Lsi01G009370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G009370
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger protein 7-like
Locationchr01: 7583568 .. 7591723 (-)
RNA-Seq ExpressionLsi01G009370
SyntenyLsi01G009370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGGTGGGATTCAGAATACACCATTGCCAAAAGCTTTGAGAAGAGAAGAAGCCATTGAAATGGATTCGAGTGGGCCCGGAAGCTTTCGATTTAAGAGAGTAGAAAACCAAGGATCAACCATCAACCACCACCTAGACTTGAACCTTCGATTATGATCGCAAACTGTTTATGTATAGGTTTAATACTATTTTAGTTTTTGTACTTTTGATATTTTTTTTATTTGATCCATCTACTTTTAAAAATGTTCATTTTTAGTCTATTTGCTCTCAACTTTTGTTCATTTTACTCCTTACATTTAAAAAAAGGATTGTAATTTTGATCTCTAATTTGCACATTTTTAAAATAATTTTTTACATATAATGAATACCCATATGACTATATTTTAAAATTTTAGTGAATGAAGTGTTATGCTAAAATTTCAATTAGACCTAAAAAAAGAGGGTTTGTTTGCAAAATTTTGCCATTTTATAAAAATTTCAAACTCTTCAATTTGTATACCTTAAACATAGTTTGGTACTTAAGCGTAAGGATCTATCTATTTTCTTTTTCTTTTTTTTTCTTTTTTAAGGTTGGAGATTCAAATTCTCTCCCACATTTATTGTACTAAAAAAGTCGTGACATTATTGGAGTTGTGAATGTCATTTTCATATTATCTCTCAAAGTTGGTAATGTTTAATATATTCTCAAGCTAAGGGTTATGTACTTTAAAAAACTTTAAGAAGAAACTTGGTGTTCGAGCTTTTCTTTTAGTTTTCTTACATGACATGTATAAACATATTCCTTTCATATTGTAAATCTATGAAGAATCGAATAATTCCAAGAGATATTTAAGAAATAATTTATGCATTTTACTAAATATAATTGTGAATTATACTCTTGTGTAGTTTATGGATGACAAGAATAATAAAGTTTTGGTCCTAAGATTTGACTTTGTAGCATTTAGGTTGATAAATTTTTAAACTCCATAGTTTGGTTTGAAATAATCTCTTTTTTATTCTTTGTTATTAGTTTTTATTAAGTCTCGAGTTAATAGTTTAGAATTTGTAAGTTTGTGTTTGGAGTGTAGAGTTGTAAGATAGAGTTTCTCGTTAATTGTAAAAAAAATGAAGAGAGTAAGATGAAATTACTTGATAAATGTGAAAAGTAGAGATATAAGGAAAAGATGAAGTTCCTCGATCAATATAAAAATTAGAAAAAAAATATGGAAAGATAAAATTATTTGATATATGTGCAACTTCAATAGCGTTTACTATTGAAATTGAGTTGTTTACACTAACTTAAGAAAATGGTGGAGCAATAATGACCCCTTATTGCCTTGAGATGTTATGATATTACCAAAAAAAAAATCATTTATTACCTTATTAATTATAAAGTTATTTTGAGTGGTTGTCAGGTTTTATTCGTTAATTCTAGATTTTCTAAATTCATGCCCCAAAACACCGAAAGCAAGTTTTCTAATCCCTCATTTAACCCTCTAACATTTAACGTTATATATATATATATATATATATATATATATATGAAAGTCGAGAGAGAGAGAGAGAGAGAGAATGACTGCACTTTTTTTTATAAAAAAAATAATGTTTGAATGCTAGTAGACTAGATATGGATTTCAATAATACTTGAATGCATCCCAAGATGCAACCATCTTTATGCATTCTCTCTCATTACTCACACTAAAAAGAATTAAAATATTTCAAAATAGAAATAAGAAAATTTTGCCACATGACAAATTATGATTAACATTTTGATGGAATGTATAAAAATAAATGATGTCCAAGATATACCTTACTATTTTTCTTTCAATCACATGATGCTGTCACACAAACTAATTTTTTTTATTTTAACATTTCTACCATTAGTTGCATCTAATCGCATGCATCTCTCATCTGGTACACTGTAAAAAAAATGGAAACAATTTATTTTTTAAAAATTAAAATATTTTTCACATGTCAATATTTTTGTTTATCACACATTTTTTTTTAATTTCAATAACAAAAAGTGCATTTTTTGTAAAAATAAATTTGGTAGTAATTTAAAAGATTGATGTATGGAGTTGTAGTTAGTGAGTCTTTTCAGTCATGTGCTTTGTTTTTTCAACTCACTTTCCAATAAACTATAATGATAGAAGAATTAAATATAATAGTTCACAAAGTTGATTGAATCACTTCTATAATTTTAAGTGTAACTGATTAAATGAATATTGATCTAACTTCTCTAAAGCTTAGAGAGAAGAAAAATAAATGAAAGATATTAGAGGAAGAAGGAATCAATGGAGGGACATTTTGGTTCTACTTCAAGTTATAAAGCAGCTTTCGTTAATCGGTGAACTTCCTTCATCTAGGAATGAAAGTCATGTTAATTACCACTGAGCTAAATTTATTTTGGTTGTGATATAACATATTAAACCATTATTTTCTTCTTCTTCTTTTTTATTTTATTTTTTTTTAAGGAAAATTACATTAAACCATTCAAAGAACTAAGAAGAGAGTATTTAGGGTCATTTGAATAATAATTCGGAAGAATAATTATTTGATTAAAAAAATTGTTAAAAATGGGCCTTATGGCTCGCGCGCCATGAGAACCAAAACATTGGGCTTATCTTCTAGTGGGCCTTACCTTCTAATGGGCCTTGTCTTTACCGATTGTCTACAACCCAATAAAGTTGGTTTTCTATAAAGAGCGGTGAGTTTCGAATGTTGATGCTACGAAACAACTAACATAAAATTAAAAAATGCAATGAATAAGAAAGAATTATATAGATGTTCGTGAGGACACCTTCCTTCTAGAGTCGGAATGATAAAGAGTTAATCGTTAAGAATGTTAAAATAGTTATTAATGCTTTAAAAGAATTTAAATTTTGAAATCGAAATTTTATAGATTATGTTCGACTTTTTGAGACAGAATTGTTCCCTATAATATTAAATTGAATTTTACATCGAAAATTCATATATAAAAAAAAAGATGGTTCAAAATCCAAACTACTTTAAAATATATGGAGAGATCACGTTTTTTTGAATATTTAACTCTGACTGGAAATATAGTAATCTAAACATGTAAAATATAATTACAATGTATTAGTAAATTTGTATGAAATATAGTTATTTGACTATGCGAAATATAGTTACATCGTACTTGAAACATTTGTTGTAGGACTGCCAAGGGCAATTCAGGTATTATAAAAAAACAAAGCCCACATGCACGGTAGTATGTTTGCCATTCTTCTAAAGAAATCTAGATTTTGCCATTTTCCCAACTGACAGTTTAAAAGTTGCTATATATCATAATTTTCCTTGAAATTTTGCTATTTTAAATATTTTAGAATATTCCAGTTAAAGTTTATCAAAATCAAGGTTATTAAGTTACATTTTTAGTTTTTTTAACTTAAAAAAATATCTAATAGATGTTTAAACTTTAAATTTTGTATCCATGAATTTTAAATTTTGTTTAATATAAGTTCATTTAAAAAAAAATAAATAAATAACTAATTTACTAGATACAAAATTGGGAGTTTGAAGGCCTATTAGTCGACATTTTTAGAATCTAAGAGTTTGTAAAAAAATAAAATATTTGAGGACATATTGGACTTTTTTTAGAAAAGAAATATTTAGAAGATAAATATATACCAACTTAAAAATTCAATGAGTGAAGGTGTGATTTAACCTCAATTATAAATCTTGTAATTTGATCGATATTTTTTTAGATTAACAATAAGACGACTGAAATCATGCCTTAACCAATACTTAGATTAACATGTAATTTATATATGTATTAGATTCACACCTAATAAAACATAATTAATTATATAGGTCCATTTGGTAACTATTTAGAATTTTAAAAATTAAGCCTATAAATATCGCTTCTATTTATTGGTTTTTATATATTTTGTTGTCTAAATTTTAGGGGTGTTTTCAAAATTAAAGACAAATTTTGAAAATTATTAAAAGTGGATGTTTTTAAAAGTTTGTTTTTGTTATTGGAAATTGACTAAGAATGCAAATATTGTCTGTATAGATAATATGAAAACTATTAGTAAAAAATTTTGAGAAAATAAGACAATTTTCAAAAAAAACTAAAAATAGAAAACAAAAGGGTTATAAAAGAATCTTGATTTTTGTTAGATCATTTTTTTGGTATTTTCTTTTCTAACGAAATTGTATTTAAACCAATACTTTTCATTTTGTAAGGTGTAGACTATATAGTTTTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTTTAGGGTTAAGTATTCAAACCTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAATAATTGTTATTTCTAACCTAAATAGATTTTTTTTTTTTTAAGGCATGTTGTTTTCCTTGTTACACATTTTCTAGGGTTAAGTATTCAAAACTATTACCAAACAACTTTACCCATAGAATAAATTATATAAAAACAAAAATAGAAAAATTGTTATTTCTAACCTAAAAAGTTTTTCATGGGACAAAAGTAACCTCTTTTTTTAAAATTTCTTTTTCTAACATCTTTTTTACCTGTTCAAAATTTTATTGGAGATGTCCACACAGTGAAAAGTCTTGAATATCCTCAATTATGTACTCATTTAATTGCCTTTAATTTGCTTTCAATTATTCTTTATTGAAAAATTTCTTGGTACTTTCTATAAGGATTCTTACCGATGATTATGTGCCTTTATTCTTACGGTAATTAAAGTCAAAGTGAAAACAATTAAATGAGTACATAATTGAGAGTATTCAAGACTTTCACTGTTTGAGCCCTCCACTAAAATTCTGAAGAGGTAAAAAGGAAGTTCAAAAAATAAGTTTTTAGAAAAGAGATTATTTTTGTCCCATAAAAAATTTTTGGTTTAAATCCTATTTTAGTCCGTGAACTTTGAATCTTATTCTATTTTGGTCCCTTAACTTTAAAAAAAGTTCATTTTAGTTCCTAAACTTTTAAAAAAGTGTTTATTTTAATCTCTACTATTAAAATTATGTTAACTGTTCAGTAAAAAAGGAAGAGAGCTTGTATTTTTGCATGACTAGATTCTAGAAGTATTGAGCAAGATGAAAGTGAAGTAAAATGTCAACAACTAATACGCCAAAATACTAAACGACCAAAATTTTGAACTAAAAATGTCTTTTAAATTCTCCCGTTTTGTCACCTTATTCAAAATTGACATTCTAGATTTTTAGCGTAACTAATTTATTTGATAATCTAGTCATCAAAAAATACAAATCATCTCGCCAATTTGTTAAAGAATTAACAAAATCTTAATATAGCAAGGACCAAAATAAACCATTTTTAAAAGTTTAGAGACAAAAACGAACATTTTTTAAAGTTTAGAGACTAAAATGAACCTTTTTAAAAATTTAAGGACTAAGATGGAACATTATTCAAAGTTTGGAGACTAAAATATGATTTTAAAAAAAAAAAAATCTATTTAGGTTAGAAATAGTAATTTTCCAACCAAAAAACAACGTTCATGTGTGCTGTCGACTTTGGGACGATGGTGGGACCCGCATCTATCGATGCTTCTAGAAGACACACTAATTGAGCATTCAAAGCGACCAAAGCTTTGGTCAAAGTCGTGGGGAGGTTATTTCTTCTTTTTGTCATGAAATAAACGCGTGTTTTTTTAAATGTCAACACAAAGACCCTACTCAAACTCAATTAAAGATTATAAATAATTTTTACTTTAAATTTAGTTATATTTAAATCTTATGAAAAATATTTTTTTAACTTAAAAAATAATTAAAAAGTGTTAGTTGTGACATTCAACTAGTGGAAGTACTGTACAAGATTGAATCGAAACCACACGTTCAAATGAATGAGATTCTAAAGATATACTTAGTAGTGTTAATGGTTTTTATTTATACTAATCATGTTAGAAAATTTTTGAATTTCATTAGGAAAATTTTGTTTTTCTCCAATTTCGACGAAACTTCGAGAAATTTTTTCTAACACAAAAGTTTCGATAAATCTTGAAATTTTAAGAAAATTTTAATTTTTTCATTTTTGGAATTAACTACATCAGCTCATTTTAAATTTTTCAATTTTATGGTTCTGATTATTACACACAATTGTTGTATAACTTCACGCGCCAATGTCATTTCTGACGAATTATGAAACTTTTTTAATGGACTGATTTTTTTAATTTCCAAATTTTCTCAATTTTCAACTTCAATTCAAAACTTTCATTTGTAAAGAAATTAAATTTGAAAAACCACGAAAAAAGGAACTTATATTTATTTTTAACCTCATTCAAATTTTTTCCACTAAATCTTCACAACATTCCACTTCAAAATTGAGTTGAAGTGAAACTTTTTTTTCGATTACCATTCGAAACTTTCATTTTCACATCATTTCACTTTAAAATATTCTAAACTTTATATTATTTTGTAATTACTTTTTCTATTTCTTTTTTAAAATTTATGCTCTTAAATTGATATTTACACAAACATTTACAATATACAACAAAATGTTGCCTTACTTTATAGAAATGATGATTAAATATGGTCAATTATAGTCTAATTAAGTCAAAATCAAGGTTTTATTTACTAATTATAACAATTTCTATTGATTTCTATCCATTTCTATAAAGTTTCTCAAAATTTTCACCATCGACATCGTCTAACCTTGATACTAATAAAATTTACACTCTTTTTTTATGACTCAATCATAGAAATTCTAAAGTTCAATTTAGATTTTTTATTTTTAAAAAATATATTTATAAATACTTTAATTTCCAACATTAATCAGTTTCTTCGTTTTAATAAACCTTTTAGAACAAGTCTACAATAAAGGAATTTTTTTAAAAAAAGAACAAACACATATTCAGAAGTTGCATTATCGTACGATCATAAAAATCGGGGTTAATTAGAATTGAAATTTTCGAAAATTAATGAAAATTAATGAAAAATTATATATAGATCATAAAAAATTATTTAGTATAATTTCTTTGAAAAAAAATAGATTATTTTAGTATAATTTGTAACTTAAAAAATTATGTAGTTTGAAGAAAAGTGATGGACAACGGTGAGGTACTCTTCCTTGTCCTTATTCACTAATCAGCCACCCTAAAATATAACGTTGAAAGAAAGCGTGAGTTGATTGGTTAATGCATCACAACATTGGCCGCCATAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

mRNA sequence

ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

Coding sequence (CDS)

ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCAGCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTTCACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTCAACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCATCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTCCCTTTTCCGCGTAG

Protein sequence

MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQVPSSYELSASAGSRHCHRQTNPAVKDTQSDLALILGPPVLSPHDMATRPGPICPFSA
Homology
[Close]
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.0e-12
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 43  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMM 102
           + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ----RMA 101

Query: 103 LSTMAVSLNYAVA------------SLGMKAHSLPH 127
            S  A    Y  +            SLG++AHS+ H
Sbjct: 102 ASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0 

Query: 45  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLS 104
           +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M  
Sbjct: 46  DTKSTKCEAN----PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFG 105

Query: 105 TMAVSLNYAVASLGMKAHS-LPHNPTQVP 133
                  Y  +SLGM+AHS L H+    P
Sbjct: 106 HHHRPYTYTSSSLGMQAHSGLLHHTLSQP 128

[Close]
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 0 

Query: 57  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM---------- 116
           +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--YKMTLSSLPSSAFAFGHG 122

Query: 117 AVSLNYAVAS------------LGMKAHSLPHNPT 130
           +VS   ++AS            LG++AHS  H P+
Sbjct: 123 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0 

Query: 60  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGM 119
           R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 120 KAHSLP 126
               LP
Sbjct: 143 ALSCLP 148

[Close]
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 41 AALSETKSKVVNSNGGSDD-RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ 96
          +++S + S   NS+   +  R+FSCNYC RKFYSSQALGGHQNAHK ER  AK+ +
Sbjct: 30 SSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR 85

[Close]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A0A0KIE9 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492290 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.8e-52
Identity = 111/135 (82.22%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NG
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKM+MLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMVMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPHNPTQ
Sbjct: 121 SLGIKPHSLPHNPTQ 134

[Close]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A1S3B3B0 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103485335 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.4e-51
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPH PTQ
Sbjct: 121 SLGIKPHSLPHTPTQ 134

[Close]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A5D3CN29 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004420 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.9e-51
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG++ HSLPH PTQ
Sbjct: 121 SLGIQPHSLPHTPTQ 134

[Close]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A6J1BX17 (zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111005496 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 5.3e-35
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDD 60
           MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD
Sbjct: 1   MNFPNKEGQ---TGTLADDNLGKWLSLGLDRT---GPSATTAVSGTKSKLVKAGGGGGDD 60

Query: 61  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVS-LNYAVASLG 120
           +LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D KMMMLSTMAVS LNYAVASLG
Sbjct: 61  KLFSCNFCMKKFYSSQALGGHQNAHKRERGAAKRHQTDTKMMMLSTMAVSDLNYAVASLG 120

Query: 121 MKAHSLPHNPT 130
           ++ HS+ HNP+
Sbjct: 121 IRPHSVAHNPS 125

[Close]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match: A0A6J1GFC5 (zinc finger protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111453670 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.5e-34
Identity = 91/137 (66.42%), Postives = 104/137 (75.91%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FP K    HDS+     C+PD NLGQLLSLGL   +  GQPST    +TKSK+ N   
Sbjct: 8   MSFPNK----HDSNGAPIQCHPDHNLGQLLSLGLCTPE--GQPST----DTKSKLANR-- 67

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKR-QQSDPK-MMMLSTMAVSLNYA 120
            ++DRLFSCNYCM+KFYSSQALGGHQNAHK+ERGAAKR   SDP+  +MLSTMA SLNYA
Sbjct: 68  -AEDRLFSCNYCMKKFYSSQALGGHQNAHKRERGAAKRHHHSDPRTTIMLSTMAASLNYA 127

Query: 121 VASLGMKAHSLPHNPTQ 131
           VASLG+  HSLPHNPTQ
Sbjct: 128 VASLGITPHSLPHNPTQ 131

[Close]
BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_038882248.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-53
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 0 

Query: 1   MNFPYK-QLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSN 60
           MNFPYK Q+QQ DSS     CNPDDNLGQLLSLGLFR D GG PST AL ETKSKVVN N
Sbjct: 1   MNFPYKNQVQQDDSSGTSIQCNPDDNLGQLLSLGLFRIDGGGHPSTTALLETKSKVVNGN 60

Query: 61  GGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAV 120
           G  D RLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAV
Sbjct: 61  G--DGRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAV 120

Query: 121 ASLGMKAHSLPHNPTQ 131
           ASLGM+ HSLPHNPTQ
Sbjct: 121 ASLGMRPHSLPHNPTQ 134

[Close]
BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_004141995.1 (zinc finger protein 4 [Cucumis sativus] >KGN48569.1 hypothetical protein Csa_004189 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 9.9e-52
Identity = 111/135 (82.22%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NG
Sbjct: 1   MNFPYKQAQQDDSSGTSIQCNPDDNLGQLLSLGLVRFDDGHPASNTSFSETKSRVVNGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKM+MLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMVMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPHNPTQ
Sbjct: 121 SLGIKPHSLPHNPTQ 134

[Close]
BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_008441108.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-51
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG+K HSLPH PTQ
Sbjct: 121 SLGIKPHSLPHTPTQ 134

[Close]
BLAST of Lsi01G009370 vs. NCBI nr
Match: TYK12850.1 (zinc finger protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNG 60
           M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NG
Sbjct: 1   MSFPYKQAQQDDSSRTSIQCNPDDNLGQLLSLGLVRSSDGHMGSNASVSETKSRVINGNG 60

Query: 61  GSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120
           G DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQSDPKMMMLSTMAVSLNYAVA
Sbjct: 61  G-DDRLFSCNYCMRKFYSSQALGGHQNAHKRERGAAKRQQSDPKMMMLSTMAVSLNYAVA 120

Query: 121 SLGMKAHSLPHNPTQ 131
           SLG++ HSLPH PTQ
Sbjct: 121 SLGIQPHSLPHTPTQ 134

[Close]
BLAST of Lsi01G009370 vs. NCBI nr
Match: XP_022132698.1 (zinc finger protein 4-like [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-34
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 0 

Query: 1   MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDD 60
           MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD
Sbjct: 1   MNFPNKEGQ---TGTLADDNLGKWLSLGLDRT---GPSATTAVSGTKSKLVKAGGGGGDD 60

Query: 61  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVS-LNYAVASLG 120
           +LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D KMMMLSTMAVS LNYAVASLG
Sbjct: 61  KLFSCNFCMKKFYSSQALGGHQNAHKRERGAAKRHQTDTKMMMLSTMAVSDLNYAVASLG 120

Query: 121 MKAHSLPHNPT 130
           ++ HS+ HNP+
Sbjct: 121 IRPHSVAHNPS 125

[Close]
BLAST of Lsi01G009370 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-13
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 0 

Query: 52  NSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLN 111
           N +  ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q      M S  A    
Sbjct: 94  NGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ-----RMASAAAFGHP 153

Query: 112 YAVA-----------SLGMKAHSLPHNPT 130
           Y  A           +LG++AHS+ H P+
Sbjct: 154 YGFAPVPFHGQYSNRTLGIQAHSMSHKPS 177

[Close]
BLAST of Lsi01G009370 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-13
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 43  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMM 102
           + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQ----RMA 101

Query: 103 LSTMAVSLNYAVA------------SLGMKAHSLPH 127
            S  A    Y  +            SLG++AHS+ H
Sbjct: 102 ASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]
BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0 

Query: 45  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLS 104
           +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M  
Sbjct: 46  DTKSTKCEAN----PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR--MFG 105

Query: 105 TMAVSLNYAVASLGMKAHS-LPHNPTQVP 133
                  Y  +SLGM+AHS L H+    P
Sbjct: 106 HHHRPYTYTSSSLGMQAHSGLLHHTLSQP 128

[Close]
BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 68.2 bits (165), Expect = 8.2e-12
Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 0 

Query: 57  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM---------- 116
           +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQY--YKMTLSSLPSSAFAFGHG 122

Query: 117 AVSLNYAVAS------------LGMKAHSLPHNPT 130
           +VS   ++AS            LG++AHS  H P+
Sbjct: 123 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]
BLAST of Lsi01G009370 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0 

Query: 60  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGM 119
           R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 120 KAHSLP 126
               LP
Sbjct: 143 ALSCLP 148

The following BLAST results are available for this feature:
BLAST of Lsi01G009370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q392628.0e-1245.83Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
Q392661.4e-1150.56Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
Q424851.2e-1047.37Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
Q392632.0e-1054.55Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
Q392611.7e-0957.14Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1[more]
BLAST of Lsi01G009370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIE94.8e-5282.22C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492290 P... [more]
A0A1S3B3B02.4e-5180.74zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103485335 PE=4 SV=1[more]
A0A5D3CN296.9e-5180.00Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1BX175.3e-3567.18zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111005496 PE=4 S... [more]
A0A6J1GFC54.5e-3466.42zinc finger protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111453670 PE=4 SV... [more]
BLAST of Lsi01G009370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882248.11.4e-5385.29zinc finger protein 7-like [Benincasa hispida][more]
XP_004141995.19.9e-5282.22zinc finger protein 4 [Cucumis sativus] >KGN48569.1 hypothetical protein Csa_004... [more]
XP_008441108.14.9e-5180.74PREDICTED: zinc finger protein 7-like [Cucumis melo][more]
TYK12850.11.4e-5080.00zinc finger protein 7-like [Cucumis melo var. makuwa][more]
XP_022132698.11.1e-3467.18zinc finger protein 4-like [Momordica charantia][more]
BLAST of Lsi01G009370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10970.14.3e-1347.19C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G25160.15.7e-1345.83zinc finger protein 3 [more]
AT1G24625.19.7e-1350.56zinc finger protein 7 [more]
AT1G80730.18.2e-1247.37zinc-finger protein 1 [more]
AT1G66140.11.4e-1154.55zinc finger protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 39..113
e-value: 3.0E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96
NoneNo IPR availablePANTHERPTHR47593:SF9ZINC FINGER PROTEIN 4-LIKEcoord: 7..144
NoneNo IPR availablePANTHERPTHR47593ZINC FINGER PROTEIN 4-LIKEcoord: 7..144
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 64..84
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 62..89
score: 11.031986
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 58..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G009370.1Lsi01G009370.1mRNA