Homology
BLAST of Lsi01G008910 vs. ExPASy Swiss-Prot
Match:
Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)
HSP 1 Score: 837.8 bits (2163), Expect = 1.1e-241
Identity = 432/716 (60.34%), Postives = 544/716 (75.98%), Query Frame = 0
Query: 13 PKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQADQSPPLSESQK 72
P+ EPD EKIKRRLL+ GV PTPKI+ +LRKKEIQKHNR+ +R E +A+ +E+QK
Sbjct: 17 PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAE---VYTEAQK 76
Query: 73 QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNLKELTG--FRTEYN 132
Q + EE F TLR EYK+F+++I K G GLMVG PWE +ERV LKEL R E +
Sbjct: 77 QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136
Query: 133 RDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRRRGDGEIIR 192
LKKE+L+EL+K+ E +DL+WVLDDDV+++E L+ E D KR R +GE +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196
Query: 193 FLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYSL 252
LVDRLS R I+ + WKF RMM +SGLQF E Q+LKI+D LG K WKQA +VV WVYS
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256
Query: 253 KSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
K H +SRFVYTKLL+VLG AR+PQEALQIFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316
Query: 313 LKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
LK+LLKVIE MRQ+P+K +N K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376
Query: 373 LRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYRGSFIFLVK 432
LRK+GLRPNGATYGL+ME VML+SGK++++H F KMK SGE KA TY+ LV+
Sbjct: 377 LRKNGLRPNGATYGLAME---VMLESGKFDRVHDFFRKMKSSGEAPKAITYK----VLVR 436
Query: 433 AFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMK 492
A W EG + A+EAVRDMEQ+GV+G+ SVYYELACCLC NGRW DA++EV +MK L + +
Sbjct: 437 ALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCR 496
Query: 493 PLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDMFSKAKDLF 552
PL +TFTG+I +S +GGH+DDC++IF+YMK C PNIGT N MLKVYGRNDMFS+AK+LF
Sbjct: 497 PLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELF 556
Query: 553 EEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSK 612
EEI + + LVP+EYTY MLEA+A +LQWEYFE+VY+ M LSG+++DQ+K
Sbjct: 557 EEIVSRKE--------THLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTK 616
Query: 613 YAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMG 672
+A +L+EASRAGKW LL+HAFD +LE G+IPHPL FTE++ T + ++++A+TL+ T+
Sbjct: 617 HASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVA 676
Query: 673 YAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCD-ASEATVSNLSRSLQSLC 724
A FQ+SE +WT+LFE + D L +NL KLSD L CD SE TVSNLS+SL+S C
Sbjct: 677 LASFQISEEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707
BLAST of Lsi01G008910 vs. ExPASy Swiss-Prot
Match:
Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 3.4e-89
Identity = 220/699 (31.47%), Postives = 361/699 (51.65%), Query Frame = 0
Query: 5 STNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQ--KHNRKLERLAE---- 64
S + + PK E + ++ + + I R + E++ R+++R+A+
Sbjct: 257 SGESSVTMPKDESFRRRYSKQEHHRSSDTSRGIARGSKGDELELVVEERRVQRIAKDVRW 316
Query: 65 RQADQS-PPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAG-GLMVGRPWERLERVN 124
++D+S P+SE + + + S+ IE G GL + R+ER+
Sbjct: 317 SKSDESLVPVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGDGLDLLAEERRIERL- 376
Query: 125 LKELTGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDV-ELKEEWLESENGHCD 184
R ++ L R++ R +D DD + ++ + D
Sbjct: 377 ---------ANERHEIRSSKLSGTRRIGAKRNDDD-----DDSLFAMETPAFRFSDESSD 436
Query: 185 VVKR----RRGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGA 244
+V + R + I L L+ I+M +W+FS+ + + +++ + +++++ LG
Sbjct: 437 IVDKPATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGK 496
Query: 245 KGCWKQALSVVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYP 304
G W++ L V+EW+ + +K R +YT L VLG +R+P EAL +F+ M YP
Sbjct: 497 LGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYP 556
Query: 305 DMAAYHSIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILN 364
DM AY SIAVTLGQAG +K+L VI+ MR P KK + L+ WDP +EPD+V+YNA+LN
Sbjct: 557 DMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLN 616
Query: 365 ACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSG 424
AC+ +W+G +WV QL++ G +P+ TYGL ME VML KY +H+ F KM+KS
Sbjct: 617 ACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME---VMLACEKYNLVHEFFRKMQKS- 676
Query: 425 ETLKANTYRGSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRW 484
A YR LV W+EG A+ V DME RG+VGSA++YY+LA CLC GR
Sbjct: 677 SIPNALAYR----VLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRC 736
Query: 485 QDAL-----VEVEKMKTLSHM----------------------KPLVVTFTGMILSSFDG 544
+ L V +K + ++ KPLVVT+TG+I + D
Sbjct: 737 NEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDS 796
Query: 545 GHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRSSNSSAV 604
G+I + IF+ MK+ C PN+ T N MLK Y + +F +A++LF+++ + NSS
Sbjct: 797 GNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDF 856
Query: 605 PS-LVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASRAGKWY 663
S ++PD YT+ +ML+ A +W+ F YREM G+ + ++ +++EASRAGK
Sbjct: 857 ESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEE 916
BLAST of Lsi01G008910 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 2.5e-23
Identity = 97/424 (22.88%), Postives = 175/424 (41.27%), Query Frame = 0
Query: 221 QLLKILDALGAKGCWKQALSVVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIF 280
+LL L LG + AL +W K + V ++++LG + A +F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 281 NLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEGMRQQ------------------ 340
N ++ DG D+ +Y S+ +G ++ + V + M +
Sbjct: 197 NGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 256
Query: 341 ---PSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 400
P K+ + K + PD YN ++ C + VF +++ +G +
Sbjct: 257 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 316
Query: 401 TYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYRGSFIFLVKAFWEEGNVSGA 460
TY ++V KS + ++ K+ +M +G + TY L+ A+ +G + A
Sbjct: 317 TYNALLDVYG---KSHRPKEAMKVLNEMVLNGFSPSIVTYNS----LISAYARDGMLDEA 376
Query: 461 IEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMIL 520
+E M ++G Y L G+ + A+ E+M+ + KP + TF I
Sbjct: 377 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIK 436
Query: 521 SSFDGGHIDDCISIFEYMKQ-NCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRS 580
+ G + + IF+ + P+I T NT+L V+G+N M S+ +F+E+KR
Sbjct: 437 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR----- 496
Query: 581 SNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASR 623
VP+ T+ +++ A + +E VYR M +G D S Y +L +R
Sbjct: 497 ------AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 540
BLAST of Lsi01G008910 vs. ExPASy Swiss-Prot
Match:
B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 1.0e-16
Identity = 102/502 (20.32%), Postives = 196/502 (39.04%), Query Frame = 0
Query: 242 VEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAV 301
V + LK+ H+ Y LL V G A EAL++ M +G PD Y+ +A
Sbjct: 265 VAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG-CQPDAVTYNELAG 324
Query: 302 TLGQAGLLKQLLKVIEGMRQQ---PSKKVRNKCLKSW------DPAVE-----------P 361
T +AG ++ + ++ M + P+ N + ++ D A+ P
Sbjct: 325 TYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVP 384
Query: 362 DLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLH 421
++ YN +L + + + ++ +SG PN T+ +LAV K G + +
Sbjct: 385 NVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWN---TMLAVCGKRGMEDYVT 444
Query: 422 KLFTKMKKSGETLKANTYRGSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYEL 481
++ M+ G L +TY L+ A+ G+ + A + +M G + Y L
Sbjct: 445 RVLEGMRSCGVELSRDTYN----TLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNAL 504
Query: 482 ACCLCYNGRWQDALVEVEKMKTLSH----------------------------------- 541
L G W A V KM+T
Sbjct: 505 LNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGA 564
Query: 542 MKPLVVTFTGMILSSFDGGHIDDCISIFEYMK-QNCVPNIGTINTMLKVYGRNDMFSKAK 601
+ P V +++++F +D + F+ +K + P++ N+ML +Y +N M+SKA
Sbjct: 565 VFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKAT 624
Query: 602 DLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQ-WEYFENVYREMALSGHRL 661
++F+ IKR L PD TY S+++ A + WE + + + +
Sbjct: 625 EVFDSIKRS-----------GLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKP 684
Query: 662 DQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLV 684
D Y ++ + G ++ G P + + ++ ++ + + +A ++
Sbjct: 685 DVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVI 744
BLAST of Lsi01G008910 vs. ExPASy Swiss-Prot
Match:
Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 8.6e-16
Identity = 102/459 (22.22%), Postives = 182/459 (39.65%), Query Frame = 0
Query: 239 LSVVEWVY-SLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYH 298
+ ++ VY +K + F Y LL L K A ++ M G PD +Y
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG-CCPDAVSYT 221
Query: 299 SIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTL 358
++ ++ + GL+K+ ++ E EP + +YNA++N
Sbjct: 222 TVISSMCEVGLVKEGRELAE--------------------RFEPVVSVYNALINGLCKEH 281
Query: 359 EWKGVYWVFTQLRKSGLRPNGATYG-------------LSMEVLAVMLKSGKYEQLHKLF 418
++KG + + ++ + G+ PN +Y L+ L MLK G + ++ L
Sbjct: 282 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 341
Query: 419 TKMKKSGETLKANTY----------RG--------SFIFLVKAFWEEGNVSGAIEAVRDM 478
+ +K G L+ T+ RG ++ LV+ F GN+ A+ M
Sbjct: 342 SLVK--GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 401
Query: 479 EQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGH 538
E+ G + Y L G A+ KM T S P VV +T M+ +
Sbjct: 402 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT-SGCCPNVVVYTNMVEALCRHSK 461
Query: 539 IDDCISIFEYM-KQNCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRSSNSSAVP 598
+ S+ E M K+NC P++ T N +K A+ +F +++++ P
Sbjct: 462 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ------HRCPP 521
Query: 599 SLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASRAGKWYLL 658
++V TY +L+ A A + E + RE+ + G S Y LL + AG +
Sbjct: 522 NIV----TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 581
Query: 659 DHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLV 665
++ G+ P + +IL Q E+A ++
Sbjct: 582 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
BLAST of Lsi01G008910 vs. ExPASy TrEMBL
Match:
A0A6J1ILT7 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477629 PE=4 SV=1)
HSP 1 Score: 1515.4 bits (3922), Expect = 0.0e+00
Identity = 771/871 (88.52%), Postives = 807/871 (92.65%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTNA +PSPK EPD EKIKR L+QKGV PTPKIVRSL KKEIQKHNRKL+RLAERQ
Sbjct: 20 MEALSTNASVPSPKFEPDIEKIKRTLVQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 79
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
QSPPLSESQKQLI EETHFLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVNLKE
Sbjct: 80 NAQSPPLSESQKQLIEEETHFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEH 139
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRTEYNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELKEEWL SENGH D VKRR
Sbjct: 140 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLGSENGHSDAVKRR 199
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMI+SGLQFNEGQLLKILD+LGAKGCWKQALS
Sbjct: 200 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDSLGAKGCWKQALS 259
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 260 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 319
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLK+IE MRQQPSKKVRN C K WDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 320 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACIPTLEWK 379
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
VYWVFTQLRK+GL+PNGATYGLSME VMLKSGKYEQ+H LFTKMK SG TLKANTYR
Sbjct: 380 SVYWVFTQLRKNGLKPNGATYGLSME---VMLKSGKYEQVHMLFTKMKNSGSTLKANTYR 439
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCY+GRWQDALVEVEK
Sbjct: 440 ----VLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEK 499
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTINTMLKV+GRNDM
Sbjct: 500 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDM 559
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDL+EEIKRKAD SS SSAV S+VPD+YTY SML+AAASA QWEYFENVYREMALS
Sbjct: 560 FSKAKDLYEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALS 619
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+AMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA
Sbjct: 620 GYRLDQSKHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 679
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
+TLVRTM YAPFQVSERQWTELFEGN DR+CWNNLKKLSDAL CDASEATVSNLS SLQ
Sbjct: 680 ITLVRTMSYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVSNLSNSLQ 739
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK IPENTSQS+A DHD TDGLQLPGSE ++M+LHLDHV+DCC+ SLDI PVN HA
Sbjct: 740 SLCKRGIPENTSQSIASDHDTTDGLQLPGSENKKNMKLHLDHVTDCCEGSLDIIPVN-HA 799
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLN DSKM PWSLS+S+GVLET +F DRSNNE STFDL DDSEDDEEEL+MLLDGF
Sbjct: 800 SLN----CDSKMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGF 859
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHP 872
DDSY SNLP V+EILKTW+EERK DGL+LHP
Sbjct: 860 DDSYVSNLPSVDEILKTWEEERKNDGLYLHP 878
BLAST of Lsi01G008910 vs. ExPASy TrEMBL
Match:
A0A6J1GG29 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453855 PE=4 SV=1)
HSP 1 Score: 1513.8 bits (3918), Expect = 0.0e+00
Identity = 770/871 (88.40%), Postives = 805/871 (92.42%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTNA +PSPK EPD EKIKR LLQKGV PTPKIVRSL KKEIQKHNRKL+RLAERQ
Sbjct: 44 MEALSTNASVPSPKFEPDIEKIKRTLLQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 103
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
QSPPLSESQKQLI EET FLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVNLKEL
Sbjct: 104 DAQSPPLSESQKQLIQEETQFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEL 163
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRTEYNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELK+EWL SENGH D VKRR
Sbjct: 164 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKDEWLGSENGHSDAVKRR 223
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMI+SGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 224 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDALGAKGCWKQALS 283
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 284 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 343
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLK+IE MRQQPSKKVRN C K WDPAVEPDLVIYNAILNAC+PTLEWK
Sbjct: 344 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACVPTLEWK 403
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
VYWVFTQLRK+GL+PNGATYGLSME VMLKSGKYEQ+H LFTKMK SG TLKANTYR
Sbjct: 404 SVYWVFTQLRKNGLKPNGATYGLSME---VMLKSGKYEQVHMLFTKMKNSGSTLKANTYR 463
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCY+GRWQDALVEVEK
Sbjct: 464 ----VLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEK 523
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTINTMLKV+GRNDM
Sbjct: 524 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDM 583
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDL+EEIKRKAD SS SSAV S+VPD+YTY SML+AAASA QWEYFENVYREMALS
Sbjct: 584 FSKAKDLYEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALS 643
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+AMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA
Sbjct: 644 GYRLDQSKHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 703
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTM YAPFQVSERQWTELFEGN DR+CWNNLKKLSDAL CDASEATV NLS SLQ
Sbjct: 704 VTLVRTMSYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVLNLSSSLQ 763
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK IPEN SQS+A DHD TDGLQLPG E M++M+LHLDH +DCC+ SLDI PVN HA
Sbjct: 764 SLCKRGIPENASQSIASDHDTTDGLQLPGPENMKNMKLHLDHATDCCEGSLDIIPVN-HA 823
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLN DS+M PWSLS+S+GVLET +F DRSNNE STFDL DDSEDDEEEL+MLLDGF
Sbjct: 824 SLN----CDSEMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGF 883
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHP 872
DDSYDSNLP V+EILKTWKEERK DGL+LHP
Sbjct: 884 DDSYDSNLPSVDEILKTWKEERKNDGLYLHP 902
BLAST of Lsi01G008910 vs. ExPASy TrEMBL
Match:
A0A5D3CLI0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003990 PE=4 SV=1)
HSP 1 Score: 1502.6 bits (3889), Expect = 0.0e+00
Identity = 768/873 (87.97%), Postives = 809/873 (92.67%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEAL++NAPIPSPK EPDT+KIKR LLQKGV PTP+IVRSLRKKEIQK+NRKL+RLAERQ
Sbjct: 1 MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
+DQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN EL
Sbjct: 61 SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TG RT YNRD+LKKESLRELRKLFE RKLE+L+W LDDDVELKEEWL+SENG D VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSS PISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLKVIE MRQQPSKKVRNKC KSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
GVYWVFTQLRKSGLRPNGATYGLSME VMLKSGKYEQLH LFTKMKKSGETLKANTYR
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSME---VMLKSGKYEQLHNLFTKMKKSGETLKANTYR 420
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGN GAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEK
Sbjct: 421 ----VLVKAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEK 480
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSF+GGHIDDCISIFEYMKQ C PNIGTINTMLKVYGRNDM
Sbjct: 481 MKTLSHMKPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM 540
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDLFEEIK+KAD SS++SAVPSL+PDEYTY SML+AAAS+LQWEYFENVYREMALS
Sbjct: 541 FSKAKDLFEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALS 600
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+A+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQ+NYEQA
Sbjct: 601 GYRLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQA 660
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTMGYAPFQVSERQWTELFEGN DR+C NNLK+L DALG CDASEATVSNLSRSLQ
Sbjct: 661 VTLVRTMGYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQ 720
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK I E+TSQS+ACD +ATDGL+LP S+ ME+M+LH D D+SLDI PV+ HA
Sbjct: 721 SLCKFGILESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQ-----DESLDIIPVD-HA 780
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLNMKV S+S MSPWS SIS+GVL T QF D SNNE STFD D+SEDDE ELNMLLDGF
Sbjct: 781 SLNMKVNSESNMSPWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGF 840
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHPLN 874
DDSYDSNLP NEIL+TWKEERK DGLFLHPLN
Sbjct: 841 DDSYDSNLPAANEILETWKEERKADGLFLHPLN 860
BLAST of Lsi01G008910 vs. ExPASy TrEMBL
Match:
A0A1S3B127 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484858 PE=4 SV=1)
HSP 1 Score: 1502.6 bits (3889), Expect = 0.0e+00
Identity = 768/873 (87.97%), Postives = 809/873 (92.67%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEAL++NAPIPSPK EPDT+KIKR LLQKGV PTP+IVRSLRKKEIQK+NRKL+RLAERQ
Sbjct: 1 MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
+DQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN EL
Sbjct: 61 SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TG RT YNRD+LKKESLRELRKLFE RKLE+L+W LDDDVELKEEWL+SENG D VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSS PISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLKVIE MRQQPSKKVRNKC KSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
GVYWVFTQLRKSGLRPNGATYGLSME VMLKSGKYEQLH LFTKMKKSGETLKANTYR
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSME---VMLKSGKYEQLHNLFTKMKKSGETLKANTYR 420
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGN GAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEK
Sbjct: 421 ----VLVKAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEK 480
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSF+GGHIDDCISIFEYMKQ C PNIGTINTMLKVYGRNDM
Sbjct: 481 MKTLSHMKPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM 540
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDLFEEIK+KAD SS++SAVPSL+PDEYTY SML+AAAS+LQWEYFENVYREMALS
Sbjct: 541 FSKAKDLFEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALS 600
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+A+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQ+NYEQA
Sbjct: 601 GYRLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQA 660
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTMGYAPFQVSERQWTELFEGN DR+C NNLK+L DALG CDASEATVSNLSRSLQ
Sbjct: 661 VTLVRTMGYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQ 720
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK I E+TSQS+ACD +ATDGL+LP S+ ME+M+LH D D+SLDI PV+ HA
Sbjct: 721 SLCKFGILESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQ-----DESLDIIPVD-HA 780
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLNMKV S+S MSPWS SIS+GVL T QF D SNNE STFD D+SEDDE ELNMLLDGF
Sbjct: 781 SLNMKVNSESNMSPWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGF 840
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHPLN 874
DDSYDSNLP NEIL+TWKEERK DGLFLHPLN
Sbjct: 841 DDSYDSNLPAANEILETWKEERKADGLFLHPLN 860
BLAST of Lsi01G008910 vs. ExPASy TrEMBL
Match:
A0A0A0KFY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495690 PE=4 SV=1)
HSP 1 Score: 1499.2 bits (3880), Expect = 0.0e+00
Identity = 769/873 (88.09%), Postives = 807/873 (92.44%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEAL++N PIPSPK EPDT+KIKR LLQKGV PTP+IVRSLRKKEIQK+NRKL+R+AERQ
Sbjct: 1 MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
+ QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN KEL
Sbjct: 61 SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TG RT YNRD+LKKESLRELRKLFE RKLE+ QW LDDDVELKEEWLESEN DVVKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSS PISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLKVIE MRQQPSKKVRNKC KSWDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
GVYWVFTQLRKSGLRPNGATYGLSME VMLKSGKYEQLH LFTKMKK+G+TLKANTYR
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSME---VMLKSGKYEQLHNLFTKMKKNGQTLKANTYR 420
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEK
Sbjct: 421 ----VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEK 480
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMI SSF+GGHIDDCISIFEYMKQ C PNIGTINTMLKVYGRNDM
Sbjct: 481 MKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDM 540
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
+SKAKDLFEEIKRKAD SS+ SAVPSLVPDEYTY SMLEAAAS+LQWEYFE+VYREMALS
Sbjct: 541 YSKAKDLFEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALS 600
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G++LDQSK+A+LLVEAS+AGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA
Sbjct: 601 GYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTMGYAPFQVSERQWTELFEGN DR+ NNLK+L ALG CDASEATVSNLSRSLQ
Sbjct: 661 VTLVRTMGYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQ 720
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK DIPENTSQSVACDHDATD LQLP SE ME+M+LH D D+SLDI PV+ HA
Sbjct: 721 SLCKFDIPENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVD-HA 780
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLNMKV S+SKMSPWS+SIS+G L T QF D SNN S FDLC +SEDDEEELN LLD F
Sbjct: 781 SLNMKVNSESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEF 840
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHPLN 874
DD+YDSNLP VNEIL+TWKEERK DGLFLH LN
Sbjct: 841 DDAYDSNLPAVNEILETWKEERKADGLFLHSLN 860
BLAST of Lsi01G008910 vs. NCBI nr
Match:
XP_038881786.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 1573.1 bits (4072), Expect = 0.0e+00
Identity = 797/873 (91.29%), Postives = 827/873 (94.73%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTN+PIPSPK EPD EKIKR L+ KGV PTP+IVRSLRKKEIQK+NRKL+RL ERQ
Sbjct: 1 MEALSTNSPIPSPKFEPDIEKIKRTLVHKGVHPTPRIVRSLRKKEIQKYNRKLKRLTERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL
Sbjct: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRT YNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELKEEWLESEN H D ++RR
Sbjct: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLESENDHRDAMERR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLGM+RKPQEALQIF+LMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMSRKPQEALQIFHLMRGDGQIYPDMAAYHSIA 300
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLKV+E MRQQPS+KVRNKC KSWDPAVEPDLV+YNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVVECMRQQPSRKVRNKCRKSWDPAVEPDLVVYNAILNACIPTLEWK 360
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
GVYWVFTQLRKSGLRPNGATYGLSME VMLKSGKYEQLHKLFTK+KKSGETLKANTYR
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSME---VMLKSGKYEQLHKLFTKLKKSGETLKANTYR 420
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK
Sbjct: 421 ----VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTIN+MLKVYGRNDM
Sbjct: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINSMLKVYGRNDM 540
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
F KAKDLFEEIKRKAD SS+SSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS
Sbjct: 541 FLKAKDLFEEIKRKADCSSHSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+A LLVEASRAGKWYLLDHAFD+ILEAGQIPHPLLFTEMIL LTTQDNYEQA
Sbjct: 601 GYRLDQSKHARLLVEASRAGKWYLLDHAFDSILEAGQIPHPLLFTEMILHLTTQDNYEQA 660
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTMGYAPFQVSERQWTELFEGN DR+CW NLKKL DALG CDASEATVSNLSRSLQ
Sbjct: 661 VTLVRTMGYAPFQVSERQWTELFEGNRDRICWKNLKKLLDALGNCDASEATVSNLSRSLQ 720
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCKL IPENTSQSVACDHD TDGLQLPGSE E+M+LH D V+DCCD+SLDI PVN HA
Sbjct: 721 SLCKLGIPENTSQSVACDHDVTDGLQLPGSENTENMKLHPDRVTDCCDESLDIIPVN-HA 780
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLNMKVKSDS++SPWS S SEGVL TDQF DRS NE+ST DLCDDSEDDEE LNMLLDGF
Sbjct: 781 SLNMKVKSDSEVSPWSQSSSEGVLGTDQFSDRSINELSTIDLCDDSEDDEEGLNMLLDGF 840
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHPLN 874
DDSYDSNLP VNEILKTWKEERKTDGLFLHPLN
Sbjct: 841 DDSYDSNLPSVNEILKTWKEERKTDGLFLHPLN 865
BLAST of Lsi01G008910 vs. NCBI nr
Match:
XP_038881784.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 1565.8 bits (4053), Expect = 0.0e+00
Identity = 797/881 (90.47%), Postives = 827/881 (93.87%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTN+PIPSPK EPD EKIKR L+ KGV PTP+IVRSLRKKEIQK+NRKL+RL ERQ
Sbjct: 1 MEALSTNSPIPSPKFEPDIEKIKRTLVHKGVHPTPRIVRSLRKKEIQKYNRKLKRLTERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL
Sbjct: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRT YNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELKEEWLESEN H D ++RR
Sbjct: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLESENDHRDAMERR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMR--------GDGQIYPD 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLGM+RKPQEALQIF+LMR GDGQIYPD
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMSRKPQEALQIFHLMRICYSYLIQGDGQIYPD 300
Query: 301 MAAYHSIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNA 360
MAAYHSIAVTLGQAGLLKQLLKV+E MRQQPS+KVRNKC KSWDPAVEPDLV+YNAILNA
Sbjct: 301 MAAYHSIAVTLGQAGLLKQLLKVVECMRQQPSRKVRNKCRKSWDPAVEPDLVVYNAILNA 360
Query: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGE 420
CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSME VMLKSGKYEQLHKLFTK+KKSGE
Sbjct: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSME---VMLKSGKYEQLHKLFTKLKKSGE 420
Query: 421 TLKANTYRGSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQ 480
TLKANTYR LVKAFWEEGNV+GAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQ
Sbjct: 421 TLKANTYR----VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQ 480
Query: 481 DALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTML 540
DALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTIN+ML
Sbjct: 481 DALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINSML 540
Query: 541 KVYGRNDMFSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFEN 600
KVYGRNDMF KAKDLFEEIKRKAD SS+SSAVPSLVPDEYTYGSMLEAAASALQWEYFEN
Sbjct: 541 KVYGRNDMFLKAKDLFEEIKRKADCSSHSSAVPSLVPDEYTYGSMLEAAASALQWEYFEN 600
Query: 601 VYREMALSGHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLT 660
VYREMALSG+RLDQSK+A LLVEASRAGKWYLLDHAFD+ILEAGQIPHPLLFTEMIL LT
Sbjct: 601 VYREMALSGYRLDQSKHARLLVEASRAGKWYLLDHAFDSILEAGQIPHPLLFTEMILHLT 660
Query: 661 TQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATV 720
TQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGN DR+CW NLKKL DALG CDASEATV
Sbjct: 661 TQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNRDRICWKNLKKLLDALGNCDASEATV 720
Query: 721 SNLSRSLQSLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLD 780
SNLSRSLQSLCKL IPENTSQSVACDHD TDGLQLPGSE E+M+LH D V+DCCD+SLD
Sbjct: 721 SNLSRSLQSLCKLGIPENTSQSVACDHDVTDGLQLPGSENTENMKLHPDRVTDCCDESLD 780
Query: 781 ITPVNSHASLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEE 840
I PVN HASLNMKVKSDS++SPWS S SEGVL TDQF DRS NE+ST DLCDDSEDDEE
Sbjct: 781 IIPVN-HASLNMKVKSDSEVSPWSQSSSEGVLGTDQFSDRSINELSTIDLCDDSEDDEEG 840
Query: 841 LNMLLDGFDDSYDSNLPPVNEILKTWKEERKTDGLFLHPLN 874
LNMLLDGFDDSYDSNLP VNEILKTWKEERKTDGLFLHPLN
Sbjct: 841 LNMLLDGFDDSYDSNLPSVNEILKTWKEERKTDGLFLHPLN 873
BLAST of Lsi01G008910 vs. NCBI nr
Match:
XP_023543129.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1520.8 bits (3936), Expect = 0.0e+00
Identity = 774/871 (88.86%), Postives = 807/871 (92.65%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTNA +PSPK EPD EKIKR LLQKGV PTPKIVRSL KKEIQKHNRKL+RLAERQ
Sbjct: 1 MEALSTNASVPSPKFEPDIEKIKRTLLQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 60
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
QSPPLSESQKQLI EETHFLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVNLKEL
Sbjct: 61 DAQSPPLSESQKQLIEEETHFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEL 120
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRTEYNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELKEEWL SENG D VKRR
Sbjct: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLGSENGQSDAVKRR 180
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMI+SGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDALGAKGCWKQALS 240
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLK+IE MRQQPSKKVRN C K WDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKIIECMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACIPTLEWK 360
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
VYWVFTQLRK+GL+PNGATYGLSME VMLKSGKYEQ+H LFTKMK SG TLKANTYR
Sbjct: 361 SVYWVFTQLRKNGLKPNGATYGLSME---VMLKSGKYEQVHMLFTKMKNSGSTLKANTYR 420
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCY+GRWQDALVEVEK
Sbjct: 421 ----VLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEK 480
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTINTMLKV+GRNDM
Sbjct: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDM 540
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDL+EEIKRKAD SS SSAV S+VPD+YTY SML+AAASA QWEYFENVYREMALS
Sbjct: 541 FSKAKDLYEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALS 600
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+AMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTE+ILQLTTQDNYEQA
Sbjct: 601 GYRLDQSKHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTELILQLTTQDNYEQA 660
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTM YAPFQVSERQWTE+FEGN DR+CWNNLKKLSDAL CDASEATVSNLSRSLQ
Sbjct: 661 VTLVRTMSYAPFQVSERQWTEVFEGNTDRICWNNLKKLSDALSDCDASEATVSNLSRSLQ 720
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
LCK IPENTSQS+ DHD TDGLQLPGSE ME+M+LHLDHV+DCC+ SLDI PVN HA
Sbjct: 721 PLCKRGIPENTSQSIVSDHDTTDGLQLPGSENMENMKLHLDHVTDCCEGSLDIIPVN-HA 780
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLN DSKM PWSLS+S+GVLET +F DRSNNE STFDL DDSEDDEEEL+MLLDGF
Sbjct: 781 SLN----CDSKMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGF 840
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHP 872
DD YDSNLP V+EILKTWKEERK DGL+LHP
Sbjct: 841 DDPYDSNLPSVDEILKTWKEERKNDGLYLHP 859
BLAST of Lsi01G008910 vs. NCBI nr
Match:
XP_022977260.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1515.4 bits (3922), Expect = 0.0e+00
Identity = 771/871 (88.52%), Postives = 807/871 (92.65%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTNA +PSPK EPD EKIKR L+QKGV PTPKIVRSL KKEIQKHNRKL+RLAERQ
Sbjct: 20 MEALSTNASVPSPKFEPDIEKIKRTLVQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 79
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
QSPPLSESQKQLI EETHFLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVNLKE
Sbjct: 80 NAQSPPLSESQKQLIEEETHFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEH 139
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRTEYNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELKEEWL SENGH D VKRR
Sbjct: 140 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKEEWLGSENGHSDAVKRR 199
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMI+SGLQFNEGQLLKILD+LGAKGCWKQALS
Sbjct: 200 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDSLGAKGCWKQALS 259
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 260 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 319
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLK+IE MRQQPSKKVRN C K WDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 320 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACIPTLEWK 379
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
VYWVFTQLRK+GL+PNGATYGLSME VMLKSGKYEQ+H LFTKMK SG TLKANTYR
Sbjct: 380 SVYWVFTQLRKNGLKPNGATYGLSME---VMLKSGKYEQVHMLFTKMKNSGSTLKANTYR 439
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCY+GRWQDALVEVEK
Sbjct: 440 ----VLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEK 499
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTINTMLKV+GRNDM
Sbjct: 500 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDM 559
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDL+EEIKRKAD SS SSAV S+VPD+YTY SML+AAASA QWEYFENVYREMALS
Sbjct: 560 FSKAKDLYEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALS 619
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+AMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA
Sbjct: 620 GYRLDQSKHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 679
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
+TLVRTM YAPFQVSERQWTELFEGN DR+CWNNLKKLSDAL CDASEATVSNLS SLQ
Sbjct: 680 ITLVRTMSYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVSNLSNSLQ 739
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK IPENTSQS+A DHD TDGLQLPGSE ++M+LHLDHV+DCC+ SLDI PVN HA
Sbjct: 740 SLCKRGIPENTSQSIASDHDTTDGLQLPGSENKKNMKLHLDHVTDCCEGSLDIIPVN-HA 799
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLN DSKM PWSLS+S+GVLET +F DRSNNE STFDL DDSEDDEEEL+MLLDGF
Sbjct: 800 SLN----CDSKMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGF 859
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHP 872
DDSY SNLP V+EILKTW+EERK DGL+LHP
Sbjct: 860 DDSYVSNLPSVDEILKTWEEERKNDGLYLHP 878
BLAST of Lsi01G008910 vs. NCBI nr
Match:
XP_022950896.1 (pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1513.8 bits (3918), Expect = 0.0e+00
Identity = 770/871 (88.40%), Postives = 805/871 (92.42%), Query Frame = 0
Query: 1 MEALSTNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQ 60
MEALSTNA +PSPK EPD EKIKR LLQKGV PTPKIVRSL KKEIQKHNRKL+RLAERQ
Sbjct: 44 MEALSTNASVPSPKFEPDIEKIKRTLLQKGVHPTPKIVRSLCKKEIQKHNRKLKRLAERQ 103
Query: 61 ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
QSPPLSESQKQLI EET FLTLRSEYKEFSKAIEA+PAGGLMVGRPWERLERVNLKEL
Sbjct: 104 DAQSPPLSESQKQLIQEETQFLTLRSEYKEFSKAIEARPAGGLMVGRPWERLERVNLKEL 163
Query: 121 TGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRR 180
TGFRTEYNRDNLKKESLRELRKLFEARKLE+LQWVLDDDVELK+EWL SENGH D VKRR
Sbjct: 164 TGFRTEYNRDNLKKESLRELRKLFEARKLEELQWVLDDDVELKDEWLGSENGHSDAVKRR 223
Query: 181 RGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
RGDGE+IRFLVDRLSSRPISMRDWKFSRMMI+SGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 224 RGDGEVIRFLVDRLSSRPISMRDWKFSRMMIQSGLQFNEGQLLKILDALGAKGCWKQALS 283
Query: 241 VVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300
VVEWVY+LKSHSHSKSRFVYTKLLAVLG ARKPQEALQIFNLMRGDGQIYPDMAAYHSIA
Sbjct: 284 VVEWVYNLKSHSHSKSRFVYTKLLAVLGKARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 343
Query: 301 VTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWK 360
VTLGQAGLLKQLLK+IE MRQQPSKKVRN C K WDPAVEPDLVIYNAILNAC+PTLEWK
Sbjct: 344 VTLGQAGLLKQLLKIIEYMRQQPSKKVRNMCRKYWDPAVEPDLVIYNAILNACVPTLEWK 403
Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
VYWVFTQLRK+GL+PNGATYGLSME VMLKSGKYEQ+H LFTKMK SG TLKANTYR
Sbjct: 404 SVYWVFTQLRKNGLKPNGATYGLSME---VMLKSGKYEQVHMLFTKMKNSGSTLKANTYR 463
Query: 421 GSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEK 480
LVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCY+GRWQDALVEVEK
Sbjct: 464 ----VLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYHGRWQDALVEVEK 523
Query: 481 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDM 540
MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQ C PNIGTINTMLKV+GRNDM
Sbjct: 524 MKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQKCAPNIGTINTMLKVFGRNDM 583
Query: 541 FSKAKDLFEEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALS 600
FSKAKDL+EEIKRKAD SS SSAV S+VPD+YTY SML+AAASA QWEYFENVYREMALS
Sbjct: 584 FSKAKDLYEEIKRKADHSSQSSAVSSIVPDQYTYDSMLQAAASAQQWEYFENVYREMALS 643
Query: 601 GHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 660
G+RLDQSK+AMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA
Sbjct: 644 GYRLDQSKHAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQA 703
Query: 661 VTLVRTMGYAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCDASEATVSNLSRSLQ 720
VTLVRTM YAPFQVSERQWTELFEGN DR+CWNNLKKLSDAL CDASEATV NLS SLQ
Sbjct: 704 VTLVRTMSYAPFQVSERQWTELFEGNTDRICWNNLKKLSDALSDCDASEATVLNLSSSLQ 763
Query: 721 SLCKLDIPENTSQSVACDHDATDGLQLPGSEIMESMELHLDHVSDCCDKSLDITPVNSHA 780
SLCK IPEN SQS+A DHD TDGLQLPG E M++M+LHLDH +DCC+ SLDI PVN HA
Sbjct: 764 SLCKRGIPENASQSIASDHDTTDGLQLPGPENMKNMKLHLDHATDCCEGSLDIIPVN-HA 823
Query: 781 SLNMKVKSDSKMSPWSLSISEGVLETDQFPDRSNNEISTFDLCDDSEDDEEELNMLLDGF 840
SLN DS+M PWSLS+S+GVLET +F DRSNNE STFDL DDSEDDEEEL+MLLDGF
Sbjct: 824 SLN----CDSEMPPWSLSLSDGVLETGKFSDRSNNERSTFDLRDDSEDDEEELSMLLDGF 883
Query: 841 DDSYDSNLPPVNEILKTWKEERKTDGLFLHP 872
DDSYDSNLP V+EILKTWKEERK DGL+LHP
Sbjct: 884 DDSYDSNLPSVDEILKTWKEERKNDGLYLHP 902
BLAST of Lsi01G008910 vs. TAIR 10
Match:
AT5G67570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 837.8 bits (2163), Expect = 8.0e-243
Identity = 432/716 (60.34%), Postives = 544/716 (75.98%), Query Frame = 0
Query: 13 PKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQKHNRKLERLAERQADQSPPLSESQK 72
P+ EPD EKIKRRLL+ GV PTPKI+ +LRKKEIQKHNR+ +R E +A+ +E+QK
Sbjct: 17 PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAE---VYTEAQK 76
Query: 73 QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNLKELTG--FRTEYN 132
Q + EE F TLR EYK+F+++I K G GLMVG PWE +ERV LKEL R E +
Sbjct: 77 QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136
Query: 133 RDNLKKESLRELRKLFEARKLEDLQWVLDDDVELKEEWLESENGHCDVVKRRRGDGEIIR 192
LKKE+L+EL+K+ E +DL+WVLDDDV+++E L+ E D KR R +GE +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196
Query: 193 FLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYSL 252
LVDRLS R I+ + WKF RMM +SGLQF E Q+LKI+D LG K WKQA +VV WVYS
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256
Query: 253 KSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
K H +SRFVYTKLL+VLG AR+PQEALQIFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316
Query: 313 LKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
LK+LLKVIE MRQ+P+K +N K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376
Query: 373 LRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYRGSFIFLVK 432
LRK+GLRPNGATYGL+ME VML+SGK++++H F KMK SGE KA TY+ LV+
Sbjct: 377 LRKNGLRPNGATYGLAME---VMLESGKFDRVHDFFRKMKSSGEAPKAITYK----VLVR 436
Query: 433 AFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMK 492
A W EG + A+EAVRDMEQ+GV+G+ SVYYELACCLC NGRW DA++EV +MK L + +
Sbjct: 437 ALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCR 496
Query: 493 PLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDMFSKAKDLF 552
PL +TFTG+I +S +GGH+DDC++IF+YMK C PNIGT N MLKVYGRNDMFS+AK+LF
Sbjct: 497 PLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELF 556
Query: 553 EEIKRKADRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSK 612
EEI + + LVP+EYTY MLEA+A +LQWEYFE+VY+ M LSG+++DQ+K
Sbjct: 557 EEIVSRKE--------THLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTK 616
Query: 613 YAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMG 672
+A +L+EASRAGKW LL+HAFD +LE G+IPHPL FTE++ T + ++++A+TL+ T+
Sbjct: 617 HASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVA 676
Query: 673 YAPFQVSERQWTELFEGNMDRLCWNNLKKLSDALGYCD-ASEATVSNLSRSLQSLC 724
A FQ+SE +WT+LFE + D L +NL KLSD L CD SE TVSNLS+SL+S C
Sbjct: 677 LASFQISEEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707
BLAST of Lsi01G008910 vs. TAIR 10
Match:
AT1G30610.2 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 343.2 bits (879), Expect = 6.1e-94
Identity = 219/672 (32.59%), Postives = 362/672 (53.87%), Query Frame = 0
Query: 5 STNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQ--KHNRKLERLAE---- 64
S + + PK E + ++ + + I R + E++ R+++R+A+
Sbjct: 257 SGESSVTMPKDESFRRRYSKQEHHRSSDTSRGIARGSKGDELELVVEERRVQRIAKDVRW 316
Query: 65 RQADQS-PPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAG-GLMVGRPWERLERVN 124
++D+S P+SE + + + S+ IE G GL + R+ER+
Sbjct: 317 SKSDESLVPVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGDGLDLLAEERRIERL- 376
Query: 125 LKELTGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDV-ELKEEWLESENGHCD 184
R ++ L R++ R +D DD + ++ + D
Sbjct: 377 ---------ANERHEIRSSKLSGTRRIGAKRNDDD-----DDSLFAMETPAFRFSDESSD 436
Query: 185 VVKR----RRGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGA 244
+V + R + I L L+ I+M +W+FS+ + + +++ + +++++ LG
Sbjct: 437 IVDKPATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGK 496
Query: 245 KGCWKQALSVVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYP 304
G W++ L V+EW+ + +K R +YT L VLG +R+P EAL +F+ M YP
Sbjct: 497 LGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYP 556
Query: 305 DMAAYHSIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILN 364
DM AY SIAVTLGQAG +K+L VI+ MR P KK + L+ WDP +EPD+V+YNA+LN
Sbjct: 557 DMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLN 616
Query: 365 ACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSG 424
AC+ +W+G +WV QL++ G +P+ TYGL ME VML KY +H+ F KM+KS
Sbjct: 617 ACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME---VMLACEKYNLVHEFFRKMQKS- 676
Query: 425 ETLKANTYRGSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRW 484
A YR LV W+EG A+ V DME RG+VGSA++YY+LA CLC GR
Sbjct: 677 SIPNALAYR----VLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRC 736
Query: 485 QDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYMKQNCVPNIGTINTM 544
+ L ++K+ +++ KPLVVT+TG+I + D G+I + IF+ MK+ C PN+ T N M
Sbjct: 737 NEGLNMLKKICRVAN-KPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIM 796
Query: 545 LKVYGRNDMFSKAKDLFEEIKRKADRSSNSSAVPS-LVPDEYTYGSMLEAAASALQWEYF 604
LK Y + +F +A++LF+++ + NSS S ++PD YT+ +ML+ A +W+ F
Sbjct: 797 LKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDF 856
Query: 605 ENVYREMALSGHRLDQSKYAMLLVEASRAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQ 663
YREM G+ + ++ +++EASRAGK +++ ++ + + +IP L E +
Sbjct: 857 GYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFR 904
BLAST of Lsi01G008910 vs. TAIR 10
Match:
AT1G30610.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 331.3 bits (848), Expect = 2.4e-90
Identity = 220/699 (31.47%), Postives = 361/699 (51.65%), Query Frame = 0
Query: 5 STNAPIPSPKSEPDTEKIKRRLLQKGVLPTPKIVRSLRKKEIQ--KHNRKLERLAE---- 64
S + + PK E + ++ + + I R + E++ R+++R+A+
Sbjct: 257 SGESSVTMPKDESFRRRYSKQEHHRSSDTSRGIARGSKGDELELVVEERRVQRIAKDVRW 316
Query: 65 RQADQS-PPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAG-GLMVGRPWERLERVN 124
++D+S P+SE + + + S+ IE G GL + R+ER+
Sbjct: 317 SKSDESLVPVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGDGLDLLAEERRIERL- 376
Query: 125 LKELTGFRTEYNRDNLKKESLRELRKLFEARKLEDLQWVLDDDV-ELKEEWLESENGHCD 184
R ++ L R++ R +D DD + ++ + D
Sbjct: 377 ---------ANERHEIRSSKLSGTRRIGAKRNDDD-----DDSLFAMETPAFRFSDESSD 436
Query: 185 VVKR----RRGDGEIIRFLVDRLSSRPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGA 244
+V + R + I L L+ I+M +W+FS+ + + +++ + +++++ LG
Sbjct: 437 IVDKPATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGK 496
Query: 245 KGCWKQALSVVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYP 304
G W++ L V+EW+ + +K R +YT L VLG +R+P EAL +F+ M YP
Sbjct: 497 LGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYP 556
Query: 305 DMAAYHSIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILN 364
DM AY SIAVTLGQAG +K+L VI+ MR P KK + L+ WDP +EPD+V+YNA+LN
Sbjct: 557 DMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLN 616
Query: 365 ACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSG 424
AC+ +W+G +WV QL++ G +P+ TYGL ME VML KY +H+ F KM+KS
Sbjct: 617 ACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME---VMLACEKYNLVHEFFRKMQKS- 676
Query: 425 ETLKANTYRGSFIFLVKAFWEEGNVSGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRW 484
A YR LV W+EG A+ V DME RG+VGSA++YY+LA CLC GR
Sbjct: 677 SIPNALAYR----VLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRC 736
Query: 485 QDAL-----VEVEKMKTLSHM----------------------KPLVVTFTGMILSSFDG 544
+ L V +K + ++ KPLVVT+TG+I + D
Sbjct: 737 NEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDS 796
Query: 545 GHIDDCISIFEYMKQNCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRSSNSSAV 604
G+I + IF+ MK+ C PN+ T N MLK Y + +F +A++LF+++ + NSS
Sbjct: 797 GNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDF 856
Query: 605 PS-LVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASRAGKWY 663
S ++PD YT+ +ML+ A +W+ F YREM G+ + ++ +++EASRAGK
Sbjct: 857 ESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEE 916
BLAST of Lsi01G008910 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 112.5 bits (280), Expect = 1.8e-24
Identity = 97/424 (22.88%), Postives = 175/424 (41.27%), Query Frame = 0
Query: 221 QLLKILDALGAKGCWKQALSVVEWVYSLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIF 280
+LL L LG + AL +W K + V ++++LG + A +F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 281 NLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEGMRQQ------------------ 340
N ++ DG D+ +Y S+ +G ++ + V + M +
Sbjct: 197 NGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 256
Query: 341 ---PSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 400
P K+ + K + PD YN ++ C + VF +++ +G +
Sbjct: 257 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 316
Query: 401 TYGLSMEVLAVMLKSGKYEQLHKLFTKMKKSGETLKANTYRGSFIFLVKAFWEEGNVSGA 460
TY ++V KS + ++ K+ +M +G + TY L+ A+ +G + A
Sbjct: 317 TYNALLDVYG---KSHRPKEAMKVLNEMVLNGFSPSIVTYNS----LISAYARDGMLDEA 376
Query: 461 IEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMIL 520
+E M ++G Y L G+ + A+ E+M+ + KP + TF I
Sbjct: 377 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIK 436
Query: 521 SSFDGGHIDDCISIFEYMKQ-NCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRS 580
+ G + + IF+ + P+I T NT+L V+G+N M S+ +F+E+KR
Sbjct: 437 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR----- 496
Query: 581 SNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASR 623
VP+ T+ +++ A + +E VYR M +G D S Y +L +R
Sbjct: 497 ------AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 540
BLAST of Lsi01G008910 vs. TAIR 10
Match:
AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 87.4 bits (215), Expect = 6.1e-17
Identity = 102/459 (22.22%), Postives = 182/459 (39.65%), Query Frame = 0
Query: 239 LSVVEWVY-SLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYH 298
+ ++ VY +K + F Y LL L K A ++ M G PD +Y
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG-CCPDAVSYT 221
Query: 299 SIAVTLGQAGLLKQLLKVIEGMRQQPSKKVRNKCLKSWDPAVEPDLVIYNAILNACIPTL 358
++ ++ + GL+K+ ++ E EP + +YNA++N
Sbjct: 222 TVISSMCEVGLVKEGRELAE--------------------RFEPVVSVYNALINGLCKEH 281
Query: 359 EWKGVYWVFTQLRKSGLRPNGATYG-------------LSMEVLAVMLKSGKYEQLHKLF 418
++KG + + ++ + G+ PN +Y L+ L MLK G + ++ L
Sbjct: 282 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 341
Query: 419 TKMKKSGETLKANTY----------RG--------SFIFLVKAFWEEGNVSGAIEAVRDM 478
+ +K G L+ T+ RG ++ LV+ F GN+ A+ M
Sbjct: 342 SLVK--GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 401
Query: 479 EQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGH 538
E+ G + Y L G A+ KM T S P VV +T M+ +
Sbjct: 402 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT-SGCCPNVVVYTNMVEALCRHSK 461
Query: 539 IDDCISIFEYM-KQNCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKADRSSNSSAVP 598
+ S+ E M K+NC P++ T N +K A+ +F +++++ P
Sbjct: 462 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ------HRCPP 521
Query: 599 SLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGHRLDQSKYAMLLVEASRAGKWYLL 658
++V TY +L+ A A + E + RE+ + G S Y LL + AG +
Sbjct: 522 NIV----TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 581
Query: 659 DHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLV 665
++ G+ P + +IL Q E+A ++
Sbjct: 582 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FJW6 | 1.1e-241 | 60.34 | Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop... | [more] |
Q9SA76 | 3.4e-89 | 31.47 | Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop... | [more] |
Q9LYZ9 | 2.5e-23 | 22.88 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
B8Y6I0 | 1.0e-16 | 20.32 | Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... | [more] |
Q9M302 | 8.6e-16 | 22.22 | Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ILT7 | 0.0e+00 | 88.52 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbit... | [more] |
A0A6J1GG29 | 0.0e+00 | 88.40 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucurbit... | [more] |
A0A5D3CLI0 | 0.0e+00 | 87.97 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B127 | 0.0e+00 | 87.97 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Cucumis ... | [more] |
A0A0A0KFY8 | 0.0e+00 | 88.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495690 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_038881786.1 | 0.0e+00 | 91.29 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X2 ... | [more] |
XP_038881784.1 | 0.0e+00 | 90.47 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic isoform X1 ... | [more] |
XP_023543129.1 | 0.0e+00 | 88.86 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita ... | [more] |
XP_022977260.1 | 0.0e+00 | 88.52 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita ... | [more] |
XP_022950896.1 | 0.0e+00 | 88.40 | pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
AT5G67570.1 | 8.0e-243 | 60.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G30610.2 | 6.1e-94 | 32.59 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G30610.1 | 2.4e-90 | 31.47 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G02860.1 | 1.8e-24 | 22.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G48810.1 | 6.1e-17 | 22.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |