAAACTGCTGCAATTATTTTCAAATATAAAAATGTCACTGTCTATCAATGATAGATACTTAAGTATCTATCATTGTCTATCATCGATAGACAATGACATTTTGCTATTTTGCTAGATTTGAAAACAACCCTAATATGTATGTTTGGTTTAGTGGTCAATAAGATCCAATGTAAATAACAAAGGCTTGGAGGGAATGAATTTAAGCCCTGATTATTAACAATTGGAGAGCTCTCCTTTATTAGTTTTGTGGGAGGGGGTTTCCTCAACCCTTTGCCCCTAGGCTGTTCTTTTTGGTTATTTTGATGAATATATATATCTCTGTTGAGGAGTCACACTATTACTAGGAACAAACTTGAGGGGGTGGAGGACTTCTTTTCTTACCTCTTGAATCAGGCAACAGTAACATTATTCTTAGTATGCAGATGGTTGGGCACTATGGGGAAATGTGAAACAGTTTGTTATGTAAAATGTCTGGATTTGCACGCAGAACAAAAAAGTAAGCCTATGGAAAATGTGGGCTAAATAGGCAACTTAAGGTGACATGTTAGTACAAACCCCATATCATGCCACCACCGAAGTCACTCCATTTTAGTTGACATGTTGGAGCTGCAGACTCCTTCCCAACTCTGGTTTAGCATGTTGCAGTTTGTAATGGAAAATGTCTGGATTTGCTCTCAGACCAAAAAAGTAAGCCTATGGAAAATGTGGGCTAAATAGGTAACTTAAGGTGACGTGTTAGTACAAACCTCATATCATGCCACCACCGAAGTCACTCCATTTTTGTTGACATGTTAGAGCGGCATACTCTTCCCAACTCTAGTTTAGCACGTTGCAATTTATTTCATCGATTTCTTTGGTGGACTAGTTGCAAGCTGCAACTTGTATGAAAGAGATGTGTGTTAGGAACGAAGGTAGTATGGGCTACCTTTGTCCCACATTAGTTAGAATAGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATGGTATCAGAGTAGGTTGGTTCAGGATGTTCTAGGTTCAAACCCCTGCATTGTTGTATCCTCCCCAATTAATATTGACTTCCACTTGTTGGCCATTCTTCATATTTTAAACCCACAAGTGAGGGGGAGTGTTAGCTTATATAATATTAAATTTGTCTTCACCCATCAACTTAAGTTTTTGCAGAGCCGGTTGTTGACGTTTCAGAGTGCAACCAGTAGAGGGTTCTGACCGGGTGTGGCCGAGTGAAGGTAGTATGGGCTACCTTTATCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTTAGCTTTTGGGGTGTGGTTTGTCCAAGGTACTTAAGTACCTAACAATGTGATCTTTGATGATCTCAAGTTTCAGCAATAAGAGATTGCAAACTATGGAAAGGGAACGTAGATAAACACCAAATGAATGTTCCTATGTAGACATGTAAGTTGTAAGGTAAGCTTAGATATAGGGGATGGATGAATTCTTGGGAGAGGTTGGAAGGCTGCTACACTTTGTACTCATTCTTTTGATATGAATATAGTTTCCTACATTTCCTGTGTGTCCGTCATTCATCTATCAGATCACTTTAATATGTTAATATATTGATTAAAAACTTGCCGAATAGAGACTTGGTAATTTCACAGAAAGATCCTTCACATATATCACCCAAAATAATTGCCAAGATGTATAACTATTTCATAAACAGATTATTCGATACCTAACTATTGAAAGAGCAAAAGACCTCAGCATCAACAAAATGAAGAAAAGGCAGTATCAGTATTGAGTTGAAGAAGAGGTGGAATATTCTTGGTAGTTGGTACCAACTTCTGTAACTGCCAATTGAGATTTGAACTAATTGACTAAGAACTGTCCAGTATACCTTTAAGAGAACCTCCTTGCCTCACACATAAACATTTGGAATACACACCGGAGAAGTTTTTATAAGGAAAGGAATGAGAATTAAGACAACCCTTGATCATGCATCACACCTATTTGGAATAATTTTTCTCCCCTTTATTGAACTTGGTAGTACTGATTTCTCTGTGTACTTCATAATGGTTGTATTACTTTCTACTTATGCTCTAGGTGAATTAAGGAGCACATTAAGTAAGCACAAAGGACCTATATTTTCTCTAAAGTGGAACAAGAAAGGTGATTATCTTCTCACTGGAAGCTGTGACAAAACTGCTATTGTTTGGGATGTGAAGGCAGAGGAATGGAAGCAACAGTTTGAATTTCATTCAGGTTGTATACAATACATTGAATGTTACTGAGGGAAAAAGAATTCTTGCAAAAAGTTTGCCATAATGATGCTGTTTGTACATTTAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACTGACAATATGATATATGTCTGCAAGATTGGAGAGACTCGTCCTATTAAAACATTTGCAGGACATCAGGTTTCGTTTTCCTCCCATCCCTCTTTTAAATGTATGGTATCGCTAGTTGTTTATCTACTTGAATTGTGAGTTATAAATCTGATTGATTTTGATCTAAATTCATTTTCGAGGTTAGTGTAATTTTCTAATTTTGTTTCAAGTTCCATGTCTAGCTAATTTTGTTTCGCAACTTTTAACTTTCAGGGTGAAGTAAACTGTGTCAAATGGGATCCCACAGGATCATTATTGGCTTCGTGTTCTGATGATATCACAGCCAAGGTATTTATATTCTCCAATTTTGTGGCTCATTTGCCACTGATTTTTGGGTTGAATTTTAGCTTGTCTTTAGTTTAACTTTTGAAATAAAAACTAAAGCAATAAAAGGATGTGCTTTACACATGCCCCATTCATTTGTTACATGCTGCTTGGATCTCGTGTTTTGGCATTTTTTCCCCAATTGTGTTCACCAGAAAGTTTGATGCAGATATGGAGTATGAAGCAGGACAAGTACGTTTATGATCTGAGGGAACATTCCAAGGTACCAGTGATCCAATTTCATGTCCTTTAATCTATACTTCTCTTCCAATTAGATTATAATGTCAGCTTTTTTTTTCCCCCCAGGAAATTTACACCATAAGATGGAGTCCCACTGGACCGGGAACAAACAATCCAAACCAGCAGTTGGTGTTGGCTAGGTGATTAGCTGTGTTGATGCTCTCTCTTTTTTAACCTTTGATAATTTGTTCACGTGACTGACCTCATGGTTTGCTTGTATTATAGTGCATCATTTGATTCAACAGTGAAGCTGTGGGATGTAGAACTCGGGAAACTTATCTGCAGTTTAAATGGACACAGGTACCATACTTTATTGTCAAATATGTTCAAGATTCTTATAGCATTGAAGTGTATATAAGTTTACCTGTTCTTCAGAAAATCTAGACTTGTCTACTAATTCTATTCTTTGAATCACCAGGGAACCTGTGTATTCTGTTGCATTCAGCCCAAATGGCGAGTACTTGGCCAGCGGATCTCTTGATAAATCAATGCACATATGGTCACTAAAGGAAGGCAAGATCATTAAAACATACACCGGTAATGGGGGTATATTTGAAGTTTGCTGGAACAAGGAAGGTGATAAAATCGCTGCCTGTTTTGCCAACAACACTGTTTGTGTCTTAGATTTCAGAATGTGAGATTTTGAGAAGTTCCAATAGAATTAGCTTCATACTTTCCTTCTTTTTTGATGGGGAAGAGAACTTAATTCCAGTGGAGGAGGTTGTTCTCTAACCTAGACCTTAGACTCAACTTTTCATGTCAATTTGTACCGTAATGTGTAATTGTCACTCCATTAATAGTAGACCCTGCTTCAACAATGTTTTAAGTCAACGACTTGTGTACAGCATTTGTAACTGTGTTTAGCAATTCTTATCTCAGCTGATTGTTGTATTGCAGCAGTATGTTTGTTAGGATTGTTTCATTGACTTGTGTACAGCATTTGTAACTGTCGTTTGCAATTCTTAGCTGATTGTTGCTTTGCAACAGTATATTTGTTAGGATTCCTTCATTGGTCTCCATCAATTCCTCCATATTTTCAAATGAA

mRNA sequence

CCGAGCTGTCAATGACAGATCGACAATGTAAATAAGAGAGTACAGCCAGATGGCTGTATAAGATTGGAGGGTCATCTAAGCAAGGTACTACGACGGCATAGCGTAATGTCATTGACGGTTCTCGTTAACGCGACACTAAACCGTGGGTTTCCCTCTCTCTACGGCTTATTCGGCACCCTGAAAGGCTGAAAGCTGCAGTTTCACCGGCTCTCCATCTCCGTTAACAAAAGGGGTTTCCGTTTCATTCTTCATTCCAAGTGCCCGTACTGAAAATCTCTCTGTTTCATCTCTACGAGCTCCCCCGCATGATCGTTTAACCTCTCTCCGGCCTCACAGCCGGCGTTCTGTTGCCATGACGTCCATCACTTCCGTCGAATTGAATTACCTCGTCTTTCGGTACCTTCAGGAATCAGGTTTTATACATTCAGCCTTTGCTTTAGGGTATGAAGCTGGCATTAACAAGTGTTCTATTGATGGCAATTTGGTTCCACCTGGTGCTCTAGTTACTGTTGTACAGAAAGGGCTTCAGTACTTGGAGATGGAAGCTAATTTGAGTAATAATGAGACAGATCTAGATGAAGATTTTTCATTCCTACAGCCTTTGGACCTTATTACAAAAGACGTCCATGAATTGCGTCAAATAATCAAAGATAAAAGGAAGAGTTTACTAAAAGAGAAAGAGAAAGATAAAGATTTAGATAAAGAACTTGAAAGTGAACGAGGACGTGTAAGAGAGAAGGAACGACGTGAAAGTGAAGTTGAACGTGGACGTGCAAGAGAGAAGGAACGACTTGAAAGGGAGAAAGAAAGACTGGAAAGGGAGAAAGAAAGACTGGAAAGGGATAAGGAGCATGATAAGGATAGAGATAAAATAGAAAAGGATAAGGAGCGGGAAAAGCAACATGAGAATTTCACAGATAGAGATATGGTTATGGATCAAGATGAAAAGGTCCATACAAACCAAGGAGAGAATGGAGTTTTCGGAGGTCCAGAACCAATGGATATATCTACGACCTCAACATCTCAGTCCTGTGAAATTTCCAGTTCTGATGTGACAATTTTGCAAGGACATACTTCTGAGGTGGGAATATTTTCTGTATGCCTATGTGACGATCTGTTGCTTTCCACATCTAGGTTTGTGCCTGTGCATGGAATCCAACAGGTTCTCTTCTTGCATCAGGGTAGTTCTGGAGATTCAACAGCACGCATTTGGACAGTAGCGGATGGTAGCAGTAGGTCTGGAGCTCAAAGTGGTCCTTTAAACGTGTTGGTATTGAAGCATGTTAAGGGTAGAACTAACGAAAAGAGCAAAGATGTTACTACTCTAGATTGGAATGGAGACGGGACCCTGCTTGCTACTGGTTCATATGATGGACAAGCTAGAATTTGGAGCACCAATGGTGAATTAAGGAGCACATTAAGTAAGCACAAAGGACCTATATTTTCTCTAAAGTGGAACAAGAAAGGTGATTATCTTCTCACTGGAAGCTGTGACAAAACTGCTATTGTTTGGGATGTGAAGGCAGAGGAATGGAAGCAACAGTTTGAATTTCATTCAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACTGACAATATGATATATGTCTGCAAGATTGGAGAGACTCGTCCTATTAAAACATTTGCAGGACATCAGGGTGAAGTAAACTGTGTCAAATGGGATCCCACAGGATCATTATTGGCTTCGTGTTCTGATGATATCACAGCCAAGATATGGAGTATGAAGCAGGACAAGTACGTTTATGATCTGAGGGAACATTCCAAGGAAATTTACACCATAAGATGGAGTCCCACTGGACCGGGAACAAACAATCCAAACCAGCAGTTGGTGTTGGCTAGTGCATCATTTGATTCAACAGTGAAGCTGTGGGATGTAGAACTCGGGAAACTTATCTGCAGTTTAAATGGACACAGGGAACCTGTGTATTCTGTTGCATTCAGCCCAAATGGCGAGTACTTGGCCAGCGGATCTCTTGATAAATCAATGCACATATGGTCACTAAAGGAAGGCAAGATCATTAAAACATACACCGGTAATGGGGGTATATTTGAAGTTTGCTGGAACAAGGAAGGTGATAAAATCGCTGCCTGTTTTGCCAACAACACTGTTTGTGTCTTAGATTTCAGAATGTGAGATTTTGAGAAGTTCCAATAGAATTAGCTTCATACTTTCCTTCTTTTTTGATGGGGAAGAGAACTTAATTCCAGTGGAGGAGGTTGTTCTCTAACCTAGACCTTAGACTCAACTTTTCATGTCAATTTGTACCGTAATGTGTAATTGTCACTCCATTAATAGTAGACCCTGCTTCAACAATGTTTTAAGTCAACGACTTGTGTACAGCATTTGTAACTGTGTTTAGCAATTCTTATCTCAGCTGATTGTTGTATTGCAGCAGTATGTTTGTTAGGATTGTTTCATTGACTTGTGTACAGCATTTGTAACTGTCGTTTGCAATTCTTAGCTGATTGTTGCTTTGCAACAGTATATTTGTTAGGATTCCTTCATTGGTCTCCATCAATTCCTCCATATTTTCAAATGAA

Coding sequence (CDS)

ATGACGTCCATCACTTCCGTCGAATTGAATTACCTCGTCTTTCGGTACCTTCAGGAATCAGGTTTTATACATTCAGCCTTTGCTTTAGGGTATGAAGCTGGCATTAACAAGTGTTCTATTGATGGCAATTTGGTTCCACCTGGTGCTCTAGTTACTGTTGTACAGAAAGGGCTTCAGTACTTGGAGATGGAAGCTAATTTGAGTAATAATGAGACAGATCTAGATGAAGATTTTTCATTCCTACAGCCTTTGGACCTTATTACAAAAGACGTCCATGAATTGCGTCAAATAATCAAAGATAAAAGGAAGAGTTTACTAAAAGAGAAAGAGAAAGATAAAGATTTAGATAAAGAACTTGAAAGTGAACGAGGACGTGTAAGAGAGAAGGAACGACGTGAAAGTGAAGTTGAACGTGGACGTGCAAGAGAGAAGGAACGACTTGAAAGGGAGAAAGAAAGACTGGAAAGGGAGAAAGAAAGACTGGAAAGGGATAAGGAGCATGATAAGGATAGAGATAAAATAGAAAAGGATAAGGAGCGGGAAAAGCAACATGAGAATTTCACAGATAGAGATATGGTTATGGATCAAGATGAAAAGGTCCATACAAACCAAGGAGAGAATGGAGTTTTCGGAGGTCCAGAACCAATGGATATATCTACGACCTCAACATCTCAGTCCTGTGAAATTTCCAGTTCTGATGTGACAATTTTGCAAGGACATACTTCTGAGGTGGGAATATTTTCTGTATGCCTATGTGACGATCTGTTGCTTTCCACATCTAGGTTTGTGCCTGTGCATGGAATCCAACAGGTTCTCTTCTTGCATCAGGGTAGTTCTGGAGATTCAACAGCACGCATTTGGACAGTAGCGGATGGTAGCAGTAGGTCTGGAGCTCAAAGTGGTCCTTTAAACGTGTTGGTATTGAAGCATGTTAAGGGTAGAACTAACGAAAAGAGCAAAGATGTTACTACTCTAGATTGGAATGGAGACGGGACCCTGCTTGCTACTGGTTCATATGATGGACAAGCTAGAATTTGGAGCACCAATGGTGAATTAAGGAGCACATTAAGTAAGCACAAAGGACCTATATTTTCTCTAAAGTGGAACAAGAAAGGTGATTATCTTCTCACTGGAAGCTGTGACAAAACTGCTATTGTTTGGGATGTGAAGGCAGAGGAATGGAAGCAACAGTTTGAATTTCATTCAGGTCCAACACTTGATGTTGATTGGCGCAACAATGTATCATTTGCAACAAGTTCCACTGACAATATGATATATGTCTGCAAGATTGGAGAGACTCGTCCTATTAAAACATTTGCAGGACATCAGGGTGAAGTAAACTGTGTCAAATGGGATCCCACAGGATCATTATTGGCTTCGTGTTCTGATGATATCACAGCCAAGATATGGAGTATGAAGCAGGACAAGTACGTTTATGATCTGAGGGAACATTCCAAGGAAATTTACACCATAAGATGGAGTCCCACTGGACCGGGAACAAACAATCCAAACCAGCAGTTGGTGTTGGCTAGTGCATCATTTGATTCAACAGTGAAGCTGTGGGATGTAGAACTCGGGAAACTTATCTGCAGTTTAAATGGACACAGGGAACCTGTGTATTCTGTTGCATTCAGCCCAAATGGCGAGTACTTGGCCAGCGGATCTCTTGATAAATCAATGCACATATGGTCACTAAAGGAAGGCAAGATCATTAAAACATACACCGGTAATGGGGGTATATTTGAAGTTTGCTGGAACAAGGAAGGTGATAAAATCGCTGCCTGTTTTGCCAACAACACTGTTTGTGTCTTAGATTTCAGAATGTGA

Protein sequence

MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQYLEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELESERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM

Homology

[Close]

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot
Match: Q9FN19 (WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana OX=3702 GN=HOS15 PE=2 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 4.9e-236
Identity = 430/637 (67.50%), Postives = 505/637 (79.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           M+S+TSVELN+LVFRYLQESGF H+AF LGYEAGINK +IDGN+VPPGAL+  VQKGLQY
Sbjct: 1   MSSLTSVELNFLVFRYLQESGFTHAAFTLGYEAGINKSNIDGNMVPPGALIKFVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKR-------KSLLKEKEKDK 120
           +EMEANLSN+E D+DEDFSF QPLDLI+KDV EL+ ++++K+       K   + KE DK
Sbjct: 61  MEMEANLSNSEVDIDEDFSFFQPLDLISKDVKELQDMLREKKRKERDMEKERDRSKENDK 120

Query: 121 DLDKELESERGRVREKERRESEVERGRAREK---------ERLEREKER---------LE 180
            +++E E +R R +EK+R E + ER R REK         E++EREKER          E
Sbjct: 121 GVEREHEGDRNRAKEKDRHEKQKEREREREKLEREKEREREKIEREKEREREKMEREIFE 180

Query: 181 REKERL----ERDKEHDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFG 240
           REK+RL    ER+ E +++R+KIE++K  EKQ  +  DR+MV+DQ +K     G  G   
Sbjct: 181 REKDRLKLEKEREIEREREREKIEREKSHEKQLGD-ADREMVIDQTDKEIAGDGSTGA-- 240

Query: 241 GPEPMDISTTSTSQSCEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQV 300
             EPMDI  T TSQ+  I +SDV IL+GHTSE     VC C     S S  +   G    
Sbjct: 241 --EPMDIVMTPTSQTSHIPNSDVRILEGHTSE-----VCAC---AWSPSASLLASG---- 300

Query: 301 LFLHQGSSGDSTARIWTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDG 360
                  SGD+TARIW++ +GS ++      +N L+LKH KG++NEKSKDVTTLDWNG+G
Sbjct: 301 -------SGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEG 360

Query: 361 TLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKA 420
           TLLATGS DGQARIW+ NGEL STLSKHKGPIFSLKWNKKGDYLLTGS D+TA+VWDVKA
Sbjct: 361 TLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA 420

Query: 421 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKW 480
           EEWKQQFEFHSGPTLDVDWRNNVSFATSSTD+MIY+CKIGETRP KTF GHQGEVNCVKW
Sbjct: 421 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKW 480

Query: 481 DPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLAS 540
           DPTGSLLASCSDD TAKIW++KQ  +V+DLREH+KEIYTIRWSPTGPGTNNPN+QL LAS
Sbjct: 481 DPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLAS 540

Query: 541 ASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKII 600
           ASFDSTVKLWD ELGK++CS NGHREPVYS+AFSPNGEY+ASGSLDKS+HIWS+KEGKI+
Sbjct: 541 ASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIV 600

Query: 601 KTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 609
           KTYTGNGGIFEVCWNKEG+KIAACFA+N+VCVLDFRM
Sbjct: 601 KTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLDFRM 613

[Close]

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot
Match: Q8BHJ5 (F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus OX=10090 GN=Tbl1xr1 PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 8.6e-140
Identity = 280/609 (45.98%), Postives = 364/609 (59.77%), Query Frame = 0


Query: 3   SITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQYLE 62
           SI+S E+N+LV+RYLQESGF HSAF  G E+ I++ +I+G LVPP AL++++QKGLQY+E
Sbjct: 2   SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVE 61

Query: 63  MEANLSNNETDLD-EDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELES 122
            E +++ + T  D      L  +D +  DV + RQ  +  R  L ++            +
Sbjct: 62  AEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQ--QAYRDKLAQQHAAAAAAAAAATN 121

Query: 123 ERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKERE 182
           ++G  +  E   +  E G                                          
Sbjct: 122 QQGSAKNGENTANGEENG------------------------------------------ 181

Query: 183 KQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGHT 242
             H    +   +M+ D  V                           EI S+   +L+GH 
Sbjct: 182 -AHTIANNHTDMMEVDGDV---------------------------EIPSNKAVVLRGHE 241

Query: 243 SEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQSG 302
           SEV I +     DLL S                    SGDSTARIW +++ S+     SG
Sbjct: 242 SEVFICAWNPVSDLLAS-------------------GSGDSTARIWNLSENST-----SG 301

Query: 303 PLNVLVLKHV---KGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSK 362
           P   LVL+H     G+    +KDVT+LDWN +GTLLATGSYDG ARIW+ +G L STL +
Sbjct: 302 PTQ-LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQ 361

Query: 363 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFAT 422
           HKGPIF+LKWNKKG+++L+   DKT I+WD    E KQQF FHS P LDVDW++N +FA+
Sbjct: 362 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 421

Query: 423 SSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYV 482
            STD  I+VCK+G+ RPIKTF GH  EVN +KWDPTG+LLASCSDD+T KIWSMKQD  V
Sbjct: 422 CSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV 481

Query: 483 YDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREP 542
           +DL+ H+KEIYTI+WSPTGPGTNNPN  L+LASASFDSTV+LWDV+ G  I +L  H+EP
Sbjct: 482 HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEP 513

Query: 543 VYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFAN 602
           VYSVAFSP+G YLASGS DK +HIW+ + G ++ +Y G GGIFEVCWN  GDK+ A  ++
Sbjct: 542 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 513

Query: 603 NTVCVLDFR 608
            +VCVLD R
Sbjct: 602 GSVCVLDLR 513

[Close]

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot
Match: Q9BZK7 (F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens OX=9606 GN=TBL1XR1 PE=1 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.5e-139
Identity = 278/609 (45.65%), Postives = 362/609 (59.44%), Query Frame = 0


Query: 3   SITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQYLE 62
           SI+S E+N+LV+RYLQESGF HSAF  G E+ I++ +I+G LVPP AL++++QKGLQY+E
Sbjct: 2   SISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVE 61

Query: 63  MEANLSNNETDLD-EDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELES 122
            E +++ + T  D      L  +D +  DV + RQ  +  R  L +++           S
Sbjct: 62  AEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQ--QAYRDKLAQQQAAAAAAAAAAAS 121

Query: 123 ERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKERE 182
           ++G  +  E   +  E G                                          
Sbjct: 122 QQGSAKNGENTANGEENG------------------------------------------ 181

Query: 183 KQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGHT 242
             H    +   +M+ D  V                           EI  +   +L+GH 
Sbjct: 182 -AHTIANNHTDMMEVDGDV---------------------------EIPPNKAVVLRGHE 241

Query: 243 SEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQSG 302
           SEV I +     DLL S                    SGDSTARIW +++ S+    Q  
Sbjct: 242 SEVFICAWNPVSDLLAS-------------------GSGDSTARIWNLSENSTSGSTQ-- 301

Query: 303 PLNVLVLKHV---KGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSK 362
               LVL+H     G+    +KDVT+LDWN +GTLLATGSYDG ARIW+ +G L STL +
Sbjct: 302 ----LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQ 361

Query: 363 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFAT 422
           HKGPIF+LKWNKKG+++L+   DKT I+WD    E KQQF FHS P LDVDW++N +FA+
Sbjct: 362 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 421

Query: 423 SSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYV 482
            STD  I+VCK+G+ RPIKTF GH  EVN +KWDPTG+LLASCSDD+T KIWSMKQD  V
Sbjct: 422 CSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV 481

Query: 483 YDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREP 542
           +DL+ H+KEIYTI+WSPTGPGTNNPN  L+LASASFDSTV+LWDV+ G  I +L  H+EP
Sbjct: 482 HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEP 513

Query: 543 VYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFAN 602
           VYSVAFSP+G YLASGS DK +HIW+ + G ++ +Y G GGIFEVCWN  GDK+ A  ++
Sbjct: 542 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASD 513

Query: 603 NTVCVLDFR 608
            +VCVLD R
Sbjct: 602 GSVCVLDLR 513

[Close]

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot
Match: O60907 (F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens OX=9606 GN=TBL1X PE=1 SV=3)

HSP 1 Score: 487.6 bits (1254), Expect = 2.0e-136
Identity = 274/609 (44.99%), Postives = 360/609 (59.11%), Query Frame = 0


Query: 3   SITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQYLE 62
           SITS E+N+LV+RYLQESGF HSAF  G E+ I++ +I+G LVPP AL++++QKGLQY+E
Sbjct: 53  SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVE 112

Query: 63  MEANLSNNETDLD-EDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELES 122
            E +++ + T  D      L  +D +  DV + RQ          +EK         L  
Sbjct: 113 AEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQ-------QAFREK---------LAQ 172

Query: 123 ERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKERE 182
           ++          +            +  +     RE                        
Sbjct: 173 QQASAAAAAAAATAAATAATTTSAGVSHQNPSKNREA----------------------- 232

Query: 183 KQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGHT 242
                      V  ++ + H+      V    +PM+I         EI SS  T+L+GH 
Sbjct: 233 ----------TVNGEENRAHS------VNNHAKPMEI-----DGEVEIPSSKATVLRGHE 292

Query: 243 SEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQSG 302
           SEV I +     DLL S                    SGDSTARIW + + S+    Q  
Sbjct: 293 SEVFICAWNPVSDLLAS-------------------GSGDSTARIWNLNENSNGGSTQ-- 352

Query: 303 PLNVLVLKHV---KGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSK 362
               LVL+H     G     +KDVT+LDWN +GTLLATGSYDG ARIW+ +G L STL +
Sbjct: 353 ----LVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQ 412

Query: 363 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFAT 422
           HKGPIF+LKWN+KG+Y+L+   DKT I+WD    E KQQF FHS P LDVDW+NN +FA+
Sbjct: 413 HKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFAS 472

Query: 423 SSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYV 482
            STD  I+VC++G  RP+KTF GH  EVN +KWDP+G LLASCSDD+T KIWSMKQ+  +
Sbjct: 473 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCI 532

Query: 483 YDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREP 542
           +DL+ H+KEIYTI+WSPTGP T+NPN  ++LASASFDSTV+LWD+E G    +L  H+EP
Sbjct: 533 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 576

Query: 543 VYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFAN 602
           VYSVAFSP+G+YLASGS DK +HIW+ + G ++ +Y G GGIFEVCWN  GDK+ A  ++
Sbjct: 593 VYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASD 576

Query: 603 NTVCVLDFR 608
            +VCVLD R
Sbjct: 653 GSVCVLDLR 576

[Close]

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot
Match: Q9QXE7 (F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus OX=10090 GN=Tbl1x PE=1 SV=2)

HSP 1 Score: 486.9 bits (1252), Expect = 3.4e-136
Identity = 278/609 (45.65%), Postives = 361/609 (59.28%), Query Frame = 0


Query: 3   SITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQYLE 62
           SITS E+N+LV+RYLQESGF HSAF  G E+ I++ +I+G LVPP AL++++QKGLQY+E
Sbjct: 2   SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVE 61

Query: 63  MEANLSNNETDLD-EDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELES 122
            E +++ + T  D      L  +D +  DV + RQ                       ++
Sbjct: 62  AEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQ-----------------------QA 121

Query: 123 ERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKERE 182
            R ++ +++   +      A               ++                 K+ E  
Sbjct: 122 FREKLAQQQANAAAAAAAAAATATSTAATTPAAAAQQNP--------------PKNGEAT 181

Query: 183 KQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGHT 242
              E                   G + +    +PM+I         EI  S  T+L+GH 
Sbjct: 182 VNGE-----------------ENGAHAINNHSKPMEI-----DGDVEIPPSKATVLRGHE 241

Query: 243 SEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQSG 302
           SEV I +     DLL S                    SGDSTARIW + + S+    Q  
Sbjct: 242 SEVFICAWNPVSDLLAS-------------------GSGDSTARIWNLNENSNGGSTQ-- 301

Query: 303 PLNVLVLKHV---KGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSK 362
               LVL+H     G     +KDVT+LDWN DGTLLATGSYDG ARIW+ +G L STL +
Sbjct: 302 ----LVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQ 361

Query: 363 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFAT 422
           HKGPIF+LKWNKKG+Y+L+   DKT I+WD    E KQQF FHS P LDVDW+NN +FA+
Sbjct: 362 HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFAS 421

Query: 423 SSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYV 482
            STD  I+VC++G  RP+KTF GH  EVN +KWDP+G LLASCSDD+T KIWSMKQD  V
Sbjct: 422 CSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACV 481

Query: 483 YDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREP 542
           +DL+ HSKEIYTI+WSPTGP T+NPN  ++LASASFDSTV+LWDVE G  I +L  H+EP
Sbjct: 482 HDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEP 526

Query: 543 VYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFAN 602
           VYSVAFSP+G+YLASGS DK +HIW+ + G ++ +Y G GGIFEVCWN  GDK+ A  ++
Sbjct: 542 VYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASD 526

Query: 603 NTVCVLDFR 608
            +VCVLD R
Sbjct: 602 GSVCVLDLR 526

[Close]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL
Match: A0A0A0KJM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G492270 PE=4 SV=1)

HSP 1 Score: 1100.5 bits (2845), Expect = 0.0e+00
Identity = 567/615 (92.20%), Postives = 576/615 (93.66%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TD+DEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDIDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERL-------EREKERLEREKERLERDKEHDKDRDK 180
           SERGRVREKERRESEVERGRAREKERL       EREKERLEREKERLER+KEH+KDRDK
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKEHEKDRDK 180

Query: 181 IEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSD 240
           IEKDKEREKQHENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQSCEISSSD
Sbjct: 181 IEKDKEREKQHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQSCEISSSD 240

Query: 241 VTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGS 300
           VTILQGHTSE     VC C         + P         L    SGDSTARIW +ADGS
Sbjct: 241 VTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWPIADGS 300

Query: 301 SRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR 360
           SRSG QSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR
Sbjct: 301 SRSGGQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR 360

Query: 361 STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN 420
           STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN
Sbjct: 361 STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN 420

Query: 421 VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK 480
           VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK
Sbjct: 421 VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK 480

Query: 481 QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN 540
           QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN
Sbjct: 481 QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN 540

Query: 541 GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIA 600
           GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWNKEGDKIA
Sbjct: 541 GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIA 596

Query: 601 ACFANNTVCVLDFRM 609
           ACFANNTVCVLDFRM
Sbjct: 601 ACFANNTVCVLDFRM 596

[Close]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL
Match: A0A1S3B1H4 (F-box-like/WD repeat-containing protein TBL1X OS=Cucumis melo OX=3656 GN=LOC103484814 PE=4 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 565/622 (90.84%), Postives = 574/622 (92.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRA--------------REKERLEREKERLEREKERLERDKE 180
           SERGRVREKERRESEVERGRA              REKERLEREKERLEREKERLER+KE
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKERLEREKE 180

Query: 181 HDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQS 240
           H+KDRDKIEKDKEREK HENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQS
Sbjct: 181 HEKDRDKIEKDKEREKLHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQS 240

Query: 241 CEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARI 300
           CEISSSDVTILQGHTSE     VC C         + P         L    SGDSTARI
Sbjct: 241 CEISSSDVTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARI 300

Query: 301 WTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360
           W +ADGSSRSG QSG LNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW
Sbjct: 301 WPIADGSSRSGGQSGSLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360

Query: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420
           STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL
Sbjct: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420

Query: 421 DVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480
           DVDWRNN+SFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT
Sbjct: 421 DVDWRNNISFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480

Query: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540
           AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG
Sbjct: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540

Query: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWN 600
           KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWN
Sbjct: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWN 600

Query: 601 KEGDKIAACFANNTVCVLDFRM 609
           KEGDKIAACFANNTVCVLDFRM
Sbjct: 601 KEGDKIAACFANNTVCVLDFRM 603

[Close]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL
Match: A0A5D3CNC3 (F-box-like/WD repeat-containing protein TBL1X OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004440 PE=4 SV=1)

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 564/622 (90.68%), Postives = 574/622 (92.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 73  MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 132

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 133 LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 192

Query: 121 SERGRVREKERRESEVERGRA--------------REKERLEREKERLEREKERLERDKE 180
           SERGRVREKERRESEVERGRA              REKERLEREKERLEREKERLER+KE
Sbjct: 193 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKERLEREKE 252

Query: 181 HDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQS 240
           H+KDRDKIEKDKEREK HENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQS
Sbjct: 253 HEKDRDKIEKDKEREKLHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQS 312

Query: 241 CEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARI 300
           CEISSSDVTILQGHTSE     VC C         + P         L    SGDSTARI
Sbjct: 313 CEISSSDVTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARI 372

Query: 301 WTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360
           W +ADGS+RSG QSG LNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW
Sbjct: 373 WPIADGSNRSGGQSGSLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 432

Query: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420
           STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL
Sbjct: 433 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 492

Query: 421 DVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480
           DVDWRNN+SFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT
Sbjct: 493 DVDWRNNISFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 552

Query: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540
           AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG
Sbjct: 553 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 612

Query: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWN 600
           KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWN
Sbjct: 613 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWN 672

Query: 601 KEGDKIAACFANNTVCVLDFRM 609
           KEGDKIAACFANNTVCVLDFRM
Sbjct: 673 KEGDKIAACFANNTVCVLDFRM 675

[Close]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL
Match: A0A6J1BT87 (WD40 repeat-containing protein HOS15 OS=Momordica charantia OX=3673 GN=LOC111005344 PE=4 SV=1)

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 555/608 (91.28%), Postives = 567/608 (93.26%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKC IDGNLVPPGAL+TV+QKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCPIDGNLVPPGALITVIQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLK++EKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKDREKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180
           SERGRVREKERRESE ERGRA       REKERLEREKERLERDK+HDKD++KIEKDKER
Sbjct: 121 SERGRVREKERRESEAERGRA-------REKERLEREKERLERDKDHDKDKEKIEKDKER 180

Query: 181 EKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240
           EKQHE+ TDRDMVMDQDEKVH  QGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH
Sbjct: 181 EKQHEDLTDRDMVMDQDEKVHVTQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240

Query: 241 TSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQS 300
           TSE     VC C         + P         L    SGDSTARIWT+ADGSSRSGAQS
Sbjct: 241 TSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWTIADGSSRSGAQS 300

Query: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK 360
           GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK
Sbjct: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK 360

Query: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420
           GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS
Sbjct: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420

Query: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480
           TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD
Sbjct: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480

Query: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540
           LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY
Sbjct: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540

Query: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFANNT 600
           SVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWNKEGDKIAACFANNT
Sbjct: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNT 582

Query: 601 VCVLDFRM 609
           VCVLDFRM
Sbjct: 601 VCVLDFRM 582

[Close]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL
Match: A0A6J1GF60 (WD40 repeat-containing protein HOS15-like OS=Cucurbita moschata OX=3662 GN=LOC111453387 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 553/608 (90.95%), Postives = 565/608 (92.93%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKC IDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCPIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDK+KSL K+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKKKSLPKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180
            ERGRVREKERRE EVERGRA       REKERLEREKERLERDKEHD+DRDKIEKDKER
Sbjct: 121 IERGRVREKERREIEVERGRA-------REKERLEREKERLERDKEHDRDRDKIEKDKER 180

Query: 181 EKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240
           EK HE+FTD+DMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH
Sbjct: 181 EKHHEDFTDKDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240

Query: 241 TSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQS 300
           TSE     VC C         + P         L    SGDSTARIWT+ADGS+RSGAQS
Sbjct: 241 TSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWTIADGSNRSGAQS 300

Query: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK 360
           GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNG+LRSTLSKHK
Sbjct: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGDLRSTLSKHK 360

Query: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420
           GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS
Sbjct: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420

Query: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480
           TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD
Sbjct: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480

Query: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540
           LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLI SLNGHREPVY
Sbjct: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLIYSLNGHREPVY 540

Query: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFANNT 600
           SVAFSPNGEYLASGSLDKSMHIWSLKEGKI++TYTGNGGIFEVCWNKEGDKIAACFANNT
Sbjct: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIVRTYTGNGGIFEVCWNKEGDKIAACFANNT 582

Query: 601 VCVLDFRM 609
           VCVLDFRM
Sbjct: 601 VCVLDFRM 582

[Close]

BLAST of Lsi01G009400 vs. NCBI nr
Match: XP_038882526.1 (WD40 repeat-containing protein HOS15 isoform X1 [Benincasa hispida])

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 568/608 (93.42%), Postives = 576/608 (94.74%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKS LK+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSSLKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180
           SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180

Query: 181 EKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240
           EKQHENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDIS TSTSQSCEISSSDVTILQGH
Sbjct: 181 EKQHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISMTSTSQSCEISSSDVTILQGH 240

Query: 241 TSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQS 300
           TSE     VC C         + P         L    SGDSTARIWT+ADGSSRSGAQS
Sbjct: 241 TSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWTIADGSSRSGAQS 300

Query: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK 360
           GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWS+NGELR+TLSKHK
Sbjct: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSSNGELRTTLSKHK 360

Query: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420
           GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS
Sbjct: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420

Query: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480
           TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD
Sbjct: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480

Query: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540
           LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY
Sbjct: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540

Query: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFANNT 600
           SVAFSPNGEYLASGSLDKSMH+WSLKEGKI+KTYTGNGGIFEVCWNKEGDKIAACFANNT
Sbjct: 541 SVAFSPNGEYLASGSLDKSMHVWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNT 589

Query: 601 VCVLDFRM 609
           VCVLDFRM
Sbjct: 601 VCVLDFRM 589

[Close]

BLAST of Lsi01G009400 vs. NCBI nr
Match: XP_011657882.1 (WD40 repeat-containing protein HOS15 [Cucumis sativus] >KGN48567.1 hypothetical protein Csa_002718 [Cucumis sativus])

HSP 1 Score: 1100.5 bits (2845), Expect = 0.0e+00
Identity = 567/615 (92.20%), Postives = 576/615 (93.66%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TD+DEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDIDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERL-------EREKERLEREKERLERDKEHDKDRDK 180
           SERGRVREKERRESEVERGRAREKERL       EREKERLEREKERLER+KEH+KDRDK
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKEHEKDRDK 180

Query: 181 IEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSD 240
           IEKDKEREKQHENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQSCEISSSD
Sbjct: 181 IEKDKEREKQHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQSCEISSSD 240

Query: 241 VTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGS 300
           VTILQGHTSE     VC C         + P         L    SGDSTARIW +ADGS
Sbjct: 241 VTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWPIADGS 300

Query: 301 SRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR 360
           SRSG QSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR
Sbjct: 301 SRSGGQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELR 360

Query: 361 STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN 420
           STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN
Sbjct: 361 STLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNN 420

Query: 421 VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK 480
           VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK
Sbjct: 421 VSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMK 480

Query: 481 QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN 540
           QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN
Sbjct: 481 QDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLN 540

Query: 541 GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIA 600
           GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWNKEGDKIA
Sbjct: 541 GHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIA 596

Query: 601 ACFANNTVCVLDFRM 609
           ACFANNTVCVLDFRM
Sbjct: 601 ACFANNTVCVLDFRM 596

[Close]

BLAST of Lsi01G009400 vs. NCBI nr
Match: XP_038882527.1 (WD40 repeat-containing protein HOS15 isoform X2 [Benincasa hispida])

HSP 1 Score: 1099.0 bits (2841), Expect = 0.0e+00
Identity = 566/608 (93.09%), Postives = 574/608 (94.41%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKS LK+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSSLKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180
           SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERLEREKERLERDKEHDKDRDKIEKDKER 180

Query: 181 EKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQSCEISSSDVTILQGH 240
           EKQHENFTDRDMVMDQDEKVH NQGENGVFG  EPMDIS TSTSQSCEISSSDVTILQGH
Sbjct: 181 EKQHENFTDRDMVMDQDEKVHANQGENGVFG--EPMDISMTSTSQSCEISSSDVTILQGH 240

Query: 241 TSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARIWTVADGSSRSGAQS 300
           TSE     VC C         + P         L    SGDSTARIWT+ADGSSRSGAQS
Sbjct: 241 TSE-----VCAC--------AWNPTGS------LLASGSGDSTARIWTIADGSSRSGAQS 300

Query: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHK 360
           GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWS+NGELR+TLSKHK
Sbjct: 301 GPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIWSSNGELRTTLSKHK 360

Query: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420
           GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS
Sbjct: 361 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSS 420

Query: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480
           TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD
Sbjct: 421 TDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYD 480

Query: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540
           LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY
Sbjct: 481 LREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVY 540

Query: 541 SVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWNKEGDKIAACFANNT 600
           SVAFSPNGEYLASGSLDKSMH+WSLKEGKI+KTYTGNGGIFEVCWNKEGDKIAACFANNT
Sbjct: 541 SVAFSPNGEYLASGSLDKSMHVWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNT 587

Query: 601 VCVLDFRM 609
           VCVLDFRM
Sbjct: 601 VCVLDFRM 587

[Close]

BLAST of Lsi01G009400 vs. NCBI nr
Match: XP_008440333.1 (PREDICTED: F-box-like/WD repeat-containing protein TBL1X [Cucumis melo])

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 565/622 (90.84%), Postives = 574/622 (92.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 61  LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 120

Query: 121 SERGRVREKERRESEVERGRA--------------REKERLEREKERLEREKERLERDKE 180
           SERGRVREKERRESEVERGRA              REKERLEREKERLEREKERLER+KE
Sbjct: 121 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKERLEREKE 180

Query: 181 HDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQS 240
           H+KDRDKIEKDKEREK HENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQS
Sbjct: 181 HEKDRDKIEKDKEREKLHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQS 240

Query: 241 CEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARI 300
           CEISSSDVTILQGHTSE     VC C         + P         L    SGDSTARI
Sbjct: 241 CEISSSDVTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARI 300

Query: 301 WTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360
           W +ADGSSRSG QSG LNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW
Sbjct: 301 WPIADGSSRSGGQSGSLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360

Query: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420
           STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL
Sbjct: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420

Query: 421 DVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480
           DVDWRNN+SFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT
Sbjct: 421 DVDWRNNISFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480

Query: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540
           AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG
Sbjct: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540

Query: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWN 600
           KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWN
Sbjct: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWN 600

Query: 601 KEGDKIAACFANNTVCVLDFRM 609
           KEGDKIAACFANNTVCVLDFRM
Sbjct: 601 KEGDKIAACFANNTVCVLDFRM 603

[Close]

BLAST of Lsi01G009400 vs. NCBI nr
Match: TYK12852.1 (F-box-like/WD repeat-containing protein TBL1X [Cucumis melo var. makuwa])

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 564/622 (90.68%), Postives = 574/622 (92.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY
Sbjct: 73  MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 132

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLLKEKEKDKDLDKELE 120
           LEMEANLSNN+TDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSL+K+KEKDKDLDKELE
Sbjct: 133 LEMEANLSNNDTDLDEDFSFLQPLDLITKDVHELRQIIKDKRKSLVKDKEKDKDLDKELE 192

Query: 121 SERGRVREKERRESEVERGRA--------------REKERLEREKERLEREKERLERDKE 180
           SERGRVREKERRESEVERGRA              REKERLEREKERLEREKERLER+KE
Sbjct: 193 SERGRVREKERRESEVERGRAREKERLEREKERVEREKERLEREKERLEREKERLEREKE 252

Query: 181 HDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFGGPEPMDISTTSTSQS 240
           H+KDRDKIEKDKEREK HENFTDRDMVMDQDEKVH NQGENGVFGGPEPMDISTTSTSQS
Sbjct: 253 HEKDRDKIEKDKEREKLHENFTDRDMVMDQDEKVHANQGENGVFGGPEPMDISTTSTSQS 312

Query: 241 CEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQVLFLHQGSSGDSTARI 300
           CEISSSDVTILQGHTSE     VC C         + P         L    SGDSTARI
Sbjct: 313 CEISSSDVTILQGHTSE-----VCAC--------AWNPTGS------LLASGSGDSTARI 372

Query: 301 WTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 360
           W +ADGS+RSG QSG LNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW
Sbjct: 373 WPIADGSNRSGGQSGSLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARIW 432

Query: 361 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 420
           STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL
Sbjct: 433 STNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHSGPTL 492

Query: 421 DVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 480
           DVDWRNN+SFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT
Sbjct: 493 DVDWRNNISFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDIT 552

Query: 481 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 540
           AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG
Sbjct: 553 AKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTVKLWDVELG 612

Query: 541 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIIKTYTGNGGIFEVCWN 600
           KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKI+KTYTGNGGIFEVCWN
Sbjct: 613 KLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWN 672

Query: 601 KEGDKIAACFANNTVCVLDFRM 609
           KEGDKIAACFANNTVCVLDFRM
Sbjct: 673 KEGDKIAACFANNTVCVLDFRM 675

[Close]

BLAST of Lsi01G009400 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 818.5 bits (2113), Expect = 3.5e-237
Identity = 430/637 (67.50%), Postives = 505/637 (79.28%), Query Frame = 0


Query: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60
           M+S+TSVELN+LVFRYLQESGF H+AF LGYEAGINK +IDGN+VPPGAL+  VQKGLQY
Sbjct: 1   MSSLTSVELNFLVFRYLQESGFTHAAFTLGYEAGINKSNIDGNMVPPGALIKFVQKGLQY 60

Query: 61  LEMEANLSNNETDLDEDFSFLQPLDLITKDVHELRQIIKDKR-------KSLLKEKEKDK 120
           +EMEANLSN+E D+DEDFSF QPLDLI+KDV EL+ ++++K+       K   + KE DK
Sbjct: 61  MEMEANLSNSEVDIDEDFSFFQPLDLISKDVKELQDMLREKKRKERDMEKERDRSKENDK 120

Query: 121 DLDKELESERGRVREKERRESEVERGRAREK---------ERLEREKER---------LE 180
            +++E E +R R +EK+R E + ER R REK         E++EREKER          E
Sbjct: 121 GVEREHEGDRNRAKEKDRHEKQKEREREREKLEREKEREREKIEREKEREREKMEREIFE 180

Query: 181 REKERL----ERDKEHDKDRDKIEKDKEREKQHENFTDRDMVMDQDEKVHTNQGENGVFG 240
           REK+RL    ER+ E +++R+KIE++K  EKQ  +  DR+MV+DQ +K     G  G   
Sbjct: 181 REKDRLKLEKEREIEREREREKIEREKSHEKQLGD-ADREMVIDQTDKEIAGDGSTGA-- 240

Query: 241 GPEPMDISTTSTSQSCEISSSDVTILQGHTSEVGIFSVCLCDDLLLSTSRFVPVHGIQQV 300
             EPMDI  T TSQ+  I +SDV IL+GHTSE     VC C     S S  +   G    
Sbjct: 241 --EPMDIVMTPTSQTSHIPNSDVRILEGHTSE-----VCAC---AWSPSASLLASG---- 300

Query: 301 LFLHQGSSGDSTARIWTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDG 360
                  SGD+TARIW++ +GS ++      +N L+LKH KG++NEKSKDVTTLDWNG+G
Sbjct: 301 -------SGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEG 360

Query: 361 TLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKA 420
           TLLATGS DGQARIW+ NGEL STLSKHKGPIFSLKWNKKGDYLLTGS D+TA+VWDVKA
Sbjct: 361 TLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA 420

Query: 421 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRPIKTFAGHQGEVNCVKW 480
           EEWKQQFEFHSGPTLDVDWRNNVSFATSSTD+MIY+CKIGETRP KTF GHQGEVNCVKW
Sbjct: 421 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKW 480

Query: 481 DPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLAS 540
           DPTGSLLASCSDD TAKIW++KQ  +V+DLREH+KEIYTIRWSPTGPGTNNPN+QL LAS
Sbjct: 481 DPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLAS 540

Query: 541 ASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKII 600
           ASFDSTVKLWD ELGK++CS NGHREPVYS+AFSPNGEY+ASGSLDKS+HIWS+KEGKI+
Sbjct: 541 ASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIV 600

Query: 601 KTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 609
           KTYTGNGGIFEVCWNKEG+KIAACFA+N+VCVLDFRM
Sbjct: 601 KTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLDFRM 613

[Close]

BLAST of Lsi01G009400 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-28
Identity = 71/260 (27.31%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 321 DVTTLDWNGDGTLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSC 380
           D+  +   G G L A      Q+ I        + L  H GP++S  ++  GD++L+ S 
Sbjct: 380 DMAKIGQAGSGALQAENDSSDQS-IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSA 439

Query: 381 DKTAIVWDVKAEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGETRPIKTF 440
           D T  +W  K       ++ H+ P  D  +      FA+ S D    +  +   +P++  
Sbjct: 440 DTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIM 499

Query: 441 AGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPG 500
           AGH  +V+CV+W P  + +A+ S D T ++W ++  + V     H   + ++  SP G  
Sbjct: 500 AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG-- 559

Query: 501 TNNPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKS 560
                    +AS   D T+ +WD+   + I  L GH   V+S+++S  G  LASGS D +
Sbjct: 560 -------RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCT 619

Query: 561 MHIWSLKEG-KIIKTYTGNG 579
           + +W +    K+ K    NG
Sbjct: 620 VKLWDVTSSTKLTKAEEKNG 629

[Close]

BLAST of Lsi01G009400 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 9.1e-28
Identity = 75/257 (29.18%), Postives = 127/257 (49.42%), Query Frame = 0


Query: 328 NGDGTLLATGS--YDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 387
           NG     +TG+    G   I+     L+ TL  H   I  +K++  G+ L + S DKT I
Sbjct: 10  NGVANANSTGNAGTSGNVPIYKPYRHLK-TLEGHTAAISCVKFSNDGNLLASASVDKTMI 69

Query: 388 VWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGETRP----IKTFAG 447
           +W         ++E HS    D+ W ++  +  S++D+     +I + R     +K   G
Sbjct: 70  LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDC--TLRIWDARSPYECLKVLRG 129

Query: 448 HQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTN 507
           H   V CV ++P  +L+ S S D T +IW +K  K V  ++ HS  I ++ ++  G    
Sbjct: 130 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS--- 189

Query: 508 NPNQQLVLASASFDSTVKLWDVELGKLICSLNGHREPVYSVA-FSPNGEYLASGSLDKSM 567
                 ++ SAS D + K+WD + G  + +L   + P  S A FSPNG+++   +LD ++
Sbjct: 190 ------LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 249

Query: 568 HIWSLKEGKIIKTYTGN 578
            + +   GK +K YTG+
Sbjct: 250 KLSNYATGKFLKVYTGH 254

[Close]

BLAST of Lsi01G009400 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.9e-25
Identity = 77/293 (26.28%), Postives = 136/293 (46.42%), Query Frame = 0


Query: 278 SSGDSTARIWTVADGSSRSGAQSGPLNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATG 337
           +S D T R +T+             +N  + + V+  T  ++  ++ + ++ D   + + 
Sbjct: 42  ASADKTIRTYTI-----------NTINDPIAEPVQEFTGHEN-GISDVAFSSDARFIVSA 101

Query: 338 SYDGQARIWST-NGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQ 397
           S D   ++W    G L  TL  H    F + +N + + +++GS D+T  +WDV   +  +
Sbjct: 102 SDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLK 161

Query: 398 QFEFHSGPTLDVDWRNNVSFATSST-DNMIYVCKIGETRPIKTFAGHQG-EVNCVKWDPT 457
               HS P   VD+  + S   SS+ D +  +   G    +KT    +   V+ V++ P 
Sbjct: 162 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 221

Query: 458 GSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASF 517
           G  +   + D T ++W++   K++     H    Y I  S     TN       + S S 
Sbjct: 222 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI--SSAFSVTNGKR----IVSGSE 281

Query: 518 DSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWSLKE 568
           D+ V +W++   KL+  L GH E V +VA  P    +ASGSLDK++ IW+ K+
Sbjct: 282 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316

[Close]

BLAST of Lsi01G009400 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-24
Identity = 66/232 (28.45%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 334 LATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEE 393
           LAT S D  A++W T+G L  T   H   +  + ++  G YL T S DKT  +WD+    
Sbjct: 313 LATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGA 372

Query: 394 WKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGETRPIKTFAGHQGEVNCVKWD 453
                E HS     + ++ + + A S   D++  V  +   R I  F GH   V  V + 
Sbjct: 373 ELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFS 432

Query: 454 PTGSLLASCSDDITAKIWSMKQDKYVYDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASA 513
           P G  LAS  +D   +IW ++  K +Y +  H+  +  +++         P +   LA+A
Sbjct: 433 PNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY--------EPQEGYFLATA 492

Query: 514 SFDSTVKLWDVELGKLICSLNGHREPVYSVAFSPNGEYLASGSLDKSMHIWS 565
           S+D  V +W      L+ SL GH   V S+  + +   +A+ S D+++ +W+
Sbjct: 493 SYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536

The following BLAST results are available for this feature:

BLAST of Lsi01G009400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN19	4.9e-236	67.50	WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana OX=3702 GN=HOS15 PE...	[more]
Q8BHJ5	8.6e-140	45.98	F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus OX=10090 GN=Tbl1...	[more]
Q9BZK7	1.5e-139	45.65	F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens OX=9606 GN=TBL1X...	[more]
O60907	2.0e-136	44.99	F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens OX=9606 GN=TBL1X P...	[more]
Q9QXE7	3.4e-136	45.65	F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus OX=10090 GN=Tbl1x ...	[more]

BLAST of Lsi01G009400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJM2	0.0e+00	92.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G492270 PE=4 SV=1	[more]
A0A1S3B1H4	0.0e+00	90.84	F-box-like/WD repeat-containing protein TBL1X OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5D3CNC3	0.0e+00	90.68	F-box-like/WD repeat-containing protein TBL1X OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1BT87	0.0e+00	91.28	WD40 repeat-containing protein HOS15 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GF60	0.0e+00	90.95	WD40 repeat-containing protein HOS15-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lsi01G009400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882526.1	0.0e+00	93.42	WD40 repeat-containing protein HOS15 isoform X1 [Benincasa hispida]	[more]
XP_011657882.1	0.0e+00	92.20	WD40 repeat-containing protein HOS15 [Cucumis sativus] >KGN48567.1 hypothetical ...	[more]
XP_038882527.1	0.0e+00	93.09	WD40 repeat-containing protein HOS15 isoform X2 [Benincasa hispida]	[more]
XP_008440333.1	0.0e+00	90.84	PREDICTED: F-box-like/WD repeat-containing protein TBL1X [Cucumis melo]	[more]
TYK12852.1	0.0e+00	90.68	F-box-like/WD repeat-containing protein TBL1X [Cucumis melo var. makuwa]	[more]

BLAST of Lsi01G009400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67320.1	3.5e-237	67.50	WD-40 repeat family protein	[more]
AT5G25150.1	2.4e-28	27.31	TBP-associated factor 5	[more]
AT4G02730.1	9.1e-28	29.18	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.9e-25	26.28	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G41500.1	3.6e-24	28.45	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..171
None	No IPR available	GENE3D	1.20.960.30		coord: 2..92 e-value: 1.1E-29 score: 104.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..187
None	No IPR available	PANTHER	PTHR22846:SF61	F-BOX-LIKE/WD REPEAT TBL1XR1-LIKE PROTEIN	coord: 4..608
None	No IPR available	PANTHER	PTHR22846	WD40 REPEAT PROTEIN	coord: 4..608
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 356..390 score: 11.207411
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 439..473 score: 11.523771
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 315..347 score: 9.810144
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 481..524 score: 8.676514
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 532..569 score: 13.817396
None	No IPR available	CDD	cd00200	WD40	coord: 234..564 e-value: 2.94044E-71 score: 229.529
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 551..565 score: 35.59 coord: 509..523 score: 45.17 coord: 375..389 score: 38.82
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 5..37 e-value: 1.8E-4 score: 30.9
IPR006594	LIS1 homology motif	PFAM	PF08513	LisH	coord: 8..33 e-value: 4.1E-8 score: 32.9
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 5..37 score: 9.853451
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 567..605 e-value: 0.36 score: 19.8 coord: 349..388 e-value: 4.9E-9 score: 46.0 coord: 304..347 e-value: 1.3E-5 score: 34.6 coord: 391..429 e-value: 6.3 score: 12.0 coord: 230..288 e-value: 370.0 score: 0.8 coord: 525..564 e-value: 1.8E-11 score: 54.1 coord: 474..522 e-value: 1.1E-7 score: 41.6 coord: 432..471 e-value: 9.0E-11 score: 51.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 478..522 e-value: 0.0027 score: 18.5 coord: 434..471 e-value: 9.1E-8 score: 32.7 coord: 568..603 e-value: 0.22 score: 12.4 coord: 526..564 e-value: 3.5E-8 score: 34.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 532..573 score: 18.261473
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 356..397 score: 13.716598
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 439..480 score: 14.819399
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 315..347 score: 11.744925
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 481..531 score: 10.775796
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 224..608 e-value: 2.0E-134 score: 449.8
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 314..370 e-value: 3.4E-6 score: 27.2
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 509..523
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 375..389
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 279..606

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G009400.1	Lsi01G009400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009553	embryo sac development
biological_process	GO:0016575	histone deacetylation
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0000118	histone deacetylase complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003714	transcription corepressor activity