Lsi01G009330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G009330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	U-box domain-containing protein 4-like
Location	chr01: 7536321 .. 7543714 (-)
RNA-Seq Expression	Lsi01G009330
Synteny	Lsi01G009330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTCTGGCTCATGAAAAGTTGAAAGAGAATGCTGAACAAGTCCAAATCACAGGAGAGGCTGATATCATAACTCACAGACATGAGCACATAATTACACTACAGAAATCCCATAGCTGTGGCTCAGTTCCAATAGTAGACACTAATATAATACCAAATGACATTAGAAAGGCACAAATTTCAAGTTTATCCACGATAAGCAACAACAAGAAATTGATTGATTCTACGAAGTTAGAGAACGTGAAACTAGTTGTTACTCCAGAAAAGTTGAATTTAGGTGATAGGAATCATCTTCCCACTCGCTCTAGTTCTCAATTAGTCAATTCGGCAGATGGTGTGGCTAAAAATGGGGACAAGTTGGATTTCGGAGGGTTGCCCGTGACAAGCTCAGAAAATCACCCCAATATGACGTTAGATGGAAAATCTCAAGTTCATGATATTGTTTTCTCTGACTCTAATGTTAAGCCTACTTTTTCACAAGTTATATCTAGAGATACAAGTGACACCAATTCGCCAGTGTCACCAATTGGATCAGCAGGTCGCACCAGGGATACTTCTCAGAAAGTAAAATTAGAATCACCAGCTTCTGTGACTCTATCCCTCTTGCAAGTCGACCCAGAATTCCCACTCAGATTATTGGGGGAAAGAAAAAGTGATATAATTGGGCAACAGCCACACAAACTTCCTGAAATTGTTTGTTCTTCTGTGATTAAAAGTGTTGAAGCTGGAATTCAGAAGTTGGTCGAGGACTTGAGTAGCAATTCACTTGAAACTGTAAGAACTGCAATAGCTGAACTCCGAAGTCTTGCCAGGCATAATACTGAAAACCGGATTATGATTGCCGAACATGGAGCAATCACCTTTTTGGTCAAATTGATGTATTCTACAGATGCAATAATCCAAGAGCATGCTGTTACGACACTTCTCAATCTATCAATCCACAGCGACCACAAAATCACCATTGCTCAGGCCAATATAATTGAACCTCTGATTCACGTCCTTGATACAGGAAGCCCTGAGGCAAGGGAGAACTCAGCTGCCACTTTCTTTAGCCTTGCTATGGTCGTGGAAAACAGGGTAAACATTGGGAGGTCTGGGGCCATTGGGCCTTTGGTTGAACTACTAGGTAATGGGACTCCTAGGGGAAGGAAAGATGCAACAACTGCATTGTTTTATCTGTCTATGCTTCCAGAGAACAAGGTCAAGATTGTGCAAGCTGGAGCTGTTAAGCATCTCGTGGAGTTGATGGATCCATCAGTTGGAATGGTTGACAAGACAGTTGCTGTTCTAGCAAATCTTGCTACAATTCAGGAGGGAAAGGTTGAAATTGGTAGGGTGGGTGGGATCCCTGTGTTGGTCGAGGCTATTGAATTGGGTTCTGCTAGAGGAAAAGAGAATGCAGCTGCTGCACTGTTACGGGTCTGCTCAGCCTCTAGTAAATTTTGCATAATGGCTCTCCAAGAAGGAGTTATCCCACCCTTAGTGGCACTGTCACAATCTGGAACTCGGAGGGCCAAGGATAAGGTACTCACTGTGATAAATTCTGTCCTTCTACAGTTCCAATTTTGAAAAAGATTGTTAATTTGAAAATAAAATTGTTATTTCAGGCTCAGGAACTGCTTAACCTCCTCAGAAAGCATGTGCGTAGTTGTTGAAAAACACTAATTTTGAGGCTCAGGATCTGCTTAACATCTTCAGAAAGCATGTGAATAGTAATGTTGAAAGCCACTAATCTTGAAGTATGCGTGACATTAACCTTGGATGTCGCTGCTGTTGAAGGGGGCATGTAAATTTTCATGCCGCAATAGTATTACATCAGGTATCTGCGTAGAATATTTTTCTTGATTTGTAAATAGATGATGGAAATGCAGTAAAATTCATTCAGAAAAATGAAAAAGTAGAAAGGCCAGAAGTAATTTCGAACTAGTGTATCAATTTGATTGTTTCATATTGAAAAACTTCCATCTAGATGTGTTGGAAAAATACTTCTGCTTGGGGTTGCAGATGAATCATCTACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCCCCTCCGGGGTCTGCTTGGCTGCTTGTCTCCTCATTGGCTATGAATGAATTCATATCTCTGGCTGATTGGATTTTTAGTGCCCAACGATTGGTGTTAACTATTAATTAATATCTCTTTGTGAGGGATTTATATTTGTCATATGGATGGATCATTTCTTTAAGAAAATCAAAATTTTCTTATGGAAGCTTAGCCTCATAATTGTTAATACTGTTGATCATCTACAACATCGTATACGGTATACCTTATATGTCTATATCTCCATCTTGGTGCCTCATGTTTCAAGGCCATTTTGAGGCCCCAGCTTATATGTTTTTCCATTGTTCTTTGCTCCTCGTTTTTTACATATTATTTTGGAAGCTTTTGATCGGTCGTTGGCATGTTCTAATAGCATGTTTGGCTTTCTTTTGGACTTTATGGAAAGAGTGCAATAGTCGTCCTATTAGAGACTCTTTTTTATCTTTTGATAGATTCTTGGATTTGGTTCCCTTTATAGCTTTGTATTGGTGTAAAACTAGGCACCCTTTTAATCACTTTAATCTTTTTTAGTTTTCAATTGAAAATCTATTTTGTAATCACCAATAGGTACTTTGGAGTTTCTTCTTATCTCATTCAGTGAAATGTTTCTTTATCTATTAATTAACAGAGATCATTAATCAATTACTTCGTTGTAATTTCCCAGAACTTATACTGTGTACTTACTGCTCATATATGTCTTCATCAGTAGAGAATCAACTAGATAGATAAATTGATGATATCTTGTTTTAGGTGGTAGCTGATGGTTGCTGTGCCTTTAATATCAAGGAACTAAGATGAGCAACCAAAGCTGATCCCCCAGCATCCACAAACAGTAACAGATCCTCCATTATTGATGCCATATCATTAACTCAGTAAGACAAGAATTATGTTTGCTTCCTAGTTGGGAGGGACTGGATGCTTTATCAGGAGTGAACATTTGGATGTAGATCCATTAGGGTAGGATTGCTTTTCCACTAGGCTTGTAACTTCTTGAGTAGTATTGTTTGATTTAAATCCCTTTTGTCTGAGTGATGTATTTAAAATAATTGTTTTATGTGAAATTCAGAAATCAAAATAGTTTATTTTTAAAAGTATGATGATTTAAGTTTAAATATGTTGTTCTTCTCATTTAGCTTAATTGTTTGCTAAACAATTAAAATCAGATAGATAGGCTTTGTTTATGTTTAGTTAAATTCACATGAAAGATCATTAATGTTACAAATCCCGTGTTTCTTGTAATCAATCTCGTTGAATTGACCCAATAAGTTTCTTTTTGGGGGTTTTCATATATGCGACAAGATGTGAACGGTTAAATCTACTTATTTTTGTTTTTAATTTTTTTTAAACAAACCCTATATTTATATATATTTGAAATTTGCAATGCTTACACATGTTACAATAGATACTAAATTAAAGAATAAAAGAAAATTAGAAACGAAATTGTTACTAAATATAGGATAAATTTCTAGAGTGAATATAAATAGAATTTTCTTAAACTTTAAAAATGTTTAATACATTTTTTAATCTTCAATTTTATGTTTAAGATAACCTAATGTCAATGCATTTAATGTATCTCCAAAAACTTGAGAGCAAGCCACATCTTAAATACAAGGTTAAATTATAAGAAATGTCCCTGAATTATACACTTTGTGTCAGAAATATTTTTGTTTAAAAAATATCTCTAAATTTTAAAGTTTGAAAAATACCCTAAACTCTAAAAAGTTCAAAAATACCTTCACAGTAAGTTTATGAATAGAAACTGTTAATACATCGTTGTAAAAATAACTTTAAAATAAAAAGAAAGAAGTTTAAAATTGCTCCTAACATTAATATGATGATCAATTTATTTGAAGTTTTTAGTTCGAAAAGAATAAACTTTAAAACAAATTATAAAGATATTTTGATTTTTTTTCATATACCAATTATCAATTTACACCAATTTTCTCACCAACCAAAATTTTAAGTTAAAATATAAAATTCCATAAATTATGGAATTTTATATTTTAACTTAAAATTTTGGTTGGTGAGAAAATTTGTGTAAGTTAATTAGAAAATTAAGAGAAAATAAGAGTATTTATATGAAAAAAAATTAAGATATCTATATAATTTGTTTTAAAATTCATTCTTTTCGAACTTAAGAAAACTTCAAATAAATTGATCACTATATTAATGTTAAGAGTAATTATAAACTTTTTTTTAATTTTAAAGTTATTTTTGCAACGAAATGTTAACAATTTATATTTATAGACTTACGGTGAAGGTACTTTTGAACTTTTTTTTTAGTGGGGGATATTTTTTAAACTTTTGAAAAGTTAGAGGTATTTTTGAAACAAAACTTTAATGGTTTCCATCCAAAACTAACTACGGGTATTTTGAACTCGTTTTGAAAGTTTAAGGGTATTTTTTAAAGTTAGAGGGTATTTTTTACACAAAGTGTTTACAGTATTTTTTTTTTTTTTTTTTATAATGGAGCCTAAATACAATCTACTCTATCCTATGACGTTGGTGTGTTCATATGAATATTTTTATATTGTTATTTAAAAGTGATAAAACTTGACGTCCTTAAGAAAAAAAACCACTCTATTATGTGGTGTGGTGTGTACATAAGAATATTTTTAAATAGTTATTTGTAGGTCAAAGTGAGCGTATTCATTTAAAAATAAATAAATAAAATTTCTCGTTGAAAAAAAGGTCGTTCTTCAGGCTAGTTGCAAAAGTAATATCCTATTAAAATTTGAACTGTAGCTCGTTTTCTATATTAAAATAGAGAGATCGAAGATGATGACAAAACCTTGAGGGGGAGCCATCCACATCTTAGAAAAATCACCTCGCGGTTTGGTGGAGGTTGTTGGGGCCTTAGAGTAATGGCGGTAATTTACCCATTTATTAATAATCAACGAACACACCCAATTGTATATTTGTAATGGTTTCCTCAAGAAATTTAAAAAACAAAACAGTTTAGAAGCTGCTACGGAAAGGAATTTAAGAAGAAGGGGAAGAAGGCAAACACGAATTTCAGGAGGTCAGCATCATTCTTCTCTACTCGCAGGACTTTGTTTTAATTTGGGTAATTCTTATTCTTCTCTAATTTCTTCTCCTTTATCAAGTTTTTGTTTCTTGAAGTTTTTCCCTCGTTTGTTTTCTCCCTTGACCCCTTCGAAGTATTGTCTCCATATCTCAAATCTTACCTATGGTGCTATAATCAAGTCGTCAAACGTTTTTTCTGCTAAACTTTTGCAACGCAAGAAAATTGAGTTTAAGAACTTCTGCTACTATCATCTGTTTCCTCTTCAGCTCGAATAAAGAAGAAAAAACTGCCACATGCGAGCAAATTTGTTCTGCATATGACCCTTTTTAGATTATAGTCTTTCATGCGCTTTTGGTAAGATGGGTTTTGCACTACTTGATTTTATTTAGTTCAAGAAACACATTAAGTAAGTTGGAGTTGTCAATAGCTGCACTTATTTGCTAGCACTTCTGATGATGTCCATGCTTTTATGGATAAGTACTCCTTGTTTTTTTTTTTTTTTATTGCATGCGTCATGTTTTTCCTCCATTTGAATTGTGAATGATATTCTGGCTTTACTATTTTTGAATTTGGTATGAGTATGATTGATTTGGGTCTTTGCTTTTCAGAACAAACTATAACTAAAAAGCTGAAATGATGAGAAAATTGATTAAGAAATGGCTTCTAATATTCTCAACTTTATATTTTCTTGACTGGACTATGGTTTGATGATTTATGGGAACTTTTAGAAAACAACTGTTTCTGTAACATTATTAAAAGCTGAGGAAGATATGGATATTTTTCAAGTTCATACTTGAGAAAGTTGTTCAACTGTCGAATAGTTTCATATGGGGTCTTTACTGTTCAATTGATGAATGTGAGTCATGAGTTCATAATGTTTTCCTGAATGGTTTGTTCGTGCAATCATTTACTTCCATTTGCTTGTGGATTCTTCAGACACTGCTTGGATATTGGACCTGCCTCTGATCAAGCTATTACAGAAATTAGGCCCACCAAGTGTCAGTGGGCTAATATCTTGCACTAAGGAATTCTTGGGAGGTAAAATCTGAGCCATCTACTGACTTGACTTTGATCATACTACTGACAGAAATAAAAATACCCGTCCTCGAATGTTGATAGCAAAAGCACAAAGTCAAATATCATGCCAGCAACCATCTGAAAGGATGGTTCATGAAATAGTATCTTATCCTGTACTGGAGGAGGCTAGATGTGATCACACTGGCATTAAAGCAAAAGTTCGAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGACACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCGAATAATCGGAGGGTGATTGCAGACTATGGGGCAATTACCCTTTTGGTCAAATTGCTAAATTCTACGGACACTAAGATTCAAGAGAATGCTGTTACAGTACTTGTGAACTTATCAATAGACAATAATTGCAAAACTATGATTGTTCAGGCCAATGCAATTGAGCCTTTGATTCACGTTCTTCAAACTGGAAGCCCGGAGGCAAAGGAGAACTCAGCTGCTACTCTAGGTAGTCTTTCCGTGGTTGATGATAACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGGATGGTACTCCTCAGGGAAAGAAAGATGCAGCTACAGCACTGTTTAATTTGTCTTTGCTTTCCGAAAACAAGGAAAAGATTGTGGAGGCTGGCTCAATCAAGCATCTTGTGAAGTTGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCAATAGATGAAGGAAGGATCGAAATTGTACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAGTATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTAGTAGATTTTGCATCATGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGCACGGGCCAAGGAAAAGGTACACGACTGCACTGAATTGTGTTTTCCTAAGATTCCAAATTCGCAATAG

mRNA sequence

ATGGAAATTCTGGCTCATGAAAAGTTGAAAGAGAATGCTGAACAAGTCCAAATCACAGGAGAGGCTGATATCATAACTCACAGACATGAGCACATAATTACACTACAGAAATCCCATAGCTGTGGCTCAGTTCCAATAGTAGACACTAATATAATACCAAATGACATTAGAAAGGCACAAATTTCAAGTTTATCCACGATAAGCAACAACAAGAAATTGATTGATTCTACGAAGTTAGAGAACGTGAAACTAGTTGTTACTCCAGAAAAGTTGAATTTAGGTGATAGGAATCATCTTCCCACTCGCTCTAGTTCTCAATTAGTCAATTCGGCAGATGGTGTGGCTAAAAATGGGGACAAGTTGGATTTCGGAGGGTTGCCCGTGACAAGCTCAGAAAATCACCCCAATATGACGTTAGATGGAAAATCTCAAGTTCATGATATTGTTTTCTCTGACTCTAATGTTAAGCCTACTTTTTCACAAGTTATATCTAGAGATACAAGTGACACCAATTCGCCAGTGTCACCAATTGGATCAGCAGGTCGCACCAGGGATACTTCTCAGAAAGTAAAATTAGAATCACCAGCTTCTGTGACTCTATCCCTCTTGCAAGTCGACCCAGAATTCCCACTCAGATTATTGGGGGAAAGAAAAAGTGATATAATTGGGCAACAGCCACACAAACTTCCTGAAATTGTTTGTTCTTCTGTGATTAAAAGTGTTGAAGCTGGAATTCAGAAGTTGGTCGAGGACTTGAGTAGCAATTCACTTGAAACTGTAAGAACTGCAATAGCTGAACTCCGAAGTCTTGCCAGGCATAATACTGAAAACCGGATTATGATTGCCGAACATGGAGCAATCACCTTTTTGGTCAAATTGATGTATTCTACAGATGCAATAATCCAAGAGCATGCTGTTACGACACTTCTCAATCTATCAATCCACAGCGACCACAAAATCACCATTGCTCAGGCCAATATAATTGAACCTCTGATTCACGTCCTTGATACAGGAAGCCCTGAGGCAAGGGAGAACTCAGCTGCCACTTTCTTTAGCCTTGCTATGGTCGTGGAAAACAGGGTAAACATTGGGAGGTCTGGGGCCATTGGGCCTTTGGTTGAACTACTAGGTAATGGGACTCCTAGGGGAAGGAAAGATGCAACAACTGCATTGTTTTATCTGTCTATGCTTCCAGAGAACAAGGTCAAGATTGTGCAAGCTGGAGCTGTTAAGCATCTCGTGGAGTTGATGGATCCATCAGTTGGAATGGTTGACAAGACAGTTGCTGTTCTAGCAAATCTTGCTACAATTCAGGAGGGAAAGGTTGAAATTGGTAGGGTGGGTGGGATCCCTGTGTTGGTCGAGGCTATTGAATTGGGTTCTGCTAGAGGAAAAGAGAATGCAGCTGCTGCACTGTTACGGGTCTGCTCAGCCTCTAGTAAATTTTGCATAATGGCTCTCCAAGAAGGAGTTATCCCACCCTTAGTGGCACTGTCACAATCTGGAACTCGGAGGGCCAAGGATAAGGCTCAGGAACTGCTTAACCTCCTCAGAAAGCATGGGGCATGTAAATTTTCATGCCGCAATAGTATTACATCAGACACTGCTTGGATATTGGACCTGCCTCTGATCAAGCTATTACAGAAATTAGGCCCACCAAGTGTCAGTGGGCTAATATCTTGCACTAAGGAATTCTTGGGAGTATCTTATCCTGTACTGGAGGAGGCTAGATGTGATCACACTGGCATTAAAGCAAAAGTTCGAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGACACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCGAATAATCGGAGGGTGATTGCAGACTATGGGGCAATTACCCTTTTGGTCAAATTGCTAAATTCTACGGACACTAAGATTCAAGAGAATGCTGTTACAGTACTTGTGAACTTATCAATAGACAATAATTGCAAAACTATGATTGTTCAGGCCAATGCAATTGAGCCTTTGATTCACGTTCTTCAAACTGGAAGCCCGGAGGCAAAGGAGAACTCAGCTGCTACTCTAGGTAGTCTTTCCGTGGTTGATGATAACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGGATGGTACTCCTCAGGGAAAGAAAGATGCAGCTACAGCACTGTTTAATTTGTCTTTGCTTTCCGAAAACAAGGAAAAGATTGTGGAGGCTGGCTCAATCAAGCATCTTGTGAAGTTGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCAATAGATGAAGGAAGGATCGAAATTGTACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAGTATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTAGTAGATTTTGCATCATGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGCACGGGCCAAGGAAAAGGTACACGACTGCACTGAATTGTGTTTTCCTAAGATTCCAAATTCGCAATAG

Coding sequence (CDS)

ATGGAAATTCTGGCTCATGAAAAGTTGAAAGAGAATGCTGAACAAGTCCAAATCACAGGAGAGGCTGATATCATAACTCACAGACATGAGCACATAATTACACTACAGAAATCCCATAGCTGTGGCTCAGTTCCAATAGTAGACACTAATATAATACCAAATGACATTAGAAAGGCACAAATTTCAAGTTTATCCACGATAAGCAACAACAAGAAATTGATTGATTCTACGAAGTTAGAGAACGTGAAACTAGTTGTTACTCCAGAAAAGTTGAATTTAGGTGATAGGAATCATCTTCCCACTCGCTCTAGTTCTCAATTAGTCAATTCGGCAGATGGTGTGGCTAAAAATGGGGACAAGTTGGATTTCGGAGGGTTGCCCGTGACAAGCTCAGAAAATCACCCCAATATGACGTTAGATGGAAAATCTCAAGTTCATGATATTGTTTTCTCTGACTCTAATGTTAAGCCTACTTTTTCACAAGTTATATCTAGAGATACAAGTGACACCAATTCGCCAGTGTCACCAATTGGATCAGCAGGTCGCACCAGGGATACTTCTCAGAAAGTAAAATTAGAATCACCAGCTTCTGTGACTCTATCCCTCTTGCAAGTCGACCCAGAATTCCCACTCAGATTATTGGGGGAAAGAAAAAGTGATATAATTGGGCAACAGCCACACAAACTTCCTGAAATTGTTTGTTCTTCTGTGATTAAAAGTGTTGAAGCTGGAATTCAGAAGTTGGTCGAGGACTTGAGTAGCAATTCACTTGAAACTGTAAGAACTGCAATAGCTGAACTCCGAAGTCTTGCCAGGCATAATACTGAAAACCGGATTATGATTGCCGAACATGGAGCAATCACCTTTTTGGTCAAATTGATGTATTCTACAGATGCAATAATCCAAGAGCATGCTGTTACGACACTTCTCAATCTATCAATCCACAGCGACCACAAAATCACCATTGCTCAGGCCAATATAATTGAACCTCTGATTCACGTCCTTGATACAGGAAGCCCTGAGGCAAGGGAGAACTCAGCTGCCACTTTCTTTAGCCTTGCTATGGTCGTGGAAAACAGGGTAAACATTGGGAGGTCTGGGGCCATTGGGCCTTTGGTTGAACTACTAGGTAATGGGACTCCTAGGGGAAGGAAAGATGCAACAACTGCATTGTTTTATCTGTCTATGCTTCCAGAGAACAAGGTCAAGATTGTGCAAGCTGGAGCTGTTAAGCATCTCGTGGAGTTGATGGATCCATCAGTTGGAATGGTTGACAAGACAGTTGCTGTTCTAGCAAATCTTGCTACAATTCAGGAGGGAAAGGTTGAAATTGGTAGGGTGGGTGGGATCCCTGTGTTGGTCGAGGCTATTGAATTGGGTTCTGCTAGAGGAAAAGAGAATGCAGCTGCTGCACTGTTACGGGTCTGCTCAGCCTCTAGTAAATTTTGCATAATGGCTCTCCAAGAAGGAGTTATCCCACCCTTAGTGGCACTGTCACAATCTGGAACTCGGAGGGCCAAGGATAAGGCTCAGGAACTGCTTAACCTCCTCAGAAAGCATGGGGCATGTAAATTTTCATGCCGCAATAGTATTACATCAGACACTGCTTGGATATTGGACCTGCCTCTGATCAAGCTATTACAGAAATTAGGCCCACCAAGTGTCAGTGGGCTAATATCTTGCACTAAGGAATTCTTGGGAGTATCTTATCCTGTACTGGAGGAGGCTAGATGTGATCACACTGGCATTAAAGCAAAAGTTCGAAAGCTGGTTGAGGACTTGACGAGTGATTCACTTGACACTTTAAGAACTACTACAGCTGAACTGCGGTTGCTCACCAAGATTAATGCGAATAATCGGAGGGTGATTGCAGACTATGGGGCAATTACCCTTTTGGTCAAATTGCTAAATTCTACGGACACTAAGATTCAAGAGAATGCTGTTACAGTACTTGTGAACTTATCAATAGACAATAATTGCAAAACTATGATTGTTCAGGCCAATGCAATTGAGCCTTTGATTCACGTTCTTCAAACTGGAAGCCCGGAGGCAAAGGAGAACTCAGCTGCTACTCTAGGTAGTCTTTCCGTGGTTGATGATAACCAGGTCAACATTGGGAGGTCCGGGGCAATAGGGCCTCTGGTTGACTTGTTGAGGGATGGTACTCCTCAGGGAAAGAAAGATGCAGCTACAGCACTGTTTAATTTGTCTTTGCTTTCCGAAAACAAGGAAAAGATTGTGGAGGCTGGCTCAATCAAGCATCTTGTGAAGTTGATGGACCCAGCTACTGGAATGGTCGAGAAGGCAGTGGTTGTTCTGGCAAATCTTGCATCAATAGATGAAGGAAGGATCGAAATTGTACGTGAGGGTGGTATTGCTTTGTTGGTTGACACTATTGAGTTAGGTTCTGCCAGGGCAAAAGAGTATGCAGCTGCAGCATTATTGTGGCTTTGTGCAATCACTAGTAGATTTTGCATCATGGCAATCCAAGAGGGAGCTATCCCACCATTAGTGGCACTGTCACAAACAGGCACAGCACGGGCCAAGGAAAAGGTACACGACTGCACTGAATTGTGTTTTCCTAAGATTCCAAATTCGCAATAG

Protein sequence

MEILAHEKLKENAEQVQITGEADIITHRHEHIITLQKSHSCGSVPIVDTNIIPNDIRKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSSVIKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKHGACKFSCRNSITSDTAWILDLPLIKLLQKLGPPSVSGLISCTKEFLGVSYPVLEEARCDHTGIKAKVRKLVEDLTSDSLDTLRTTTAELRLLTKINANNRRVIADYGAITLLVKLLNSTDTKIQENAVTVLVNLSIDNNCKTMIVQANAIEPLIHVLQTGSPEAKENSAATLGSLSVVDDNQVNIGRSGAIGPLVDLLRDGTPQGKKDAATALFNLSLLSENKEKIVEAGSIKHLVKLMDPATGMVEKAVVVLANLASIDEGRIEIVREGGIALLVDTIELGSARAKEYAAAALLWLCAITSRFCIMAIQEGAIPPLVALSQTGTARAKEKVHDCTELCFPKIPNSQ

Homology

[Close]

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot
Match: O22193 (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-96
Identity = 215/432 (49.77%), Postives = 284/432 (65.74%), Query Frame = 0


Query: 96  RNHLPTRSSSQLVNSADGVAKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNV 155
           R   P RSS  + ++  G  +NG           +SENH + +    S V +        
Sbjct: 411 RTDAPGRSS--VSSTTRGSVENGQ----------TSENHHHRSPSATSTVSN-------- 470

Query: 156 KPTFSQVISRDTSDTNSPVSPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEF-PLRLL 215
              F +  + + S+ ++  +P  S       S  +   + A+    L    P+F   R  
Sbjct: 471 -EEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDFSPKFMDRRTR 530

Query: 216 GE---RKSDIIGQQPHKLPEIVCSSVIKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLA 275
           G+   R S+ +G +    P       +  VE  ++KLVE+L S+SL+T R A AELR LA
Sbjct: 531 GQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLA 590

Query: 276 RHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPL 335
           +HN +NRI+I   GAI  LV+L+YSTD+  QE+AVT LLNLSI+ ++K  IA A  IEPL
Sbjct: 591 KHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPL 650

Query: 336 IHVLDTGSPEARENSAATFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTAL 395
           IHVL+ GS EA+ENSAAT FSL+++ EN++ IG+SGAIGPLV+LLGNGTPRG+KDA TAL
Sbjct: 651 IHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATAL 710

Query: 396 FYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIP 455
           F LS+  ENK  IVQ+GAV++L++LMDP+ GMVDK VAVLANLATI EG+  IG+ GGIP
Sbjct: 711 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIP 770

Query: 456 VLVEAIELGSARGKENAAAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQ 515
           +LVE +ELGSARGKENAAAALL++ + S +FC M LQEG +PPLVALSQSGT RA++KAQ
Sbjct: 771 LLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQ 821

Query: 516 ELLNLLR--KHG 522
            LL+  R  +HG
Sbjct: 831 ALLSYFRNQRHG 821

[Close]

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot
Match: Q5XEZ8 (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.2e-83
Identity = 194/394 (49.24%), Postives = 257/394 (65.23%), Query Frame = 0


Query: 128 VTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSPIGSAGRTRDTS 187
           + SSE  P +    ++   +   S+S       QV SR  S          + G   +  
Sbjct: 321 IHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSAS----------APGIVSEVV 380

Query: 188 QKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSSVIKSVEAGIQK 247
            K K  + A+   SL + +   P +   ER     G  P  + E   SS   S+E  ++K
Sbjct: 381 CKTKRNNNAAADRSLTRSNT--PWKFPEERHWRHPGIIPATVRETGSSS---SIETEVKK 440

Query: 248 LVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVT 307
           L++DL S+SL+T R A A +R LAR++T+NRI+IA   AI  LV L+YSTD  IQ  AVT
Sbjct: 441 LIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVT 500

Query: 308 TLLNLSIHSDHKITIAQANIIEPLIHVLDTG-SPEARENSAATFFSLAMVVENRVNIGRS 367
            LLNLSI+ ++K  IA++  I PLIHVL TG   EA+ NSAAT FSL+++ E +  IG +
Sbjct: 501 CLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA 560

Query: 368 GAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDK 427
           GAI PLV+LLG+G+  G+KDA TALF LS+  ENK K+++AGAV++LVELMDP+ GMV+K
Sbjct: 561 GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEK 620

Query: 428 TVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIMA 487
            V VLANLAT++EGK+ IG  GGIPVLVE +ELGSARGKENA AALL++C+ S KFC   
Sbjct: 621 AVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNV 680

Query: 488 LQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ++EGVIPPLVAL++SGT R K+KAQ LL   + H
Sbjct: 681 IREGVIPPLVALTKSGTARGKEKAQNLLKYFKAH 699

[Close]

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot
Match: Q8GWV5 (U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 8.1e-75
Identity = 159/273 (58.24%), Postives = 202/273 (73.99%), Query Frame = 0


Query: 247 KLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAV 306
           KLVEDL S S +    A AE+R L  ++ ENR+ I   GAIT L+ L+YS + + QEHAV
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAV 535

Query: 307 TTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVNIGRS 366
           T LLNLSI   +K  I +   IEPL+HVL+TG+  A+ENSAA+ FSL+++  NR  IG+S
Sbjct: 536 TALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQS 595

Query: 367 -GAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVD 426
             AI  LV LLG GT RG+KDA +ALF LS+  +NK +IVQA AVK+LVEL+DP + MVD
Sbjct: 596 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD 655

Query: 427 KTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIM 486
           K VA+LANL+ + EG+  I R GGIP+LVE ++LGS RGKENAA+ LL++C  S KFC +
Sbjct: 656 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTL 715

Query: 487 ALQEGVIPPLVALSQSGTRRAKDKAQELLNLLR 519
            LQEG IPPLVALSQSGT+RAK+KAQ+LL+  R
Sbjct: 716 VLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFR 748

[Close]

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot
Match: Q5VRH9 (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 7.3e-60
Identity = 137/278 (49.28%), Postives = 186/278 (66.91%), Query Frame = 0


Query: 243 AGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQ 302
           AG+  L+  L S + +  R A  E+R LA+ N  NRI IAE GAI  LV L+ S+D   Q
Sbjct: 323 AGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQ 382

Query: 303 EHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVN 362
           EHAVT LLNLSIH ++K +I  ++ I  ++ VL TGS E REN+AAT FSL++V EN+V 
Sbjct: 383 EHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVT 442

Query: 363 IGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVE-LMDPSV 422
           IG +GAI PL+ LL +G+PRG+KDA TA+F L +   NKV+ V+AG V HL+  L+DP+ 
Sbjct: 443 IGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTG 502

Query: 423 GMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSK 482
           GM+D+ +++L+ LA   EGK+ I R   IP LVE I+ GS R +ENAAA L  +CSA ++
Sbjct: 503 GMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTE 562

Query: 483 FCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRK 520
             + A   GV   L  LS++GT RAK KA  +L L+ +
Sbjct: 563 QTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQ 600

[Close]

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot
Match: Q9SNC6 (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-55
Identity = 141/326 (43.25%), Postives = 197/326 (60.43%), Query Frame = 0


Query: 200 LSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIV----CSSVIKSVEAG-IQKLVEDLSS 259
           L+   + P + LR L  +  +    +P K P  +     SS     EA  I+ L+  L+ 
Sbjct: 304 LTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAY 363

Query: 260 NSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVTTLLNLSI 319
            + E  R+A  E+R LA+ N +NR+ IAE GAI  LV L+ + D+ IQEH+VT LLNLSI
Sbjct: 364 GNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSI 423

Query: 320 HSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVNIGRSGAIGPLVE 379
             ++K  I  A  I  ++ VL  GS EAREN+AAT FSL+++ EN+V IG  GAI PLV 
Sbjct: 424 CENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVV 483

Query: 380 LLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELM-DPSVGMVDKTVAVLAN 439
           LL  GT RG+KDA TALF L +   NK K ++AG +  L  L+ +P  GMVD+ +A+LA 
Sbjct: 484 LLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAI 543

Query: 440 LATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIMALQEGVIP 499
           L++  EGK  IG    +P LVE I  GS R +ENAAA L+ +CS   +  + A + G++ 
Sbjct: 544 LSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMG 603

Query: 500 PLVALSQSGTRRAKDKAQELLNLLRK 520
           PL+ L+ +GT R K KA +LL  + +
Sbjct: 604 PLIDLAGNGTDRGKRKAAQLLERISR 629

[Close]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL
Match: A0A1S3B0X2 (U-box domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103484817 PE=4 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 5.2e-234
Identity = 443/530 (83.58%), Postives = 477/530 (90.00%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEA----DIITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLK+NAE+V+ TGEA    DIIT R EHI+ L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKKNAEEVETTGEAEHVDDIITQRCEHILRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSL+TISNNKK I+S KLENVK VVTPEKLNLGDRNHLPT S S+ VNS+DGV++
Sbjct: 61  RKAQMSSLATISNNKKFINSMKLENVKQVVTPEKLNLGDRNHLPTSSRSKFVNSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGDKLDFGGLPVTSSEN PN+TLD KSQVHDIVF DSNVKPTFS VISRD+ DT S +S 
Sbjct: 121 NGDKLDFGGLPVTSSENRPNVTLDEKSQVHDIVFFDSNVKPTFSLVISRDSEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+KVKLESPA  T + LQV+P+ P RLL ERKSD IGQQ  +LPEIVCSS
Sbjct: 181 IESAGRTRDASEKVKLESPAPATPAFLQVEPQLPRRLLVERKSDTIGQQGQELPEIVCSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + S EAGIQKLVEDL+SNSLET+R AIAE RSLAR NTENRI+IA+HGAI FL
Sbjct: 241 VADHESELGSDEAGIQKLVEDLNSNSLETIRAAIAEFRSLARQNTENRILIAKHGAIPFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAIIQEHAVTTLLNLSIHSDHKI IA+AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKIAIAEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAM+VENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMLVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHL+ELMDPSVGMVDKTVAVLANLATIQEGKVE+GR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLLELMDPSVGMVDKTVAVLANLATIQEGKVEVGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 530

[Close]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL
Match: A0A0A0KIF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493330 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 1.3e-232
Identity = 444/530 (83.77%), Postives = 472/530 (89.06%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEAD----IITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLKENAEQVQ TGEA+    IIT RHEHII L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKENAEQVQTTGEAEHVDRIITQRHEHIIRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSLSTIS+NK  I+S KLENVKLVVTPEKLN  DRNHLPT S S  V S+DGV++
Sbjct: 61  RKAQMSSLSTISSNKNFINSMKLENVKLVVTPEKLNSDDRNHLPTSSHSTFVKSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGD+LDFGGLPVTSSEN PN+TLD KSQVHDIV SD+N KPTFS V SRD  DT S +S 
Sbjct: 121 NGDELDFGGLPVTSSENRPNVTLDEKSQVHDIVLSDTNAKPTFSLVRSRDAEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+ VKLESPAS T + LQV+PE P RLL ERKSDII QQ HKLPEIV SS
Sbjct: 181 IESAGRTRDASEIVKLESPASATPAFLQVEPELPPRLLVERKSDIIEQQAHKLPEIVSSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + SVE+GIQKLVEDL+SNSLET+R AIAELRSLARHNTENRI+IA+HGAITFL
Sbjct: 241 VADHKSELGSVESGIQKLVEDLNSNSLETIRAAIAELRSLARHNTENRILIAKHGAITFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAI QEHAVTTLLNLSI SDHK+ I +AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAITQEHAVTTLLNLSIQSDHKVAITEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAMVVENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMVVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 530

[Close]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL
Match: A0A5D3CLM8 (U-box domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004390 PE=4 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 9.5e-228
Identity = 432/519 (83.24%), Postives = 466/519 (89.79%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEA----DIITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLK+NAE+V+ TGEA    DIIT R EHI+ L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKKNAEEVETTGEAEHVDDIITQRCEHILRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSL+TISNNKK I+S KLENVK VVTPEKLNLGDRNHLPT S S+ VNS+DGV++
Sbjct: 61  RKAQMSSLATISNNKKFINSMKLENVKQVVTPEKLNLGDRNHLPTSSRSKFVNSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGDKLDFGGLPVTSSEN PN+TLD KSQVHDIVF DSNVKPTFS VISRD+ DT S +S 
Sbjct: 121 NGDKLDFGGLPVTSSENRPNVTLDEKSQVHDIVFFDSNVKPTFSLVISRDSEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+KVKLESPA  T + LQV+P+ P RLL ERKSD IGQQ  +LPEIVCSS
Sbjct: 181 IESAGRTRDASEKVKLESPAPATPAFLQVEPQLPRRLLVERKSDTIGQQGQELPEIVCSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + S EAGIQKLVEDL+SNSLET+R AIAE RSLAR NTENRI+IA+HGAI FL
Sbjct: 241 VADHESELGSDEAGIQKLVEDLNSNSLETIRAAIAEFRSLARQNTENRILIAKHGAIPFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAIIQEHAVTTLLNLSIHSDHKI IA+AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKIAIAEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAM+VENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMLVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHL+ELMDPSVGMVDKTVAVLANLATIQEGKVE+GR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLLELMDPSVGMVDKTVAVLANLATIQEGKVEVGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDK 510
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDK
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDK 519

[Close]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL
Match: A0A6J1BVT4 (U-box domain-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC111005810 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 4.9e-192
Identity = 399/591 (67.51%), Postives = 445/591 (75.30%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEAD------IITHRHEHIITLQKSHSCGSVPIVDTNIIPN 60
           MEILA EKLK+NAEQV+ TGEA+       ITH HEH+I L+KS SC SVPI DT I P+
Sbjct: 1   MEILALEKLKKNAEQVRTTGEAEHIGEMLPITHTHEHVIVLKKSQSCSSVPISDTMITPS 60

Query: 61  DIRKAQISSLSTISNNKKLIDSTKLEN--------------------------------- 120
             RKAQISSL   SNN KLIDS K EN                                 
Sbjct: 61  YSRKAQISSL---SNNVKLIDS-KFENLNQSCHLRHRDSGKLKEFSSFARSREYQKTPPE 120

Query: 121 --VKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAKNGDKLDFGGLPVTSSENH----- 180
             + + VT E  NLGD NHLP R  SQLVNS   VA++ +KLDFGG  ++SSE++     
Sbjct: 121 STLSVGVTQENFNLGDGNHLPARPYSQLVNSPHVVAQSVEKLDFGGFSISSSEDYHNLNE 180

Query: 181 ------------------PNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 240
                             PN+T D KS VHD  FS SN  PTF+QV+SRD++DT SPVS 
Sbjct: 181 DNMDISSDHLVSLYRTDRPNVT-DEKSHVHDFAFSASNANPTFAQVVSRDSNDTTSPVSS 240

Query: 241 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGER-KSDIIGQQPHKLPEIVCS 300
           +G AG T DTS++VK E PAS+T S+ QV+PEFPLRL  ER +SDIIGQQPHKLPEIVCS
Sbjct: 241 VGPAGLTMDTSEEVKSEPPASMTPSISQVEPEFPLRLSVERTQSDIIGQQPHKLPEIVCS 300

Query: 301 SVIK------SVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITF 360
           SVI+        EAG+QKLVEDL+SNSLETVR AIAELRS+A+ N ENRIMIAE GA++F
Sbjct: 301 SVIEPRSDLGGTEAGVQKLVEDLNSNSLETVRAAIAELRSIAKLNNENRIMIAELGAMSF 360

Query: 361 LVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAAT 420
           LVK +YSTDAIIQEHAVTTLLNLSI SD KI IAQAN IEPLI VLDTGSPEA+ENSAAT
Sbjct: 361 LVKFLYSTDAIIQEHAVTTLLNLSICSDLKIAIAQANAIEPLIRVLDTGSPEAKENSAAT 420

Query: 421 FFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGA 480
            FSL+MV EN+V IGRSGAIGPLVELLGNGTPRG+KDATTALFYLSM+PENKVKIVQAGA
Sbjct: 421 LFSLSMVEENKVKIGRSGAIGPLVELLGNGTPRGKKDATTALFYLSMIPENKVKIVQAGA 480

Query: 481 VKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAA 521
           VKHLV+LMDPSVGMVDK VAVLANLATIQEGK+EIG  GGIPVLVEAIELGSARGKENAA
Sbjct: 481 VKHLVDLMDPSVGMVDKAVAVLANLATIQEGKIEIGGDGGIPVLVEAIELGSARGKENAA 540

[Close]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL
Match: A0A6J1KMT3 (U-box domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497103 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 6.2e-179
Identity = 358/532 (67.29%), Postives = 406/532 (76.32%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEADII------THRHEHIITLQKSHSCGSVPIVDTNIIPN 60
           MEI+  EKLKEN E++Q TGE++ +      THRHEHIIT++ S SC  VPIV+T+II N
Sbjct: 1   MEIMTLEKLKENDERIQSTGESEHVDEMHLRTHRHEHIITVENSRSCSPVPIVNTHIISN 60

Query: 61  DIRKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGV 120
             RKAQISSL                                                  
Sbjct: 61  FSRKAQISSL-------------------------------------------------- 120

Query: 121 AKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPV 180
                   +GGLP+TSSE+ PN   + KSQVHD VFSDSN  PTF+QVIS +T+DT SPV
Sbjct: 121 --------YGGLPITSSEDRPNCMSNEKSQVHDGVFSDSNANPTFAQVISIETTDTASPV 180

Query: 181 SPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVC 240
             IG    TRDTS+KV+ E   SVT S  QV+P+FPLRL  ERK  I+GQQP KLPE+VC
Sbjct: 181 LSIGRLSSTRDTSEKVRSEPSVSVTPSFSQVEPQFPLRLSVERKGGIVGQQPQKLPEVVC 240

Query: 241 SSVIK------SVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAIT 300
           SS I+      S EA +QKLVE+L+SNSLET+R AIAELRSLA+ NT+NRIMI EHGAI+
Sbjct: 241 SSEIEPRSDLVSAEARVQKLVENLNSNSLETIRAAIAELRSLAKLNTDNRIMITEHGAIS 300

Query: 301 FLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAA 360
           FLVKL+YSTDAIIQEHAVTTLLNLSI+ D++I IA+AN+IEPLIHVL TG+PEA+EN+AA
Sbjct: 301 FLVKLLYSTDAIIQEHAVTTLLNLSIYEDNRIAIAEANVIEPLIHVLGTGTPEAKENAAA 360

Query: 361 TFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG 420
           TFFSLAMV ENRV IGRS AIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG
Sbjct: 361 TFFSLAMVEENRVKIGRSEAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG 420

Query: 421 AVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENA 480
           AV+HLVELMDPS+GMVDKTVAVLANL+TIQEGKVEIGR GGIPVLVEAIELGSARGKENA
Sbjct: 421 AVQHLVELMDPSIGMVDKTVAVLANLSTIQEGKVEIGRGGGIPVLVEAIELGSARGKENA 474

Query: 481 AAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           AAALLR+CS+S+KFCIMA+QEGVIPPLVALSQSGT RAKDKAQ LL+L RKH
Sbjct: 481 AAALLRICSSSNKFCIMAIQEGVIPPLVALSQSGTTRAKDKAQALLSLFRKH 474

[Close]

BLAST of Lsi01G009330 vs. NCBI nr
Match: KAG7026959.1 (U-box domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1052.0 bits (2719), Expect = 2.9e-303
Identity = 596/863 (69.06%), Postives = 664/863 (76.94%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEADII------THRHEHIITLQKSHSCGSVPIVDTNIIPN 60
           MEI+  EKLKEN E++Q TGE++ +      THRHEHIIT++KS SC  VP+V+TNII N
Sbjct: 30  MEIMTLEKLKENDERIQSTGESEHVDEMHLRTHRHEHIITVEKSRSCSPVPMVNTNIISN 89

Query: 61  DIRKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGV 120
             RK QISSL                                                  
Sbjct: 90  FSRKVQISSL-------------------------------------------------- 149

Query: 121 AKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPV 180
                   +GGLPVTSSE+ PN   + KSQVHD VFSDSN  PTF+Q+ISR+T+DT SPV
Sbjct: 150 --------YGGLPVTSSEDPPNCMSNEKSQVHDGVFSDSNANPTFAQIISRETTDTASPV 209

Query: 181 SPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVC 240
             IG A  TRDTS++V+ E   SVT SL QV+P+FPLRL  ERKS IIGQQP +LPE+VC
Sbjct: 210 LSIGRASFTRDTSEEVRSEPSVSVTPSLSQVEPQFPLRLSVERKSGIIGQQPQQLPEVVC 269

Query: 241 SSVIK------SVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAIT 300
           SS I+      S EA +QKLVE+L+SNSLET+R AIAELRSLA+ NT+NRIMI EHGAI+
Sbjct: 270 SSEIEPRSDLGSAEARVQKLVENLNSNSLETIRAAIAELRSLAKLNTDNRIMITEHGAIS 329

Query: 301 FLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAA 360
           FLVKL+YSTDAI+QEHAVTTLLNLSI+ D++I IAQA++IEPLIHVL TG+PEA+EN+AA
Sbjct: 330 FLVKLLYSTDAIVQEHAVTTLLNLSIYEDNRIAIAQADVIEPLIHVLGTGTPEAKENAAA 389

Query: 361 TFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG 420
           TFFSLAMV ENRV IGRS AIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG
Sbjct: 390 TFFSLAMVEENRVKIGRSEAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAG 449

Query: 421 AVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENA 480
           AV+HLVELMDPS+GM DKTVAVLANL+TIQEGKVEIGR GGIPVLVEAIELGSARGKENA
Sbjct: 450 AVQHLVELMDPSIGMGDKTVAVLANLSTIQEGKVEIGRGGGIPVLVEAIELGSARGKENA 509

Query: 481 AAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKHGACKFSCR 540
           AAALLR+CS+S+KFCIMA+QEG+IPPLVALSQSGT RAKDKAQ LL+L RKH        
Sbjct: 510 AAALLRICSSSNKFCIMAIQEGIIPPLVALSQSGTTRAKDKAQALLSLFRKH-------- 569

Query: 541 NSITSDTAWILDLPLIKLLQKLGPPSVSGLISCTKEFLGVSYPVLEEARCDHTGIKAKVR 600
                                                      V      DHT  KA V 
Sbjct: 570 -------------------------------------------VHSNVNADHTCTKAIVE 629

Query: 601 KLVEDLTSDSLDTLRTTTAELRLLTKINANNRRVIADYGAITLLVKLLNSTDTKIQENAV 660
           KLVEDL+S +L+TLRTTTAELRLLTK+NA NRRVI+D GAI+LLV LLNSTD ++QENAV
Sbjct: 630 KLVEDLSSHTLETLRTTTAELRLLTKLNAKNRRVISDCGAISLLVNLLNSTDAQVQENAV 689

Query: 661 TVLVNLSIDNNCKTMIVQANAIEPLIHVLQTGSPEAKENSAATLGSLSVVDDNQVNIGRS 720
           T LVNLSIDNNCK +I QANAIE LIHVLQTGSPEAKENSAATLGSLSV +DNQV IGRS
Sbjct: 690 TALVNLSIDNNCKIIIAQANAIEALIHVLQTGSPEAKENSAATLGSLSVCEDNQVKIGRS 749

Query: 721 GAIGPLVDLLRDGTPQGKKDAATALFNLSLLSENKEKIVEAGSIKHLVKLMDPATGMVEK 780
           GAIGPLVDLLRDGTP+GKKDAATALFNLSLLSENK KIVEAGSIKHLVKLMDPA GMVEK
Sbjct: 750 GAIGPLVDLLRDGTPRGKKDAATALFNLSLLSENKAKIVEAGSIKHLVKLMDPAAGMVEK 783

Query: 781 AVVVLANLASIDEGRIEIVREGGIALLVDTIELGSARAKEYAAAALLWLCAITSRFCIMA 840
           AVVVLAN+ASIDEGRIEIVREGGI LLVD +ELGSARAKEYAAAALLWLCAI+SRFCIMA
Sbjct: 810 AVVVLANVASIDEGRIEIVREGGIPLLVDAVELGSARAKEYAAAALLWLCAISSRFCIMA 783

Query: 841 IQEGAIPPLVALSQTGTARAKEK 852
           I+EGA+PPLVALSQ+GTARAKEK
Sbjct: 870 IREGAVPPLVALSQSGTARAKEK 783

[Close]

BLAST of Lsi01G009330 vs. NCBI nr
Match: XP_008440336.1 (PREDICTED: U-box domain-containing protein 4-like [Cucumis melo])

HSP 1 Score: 820.8 bits (2119), Expect = 1.1e-233
Identity = 443/530 (83.58%), Postives = 477/530 (90.00%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEA----DIITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLK+NAE+V+ TGEA    DIIT R EHI+ L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKKNAEEVETTGEAEHVDDIITQRCEHILRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSL+TISNNKK I+S KLENVK VVTPEKLNLGDRNHLPT S S+ VNS+DGV++
Sbjct: 61  RKAQMSSLATISNNKKFINSMKLENVKQVVTPEKLNLGDRNHLPTSSRSKFVNSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGDKLDFGGLPVTSSEN PN+TLD KSQVHDIVF DSNVKPTFS VISRD+ DT S +S 
Sbjct: 121 NGDKLDFGGLPVTSSENRPNVTLDEKSQVHDIVFFDSNVKPTFSLVISRDSEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+KVKLESPA  T + LQV+P+ P RLL ERKSD IGQQ  +LPEIVCSS
Sbjct: 181 IESAGRTRDASEKVKLESPAPATPAFLQVEPQLPRRLLVERKSDTIGQQGQELPEIVCSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + S EAGIQKLVEDL+SNSLET+R AIAE RSLAR NTENRI+IA+HGAI FL
Sbjct: 241 VADHESELGSDEAGIQKLVEDLNSNSLETIRAAIAEFRSLARQNTENRILIAKHGAIPFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAIIQEHAVTTLLNLSIHSDHKI IA+AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKIAIAEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAM+VENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMLVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHL+ELMDPSVGMVDKTVAVLANLATIQEGKVE+GR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLLELMDPSVGMVDKTVAVLANLATIQEGKVEVGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 530

[Close]

BLAST of Lsi01G009330 vs. NCBI nr
Match: XP_004141993.1 (U-box domain-containing protein 4 [Cucumis sativus] >XP_031743633.1 U-box domain-containing protein 4 [Cucumis sativus])

HSP 1 Score: 816.2 bits (2107), Expect = 2.6e-232
Identity = 444/530 (83.77%), Postives = 472/530 (89.06%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEAD----IITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLKENAEQVQ TGEA+    IIT RHEHII L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKENAEQVQTTGEAEHVDRIITQRHEHIIRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSLSTIS+NK  I+S KLENVKLVVTPEKLN  DRNHLPT S S  V S+DGV++
Sbjct: 61  RKAQMSSLSTISSNKNFINSMKLENVKLVVTPEKLNSDDRNHLPTSSHSTFVKSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGD+LDFGGLPVTSSEN PN+TLD KSQVHDIV SD+N KPTFS V SRD  DT S +S 
Sbjct: 121 NGDELDFGGLPVTSSENRPNVTLDEKSQVHDIVLSDTNAKPTFSLVRSRDAEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+ VKLESPAS T + LQV+PE P RLL ERKSDII QQ HKLPEIV SS
Sbjct: 181 IESAGRTRDASEIVKLESPASATPAFLQVEPELPPRLLVERKSDIIEQQAHKLPEIVSSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + SVE+GIQKLVEDL+SNSLET+R AIAELRSLARHNTENRI+IA+HGAITFL
Sbjct: 241 VADHKSELGSVESGIQKLVEDLNSNSLETIRAAIAELRSLARHNTENRILIAKHGAITFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAI QEHAVTTLLNLSI SDHK+ I +AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAITQEHAVTTLLNLSIQSDHKVAITEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAMVVENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMVVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 530

[Close]

BLAST of Lsi01G009330 vs. NCBI nr
Match: TYK12847.1 (U-box domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 800.0 bits (2065), Expect = 2.0e-227
Identity = 432/519 (83.24%), Postives = 466/519 (89.79%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEA----DIITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLK+NAE+V+ TGEA    DIIT R EHI+ L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKKNAEEVETTGEAEHVDDIITQRCEHILRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSL+TISNNKK I+S KLENVK VVTPEKLNLGDRNHLPT S S+ VNS+DGV++
Sbjct: 61  RKAQMSSLATISNNKKFINSMKLENVKQVVTPEKLNLGDRNHLPTSSRSKFVNSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGDKLDFGGLPVTSSEN PN+TLD KSQVHDIVF DSNVKPTFS VISRD+ DT S +S 
Sbjct: 121 NGDKLDFGGLPVTSSENRPNVTLDEKSQVHDIVFFDSNVKPTFSLVISRDSEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+KVKLESPA  T + LQV+P+ P RLL ERKSD IGQQ  +LPEIVCSS
Sbjct: 181 IESAGRTRDASEKVKLESPAPATPAFLQVEPQLPRRLLVERKSDTIGQQGQELPEIVCSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + S EAGIQKLVEDL+SNSLET+R AIAE RSLAR NTENRI+IA+HGAI FL
Sbjct: 241 VADHESELGSDEAGIQKLVEDLNSNSLETIRAAIAEFRSLARQNTENRILIAKHGAIPFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAIIQEHAVTTLLNLSIHSDHKI IA+AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKIAIAEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAM+VENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMLVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHL+ELMDPSVGMVDKTVAVLANLATIQEGKVE+GR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLLELMDPSVGMVDKTVAVLANLATIQEGKVEVGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDK 510
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDK
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDK 519

[Close]

BLAST of Lsi01G009330 vs. NCBI nr
Match: KAE8647512.1 (hypothetical protein Csa_002816 [Cucumis sativus])

HSP 1 Score: 796.6 bits (2056), Expect = 2.2e-226
Identity = 434/525 (82.67%), Postives = 463/525 (88.19%), Query Frame = 0


Query: 1   MEILAHEKLKENAEQVQITGEAD----IITHRHEHIITLQKSHSCGSVPIVDTNIIPNDI 60
           MEILAH KLKENAEQVQ TGEA+    IIT RHEHII L+KS SCGSVPIVDTNIIPN I
Sbjct: 1   MEILAHNKLKENAEQVQTTGEAEHVDRIITQRHEHIIRLEKSRSCGSVPIVDTNIIPNYI 60

Query: 61  RKAQISSLSTISNNKKLIDSTKLENVKLVVTPEKLNLGDRNHLPTRSSSQLVNSADGVAK 120
           RKAQ+SSLSTIS+NK  I+S KLENVKLVVTPEKLN  DRNHLPT S S  V S+DGV++
Sbjct: 61  RKAQMSSLSTISSNKNFINSMKLENVKLVVTPEKLNSDDRNHLPTSSHSTFVKSSDGVSQ 120

Query: 121 NGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSP 180
           NGD+LDFGGLPVTSSEN PN+TLD KSQVHDIV SD+N KPTFS V SRD  DT S +S 
Sbjct: 121 NGDELDFGGLPVTSSENRPNVTLDEKSQVHDIVLSDTNAKPTFSLVRSRDAEDTTSTLSS 180

Query: 181 IGSAGRTRDTSQKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSS 240
           I SAGRTRD S+ VKLESPAS T + LQV+PE P RLL ERKSDII QQ HKLPEIV SS
Sbjct: 181 IESAGRTRDASEIVKLESPASATPAFLQVEPELPPRLLVERKSDIIEQQAHKLPEIVSSS 240

Query: 241 V------IKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFL 300
           V      + SVE+GIQKLVEDL+SNSLET+R AIAELRSLARHNTENRI+IA+HGAITFL
Sbjct: 241 VADHKSELGSVESGIQKLVEDLNSNSLETIRAAIAELRSLARHNTENRILIAKHGAITFL 300

Query: 301 VKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATF 360
           VKLMYSTDAI QEHAVTTLLNLSI SDHK+ I +AN+IEPLIHVL TGSPEARENSAATF
Sbjct: 301 VKLMYSTDAITQEHAVTTLLNLSIQSDHKVAITEANVIEPLIHVLVTGSPEARENSAATF 360

Query: 361 FSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420
           FSLAMVVENRV IG+SGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV
Sbjct: 361 FSLAMVVENRVKIGKSGAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAV 420

Query: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAA 480
           KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGR+GGIPVLVEAIELGSARGKENAAA
Sbjct: 421 KHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRMGGIPVLVEAIELGSARGKENAAA 480

Query: 481 ALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQELLN 516
           ALLRVCS S++FCIMALQEGVIPPLVALSQSGTRRAKDK    +N
Sbjct: 481 ALLRVCSTSNRFCIMALQEGVIPPLVALSQSGTRRAKDKVFTAIN 525

[Close]

BLAST of Lsi01G009330 vs. TAIR 10
Match: AT2G23140.1 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 354.4 bits (908), Expect = 2.6e-97
Identity = 215/432 (49.77%), Postives = 284/432 (65.74%), Query Frame = 0


Query: 96  RNHLPTRSSSQLVNSADGVAKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNV 155
           R   P RSS  + ++  G  +NG           +SENH + +    S V +        
Sbjct: 414 RTDAPGRSS--VSSTTRGSVENGQ----------TSENHHHRSPSATSTVSN-------- 473

Query: 156 KPTFSQVISRDTSDTNSPVSPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEF-PLRLL 215
              F +  + + S+ ++  +P  S       S  +   + A+    L    P+F   R  
Sbjct: 474 -EEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDFSPKFMDRRTR 533

Query: 216 GE---RKSDIIGQQPHKLPEIVCSSVIKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLA 275
           G+   R S+ +G +    P       +  VE  ++KLVE+L S+SL+T R A AELR LA
Sbjct: 534 GQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLA 593

Query: 276 RHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPL 335
           +HN +NRI+I   GAI  LV+L+YSTD+  QE+AVT LLNLSI+ ++K  IA A  IEPL
Sbjct: 594 KHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPL 653

Query: 336 IHVLDTGSPEARENSAATFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTAL 395
           IHVL+ GS EA+ENSAAT FSL+++ EN++ IG+SGAIGPLV+LLGNGTPRG+KDA TAL
Sbjct: 654 IHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATAL 713

Query: 396 FYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIP 455
           F LS+  ENK  IVQ+GAV++L++LMDP+ GMVDK VAVLANLATI EG+  IG+ GGIP
Sbjct: 714 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIP 773

Query: 456 VLVEAIELGSARGKENAAAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQ 515
           +LVE +ELGSARGKENAAAALL++ + S +FC M LQEG +PPLVALSQSGT RA++KAQ
Sbjct: 774 LLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQ 824

Query: 516 ELLNLLR--KHG 522
            LL+  R  +HG
Sbjct: 834 ALLSYFRNQRHG 824

[Close]

BLAST of Lsi01G009330 vs. TAIR 10
Match: AT2G23140.2 (RING/U-box superfamily protein with ARM repeat domain )

HSP 1 Score: 354.4 bits (908), Expect = 2.6e-97
Identity = 215/432 (49.77%), Postives = 284/432 (65.74%), Query Frame = 0


Query: 96  RNHLPTRSSSQLVNSADGVAKNGDKLDFGGLPVTSSENHPNMTLDGKSQVHDIVFSDSNV 155
           R   P RSS  + ++  G  +NG           +SENH + +    S V +        
Sbjct: 411 RTDAPGRSS--VSSTTRGSVENGQ----------TSENHHHRSPSATSTVSN-------- 470

Query: 156 KPTFSQVISRDTSDTNSPVSPIGSAGRTRDTSQKVKLESPASVTLSLLQVDPEF-PLRLL 215
              F +  + + S+ ++  +P  S       S  +   + A+    L    P+F   R  
Sbjct: 471 -EEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDFSPKFMDRRTR 530

Query: 216 GE---RKSDIIGQQPHKLPEIVCSSVIKSVEAGIQKLVEDLSSNSLETVRTAIAELRSLA 275
           G+   R S+ +G +    P       +  VE  ++KLVE+L S+SL+T R A AELR LA
Sbjct: 531 GQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLA 590

Query: 276 RHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVTTLLNLSIHSDHKITIAQANIIEPL 335
           +HN +NRI+I   GAI  LV+L+YSTD+  QE+AVT LLNLSI+ ++K  IA A  IEPL
Sbjct: 591 KHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPL 650

Query: 336 IHVLDTGSPEARENSAATFFSLAMVVENRVNIGRSGAIGPLVELLGNGTPRGRKDATTAL 395
           IHVL+ GS EA+ENSAAT FSL+++ EN++ IG+SGAIGPLV+LLGNGTPRG+KDA TAL
Sbjct: 651 IHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATAL 710

Query: 396 FYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDKTVAVLANLATIQEGKVEIGRVGGIP 455
           F LS+  ENK  IVQ+GAV++L++LMDP+ GMVDK VAVLANLATI EG+  IG+ GGIP
Sbjct: 711 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIP 770

Query: 456 VLVEAIELGSARGKENAAAALLRVCSASSKFCIMALQEGVIPPLVALSQSGTRRAKDKAQ 515
           +LVE +ELGSARGKENAAAALL++ + S +FC M LQEG +PPLVALSQSGT RA++KAQ
Sbjct: 771 LLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQ 821

Query: 516 ELLNLLR--KHG 522
            LL+  R  +HG
Sbjct: 831 ALLSYFRNQRHG 821

[Close]

BLAST of Lsi01G009330 vs. TAIR 10
Match: AT5G67340.1 (ARM repeat superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-84
Identity = 194/394 (49.24%), Postives = 257/394 (65.23%), Query Frame = 0


Query: 128 VTSSENHPNMTLDGKSQVHDIVFSDSNVKPTFSQVISRDTSDTNSPVSPIGSAGRTRDTS 187
           + SSE  P +    ++   +   S+S       QV SR  S          + G   +  
Sbjct: 321 IHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSAS----------APGIVSEVV 380

Query: 188 QKVKLESPASVTLSLLQVDPEFPLRLLGERKSDIIGQQPHKLPEIVCSSVIKSVEAGIQK 247
            K K  + A+   SL + +   P +   ER     G  P  + E   SS   S+E  ++K
Sbjct: 381 CKTKRNNNAAADRSLTRSNT--PWKFPEERHWRHPGIIPATVRETGSSS---SIETEVKK 440

Query: 248 LVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAVT 307
           L++DL S+SL+T R A A +R LAR++T+NRI+IA   AI  LV L+YSTD  IQ  AVT
Sbjct: 441 LIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVT 500

Query: 308 TLLNLSIHSDHKITIAQANIIEPLIHVLDTG-SPEARENSAATFFSLAMVVENRVNIGRS 367
            LLNLSI+ ++K  IA++  I PLIHVL TG   EA+ NSAAT FSL+++ E +  IG +
Sbjct: 501 CLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA 560

Query: 368 GAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVDK 427
           GAI PLV+LLG+G+  G+KDA TALF LS+  ENK K+++AGAV++LVELMDP+ GMV+K
Sbjct: 561 GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEK 620

Query: 428 TVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIMA 487
            V VLANLAT++EGK+ IG  GGIPVLVE +ELGSARGKENA AALL++C+ S KFC   
Sbjct: 621 AVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNV 680

Query: 488 LQEGVIPPLVALSQSGTRRAKDKAQELLNLLRKH 521
           ++EGVIPPLVAL++SGT R K+KAQ LL   + H
Sbjct: 681 IREGVIPPLVALTKSGTARGKEKAQNLLKYFKAH 699

[Close]

BLAST of Lsi01G009330 vs. TAIR 10
Match: AT3G54790.1 (ARM repeat superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 5.7e-76
Identity = 159/273 (58.24%), Postives = 202/273 (73.99%), Query Frame = 0


Query: 247 KLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAV 306
           KLVEDL S S +    A AE+R L  ++ ENR+ I   GAIT L+ L+YS + + QEHAV
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAV 535

Query: 307 TTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVNIGRS 366
           T LLNLSI   +K  I +   IEPL+HVL+TG+  A+ENSAA+ FSL+++  NR  IG+S
Sbjct: 536 TALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQS 595

Query: 367 -GAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVD 426
             AI  LV LLG GT RG+KDA +ALF LS+  +NK +IVQA AVK+LVEL+DP + MVD
Sbjct: 596 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD 655

Query: 427 KTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIM 486
           K VA+LANL+ + EG+  I R GGIP+LVE ++LGS RGKENAA+ LL++C  S KFC +
Sbjct: 656 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTL 715

Query: 487 ALQEGVIPPLVALSQSGTRRAKDKAQELLNLLR 519
            LQEG IPPLVALSQSGT+RAK+KAQ+LL+  R
Sbjct: 716 VLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFR 748

[Close]

BLAST of Lsi01G009330 vs. TAIR 10
Match: AT3G54790.2 (ARM repeat superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 5.7e-76
Identity = 159/273 (58.24%), Postives = 202/273 (73.99%), Query Frame = 0


Query: 247 KLVEDLSSNSLETVRTAIAELRSLARHNTENRIMIAEHGAITFLVKLMYSTDAIIQEHAV 306
           KLVEDL S S +    A AE+R L  ++ ENR+ I   GAIT L+ L+YS + + QEHAV
Sbjct: 440 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAV 499

Query: 307 TTLLNLSIHSDHKITIAQANIIEPLIHVLDTGSPEARENSAATFFSLAMVVENRVNIGRS 366
           T LLNLSI   +K  I +   IEPL+HVL+TG+  A+ENSAA+ FSL+++  NR  IG+S
Sbjct: 500 TALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQS 559

Query: 367 -GAIGPLVELLGNGTPRGRKDATTALFYLSMLPENKVKIVQAGAVKHLVELMDPSVGMVD 426
             AI  LV LLG GT RG+KDA +ALF LS+  +NK +IVQA AVK+LVEL+DP + MVD
Sbjct: 560 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD 619

Query: 427 KTVAVLANLATIQEGKVEIGRVGGIPVLVEAIELGSARGKENAAAALLRVCSASSKFCIM 486
           K VA+LANL+ + EG+  I R GGIP+LVE ++LGS RGKENAA+ LL++C  S KFC +
Sbjct: 620 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTL 679

Query: 487 ALQEGVIPPLVALSQSGTRRAKDKAQELLNLLR 519
            LQEG IPPLVALSQSGT+RAK+KAQ+LL+  R
Sbjct: 680 VLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFR 712

The following BLAST results are available for this feature:

BLAST of Lsi01G009330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22193	3.7e-96	49.77	U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 S...	[more]
Q5XEZ8	6.2e-83	49.24	U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 S...	[more]
Q8GWV5	8.1e-75	58.24	U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 S...	[more]
Q5VRH9	7.3e-60	49.28	U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
Q9SNC6	3.2e-55	43.25	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]

BLAST of Lsi01G009330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0X2	5.2e-234	83.58	U-box domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103484817 P...	[more]
A0A0A0KIF8	1.3e-232	83.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493330 PE=4 SV=1	[more]
A0A5D3CLM8	9.5e-228	83.24	U-box domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1BVT4	4.9e-192	67.51	U-box domain-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1KMT3	6.2e-179	67.29	U-box domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC1114971...	[more]

BLAST of Lsi01G009330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026959.1	2.9e-303	69.06	U-box domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008440336.1	1.1e-233	83.58	PREDICTED: U-box domain-containing protein 4-like [Cucumis melo]	[more]
XP_004141993.1	2.6e-232	83.77	U-box domain-containing protein 4 [Cucumis sativus] >XP_031743633.1 U-box domain...	[more]
TYK12847.1	2.0e-227	83.24	U-box domain-containing protein 4-like [Cucumis melo var. makuwa]	[more]
KAE8647512.1	2.2e-226	82.67	hypothetical protein Csa_002816 [Cucumis sativus]	[more]

BLAST of Lsi01G009330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23140.1	2.6e-97	49.77	RING/U-box superfamily protein with ARM repeat domain	[more]
AT2G23140.2	2.6e-97	49.77	RING/U-box superfamily protein with ARM repeat domain	[more]
AT5G67340.1	4.4e-84	49.24	ARM repeat superfamily protein	[more]
AT3G54790.1	5.7e-76	58.24	ARM repeat superfamily protein	[more]
AT3G54790.2	5.7e-76	58.24	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 356..396 e-value: 47.0 score: 8.1 coord: 274..314 e-value: 3.2E-5 score: 33.4 coord: 315..355 e-value: 1.9 score: 17.5 coord: 698..738 e-value: 5.6 score: 15.2 coord: 739..778 e-value: 0.0019 score: 27.5 coord: 616..656 e-value: 3.8E-4 score: 29.8 coord: 234..272 e-value: 220.0 score: 2.9 coord: 437..477 e-value: 38.0 score: 8.8 coord: 397..436 e-value: 0.0051 score: 26.0 coord: 779..819 e-value: 10.0 score: 13.1 coord: 657..697 e-value: 0.0021 score: 27.3
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 358..395 e-value: 2.4E-4 score: 21.0 coord: 316..354 e-value: 3.6E-4 score: 20.5 coord: 700..737 e-value: 4.5E-5 score: 23.3 coord: 274..313 e-value: 6.0E-7 score: 29.3 coord: 657..696 e-value: 1.0E-6 score: 28.5 coord: 740..778 e-value: 1.7E-4 score: 21.5 coord: 617..655 e-value: 5.6E-9 score: 35.7
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 709..751 score: 10.9374
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 408..449 score: 8.7674
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 285..327 score: 9.7474
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 627..669 score: 13.5624
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 750..791 score: 11.2874
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 243..285 score: 9.9224
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 574..860 e-value: 1.9E-53 score: 183.7 coord: 228..558 e-value: 2.1E-54 score: 186.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..189
None	No IPR available	PANTHER	PTHR23315:SF280	RING-TYPE E3 UBIQUITIN TRANSFERASE	coord: 239..520
None	No IPR available	PANTHER	PTHR23315:SF280	RING-TYPE E3 UBIQUITIN TRANSFERASE	coord: 565..853
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 239..520
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 565..853
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 587..850
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 244..523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G009330.1	Lsi01G009330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding