Lsi01G009370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G009370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	zinc finger protein 7-like
Location	chr01: 7583568 .. 7591723 (-)
RNA-Seq Expression	Lsi01G009370
Synteny	Lsi01G009370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGGTGGGATTCAGAATACACCATTGCCAAAAGCTTTGAGAAGAGAAGAAGCCATTGAAATGGATTCGAGTGGGCCCGGAAGCTTTCGATTTAAGAGAGTAGAAAACCAAGGATCAACCATCAACCACCACCTAGACTTGAACCTTCGATTATGATCGCAAACTGTTTATGTATAGGTTTAATACTATTTTAGTTTTTGTACTTTTGATATTTTTTTTATTTGATCCATCTACTTTTAAAAATGTTCATTTTTAGTCTATTTGCTCTCAACTTTTGTTCATTTTACTCCTTACATTTAAAAAAAGGATTGTAATTTTGATCTCTAATTTGCACATTTTTAAAATAATTTTTTACATATAATGAATACCCATATGACTATATTTTAAAATTTTAGTGAATGAAGTGTTATGCTAAAATTTCAATTAGACCTAAAAAAAGAGGGTTTGTTTGCAAAATTTTGCCATTTTATAAAAATTTCAAACTCTTCAATTTGTATACCTTAAACATAGTTTGGTACTTAAGCGTAAGGATCTATCTATTTTCTTTTTCTTTTTTTTTCTTTTTTAAGGTTGGAGATTCAAATTCTCTCCCACATTTATTGTACTAAAAAAGTCGTGACATTATTGGAGTTGTGAATGTCATTTTCATATTATCTCTCAAAGTTGGTAATGTTTAATATATTCTCAAGCTAAGGGTTATGTACTTTAAAAAACTTTAAGAAGAAACTTGGTGTTCGAGCTTTTCTTTTAGTTTTCTTACATGACATGTATAAACATATTCCTTTCATATTGTAAATCTATGAAGAATCGAATAATTCCAAGAGATATTTAAGAAATAATTTATGCATTTTACTAAATATAATTGTGAATTATACTCTTGTGTAGTTTATGGATGACAAGAATAATAAAGTTTTGGTCCTAAGATTTGACTTTGTAGCATTTAGGTTGATAAATTTTTAAACTCCATAGTTTGGTTTGAAATAATCTCTTTTTTATTCTTTGTTATTAGTTTTTATTAAGTCTCGAGTTAATAGTTTAGAATTTGTAAGTTTGTGTTTGGAGTGTAGAGTTGTAAGATAGAGTTTCTCGTTAATTGTAAAAAAAATGAAGAGAGTAAGATGAAATTACTTGATAAATGTGAAAAGTAGAGATATAAGGAAAAGATGAAGTTCCTCGATCAATATAAAAATTAGAAAAAAAATATGGAAAGATAAAATTATTTGATATATGTGCAACTTCAATAGCGTTTACTATTGAAATTGAGTTGTTTACACTAACTTAAGAAAATGGTGGAGCAATAATGACCCCTTATTGCCTTGAGATGTTATGATATTACCAAAAAAAAAATCATTTATTACCTTATTAATTATAAAGTTATTTTGAGTGGTTGTCAGGTTTTATTCGTTAATTCTAGATTTTCTAAATTCATGCCCCAAAACACCGAAAGCAAGTTTTCTAATCCCTCATTTAACCCTCTAACATTTAACGTTATATATATATATATATATATATATATATATATGAAAGTCGAGAGAGAGAGAGAGAGAGAGAATGACTGCACTTTTTTTTATAAAAAAAATAATGTTTGAATGCTAGTAGACTAGATATGGATTTCAATAATACTTGAATGCATCCCAAGATGCAACCATCTTTATGCATTCTCTCTCATTACTCACACTAAAAAGAATTAAAATATTTCAAAATAGAAATAAGAAAATTTTGCCACATGACAAATTATGATTAACATTTTGATGGAATGTATAAAAATAAATGATGTCCAAGATATACCTTACTATTTTTCTTTCAATCACATGATGCTGTCACACAAACTAATTTTTTTTATTTTAACATTTCTACCATTAGTTGCATCTAATCGCATGCATCTCTCATCTGGTACACTGTAAAAAAAATGGAAACAATTTATTTTTTAAAAATTAAAATATTTTTCACATGTCAATATTTTTGTTTATCACACATTTTTTTTTAATTTCAATAACAAAAAGTGCATTTTTTGTAAAAATAAATTTGGTAGTAATTTAAAAGATTGATGTATGGAGTTGTAGTTAGTGAGTCTTTTCAGTCATGTGCTTTGTTTTTTCAACTCACTTTCCAATAAACTATAATGATAGAAGAATTAAATATAATAGTTCACAAAGTTGATTGAATCACTTCTATAATTTTAAGTGTAACTGATTAAATGAATATTGATCTAACTTCTCTAAAGCTTAGAGAGAAGAAAAATAAATGAAAGATATTAGAGGAAGAAGGAATCAATGGAGGGACATTTTGGTTCTACTTCAAGTTATAAAGCAGCTTTCGTTAATCGGTGAACTTCCTTCATCTAGGAATGAAAGTCATGTTAATTACCACTGAGCTAAATTTATTTTGGTTGTGATATAACATATTAAACCATTATTTTCTTCTTCTTCTTTTTTATTTTATTTTTTTTTAAGGAAAATTACATTAAACCATTCAAAGAACTAAGAAGAGAGTATTTAGGGTCATTTGAATAATAATTCGGAAGAATAATTATTTGATTAAAAAAATTGTTAAAAATGGGCCTTATGGCTCGCGCGCCATGAGAACCAAAACATTGGGCTTATCTTCTAGTGGGCCTTACCTTCTAATGGGCCTTGTCTTTACCGATTGTCTACAACCCAATAAAGTTGGTTTTCTATAAAGAGCGGTGAGTTTCGAATGTTGATGCTACGAAACAACTAACATAAAATTAAAAAATGCAATGAATAAGAAAGAATTATATAGATGTTCGTGAGGACACCTTCCTTCTAGAGTCGGAATGATAAAGAGTTAATCGTTAAGAATGTTAAAATAGTTATTAATGCTTTAAAAGAATTTAAATTTTGAAATCGAAATTTTATAGATTATGTTCGACTTTTTGAGACAGAATTGTTCCCTATAATATTAAATTGAATTTTACATCGAAAATTCATATATAAAAAAAAAGATGGTTCAAAATCCAAACTACTTTAAAATATATGGAGAGATCACGTTTTTTTGAATATTTAACTCTGACTGGAAATATAGTAATCTAAACATGTAAAATATAATTACAATGTATTAGTAAATTTGTATGAAATATAGTTATTTGACTATGCGAAATATAGTTACATCGTACTTGAAACATTTGTTGTAGGACTGCCAAGGGCAATTCAGGTATTATAAAAAAACAAAGCCCACATGCACGGTAGTATGTTTGCCATTCTTCTAAAGAAATCTAGATTTTGCCATTTTCCCAACTGACAGTTTAAAAGTTGCTATATATCATAATTTTCCTTGAAATTTTGCTATTTTAAATATTTTAGAATATTCCAGTTAAAGTTTATCAAAATCAAGGTTATTAAGTTACATTTTTAGTTTTTTTAACTTAAAAAAATATCTAATAGATGTTTAAACTTTAAATTTTGTATCCATGAATTTTAAATTTTGTTTAATATAAGTTCATTTAAAAAAAAATAAATAAATAACTAATTTACTAGATACAAAATTGGGAGTTTGAAGGCCTATTAGTCGACATTTTTAGAATCTAAGAGTTTGTAAAAAAATAAAATATTTGAGGACATATTGGACTTTTTTTAGAAAAGAAATATTTAGAAGATAAATATATACCAACTTAAAAATTCAATGAGTGAAGGTGTGATTTAACCTCAATTATAAATCTTGTAATTTGATCGATATTTTTTTAGATTAACAATAAGACGACTGAAATCATGCCTTAACCAATACTTAGATTAACATGTAATTTATATATGTATTAGATTCACACCTAATAAAACATAATTAATTATATAGGTCCATTTGGTAACTATTTAGAATTTTAAAAATTAAGCCTATAAATATCGCTTCTATTTATTGGTTTTTATATATTTTGTTGTCTAAATTTTAGGGGTGTTTTCAAAATTAAAGACAAATTTTGAAAATTATTAAAAGTGGATGTTTTTAAAAGTTTGTTTTTGTTATTGGAAATTGACTAAGAATGCAAATATTGTCTGTATAGATAATATGAAAACTATTAGTAAAAAATTTTGAGAAAATAAGACAATTTTCAAAAAAAACTAAAAATAGAAAACAAAAGGGTTATAAAAGAATCTTGATTTTTGTTAGATCATTTTTTTGGTATTTTCTTTTCTAACGAAATTGTATTTAAACCAATACTTTTCATTTTGTAAGGTGTAGACTATATAGTTTTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTCTAGGGTTAAGTATTCAAAACTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAAAAATTGTTATTTCTAACCTAAAAAGTTTTTCATGGGACAAAAGTAACCTCTTTTTTTAAAATTTCTTTTTCTAACATCTTTTTTACCTGTTCAAAATTTTATTGGAGATGTCCACACAGTGAAAAGTCTTGAATATCCTCAATTATGTACTCATTTAATTGCCTTTAATTTGCTTTCAATTATTCTTTATTGAAAAATTTCTTGGTACTTTCTATAAGGATTCTTACCGATGATTATGTGCCTTTATTCTTACGGTAATTAAAGTCAAAGTGAAAACAATTAAATGAGTACATAATTGAGAGTATTCAAGACTTTCACTGTTTGAGCCCTCCACTAAAATTCTGAAGAGGTAAAAAGGAAGTTCAAAAAATAAGTTTTTAGAAAAGAGATTATTTTTGTCCCATAAAAAATTTTTGGTTTAAATCCTATTTTAGTCCGTGAACTTTGAATCTTATTCTATTTTGGTCCCTTAACTTTAAAAAAAGTTCATTTTAGTTCCTAAACTTTTAAAAAAGTGTTTATTTTAATCTCTACTATTAAAATTATGTTAACTGTTCAGTAAAAAAGGAAGAGAGCTTGTATTTTTGCATGACTAGATTCTAGAAGTATTGAGCAAGATGAAAGTGAAGTAAAATGTCAACAACTAATACGCCAAAATACTAAACGACCAAAATTTTGAACTAAAAATGTCTTTTAAATTCTCCCGTTTTGTCACCTTATTCAAAATTGACATTCTAGATTTTTAGCGTAACTAATTTATTTGATAATCTAGTCATCAAAAAATACAAATCATCTCGCCAATTTGTTAAAGAATTAACAAAATCTTAATATAGCAAGGACCAAAATAAACCATTTTTAAAAGTTTAGAGACAAAAACGAACATTTTTTAAAGTTTAGAGACTAAAATGAACCTTTTTAAAAATTTAAGGACTAAGATGGAACATTATTCAAAGTTTGGAGACTAAAATATGATTTTAAAAAAAAAAAAATCTATTTAGGTTAGAAATAGTAATTTTCCAACCAAAAAACAACGTTCATGTGTGCTGTCGACTTTGGGACGATGGTGGGACCCGCATCTATCGATGCTTCTAGAAGACACACTAATTGAGCATTCAAAGCGACCAAAGCTTTGGTCAAAGTCGTGGGGAGGTTATTTCTTCTTTTTGTCATGAAATAAACGCGTGTTTTTTTAAATGTCAACACAAAGACCCTACTCAAACTCAATTAAAGATTATAAATAATTTTTACTTTAAATTTAGTTATATTTAAATCTTATGAAAAATATTTTTTTAACTTAAAAAATAATTAAAAAGTGTTAGTTGTGACATTCAACTAGTGGAAGTACTGTACAAGATTGAATCGAAACCACACGTTCAAATGAATGAGATTCTAAAGATATACTTAGTAGTGTTAATGGTTTTTATTTATACTAATCATGTTAGAAAATTTTTGAATTTCATTAGGAAAATTTTGTTTTTCTCCAATTTCGACGAAACTTCGAGAAATTTTTTCTAACACAAAAGTTTCGATAAATCTTGAAATTTTAAGAAAATTTTAATTTTTTCATTTTTGGAATTAACTACATCAGCTCATTTTAAATTTTTCAATTTTATGGTTCTGATTATTACACACAATTGTTGTATAACTTCACGCGCCAATGTCATTTCTGACGAATTATGAAACTTTTTTAATGGACTGATTTTTTTAATTTCCAAATTTTCTCAATTTTCAACTTCAATTCAAAACTTTCATTTGTAAAGAAATTAAATTTGAAAAACCACGAAAAAAGGAACTTATATTTATTTTTAACCTCATTCAAATTTTTTCCACTAAATCTTCACAACATTCCACTTCAAAATTGAGTTGAAGTGAAACTTTTTTTTCGATTACCATTCGAAACTTTCATTTTCACATCATTTCACTTTAAAATATTCTAAACTTTATATTATTTTGTAATTACTTTTTCTATTTCTTTTTTAAAATTTATGCTCTTAAATTGATATTTACACAAACATTTACAATATACAACAAAATGTTGCCTTACTTTATAGAAATGATGATTAAATATGGTCAATTATAGTCTAATTAAGTCAAAATCAAGGTTTTATTTACTAATTATAACAATTTCTATTGATTTCTATCCATTTCTATAAAGTTTCTCAAAATTTTCACCATCGACATCGTCTAACCTTGATACTAATAAAATTTACACTCTTTTTTTATGACTCAATCATAGAAATTCTAAAGTTCAATTTAGATTTTTTATTTTTAAAAAATATATTTATAAATACTTTAATTTCCAACATTAATCAGTTTCTTCGTTTTAATAAACCTTTTAGAACAAGTCTACAATAAAGGAATTTTTTTAAAAAAAGAACAAACACATATTCAGAAGTTGCATTATCGTACGATCATAAAAATCGGGGTTAATTAGAATTGAAATTTTCGAAAATTAATGAAAATTAATGAAAAATTATATATAGATCATAAAAAATTATTTAGTATAATTTCTTTGAAAAAAAATAGATTATTTTAGTATAATTTGTAACTTAAAAAATTATGTAGTTTGAAGAAAAGTGATGGACAACGGTGAGGTACTCTTCCTTGTCCTTATTCACTAATCAGCCACCCTAAAATATAACGTTGAAAGAAAGCGTGAGTTGATTGGTTAATGCATCACAACATTGGCCGCCATAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

mRNA sequence

ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

Coding sequence (CDS)

ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

Protein sequence

MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQVPSSYELSASAGSRHCHRQTNPAVKDTQSDLALILGPPVLSPHDMATRPGPICPFSA

Homology

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BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.0e-12
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 43  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMM 102
           + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ----RMA 101

Query: 103 LSTMAVSLNYAVA------------SLGMKAHSLPH 127
            S  A    Y  +            SLG++AHS+ H
Sbjct: 102 ASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]

BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 45  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLS 104
           +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M  
Sbjct: 46  DTKSTKCEAN----PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFG 105

Query: 105 TMAVSLNYAVASLGMKAHS-LPHNPTQVP 133
                  Y  +SLGM+AHS L H+    P
Sbjct: 106 HHHRPYTYTSSSLGMQAHSGLLHHTLSQP 128

[Close]

BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 57  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM---------- 116
           +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--YKMTLSSLPSSAFAFGHG 122

Query: 117 AVSLNYAVAS------------LGMKAHSLPHNPT 130
           +VS   ++AS            LG++AHS  H P+
Sbjct: 123 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]

BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 60  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGM 119
           R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 120 KAHSLP 126
               LP
Sbjct: 143 ALSCLP 148

[Close]

BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 41 AALSETKSKVVNSNGGSDD-RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ 96
          +++S + S   NS+   +  R+FSCNYC RKFYSSQALGGHQNAHK ER  AK+ +
Sbjct: 30 SSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR 85

[Close]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A0A0KIE9 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492290 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.8e-52
Identity = 111/135 (82.22%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NG
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKM+MLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMVMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPHNPTQ
Sbjct: 121 SLGIKPHSLPHNPTQ 134

[Close]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A1S3B3B0 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103485335 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPH PTQ
Sbjct: 121 SLGIKPHSLPHTPTQ 134

[Close]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A5D3CN29 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004420 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.9e-51
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG++ HSLPH PTQ
Sbjct: 121 SLGIQPHSLPHTPTQ 134

[Close]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A6J1BX17 (zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111005496 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 5.3e-35
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDD 60
           MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD
Sbjct: 1   MNFPNKEGQ---TGTLADDNLGKWLSLGLDRT---GPSATTAVSGTKSKLVKAGGGGGDD 60

Query: 61  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVS-LNYAVASLG 120
           +LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D KMMMLSTMAVS LNYAVASLG
Sbjct: 61  KLFSCNFCMKKFYSSQALGGHQNAHKRERGAAKRHQTDTKMMMLSTMAVSDLNYAVASLG 120

Query: 121 MKAHSLPHNPT 130
           ++ HS+ HNP+
Sbjct: 121 IRPHSVAHNPS 125

[Close]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A6J1GFC5 (zinc finger protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111453670 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.5e-34
Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FP K    HDS+     C+PD NLGQLLSLGL   +  GQPST    +TKSK+ N   
Sbjct: 8   MSFPNK----HDSNGAPIQCHPDHNLGQLLSLGLCTPE--GQPST----DTKSKLANR-- 67

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKR-QQSDPK-MMMLSTMAVSLNYA 120
            ++DRLFSCNYCM+KFYSSQALGGHQNAHK+ERGAAKR   SDP+  +MLSTMA SLNYA
Sbjct: 68  -AEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYA 127

Query: 121 VASLGMKAHSLPHNPTQ 131
           VASLG+  HSLPHNPTQ
Sbjct: 128 VASLGITPHSLPHNPTQ 131

[Close]

BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_038882248.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-53
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MNFPYK-QLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSN 60
           MNFPYK Q+QQ DSS     CNPDDNLGQLLSLGLFR D GG PST AL ETKSKVVN N
Sbjct: 1   MNFPYKNQVQQDDSSGTSIQCNPDDNLGQLLSLGLFRIDGGGHPSTTALLETKSKVVNGN 60

Query: 61  GGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAV 120
           G  D RLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAV
Sbjct: 61  G--DGRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAV 120

Query: 121 ASLGMKAHSLPHNPTQ 131
           ASLGM+ HSLPHNPTQ
Sbjct: 121 ASLGMRPHSLPHNPTQ 134

[Close]

BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_004141995.1 (zinc finger protein 4 [Cucumis sativus] >KGN48569.1 hypothetical protein Csa_004189 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 9.9e-52
Identity = 111/135 (82.22%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NG
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKM+MLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMVMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPHNPTQ
Sbjct: 121 SLGIKPHSLPHNPTQ 134

[Close]

BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_008441108.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-51
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPH PTQ
Sbjct: 121 SLGIKPHSLPHTPTQ 134

[Close]

BLAST of Lsi01G009370 vs. NCBI nr
Match: TYK12850.1 (zinc finger protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG++ HSLPH PTQ
Sbjct: 121 SLGIQPHSLPHTPTQ 134

[Close]

BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_022132698.1 (zinc finger protein 4-like [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-34
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDD 60
           MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD
Sbjct: 1   MNFPNKEGQ---TGTLADDNLGKWLSLGLDRT---GPSATTAVSGTKSKLVKAGGGGGDD 60

Query: 61  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVS-LNYAVASLG 120
           +LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D KMMMLSTMAVS LNYAVASLG
Sbjct: 61  KLFSCNFCMKKFYSSQALGGHQNAHKRERGAAKRHQTDTKMMMLSTMAVSDLNYAVASLG 120

Query: 121 MKAHSLPHNPT 130
           ++ HS+ HNP+
Sbjct: 121 IRPHSVAHNPS 125

[Close]

BLAST of Lsi01G009370 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-13
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 52  NSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLN 111
           N +  ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q      M S  A    
Sbjct: 94  NGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ-----RMASAAAFGHP 153

Query: 112 YAVA-----------SLGMKAHSLPHNPT 130
           Y  A           +LG++AHS+ H P+
Sbjct: 154 YGFAPVPFHGQYSNRTLGIQAHSMSHKPS 177

[Close]

BLAST of Lsi01G009370 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-13
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0


Query: 43  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMM 102
           + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ----RMA 101

Query: 103 LSTMAVSLNYAVA------------SLGMKAHSLPH 127
            S  A    Y  +            SLG++AHS+ H
Sbjct: 102 ASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]

BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 45  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLS 104
           +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M  
Sbjct: 46  DTKSTKCEAN----PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFG 105

Query: 105 TMAVSLNYAVASLGMKAHS-LPHNPTQVP 133
                  Y  +SLGM+AHS L H+    P
Sbjct: 106 HHHRPYTYTSSSLGMQAHSGLLHHTLSQP 128

[Close]

BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 68.2 bits (165), Expect = 8.2e-12
Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 57  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM---------- 116
           +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--YKMTLSSLPSSAFAFGHG 122

Query: 117 AVSLNYAVAS------------LGMKAHSLPHNPT 130
           +VS   ++AS            LG++AHS  H P+
Sbjct: 123 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]

BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 60  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGM 119
           R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 120 KAHSLP 126
               LP
Sbjct: 143 ALSCLP 148

The following BLAST results are available for this feature:

BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	8.0e-12	45.83	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39266	1.4e-11	50.56	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q42485	1.2e-10	47.37	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	2.0e-10	54.55	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	1.7e-09	57.14	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Lsi01G009370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIE9	4.8e-52	82.22	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492290 P...	[more]
A0A1S3B3B0	2.4e-51	80.74	zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103485335 PE=4 SV=1	[more]
A0A5D3CN29	6.9e-51	80.00	Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1BX17	5.3e-35	67.18	zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111005496 PE=4 S...	[more]
A0A6J1GFC5	4.5e-34	66.42	zinc finger protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111453670 PE=4 SV...	[more]

BLAST of Lsi01G009370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882248.1	1.4e-53	85.29	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_004141995.1	9.9e-52	82.22	zinc finger protein 4 [Cucumis sativus] >KGN48569.1 hypothetical protein Csa_004...	[more]
XP_008441108.1	4.9e-51	80.74	PREDICTED: zinc finger protein 7-like [Cucumis melo]	[more]
TYK12850.1	1.4e-50	80.00	zinc finger protein 7-like [Cucumis melo var. makuwa]	[more]
XP_022132698.1	1.1e-34	67.18	zinc finger protein 4-like [Momordica charantia]	[more]

BLAST of Lsi01G009370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	4.3e-13	47.19	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	5.7e-13	45.83	zinc finger protein 3	[more]
AT1G24625.1	9.7e-13	50.56	zinc finger protein 7	[more]
AT1G80730.1	8.2e-12	47.37	zinc-finger protein 1	[more]
AT1G66140.1	1.4e-11	54.55	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 39..113 e-value: 3.0E-8 score: 35.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..96
None	No IPR available	PANTHER	PTHR47593:SF9	ZINC FINGER PROTEIN 4-LIKE	coord: 7..144
None	No IPR available	PANTHER	PTHR47593	ZINC FINGER PROTEIN 4-LIKE	coord: 7..144
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 64..84
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 62..89 score: 11.031986
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 58..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G009370.1	Lsi01G009370.1	mRNA