Lsi01G008400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G008400
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SPT2 homolog
Locationchr01: 6691835 .. 6695538 (+)
RNA-Seq ExpressionLsi01G008400
SyntenyLsi01G008400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGGGTTTGATTTATTTGAATTCATTCTTTCGTTCGCTTTTTTTACGATGGGTTTTCGTTCTTGTACGATTGTTCTCGTTGTTGTCTATAAACTGTTATTCGCAAAATCAAGTTCGATCCGTTTGATTTGATTAGATTGGAGATTTCAAGTACAGTTTTTGTTTTTTGGTTTTGGTTTTGGTTTGATAAAATTGGCCAAGGGTTATTATTATTAGTGTTGGAGCGAGAAATCATATTTCAACGGGCGACCTGGTAATTTTGATCCGAGAATTAGGGTAATTATTGATGAGATGATCTTAATTCTTGAAGCGCAGAATAACCTCTTTTTGTGTTTGAAGTTTTAAAATTGATGGAATTCTGGACTAACCTACGTTGTGATGTGTGGAGATTTTCCTCATTCAGCTTAAGAAGAAGCTGCCTTTTATTCCCATGAAATATAATGTTATTAGTCGATAAATTTATTTATAATTTTTGCAATTATATACCTTGGCTGTGGTTTTTGTTTTCATTATAAATTCAGTTTGTTTTATTTTATTTTGCATTTTCAAATTTGAATCGTATGAAGTCCTCATGCTTGATGTAGAAACATGGGATGCCATCTTGAAAGATGTTAAAAAATATACATACTGAAGTTTATACTATTAATCTTGTTGTGTAGCATAAAGGAACATTCGATGGAAGACTATGAGGGGTATGAAGAGTATGATGAATATGAAGATGATGAGCAAATGGATGAAGAAGAGGAGGAGGAATATGAAGAGGTGGAGGACCCTAAGCCTACCAAGGAAGAAATAGAATATCTTGAACTAAGGCAACGACTGAAAGAAAAAATTAGGAGGCAGTCAAAAAAGGATGGCGGTTCTCACTTGAAGTCTAATGACAAGAAGAAGCTTCCTTATGACAAGTAAGTTTCAGCCTGAAGCTCTTCATGATGGGGTTTCGAACTTTTGATCATAGCATCTTTGTGGATTTATTTTCCCATGTTTTCCCGTTGGTAGTTTATAGTGTTGAAGTTAGTTTAAAGTAAAAATGTTTGTCATGGTACATGATAAGGGCCATAGAGAATCATGTTTTTTTCATGATATAAATCGAAGTTTATTTATTTTTTGGATCTTAGATTGCCGGTAAGTCTTTGAAAAATCTATGCAAGGTTTTCTAGTGCGTCTTTTCTGTCTTTTCTCCTTTTAGTTCCAATAAATCTGTGCCAGCAGATGGTTTGTGTTGCAGTGAAAACATTGTTCCTTAGTATGAACCCAAAATGCATATTACTTCCAACTATACACTTTTTAACATCTCAAATCGGGTGTTAATGTTTGAAATTTTATGTTAATTGCTGCAGTTTTGGGTCATTCTTTGGACCTTCTCAACCTGTCATTTCTCAAAGAGTAATTCAAGAAAGCAAGTCATTATTAGAAAACCAGCACTTGGCATCTAGGGTTTCTGACCACGTTCATGGTGTAAGTATCATAACCTTCATATTGTAACTAGTTACACTTTTGTGTATTTTTGTGTTTAAAGACTGATAGGAGAAAAAAGCTATATTTTTTGGGAAAAATAAACTTTTTTTTATTACATAAATCAAACATTGATTGTTGAGACGGTTCTTTTATTGCTCAGCTACCTTGAACATGCATGTTATATAATGTTTGCGATGTAGATTTCATGGTATACTCACATGGTTACATAACTTGATTATTTATGCGAAAAACTTCATTCAATATTCTGTTATTGATAAGATGCCTGGGTGAAAAATTTGTTTATTTGGTGGTATTCTACTGGCTGTTTCATGTAGACTGAAATGCTCAACCAATTAGCAGAATCAAATGTGGGAAAAGGATTTTGCACAATCTCATGCATCTGCAATTTTATCTTTTGAGAGCATTTATTAATGGTCTTCGAAGATATTAAACCTGATGATTATGCTTGTGTTGGCAGAATAAGAAGAGTCAAGGTTCAAACAGTGCAGCTCCCAAACCTAGGGTTCCACCAAAAGCCGTAAATGAGGTATTTTGGCATTTCTTTGTTAGATTATAATCTCTTTCTCTTCCACATTGTTGGATTTGATGGATATAATGGATTATTTTGCAGAAGCTAACAAAAGTTCAAAAACTAAAGGACACCAGAGACTACTCCTTTCTATTTTCTGAGGATGCACATGTTCCTGCTCCTACGAAAGAGTCCTCAAGAAGTGTTTCTGCTCCAAGTACTGGTACGTTGCTGTTGGATCATGTCAATTGTAGCGGTCATGTTTTACTTAGAAGCTTATTATCTTTTTTAAACTTTTTAACTTTTTTTAATAAAATTAGAATATACATGGAATGAGAGAACTAATTTTTGTTTCTTTGGTCCTGTTTTAGAGGCACGTTCAGCTCATGTTCCCATGAAAAGTAAGCAGCCTCTGAGTAATCCTCGTCAGAATATTCATGTCGGCCATAAAGATAAGAAATCCGTTCCTATGAATGGGCAAATGCAGTCCAAAAACAAGTCAGCATCTTCTGGCAATCCCAATTTGTCTATGATGAAGGCTAAGAAACAATTGGGTAATAGCTGCAACGGGAATGGTCCTGGCCGGCCAATGGGAAATAGCAATGGGAATGGTCCTGGCCGGCCAATTGGAAATAGCAACAATGGGAACGGTCCTGGCCGGCCGATGGGTAATAGCAACAATGGGAATGGTCCTGGCCGGCCACTGGGTAATAGCAACAACGGGAATGGTCCTGGCCGGCCAATGGTGGCACGAAAAGCCTCATCTGCTGCCGTGCAGAAGAAGCCTTCTCTACCAGGTACAAAGAATTCTGTACCTGGTGTGCACAAGGCATTACCGCCGAAAAGGCTTGAAGATAAGAGGAATGACATGCGTCCACCTGCTAAGGCCAAAGTAGCACCGAGTCGGCCAGTATCAGCGTCAAGACCTCAGGTTATACGTCTTCTCATGCTAAACTCACGTTCAATTTGTTTAGAAATAATTTCCTTAGCTGGTGCTGGATGTACAACTCTTAACCAACTTTGCGATGAAACTAACAGATAAGTAAGGCACCAGCACAAAGACAAGTTTCATCACGTCCAGCTGTGAATGATCAGCGACCGAAGAAAAGGCCTGCAAGACGATACTCTGATGAAGAGGATGATGCCGAGGGTGATGAAGCTATTAGTCTGATCAGAAAAATGTTCGGGTATAAACTTCAATTCATTGATCTCATTCTTATTTAGTAGTCAATTTCAGAGGAGAGAAGGCCCTTGACACCAGACAAATGGTTTGATGCATGTTATTGTGTTGTCATGAGCATGCAAATCTAAACGTATTCCTACACAGTAATTGTGTTAGAATTATTTCCAACTTTGGTTTTCGGTATATTCTGATATCAATTCATCCCAACACTCCGTTTTTGGCTTCTCTGCAGATATAATCCTGCAAAATTTTCCCGAGATGATGATGATAGCGATATGGAGGCCAATTTCGACGATATTATGATGGAGGAGAAAAGAAGGTAAAGCTGGGAATTTAGTCATGCAGTACATATTTATGTTCTCTTAGAACTTGTGGGTTTCTCCTTCATTGTATATTTACATATTTACTTGCCATACAGTGCAAAAATAGCAAGGAAGGAGGATGAAGAACAACTTCGTCTGATCCAGGAAGAAGAAGAACGGGAGAGGCGTGCGAGAATAAAAAGACTTAAAAGATCGAAGGGAAGCAGTTAG

mRNA sequence

GTTAGGCATAAAGGAACATTCGATGGAAGACTATGAGGGGTATGAAGAGTATGATGAATATGAAGATGATGAGCAAATGGATGAAGAAGAGGAGGAGGAATATGAAGAGGTGGAGGACCCTAAGCCTACCAAGGAAGAAATAGAATATCTTGAACTAAGGCAACGACTGAAAGAAAAAATTAGGAGGCAGTCAAAAAAGGATGGCGGTTCTCACTTGAAGTCTAATGACAAGAAGAAGCTTCCTTATGACAATTTTGGGTCATTCTTTGGACCTTCTCAACCTGTCATTTCTCAAAGAGTAATTCAAGAAAGCAAGTCATTATTAGAAAACCAGCACTTGGCATCTAGGGTTTCTGACCACGTTCATGGTAATAAGAAGAGTCAAGGTTCAAACAGTGCAGCTCCCAAACCTAGGGTTCCACCAAAAGCCGTAAATGAGAAGCTAACAAAAGTTCAAAAACTAAAGGACACCAGAGACTACTCCTTTCTATTTTCTGAGGATGCACATGTTCCTGCTCCTACGAAAGAGTCCTCAAGAAGTGTTTCTGCTCCAAGTACTGGTACGTTGCTGTTGGATCATGTCAATTGTAGCGAATATACATGGAATGAGAGAACTAATTTTTGTTTCTTTGGTCCTGTTTTAGAGGCACGTTCAGCTCATGTTCCCATGAAAAGTAAGCAGCCTCTGAGTAATCCTCGTCAGAATATTCATGTCGGCCATAAAGATAAGAAATCCGTTCCTATGAATGGGCAAATGCAGTCCAAAAACAAGTCAGCATCTTCTGGCAATCCCAATTTGTCTATGATGAAGGCTAAGAAACAATTGGGTAATAGCTGCAACGGGAATGGTCCTGGCCGGCCAATGGGAAATAGCAATGGGAATGGTCCTGGCCGGCCAATTGGAAATAGCAACAATGGGAACGGTCCTGGCCGGCCGATGGGTAATAGCAACAATGGGAATGGTCCTGGCCGGCCACTGGGTAATAGCAACAACGGGAATGGTCCTGGCCGGCCAATGGTGGCACGAAAAGCCTCATCTGCTGCCGTGCAGAAGAAGCCTTCTCTACCAGGTACAAAGAATTCTGTACCTGGTGTGCACAAGGCATTACCGCCGAAAAGGCTTGAAGATAAGAGGAATGACATGCGTCCACCTGCTAAGGCCAAAGTAGCACCGAGTCGGCCAGTATCAGCGTCAAGACCTCAGATAAGTAAGGCACCAGCACAAAGACAAGTTTCATCACGTCCAGCTGTGAATGATCAGCGACCGAAGAAAAGGCCTGCAAGACGATACTCTGATGAAGAGGATGATGCCGAGGGTGATGAAGCTATTAGTCTGATCAGAAAAATGTTCGGATATAATCCTGCAAAATTTTCCCGAGATGATGATGATAGCGATATGGAGGCCAATTTCGACGATATTATGATGGAGGAGAAAAGAAGTGCAAAAATAGCAAGGAAGGAGGATGAAGAACAACTTCGTCTGATCCAGGAAGAAGAAGAACGGGAGAGGCGTGCGAGAATAAAAAGACTTAAAAGATCGAAGGGAAGCAGTTAG

Coding sequence (CDS)

ATGGAAGACTATGAGGGGTATGAAGAGTATGATGAATATGAAGATGATGAGCAAATGGATGAAGAAGAGGAGGAGGAATATGAAGAGGTGGAGGACCCTAAGCCTACCAAGGAAGAAATAGAATATCTTGAACTAAGGCAACGACTGAAAGAAAAAATTAGGAGGCAGTCAAAAAAGGATGGCGGTTCTCACTTGAAGTCTAATGACAAGAAGAAGCTTCCTTATGACAATTTTGGGTCATTCTTTGGACCTTCTCAACCTGTCATTTCTCAAAGAGTAATTCAAGAAAGCAAGTCATTATTAGAAAACCAGCACTTGGCATCTAGGGTTTCTGACCACGTTCATGGTAATAAGAAGAGTCAAGGTTCAAACAGTGCAGCTCCCAAACCTAGGGTTCCACCAAAAGCCGTAAATGAGAAGCTAACAAAAGTTCAAAAACTAAAGGACACCAGAGACTACTCCTTTCTATTTTCTGAGGATGCACATGTTCCTGCTCCTACGAAAGAGTCCTCAAGAAGTGTTTCTGCTCCAAGTACTGGTACGTTGCTGTTGGATCATGTCAATTGTAGCGAATATACATGGAATGAGAGAACTAATTTTTGTTTCTTTGGTCCTGTTTTAGAGGCACGTTCAGCTCATGTTCCCATGAAAAGTAAGCAGCCTCTGAGTAATCCTCGTCAGAATATTCATGTCGGCCATAAAGATAAGAAATCCGTTCCTATGAATGGGCAAATGCAGTCCAAAAACAAGTCAGCATCTTCTGGCAATCCCAATTTGTCTATGATGAAGGCTAAGAAACAATTGGGTAATAGCTGCAACGGGAATGGTCCTGGCCGGCCAATGGGAAATAGCAATGGGAATGGTCCTGGCCGGCCAATTGGAAATAGCAACAATGGGAACGGTCCTGGCCGGCCGATGGGTAATAGCAACAATGGGAATGGTCCTGGCCGGCCACTGGGTAATAGCAACAACGGGAATGGTCCTGGCCGGCCAATGGTGGCACGAAAAGCCTCATCTGCTGCCGTGCAGAAGAAGCCTTCTCTACCAGGTACAAAGAATTCTGTACCTGGTGTGCACAAGGCATTACCGCCGAAAAGGCTTGAAGATAAGAGGAATGACATGCGTCCACCTGCTAAGGCCAAAGTAGCACCGAGTCGGCCAGTATCAGCGTCAAGACCTCAGATAAGTAAGGCACCAGCACAAAGACAAGTTTCATCACGTCCAGCTGTGAATGATCAGCGACCGAAGAAAAGGCCTGCAAGACGATACTCTGATGAAGAGGATGATGCCGAGGGTGATGAAGCTATTAGTCTGATCAGAAAAATGTTCGGATATAATCCTGCAAAATTTTCCCGAGATGATGATGATAGCGATATGGAGGCCAATTTCGACGATATTATGATGGAGGAGAAAAGAAGTGCAAAAATAGCAAGGAAGGAGGATGAAGAACAACTTCGTCTGATCCAGGAAGAAGAAGAACGGGAGAGGCGTGCGAGAATAAAAAGACTTAAAAGATCGAAGGGAAGCAGTTAG

Protein sequence

MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKDGGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKSQGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTGTLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVPMNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNSNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNSNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHKALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLKRSKGSS
Homology
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BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match: A0A1S3B163 (protein SPT2 homolog OS=Cucumis melo OX=3656 GN=LOC103484898 PE=3 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.3e-213
Identity = 436/536 (81.34%), Postives = 460/536 (85.82%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQM-DEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKK 60
           MEDYEGYE+YDEYEDD+QM +EEEEEEYEEVE PKPTKEE EYLELRQRLKEKIRRQSKK
Sbjct: 5   MEDYEGYEDYDEYEDDDQMEEEEEEEEYEEVEVPKPTKEEKEYLELRQRLKEKIRRQSKK 64

Query: 61  DGGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKK 120
           DG SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKK
Sbjct: 65  DGSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKK 124

Query: 121 SQGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPST 180
           SQGSNS A KP+V PK V+EK TKVQKLKDTRDYSFLFSEDA+VPAPTKESSRSV APST
Sbjct: 125 SQGSNSVASKPKVLPKVVSEKQTKVQKLKDTRDYSFLFSEDANVPAPTKESSRSVYAPST 184

Query: 181 GTLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSV 240
                                       EARSAHVPMKSKQPLSNPRQNIHV HK+KKSV
Sbjct: 185 ----------------------------EARSAHVPMKSKQPLSNPRQNIHVDHKEKKSV 244

Query: 241 PMNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN---------------- 300
           PMNG MQSKNKSASSGNPNLSMMKAKKQL NS +GNGPGRPMGN                
Sbjct: 245 PMNGLMQSKNKSASSGNPNLSMMKAKKQLANSGSGNGPGRPMGNNNGSGPGRPMGNSNSG 304

Query: 301 ----------SNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNSNNGNGPGRPMV 360
                     +NGNGPGRP+GNSNNGNGPGRP+GNSNNGNGPGRPLGNSNNGNGPGRPMV
Sbjct: 305 NRSGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPMV 364

Query: 361 ARKASSAAVQKKPSLPGTKNSVP-GVHKALPPKRLEDKRNDMRPPAKAKVAPSRPVSASR 420
           A KASSA +QKKPSLPGT+NSVP GVHK LP ++LEDKRNDMRPPAKAKVAPSRPVS+SR
Sbjct: 365 APKASSAVLQKKPSLPGTRNSVPAGVHKPLPSRKLEDKRNDMRPPAKAKVAPSRPVSSSR 424

Query: 421 PQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSR 480
           PQ++KAPAQRQVSSRPAVNDQR KKRPARRYSDEEDDAEG+EAISLIRKMFGYNP KFSR
Sbjct: 425 PQMTKAPAQRQVSSRPAVNDQRLKKRPARRYSDEEDDAEGEEAISLIRKMFGYNPGKFSR 484

Query: 481 DDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLKRSKG 509
           DDDDSDMEANFDDIMMEE+RSA+IARKEDEEQLRLIQEEEERERRAR+KRLKRS+G
Sbjct: 485 DDDDSDMEANFDDIMMEEQRSARIARKEDEEQLRLIQEEEERERRARLKRLKRSRG 512

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BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match: A0A0A0KLN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497170 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.9e-208
Identity = 430/548 (78.47%), Postives = 454/548 (82.85%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           MEDYEGYE+YDEYEDD+QM EEEEEEYEEVE PKPTKEE EYLELRQRLKEKIRRQSK+D
Sbjct: 5   MEDYEGYEDYDEYEDDDQM-EEEEEEYEEVEVPKPTKEEKEYLELRQRLKEKIRRQSKRD 64

Query: 61  GGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 120
           G SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS
Sbjct: 65  GSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKKS 124

Query: 121 QGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTG 180
           QGSNS A KPRV PK V+EK TKVQKLKDTRDYSFLFSEDA+VPAP+KESSRSV APST 
Sbjct: 125 QGSNSVASKPRVLPKVVSEKQTKVQKLKDTRDYSFLFSEDANVPAPSKESSRSVYAPST- 184

Query: 181 TLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVP 240
                                      EARSA VPMKSK P SNPRQNIHV HK+KKSVP
Sbjct: 185 ---------------------------EARSAQVPMKSKHPPSNPRQNIHVDHKEKKSVP 244

Query: 241 MNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN----------------- 300
           MNG MQSKNKSASSGN NLSMMKAKKQL NSC+GNGPGRPMGN                 
Sbjct: 245 MNGLMQSKNKSASSGNSNLSMMKAKKQLVNSCSGNGPGRPMGNNNESGPGRPMSNSNSGN 304

Query: 301 ----------------------SNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGN 360
                                 +NGNGPGRP+GNSNNGNGPGRP+GNSNNGNGPGRPLGN
Sbjct: 305 RSGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGN 364

Query: 361 SNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVP-GVHKALPPKRLEDKRNDMRPPAKA 420
           SNNGNGPGRPMVA KASSA +QK+PSLPGT+NSVP GVHK LP K+LEDKRNDMRPPAKA
Sbjct: 365 SNNGNGPGRPMVAPKASSAVLQKRPSLPGTRNSVPAGVHKPLPSKKLEDKRNDMRPPAKA 424

Query: 421 KVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIR 480
           KVAPSRPVS+SRPQ+SKAPA RQVSSRP VNDQRPKKRPARRYSDEEDDAEG+EAISLIR
Sbjct: 425 KVAPSRPVSSSRPQMSKAPAPRQVSSRPTVNDQRPKKRPARRYSDEEDDAEGEEAISLIR 484

Query: 481 KMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARI 509
           KMF YNP KFSRDDDDSDMEANFDDIMMEE+RSA+IARKEDEEQLRLIQEEEE+ERRAR+
Sbjct: 485 KMFRYNPRKFSRDDDDSDMEANFDDIMMEEQRSARIARKEDEEQLRLIQEEEEQERRARL 523

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BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match: A0A6J1GFI4 (protein SPT2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453709 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 3.0e-197
Identity = 415/546 (76.01%), Postives = 439/546 (80.40%), Query Frame = 0 

Query: 5   EGYEEYDEYEDDEQM-DEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKDGGS 64
           E Y+EYDEYEDD+QM +EEEEEEYEEV D KPTKEEI+YLELRQRLKE+IR+Q+KKDGGS
Sbjct: 6   EDYDEYDEYEDDDQMYEEEEEEEYEEVRDSKPTKEEIKYLELRQRLKERIRKQAKKDGGS 65

Query: 65  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKSQGS 124
           HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS GS
Sbjct: 66  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHNHGNKKSHGS 125

Query: 125 NSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTGTLL 184
           NSAA KP+ PP+ +NEK TKVQKLKDTRDYSFLFSEDAHVPA TKE S SV APST    
Sbjct: 126 NSAASKPKAPPRIINEKQTKVQKLKDTRDYSFLFSEDAHVPASTKEPSTSVFAPST---- 185

Query: 185 LDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVPMNG 244
                                   EARSAH+PMKSKQPLSNPRQNIHVGHKD KSVPMNG
Sbjct: 186 ------------------------EARSAHIPMKSKQPLSNPRQNIHVGHKDHKSVPMNG 245

Query: 245 QMQSKNKSASSGNPNLSMMKAKKQL-------------GNSCNGNGPGRPMGNSNGNGPG 304
           QM   NKSASS  PNLSMMKAKKQL             GNS +GNGPGRP+GNSNGNGPG
Sbjct: 246 QMHPNNKSASSCKPNLSMMKAKKQLGNSNHGNGPGRPVGNSNHGNGPGRPVGNSNGNGPG 305

Query: 305 RPIGNSNNGNGPGRPMGNSNNGNGP--------------------------GRPLGNSNN 364
           RP+GNSNNGNGPGRPMGNSNNGNGP                          GRP GNSNN
Sbjct: 306 RPVGNSNNGNGPGRPMGNSNNGNGPGRPQGYSNNRNGPGRPQGYSNHGNGIGRPQGNSNN 365

Query: 365 GNGPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHKALPPKRLEDKRNDMRPPAKAKVAP 424
           G+GPGRPMVA KASS+ VQKKPSLPG KNSVPGVHK LP K+LEDKRN+MR P+KAKVAP
Sbjct: 366 GSGPGRPMVAPKASSSHVQKKPSLPGMKNSVPGVHKPLPSKKLEDKRNEMRLPSKAKVAP 425

Query: 425 SRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIRKMFG 484
           +RP S SRPQISK P QRQ  SRP VNDQRPKKRPARRYSD+    EGDEAISLIRKMF 
Sbjct: 426 NRPAS-SRPQISKPPPQRQALSRPTVNDQRPKKRPARRYSDD----EGDEAISLIRKMFR 485

Query: 485 YNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLK 511
           YNPAKFS+DDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLK
Sbjct: 486 YNPAKFSQDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLK 518

[Close]
BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match: A0A6J1ILM2 (protein SPT2 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478135 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 8.1e-195
Identity = 412/560 (73.57%), Postives = 441/560 (78.75%), Query Frame = 0 

Query: 5   EGYEEYDEYEDDEQM-DEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKDGGS 64
           E Y+EYDEYEDD+QM +EEEEEEYEEV DPKPTKEEI+YLELRQRLKE+IR+Q+KKDGGS
Sbjct: 6   EDYDEYDEYEDDDQMYEEEEEEEYEEVRDPKPTKEEIKYLELRQRLKERIRKQAKKDGGS 65

Query: 65  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKSQGS 124
           HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS GS
Sbjct: 66  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKKSHGS 125

Query: 125 NSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTGTLL 184
           NSAA KP+ PPK +NEK TKVQKLKDTRDYSFLFSEDAHVPA TKE S SV APST    
Sbjct: 126 NSAASKPKAPPKIINEKQTKVQKLKDTRDYSFLFSEDAHVPASTKEPSTSVFAPST---- 185

Query: 185 LDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVPMNG 244
                                   EARSAH+PMKSKQPLSNPRQNIHVGHKD+KSVPMNG
Sbjct: 186 ------------------------EARSAHIPMKSKQPLSNPRQNIHVGHKDQKSVPMNG 245

Query: 245 QMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNSN--------------GNGP 304
           QM   NKS+SS  PNLSMMKAKKQLGNS +GNGPGRP+GNSN              GNGP
Sbjct: 246 QMHPNNKSSSSCKPNLSMMKAKKQLGNSNHGNGPGRPVGNSNHGNGPGRPVGNSNHGNGP 305

Query: 305 GRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNSNNGN----------------------- 364
           GRP+GNSN+GNGP RP+GNSNNGNGPGRP+GNSNNGN                       
Sbjct: 306 GRPVGNSNHGNGPCRPVGNSNNGNGPGRPMGNSNNGNGSGRPMGNTNNRNGPGRPQGYSN 365

Query: 365 ----------------GPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHKALPPKRLEDK 424
                           GPGRPMVA KASS+ +QKKPSLPG KNSVPGVHK LP K+LEDK
Sbjct: 366 HGNGIGRPQGNSNNGSGPGRPMVAPKASSSHMQKKPSLPGMKNSVPGVHKPLPSKKLEDK 425

Query: 425 RNDMRPPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDA 484
           RN+MR PAKAKVAP+RP + SRPQISK P QRQ  SRP +NDQRPKKRPARRYSD+    
Sbjct: 426 RNEMRLPAKAKVAPNRP-APSRPQISKPPPQRQALSRPTMNDQRPKKRPARRYSDD---- 485

Query: 485 EGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQE 511
           EGDEAISLIRKMF YNPAKFS+DDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQE
Sbjct: 486 EGDEAISLIRKMFRYNPAKFSQDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQE 532

[Close]
BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match: A0A6J1ISZ0 (protein SPT2 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478135 PE=3 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.7e-192
Identity = 411/573 (71.73%), Postives = 440/573 (76.79%), Query Frame = 0 

Query: 5   EGYEEYDEYEDDEQM-DEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKDGGS 64
           E Y+EYDEYEDD+QM +EEEEEEYEEV DPKPTKEEI+YLELRQRLKE+IR+Q+KKDGGS
Sbjct: 6   EDYDEYDEYEDDDQMYEEEEEEEYEEVRDPKPTKEEIKYLELRQRLKERIRKQAKKDGGS 65

Query: 65  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKSQGS 124
           HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS GS
Sbjct: 66  HLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKKSHGS 125

Query: 125 NSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTGTLL 184
           NSAA KP+ PPK +NEK TKVQKLKDTRDYSFLFSEDAHVPA TKE S SV APST    
Sbjct: 126 NSAASKPKAPPKIINEKQTKVQKLKDTRDYSFLFSEDAHVPASTKEPSTSVFAPST---- 185

Query: 185 LDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVPMNG 244
                                   EARSAH+PMKSKQPLSNPRQNIHVGHKD+KSVPMNG
Sbjct: 186 ------------------------EARSAHIPMKSKQPLSNPRQNIHVGHKDQKSVPMNG 245

Query: 245 QMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNSN------------------ 304
           QM   NKS+SS  PNLSMMKAKKQLGNS +GN PGRP+GNSN                  
Sbjct: 246 QMHPNNKSSSSCKPNLSMMKAKKQLGNSNHGNDPGRPVGNSNHGNGPGRPVGNSNHGNGP 305

Query: 305 ---------GNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNSNNGN---------- 364
                    GNGPGRP+GNSN+GNGP RP+GNSNNGNGPGRP+GNSNNGN          
Sbjct: 306 GRPVGNSNHGNGPGRPVGNSNHGNGPCRPVGNSNNGNGPGRPMGNSNNGNGSGRPMGNTN 365

Query: 365 -----------------------------GPGRPMVARKASSAAVQKKPSLPGTKNSVPG 424
                                        GPGRPMVA KASS+ +QKKPSLPG KNSVPG
Sbjct: 366 NRNGPGRPQGYSNHGNGIGRPQGNSNNGSGPGRPMVAPKASSSHMQKKPSLPGMKNSVPG 425

Query: 425 VHKALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKK 484
           VHK LP K+LEDKRN+MR PAKAKVAP+RP + SRPQISK P QRQ  SRP +NDQRPKK
Sbjct: 426 VHKPLPSKKLEDKRNEMRLPAKAKVAPNRP-APSRPQISKPPPQRQALSRPTMNDQRPKK 485

Query: 485 RPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIA 511
           RPARRYSD+    EGDEAISLIRKMF YNPAKFS+DDDDSDMEANFDDIMMEEKRSAKIA
Sbjct: 486 RPARRYSDD----EGDEAISLIRKMFRYNPAKFSQDDDDSDMEANFDDIMMEEKRSAKIA 545

[Close]
BLAST of Lsi01G008400 vs. NCBI nr
Match: XP_038881803.1 (protein SPT2 homolog isoform X1 [Benincasa hispida] >XP_038881804.1 protein SPT2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 800.0 bits (2065), Expect = 1.2e-227
Identity = 449/510 (88.04%), Postives = 463/510 (90.78%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           MEDYEGYEEYDEYEDD+QMDEE+EEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD
Sbjct: 5   MEDYEGYEEYDEYEDDDQMDEEQEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 64

Query: 61  GGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 120
           G SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS
Sbjct: 65  GSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 124

Query: 121 QGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTG 180
           QGSNS A KPRVPPK VNEK TKVQKLKDTRDYSFLFSEDA+VPAPTKESSRSV APST 
Sbjct: 125 QGSNSVASKPRVPPKVVNEKQTKVQKLKDTRDYSFLFSEDANVPAPTKESSRSVYAPST- 184

Query: 181 TLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVP 240
                                      EARSA VPMKSKQPL NPRQNIH GHKDKKSVP
Sbjct: 185 ---------------------------EARSAQVPMKSKQPLGNPRQNIHAGHKDKKSVP 244

Query: 241 MNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNSNGNGPGRPIGNSNNGN 300
           +NGQMQSKNKS SSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN+NG+GPGRPIGNSNNG+
Sbjct: 245 INGQMQSKNKSGSSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNNNGSGPGRPIGNSNNGH 304

Query: 301 GPGRPMGNSNNGNGPGRPLGNSNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHK 360
           GPGRPMGNS+N NGPGRPLGNSNNGNGPGRPMVA KASSA +QKKPSLPGTKNS PGVHK
Sbjct: 305 GPGRPMGNSSNVNGPGRPLGNSNNGNGPGRPMVAPKASSAVMQKKPSLPGTKNSAPGVHK 364

Query: 361 ALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPA 420
            LP K+LEDKRNDMRPPAKAKVAPSRPVS+SRPQISKAP QRQV SR AVNDQRPKKRPA
Sbjct: 365 PLPSKKLEDKRNDMRPPAKAKVAPSRPVSSSRPQISKAPTQRQVPSRLAVNDQRPKKRPA 424

Query: 421 RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKE 480
           RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDI+MEEKRSAKIARKE
Sbjct: 425 RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIVMEEKRSAKIARKE 484

Query: 481 DEEQLRLIQEEEERERRARIKRLKRSKGSS 511
           DEEQLRLIQEEEERERRARIKRLKR+KGSS
Sbjct: 485 DEEQLRLIQEEEERERRARIKRLKRAKGSS 486

[Close]
BLAST of Lsi01G008400 vs. NCBI nr
Match: XP_038881805.1 (protein SPT2 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 788.1 bits (2034), Expect = 4.5e-224
Identity = 446/510 (87.45%), Postives = 460/510 (90.20%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           MEDYEGYEEYDEYEDD+QMDEE+EEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD
Sbjct: 5   MEDYEGYEEYDEYEDDDQMDEEQEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 64

Query: 61  GGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 120
           G SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS
Sbjct: 65  GSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 124

Query: 121 QGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTG 180
           QGSNS A KPRVPPK    K TKVQKLKDTRDYSFLFSEDA+VPAPTKESSRSV APST 
Sbjct: 125 QGSNSVASKPRVPPK----KQTKVQKLKDTRDYSFLFSEDANVPAPTKESSRSVYAPST- 184

Query: 181 TLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVP 240
                                      EARSA VPMKSKQPL NPRQNIH GHKDKKSVP
Sbjct: 185 ---------------------------EARSAQVPMKSKQPLGNPRQNIHAGHKDKKSVP 244

Query: 241 MNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNSNGNGPGRPIGNSNNGN 300
           +NGQMQSKNKS SSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN+NG+GPGRPIGNSNNG+
Sbjct: 245 INGQMQSKNKSGSSGNPNLSMMKAKKQLGNSCNGNGPGRPMGNNNGSGPGRPIGNSNNGH 304

Query: 301 GPGRPMGNSNNGNGPGRPLGNSNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHK 360
           GPGRPMGNS+N NGPGRPLGNSNNGNGPGRPMVA KASSA +QKKPSLPGTKNS PGVHK
Sbjct: 305 GPGRPMGNSSNVNGPGRPLGNSNNGNGPGRPMVAPKASSAVMQKKPSLPGTKNSAPGVHK 364

Query: 361 ALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPA 420
            LP K+LEDKRNDMRPPAKAKVAPSRPVS+SRPQISKAP QRQV SR AVNDQRPKKRPA
Sbjct: 365 PLPSKKLEDKRNDMRPPAKAKVAPSRPVSSSRPQISKAPTQRQVPSRLAVNDQRPKKRPA 424

Query: 421 RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKE 480
           RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDI+MEEKRSAKIARKE
Sbjct: 425 RRYSDEEDDAEGDEAISLIRKMFGYNPAKFSRDDDDSDMEANFDDIVMEEKRSAKIARKE 482

Query: 481 DEEQLRLIQEEEERERRARIKRLKRSKGSS 511
           DEEQLRLIQEEEERERRARIKRLKR+KGSS
Sbjct: 485 DEEQLRLIQEEEERERRARIKRLKRAKGSS 482

[Close]
BLAST of Lsi01G008400 vs. NCBI nr
Match: XP_008440471.1 (PREDICTED: protein SPT2 homolog [Cucumis melo] >XP_008440472.1 PREDICTED: protein SPT2 homolog [Cucumis melo] >XP_008440473.1 PREDICTED: protein SPT2 homolog [Cucumis melo])

HSP 1 Score: 752.3 bits (1941), Expect = 2.8e-213
Identity = 436/536 (81.34%), Postives = 460/536 (85.82%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQM-DEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKK 60
           MEDYEGYE+YDEYEDD+QM +EEEEEEYEEVE PKPTKEE EYLELRQRLKEKIRRQSKK
Sbjct: 5   MEDYEGYEDYDEYEDDDQMEEEEEEEEYEEVEVPKPTKEEKEYLELRQRLKEKIRRQSKK 64

Query: 61  DGGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKK 120
           DG SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKK
Sbjct: 65  DGSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKK 124

Query: 121 SQGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPST 180
           SQGSNS A KP+V PK V+EK TKVQKLKDTRDYSFLFSEDA+VPAPTKESSRSV APST
Sbjct: 125 SQGSNSVASKPKVLPKVVSEKQTKVQKLKDTRDYSFLFSEDANVPAPTKESSRSVYAPST 184

Query: 181 GTLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSV 240
                                       EARSAHVPMKSKQPLSNPRQNIHV HK+KKSV
Sbjct: 185 ----------------------------EARSAHVPMKSKQPLSNPRQNIHVDHKEKKSV 244

Query: 241 PMNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN---------------- 300
           PMNG MQSKNKSASSGNPNLSMMKAKKQL NS +GNGPGRPMGN                
Sbjct: 245 PMNGLMQSKNKSASSGNPNLSMMKAKKQLANSGSGNGPGRPMGNNNGSGPGRPMGNSNSG 304

Query: 301 ----------SNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNSNNGNGPGRPMV 360
                     +NGNGPGRP+GNSNNGNGPGRP+GNSNNGNGPGRPLGNSNNGNGPGRPMV
Sbjct: 305 NRSGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPMV 364

Query: 361 ARKASSAAVQKKPSLPGTKNSVP-GVHKALPPKRLEDKRNDMRPPAKAKVAPSRPVSASR 420
           A KASSA +QKKPSLPGT+NSVP GVHK LP ++LEDKRNDMRPPAKAKVAPSRPVS+SR
Sbjct: 365 APKASSAVLQKKPSLPGTRNSVPAGVHKPLPSRKLEDKRNDMRPPAKAKVAPSRPVSSSR 424

Query: 421 PQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSR 480
           PQ++KAPAQRQVSSRPAVNDQR KKRPARRYSDEEDDAEG+EAISLIRKMFGYNP KFSR
Sbjct: 425 PQMTKAPAQRQVSSRPAVNDQRLKKRPARRYSDEEDDAEGEEAISLIRKMFGYNPGKFSR 484

Query: 481 DDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIKRLKRSKG 509
           DDDDSDMEANFDDIMMEE+RSA+IARKEDEEQLRLIQEEEERERRAR+KRLKRS+G
Sbjct: 485 DDDDSDMEANFDDIMMEEQRSARIARKEDEEQLRLIQEEEERERRARLKRLKRSRG 512

[Close]
BLAST of Lsi01G008400 vs. NCBI nr
Match: XP_004143538.1 (protein SPT2 homolog [Cucumis sativus] >XP_011657928.1 protein SPT2 homolog [Cucumis sativus])

HSP 1 Score: 734.6 bits (1895), Expect = 5.9e-208
Identity = 430/548 (78.47%), Postives = 454/548 (82.85%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           MEDYEGYE+YDEYEDD+QM EEEEEEYEEVE PKPTKEE EYLELRQRLKEKIRRQSK+D
Sbjct: 5   MEDYEGYEDYDEYEDDDQM-EEEEEEYEEVEVPKPTKEEKEYLELRQRLKEKIRRQSKRD 64

Query: 61  GGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 120
           G SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS
Sbjct: 65  GSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKKS 124

Query: 121 QGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTG 180
           QGSNS A KPRV PK V+EK TKVQKLKDTRDYSFLFSEDA+VPAP+KESSRSV APST 
Sbjct: 125 QGSNSVASKPRVLPKVVSEKQTKVQKLKDTRDYSFLFSEDANVPAPSKESSRSVYAPST- 184

Query: 181 TLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVP 240
                                      EARSA VPMKSK P SNPRQNIHV HK+KKSVP
Sbjct: 185 ---------------------------EARSAQVPMKSKHPPSNPRQNIHVDHKEKKSVP 244

Query: 241 MNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN----------------- 300
           MNG MQSKNKSASSGN NLSMMKAKKQL NSC+GNGPGRPMGN                 
Sbjct: 245 MNGLMQSKNKSASSGNSNLSMMKAKKQLVNSCSGNGPGRPMGNNNESGPGRPMSNSNSGN 304

Query: 301 ----------------------SNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGN 360
                                 +NGNGPGRP+GNSNNGNGPGRP+GNSNNGNGPGRPLGN
Sbjct: 305 RSGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGN 364

Query: 361 SNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVP-GVHKALPPKRLEDKRNDMRPPAKA 420
           SNNGNGPGRPMVA KASSA +QK+PSLPGT+NSVP GVHK LP K+LEDKRNDMRPPAKA
Sbjct: 365 SNNGNGPGRPMVAPKASSAVLQKRPSLPGTRNSVPAGVHKPLPSKKLEDKRNDMRPPAKA 424

Query: 421 KVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIR 480
           KVAPSRPVS+SRPQ+SKAPA RQVSSRP VNDQRPKKRPARRYSDEEDDAEG+EAISLIR
Sbjct: 425 KVAPSRPVSSSRPQMSKAPAPRQVSSRPTVNDQRPKKRPARRYSDEEDDAEGEEAISLIR 484

Query: 481 KMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARI 509
           KMF YNP KFSRDDDDSDMEANFDDIMMEE+RSA+IARKEDEEQLRLIQEEEE+ERRAR+
Sbjct: 485 KMFRYNPRKFSRDDDDSDMEANFDDIMMEEQRSARIARKEDEEQLRLIQEEEEQERRARL 523

[Close]
BLAST of Lsi01G008400 vs. NCBI nr
Match: KAE8647534.1 (hypothetical protein Csa_003728 [Cucumis sativus])

HSP 1 Score: 734.6 bits (1895), Expect = 5.9e-208
Identity = 430/548 (78.47%), Postives = 454/548 (82.85%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           MEDYEGYE+YDEYEDD+QM EEEEEEYEEVE PKPTKEE EYLELRQRLKEKIRRQSK+D
Sbjct: 24  MEDYEGYEDYDEYEDDDQM-EEEEEEYEEVEVPKPTKEEKEYLELRQRLKEKIRRQSKRD 83

Query: 61  GGSHLKSNDKKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKKS 120
           G SHLKSND+KKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDH HGNKKS
Sbjct: 84  GSSHLKSNDRKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHDHGNKKS 143

Query: 121 QGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTG 180
           QGSNS A KPRV PK V+EK TKVQKLKDTRDYSFLFSEDA+VPAP+KESSRSV APST 
Sbjct: 144 QGSNSVASKPRVLPKVVSEKQTKVQKLKDTRDYSFLFSEDANVPAPSKESSRSVYAPST- 203

Query: 181 TLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVP 240
                                      EARSA VPMKSK P SNPRQNIHV HK+KKSVP
Sbjct: 204 ---------------------------EARSAQVPMKSKHPPSNPRQNIHVDHKEKKSVP 263

Query: 241 MNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGPGRPMGN----------------- 300
           MNG MQSKNKSASSGN NLSMMKAKKQL NSC+GNGPGRPMGN                 
Sbjct: 264 MNGLMQSKNKSASSGNSNLSMMKAKKQLVNSCSGNGPGRPMGNNNESGPGRPMSNSNSGN 323

Query: 301 ----------------------SNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGN 360
                                 +NGNGPGRP+GNSNNGNGPGRP+GNSNNGNGPGRPLGN
Sbjct: 324 RSGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGNSNNGNGPGRPLGN 383

Query: 361 SNNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVP-GVHKALPPKRLEDKRNDMRPPAKA 420
           SNNGNGPGRPMVA KASSA +QK+PSLPGT+NSVP GVHK LP K+LEDKRNDMRPPAKA
Sbjct: 384 SNNGNGPGRPMVAPKASSAVLQKRPSLPGTRNSVPAGVHKPLPSKKLEDKRNDMRPPAKA 443

Query: 421 KVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIR 480
           KVAPSRPVS+SRPQ+SKAPA RQVSSRP VNDQRPKKRPARRYSDEEDDAEG+EAISLIR
Sbjct: 444 KVAPSRPVSSSRPQMSKAPAPRQVSSRPTVNDQRPKKRPARRYSDEEDDAEGEEAISLIR 503

Query: 481 KMFGYNPAKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARI 509
           KMF YNP KFSRDDDDSDMEANFDDIMMEE+RSA+IARKEDEEQLRLIQEEEE+ERRAR+
Sbjct: 504 KMFRYNPRKFSRDDDDSDMEANFDDIMMEEQRSARIARKEDEEQLRLIQEEEEQERRARL 542

[Close]
BLAST of Lsi01G008400 vs. TAIR 10
Match: AT2G22720.2 (SPT2 chromatin protein )

HSP 1 Score: 162.9 bits (411), Expect = 6.7e-40
Identity = 201/593 (33.90%), Postives = 298/593 (50.25%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           +++  GY++Y   ++DE  DEEEE+E       +P KEE+E+LE RQ+LKE IR++    
Sbjct: 111 LDEEAGYDDYYSGDEDEYEDEEEEDE-------EPPKEELEFLESRQKLKESIRKKMGNG 170

Query: 61  GGSHLKSND-KKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKK 120
             +   S + ++KLPY++FGSFFGPS+PVIS RVIQESKSLLEN+    ++S+     K+
Sbjct: 171 SANAQSSQERRRKLPYNDFGSFFGPSRPVISSRVIQESKSLLENE--LRKMSNSSQTKKR 230

Query: 121 ---SQGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKES-SRSVS 180
              + GS S        PK VNE   KV+ LKDTRDYSFLFS+DA +P P KES SRS S
Sbjct: 231 PVPTNGSGSKNVSQEKRPKVVNEVRRKVETLKDTRDYSFLFSDDAELPVPKKESLSRSGS 290

Query: 181 APSTGTLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVP-MKSKQPLS----------- 240
            P+           SE    + ++       +  R+AH P  + K+P+S           
Sbjct: 291 FPN-----------SEARSAQLSSRPKQSSGINGRTAHSPHREEKRPVSANGHSRPSSSG 350

Query: 241 ---NPRQNIHVGHKDKKSVP--------------MNGQMQSK-----NKSASSGN----- 300
              N  +    G K   S P                 QMQS+      + ASSG+     
Sbjct: 351 SQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSGSQMQSRAVSGSGRPASSGSQMQNS 410

Query: 301 --PNLSMMKAKKQLGNSCNGNGPGRPMGNSN----GNGPGRPIGNSNNGNGPGRPMGNSN 360
              N     A  Q+      +G  RP  + +     +G  RP G+S N   P RP G+ +
Sbjct: 411 RPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRP-GSSTNRQAPMRPPGSGS 470

Query: 361 NGNGPG-------------------------RPLGNSNNGNGPGRPMVARK--ASSAAVQ 420
             NG                           R   +S+NG GPGR     +   S ++++
Sbjct: 471 TMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSLE 530

Query: 421 KKPSLPGTKNSVPGVHK--------ALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQI 480
           +KPS+   K+S+    +        + P +R+ ++R   R  A  ++ P +    S+ Q+
Sbjct: 531 RKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKVSRDMATPRMIPKQSAPTSKHQM 590

Query: 481 SKAPAQRQVSSRPAVNDQR--PKKRPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSR- 506
              PA ++  SR   +++R   KK+PAR        +E  EA  ++R++    P +FSR 
Sbjct: 591 MSKPALKRPPSRDIDHERRLLKKKKPAR--------SEDQEAFDMLRQLL--PPKRFSRY 650

[Close]
BLAST of Lsi01G008400 vs. TAIR 10
Match: AT2G22720.3 (SPT2 chromatin protein )

HSP 1 Score: 162.9 bits (411), Expect = 6.7e-40
Identity = 201/593 (33.90%), Postives = 298/593 (50.25%), Query Frame = 0 

Query: 1   MEDYEGYEEYDEYEDDEQMDEEEEEEYEEVEDPKPTKEEIEYLELRQRLKEKIRRQSKKD 60
           +++  GY++Y   ++DE  DEEEE+E       +P KEE+E+LE RQ+LKE IR++    
Sbjct: 8   LDEEAGYDDYYSGDEDEYEDEEEEDE-------EPPKEELEFLESRQKLKESIRKKMGNG 67

Query: 61  GGSHLKSND-KKKLPYDNFGSFFGPSQPVISQRVIQESKSLLENQHLASRVSDHVHGNKK 120
             +   S + ++KLPY++FGSFFGPS+PVIS RVIQESKSLLEN+    ++S+     K+
Sbjct: 68  SANAQSSQERRRKLPYNDFGSFFGPSRPVISSRVIQESKSLLENE--LRKMSNSSQTKKR 127

Query: 121 ---SQGSNSAAPKPRVPPKAVNEKLTKVQKLKDTRDYSFLFSEDAHVPAPTKES-SRSVS 180
              + GS S        PK VNE   KV+ LKDTRDYSFLFS+DA +P P KES SRS S
Sbjct: 128 PVPTNGSGSKNVSQEKRPKVVNEVRRKVETLKDTRDYSFLFSDDAELPVPKKESLSRSGS 187

Query: 181 APSTGTLLLDHVNCSEYTWNERTNFCFFGPVLEARSAHVP-MKSKQPLS----------- 240
            P+           SE    + ++       +  R+AH P  + K+P+S           
Sbjct: 188 FPN-----------SEARSAQLSSRPKQSSGINGRTAHSPHREEKRPVSANGHSRPSSSG 247

Query: 241 ---NPRQNIHVGHKDKKSVP--------------MNGQMQSK-----NKSASSGN----- 300
              N  +    G K   S P                 QMQS+      + ASSG+     
Sbjct: 248 SQMNHSRPSSSGSKMNHSRPATSGSQMPNSRPASSGSQMQSRAVSGSGRPASSGSQMQNS 307

Query: 301 --PNLSMMKAKKQLGNSCNGNGPGRPMGNSN----GNGPGRPIGNSNNGNGPGRPMGNSN 360
              N     A  Q+      +G  RP  + +     +G  RP G+S N   P RP G+ +
Sbjct: 308 RPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRP-GSSTNRQAPMRPPGSGS 367

Query: 361 NGNGPG-------------------------RPLGNSNNGNGPGRPMVARK--ASSAAVQ 420
             NG                           R   +S+NG GPGR     +   S ++++
Sbjct: 368 TMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSLE 427

Query: 421 KKPSLPGTKNSVPGVHK--------ALPPKRLEDKRNDMRPPAKAKVAPSRPVSASRPQI 480
           +KPS+   K+S+    +        + P +R+ ++R   R  A  ++ P +    S+ Q+
Sbjct: 428 RKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKVSRDMATPRMIPKQSAPTSKHQM 487

Query: 481 SKAPAQRQVSSRPAVNDQR--PKKRPARRYSDEEDDAEGDEAISLIRKMFGYNPAKFSR- 506
              PA ++  SR   +++R   KK+PAR        +E  EA  ++R++    P +FSR 
Sbjct: 488 MSKPALKRPPSRDIDHERRLLKKKKPAR--------SEDQEAFDMLRQLL--PPKRFSRY 547

[Close]
BLAST of Lsi01G008400 vs. TAIR 10
Match: AT4G37860.1 (SPT2 chromatin protein )

HSP 1 Score: 96.7 bits (239), Expect = 5.9e-20
Identity = 138/486 (28.40%), Postives = 194/486 (39.92%), Query Frame = 0 

Query: 41  EYLELRQRLKEKIRRQSKKDGGSHLKS--------NDKKKLPYDNFGSFFGPSQPVISQR 100
           E+LELRQR+KE IR  +K   G  + +          K  LPYD FGSFFGPSQ VI+ R
Sbjct: 4   EFLELRQRIKESIR--TKMQSGDTIIAPTSQTQLHQSKSNLPYD-FGSFFGPSQTVIASR 63

Query: 101 VIQESKSLLENQHLASRVSDHVHG----------NKKSQGSNSAAPKPRVPPKAVNEKLT 160
           V+QESK LLEN+  A+++ + +                Q  +S         K  NE   
Sbjct: 64  VLQESKPLLENETSAAKMLNSIQNVCLIRSFFFTFLTLQKKSSVLMNDASGTKNANEVKR 123

Query: 161 KVQKLKDTRDYSFLFSEDAHVPAPTKESSRSVSAPSTGTLLLDHVNCSEYTWNERTNFCF 220
           K +KLKD RDYSFLFS+DA +P   KE     S PS+                       
Sbjct: 124 KAEKLKDGRDYSFLFSDDAQLPVSIKEP--PTSRPSS----------------------- 183

Query: 221 FGPVLEARSAHVPMKSKQPLSNPRQNIHVGHKDKKSVPMNGQMQSKNKSASSGNPNLSMM 280
                E++    P  S    ++ R++  +  + +KS+   GQ  SK              
Sbjct: 184 ----TESQMQPRPGSSNNVQAHTREDSAINSQKRKSMNKKGQPSSK-------------- 243

Query: 281 KAKKQLGNSCNGNGPGRPMGNSNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGRPLGNS 340
                LG+                                              RPL ++
Sbjct: 244 -----LGHQ---------------------------------------------RPLSST 303

Query: 341 NNGNGPGRPMVARKASSAAVQKKPSLPGTKNSVPGVHKALPPKRLEDKRNDMRPPAKAKV 400
                  +P+          Q+  SL  T++ +P                          
Sbjct: 304 -------KPLRHDSKQQRVEQRNVSLELTRSQLP-------------------------- 334

Query: 401 APSRPVSASRPQISKAPAQRQVSSRPAVNDQRPKKRPARRYSDEEDDAEGDEAISLIRKM 460
                           PA+ Q+ S+P +  +R KK+P +        +E D A+ ++RKM
Sbjct: 364 ----------------PAKHQLISKPPL--KRVKKKPVKM-------SEDDLALQMVRKM 334

Query: 461 FGYNP-AKFSRDDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEEERERRARIK 508
              +  A    D DD  MEANFDDIM EEKRS ++A+KED EQLRL+ EEEER RR + +
Sbjct: 424 CKTDRFAGRDEDYDDRCMEANFDDIMREEKRSERLAKKEDAEQLRLV-EEEERVRRQKKQ 334

[Close]
BLAST of Lsi01G008400 vs. TAIR 10
Match: AT2G22720.1 (SPT2 chromatin protein )

HSP 1 Score: 67.8 bits (164), Expect = 2.9e-11
Identity = 94/313 (30.03%), Postives = 155/313 (49.52%), Query Frame = 0 

Query: 218 SKQPLSNPRQNIHVGHKDKKSVPMNGQMQSKNKSASSGNPNLSMMKAKKQLGNSCNGNGP 277
           S +P S+  Q  +   ++ +      QMQ +  S+ S  P  S  +     G+       
Sbjct: 45  SGRPASSGSQMQNSRPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQ------ 104

Query: 278 GRPMGNSNGNGPGRPIGNSNNGNGPGRPMGNSNNGNGPGR-------PLG-----NSNNG 337
            RP  ++N   P RP G+ +  NG         N     R       P+      +S+NG
Sbjct: 105 -RPGSSTNRQAPMRPPGSGSTMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSSNG 164

Query: 338 NGPGRPMVARK--ASSAAVQKKPSLPGTKNSVPGVHK--------ALPPKRLEDKRNDMR 397
            GPGR     +   S +++++KPS+   K+S+    +        + P +R+ ++R   R
Sbjct: 165 VGPGRSATNARPLPSKSSLERKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKVSR 224

Query: 398 PPAKAKVAPSRPVSASRPQISKAPAQRQVSSRPAVNDQR--PKKRPARRYSDEEDDAEGD 457
             A  ++ P +    S+ Q+   PA ++  SR   +++R   KK+PAR        +E  
Sbjct: 225 DMATPRMIPKQSAPTSKHQMMSKPALKRPPSRDIDHERRLLKKKKPAR--------SEDQ 284

Query: 458 EAISLIRKMFGYNPAKFSR-DDDDSDMEANFDDIMMEEKRSAKIARKEDEEQLRLIQEEE 506
           EA  ++R++    P +FSR DDDD +MEA F+DI  EE+RSA+IAR+EDE +L+L++EEE
Sbjct: 285 EAFDMLRQLL--PPKRFSRYDDDDINMEAGFEDIQKEERRSARIAREEDERELKLLEEEE 340

The following BLAST results are available for this feature:
BLAST of Lsi01G008400 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi01G008400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B1631.3e-21381.34protein SPT2 homolog OS=Cucumis melo OX=3656 GN=LOC103484898 PE=3 SV=1[more]
A0A0A0KLN32.9e-20878.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497170 PE=3 SV=1[more]
A0A6J1GFI43.0e-19776.01protein SPT2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453709 PE=3 SV=1[more]
A0A6J1ILM28.1e-19573.57protein SPT2 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478135 PE=3... [more]
A0A6J1ISZ01.7e-19271.73protein SPT2 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478135 PE=3... [more]
BLAST of Lsi01G008400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881803.11.2e-22788.04protein SPT2 homolog isoform X1 [Benincasa hispida] >XP_038881804.1 protein SPT2... [more]
XP_038881805.14.5e-22487.45protein SPT2 homolog isoform X2 [Benincasa hispida][more]
XP_008440471.12.8e-21381.34PREDICTED: protein SPT2 homolog [Cucumis melo] >XP_008440472.1 PREDICTED: protei... [more]
XP_004143538.15.9e-20878.47protein SPT2 homolog [Cucumis sativus] >XP_011657928.1 protein SPT2 homolog [Cuc... [more]
KAE8647534.15.9e-20878.47hypothetical protein Csa_003728 [Cucumis sativus][more]
BLAST of Lsi01G008400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22720.26.7e-4033.90SPT2 chromatin protein [more]
AT2G22720.36.7e-4033.90SPT2 chromatin protein [more]
AT4G37860.15.9e-2028.40SPT2 chromatin protein [more]
AT2G22720.12.9e-1130.03SPT2 chromatin protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 471..498
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR22691YEAST SPT2-RELATEDcoord: 12..505
NoneNo IPR availablePANTHERPTHR22691:SF8PROTEIN SPT2 HOMOLOGcoord: 12..505
IPR013256Chromatin SPT2SMARTSM00784spt2coord: 400..502
e-value: 1.0E-24
score: 98.1
IPR013256Chromatin SPT2PFAMPF08243SPT2coord: 420..498
e-value: 3.4E-16
score: 59.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G008400.1Lsi01G008400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043486 histone exchange
biological_process GO:0006334 nucleosome assembly
biological_process GO:0010847 regulation of chromatin assembly
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005730 nucleolus
molecular_function GO:0003677 DNA binding
molecular_function GO:0042393 histone binding