Lsi01G008240 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G008240
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRhamnogalacturonan endolyase
Locationchr01: 6532837 .. 6539162 (-)
RNA-Seq ExpressionLsi01G008240
SyntenyLsi01G008240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCTCAACCTGTTTGAGACGAAAAAGCTCTCTCTTTTTGTCCCCCAATAAAAAAAATATCTGCTTGTTTTGCAAATATTCTATTTTTTTCCTTCATATATAGGTAACCTCATTATTATTGGTCTATTATTTAATCCATGCAAATTCATTCACAGCCTTTTTCTTCCTTATATATAGTAATTAACCCTTTGAGGAGAGATGGTTTAATTTGTGTATTAATGTTTTGAAGTTCATATGTTATTAGAACGTTATTATTGTTCTTTGAAACTGCTTCAACAAAAGGAATAAAAATGGAGAAGAAAGCCAAAAGAAAAAGACAACAGAAAAAGCTTGAGTTCCCAGCAATGGCTGCACTCCTTTTCTTATTCTTCAGTTTATCTCTCGCCATGGCCAATCCACAACAACAAGATTCCTCCCAACAGTTAGAATTTTTCTTTTTTTCTTCTTCTTCTTTCATGATATATTTTTTTTTATTGCGTCAAATCTTTTATTTTCCAAATACAATAAAAAGTTTTTTTGAAAATTTGCCCGGGGGTCTGTTTTGCACTGGGAAAATTTTGGTTAAAATCATGATTAAATAGACTGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTGCCCGATAAAGGGTTAATGGTTTGATTTTGATTTTATTTGTTTAAATGAATTGCAGAAGAATGGTAGAAAATTTGGTGGAGAACAACAACAAATCAATGTTGTCACGTGACGTAACGTTCGAATGGCAGAATCGTGGACGGGTGACAATCTAGTAACTTAATCCTTCTTTCTACGTTTCTATATTTTATACCCAAAAAAAAAAAACATGTTTTTTTTAGTTATTATTATTGTAAAAAATATTATTAAGATTTAATAAAAAAAATCAGATAAAAATCAATTTATTTGACAATAGTGACTAAAAACTCAAATAACCATTATGATTATATTTAAACTATTTTTTTTATAAAGTTTTTACATTTTGATTACGATATCAGACACAATAAAATAAAATAAAATCACGCACGCTACAAATTTTGAATCTTGGATTTTATTTTTAAGATGCTTTCAAAATCTTTTAACGCATATGGGTTTTATTTATTTATTTATTATTAACTAGGGAAAAAATTAATTTTTGGTATTAATATATTTTTCTTTTCAGGTGGTAATTGACAATGGGTTAGTTCGAGTCACTTTATCTCGTCCGGAAGGCAATGTTATTGGCCTAAAATACAAGGGTATTGATAACGTACTTGAAATTCACAACCCACAACATAACAGAGGGTAAATCTCTAAATTTTCCTCTTTTTTTCTTTTCTTTCTATATAATATATTGTAAAAAAAAAAATTAAAAAAAATAATAATAAGACCAACTTATTCATTTATTTACCTTAGTTATATAAAATTAATTTTATCTTCAAATGGGGTACATGAAAAGTGGAAAAAATAATTATTGTTGTTGACGTGTTATGTAGATATTGGGACGTGGTTTGGAACCACCCAAATAGAGCTAGTTCCACTGACAGGTAACTACTGAATATTTTTTTAAAAAATTTATATTAACTGAATTCTGTTCATATTAAAAATAATGTGTGATTTTTTATATTTAAACTAGTACTACGTAGTTTAATTGTGAAAAATAATAAGATAGACATATTGCATGCCAAAATGAACTCAAGTCTTGAATATAACAATACAAATTCAATTTTCTTTTAAATATTTATTATTATTTATTATTATTATTTGCCTTTGTGATGGAGTGAGTTCCAAGTATTATTCTTTCATGTAATTCTAATAAACCTATATATATATTTTTAATTTTGTGAATAAAAAAAGGTAATAAAAATATACTATATATAATCTAATGCATTTTTACAGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGGTGCTCCTTCCGTCCCTACATTTTTTTCATTATCCTTAATTGTAAAATAATAATTTTCTAATTATGTTTCGTGTTTCCATAATTTGATTTACATTTCAAAAATATTACTAAACTAAACAATCTTTTTTTCATAGTCAAATGTATAAATTTTAATTTTAAAGTTGGAAAAAATTGCAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAGTAAGTGTTTTCCAAGTTAGAATGTTTTTTTTTTTAAAAAAAAAAATTGAGTTATAAAAAAATTTATGTTATACTTTTTCCTATATAATCAATGGCCAGATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGGTCTCTAGCTTATCCAGAGGCGGTTCTCTTAACCCGACCCACCAATTCTAACCTCAAAGGAGAGGTATGTATATAAATATAAACTTAAAGTTTTGGATCTTTATTATTTGGTACCTTCATTAAAAAAATGTTATACTTTACCCAAAATTTTGAATTTAATTTTTATTTGGTTCATAAGTTTTAAAATATTAAATTTTTACAAACTTTTGTGTCTTAATTTAGTCACTAACATTTTTGAATTTACACTTTTAACCTTTCACTAAATACTTCAAATCATTCATATTGTCTATCAATTACTAATTTTAACAAATTATTATTAAAATAGTTTTTACCNTGTTGACGTGTTATGTAGATATTGGGACGTGGTTTGGAACCACCCAAATAGAGCTAGTTCCACTGACAGGTAACTACTGAATATTTTTTTAAAAAATTTATATTAACTGAATTCTGTTCATATTAAAAATAATGTGTGATTTTTTATATTTAAACTAGTACTACGTAGTTTAATTGTGAAAAATAATAAGATAGACATATTGCATGCCAAAATGAACTCAAGTCTTGAATATAACAATACAAATTCAATTTTCTTTTAAATATTTATTATTATTTATTATTATTATTTGCCTTTGTGATGGAGTGAGTTCCAAGTATTATTCTTTCATGTAATTCTAATAAACCTATATATATATTTTTAATTTTGTGAATAAAAAAAGGTAATAAAAATATACTATATATAATCTAATGCATTTTTACAGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGGTGCTCCTTCCGTCCCTACATTTTTTTCATTATCCTTAATTGTAAAATAATAATTTTCTAATTATGTTTCGTGTTTCCATAATTTGATTTACATTTCAAAAATATTACTAAACTAAACAATCTTTTTTTCATAGTCAAATGTATAAATTTTAATTTTAAAGTTGGAAAAAATTGCAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAGTAAGTGTTTTCCAAGTTAGAATGTTTTTTTTTTTAAAAAAAAAAATTGAGTTATAAAAAAATTTATGTTATACTTTTTCCTATATAATCAATGGCCAGATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGGTCTCTAGCTTATCCAGAGGCGGTTCTCTTAACCCGACCCACCAATTCTAACCTCAAAGGAGAGGTATGTATATAAATATAAACTTAAAGTTTTGGATCTTTATTATTTGGTACCTTCATTAAAAAAATGTTATACTTTACCCAAAATTTTGAATTTAATTTTTATTTGGTTCATAAGTTTTAAAATATTAAATTTTTACAAACTTTTGTGTCTTAATTTAGTCACTAACATTTTTGAATTTACACTTTTAACCTTTCACTAAATACTTCAAATCATTCATATTGTCTATCAATTACTAATTTTAACAAATTATTATTAAAATAGTTTTTACCAATTTTTCACCGCTATTTAAAAATAATTAAAAGTAACATAAGTAAATATTGAATGTTAGAGGCGAAATGAATGTAACACTTTGAAGAAAAAAAAACAAAATCCGAGGATCAAAAGATTTTTTTTTTTTTAAATGTGTTTCTAAATTGGGGTGTGATTGTGTGTGGTGCAGGTGGACGATAAGTACCAATACTCCTTAGAAAATATGGAAAACAAGGTTCATGGATGGGAGTCAAGTGATCCACACGTGGGATTCTGGATGATTACGCCCAGTGATGAGTTTCGCACGGCCGGGCCCCACAAGCAAGATCTCACTTCCCACGTCGGCCCCACCACTCTCTCTGTAAGCCCAACATCCCTTTTTCGTAATATTGTTTTTTTCAATTTTATTTTTATTTTTATCTAAATCATAATTTTCTATTTAAAAAAAGATGTTCGTGAGTACGCATTATGCTGGCAAAGAAGTTTCCATGAGATTCGGAGAGGGAGAGGCTTGGAAGAAGGTTTTCGGACCGGTTTTCACTTATCTAAACTCGGATCCGACCGGCACTGAAAATCTCGGTTCACTATGGGAAGATGCTAAAAACCAGGTATTTTATTTATGATTATCCCTTTATTTAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAACAGCCATTTGGAGCTATTTATATTTGTAAAAAGGGAAATTGAAAAATGGAAATATTTTAAAATCAGATGAGGATAGAAACGAGTAAGTGGCCATACAACTTTGTTGAATCCGAAGACTTTCCATCGTCAGACCAAAGAGGAACCGTGACAGGTCGATTACTAGTCCGAGATAGGTTTGTTCCGTTGCTTTCATTTGTCTTCCATGTCTTGTCTTTGTCACGTCCTCAAAGCTACGTCGTTTTCTTCTTTGGCAGATACGCTGAAGAGTCACAGATGTGGGCCGATTCGGCTTATGTGGGCCTCGCTGCTCCCGGGGAATTGGGGTCTTGGCAAAGGCAAAGCAAGGTCAACTTTTTCCATTATCATACAACTCTTATACCAAAAATACTTTGCATACAATCTCGAGCTAACCATTATCCTCATTTTCATTTATAGGGATACCAGTTCTGGACACGCGCAGACGAGCAAGGATACTTCTCAATCAACAACATTAGGCCAGGAAACTACAATCTCTATGCTTGGGTACCAGGTGTCATCGGCGATTACAAGTACGACAATGAAATCACCGTCACACCAGGGAGTTCCACCGGCCTAAACTTGTTGGTCTACGACCCTCCAAGACGAGGCCCAACTTTATGGGAGATCGGCTTCCCAGATCGGACGGCAGCTGAGTTCTATATACCTAATCCCCAACCCACCCTCATGAACCGCTTATACAACAATTCCAAATTCCACACCCAAGATAATTTCCGACAATATGGTCTCTGGGATCGCTACTCTGAATTGTATCCCCATCAAGATCTCATCTACAACGTCGCCACCGATGATTACCGTCGTCATTGGTTCTTCGCTCACGTCACAAGAGCCACTAGTTCCGATACCTACGAGGCAACCACGTGGCAAATTGTGTTTCGTCTTCAAGGGCCTAAACAGATCGGTAGCTATATGCTCCGACTGGCCTTGGCCTCCTCAACCGAGGCGGTGGTGGATATCCGGTTCAACAATCCGTCTGCGAGACGGGTTCATTTCACGACCGGGTATTGGTCCTCGGGGAAAGATAATGCCATTGCCAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGAATATTTGGTAGAAGATGAAAATGTAATCTATCTTACACAGAGAAGACATACAGGGCCTTTTCAAGGAGTAATGTACGACTACATACGGTTTGAAGGTGTAGAGTAAAACCAATTACAAATAGAGCCAATTTATTCATTTAAATTCATTATTTTGTTTTTTTGTTAGGTAGGATTCTTGTAATTTGAGATAGTTTTTCTTAAGTTAAGCCAATTTCTCTGTTTTACTCTGTTGTTTCAAATATCCAAAATTTACTAGTAATGAAGCATACAATTTCATATTTTACCATCACATGATTCAATAGAGAGAGAACAAAAAATGAACATCAGCTAATGCTCTCTCTAATACAATATCAGAAAGTTGACAAATGCTCAATCAAAG

mRNA sequence

GTCCTCAACCTGTTTGAGACGAAAAAGCTCTCTCTTTTTGTCCCCCAATAAAAAAAATATCTGCTTGTTTTGCAAATATTCTATTTTTTTCCTTCATATATAGAACGTTATTATTGTTCTTTGAAACTGCTTCAACAAAAGGAATAAAAATGGAGAAGAAAGCCAAAAGAAAAAGACAACAGAAAAAGCTTGAGTTCCCAGCAATGGCTGCACTCCTTTTCTTATTCTTCAGTTTATCTCTCGCCATGGCCAATCCACAACAACAAGATTCCTCCCAACAAAGAATGGTAGAAAATTTGGTGGAGAACAACAACAAATCAATGTTGTCACGTGACGTAACGTTCGAATGGCAGAATCGTGGACGGGTGGTAATTGACAATGGGTTAGTTCGAGTCACTTTATCTCGTCCGGAAGGCAATGTTATTGGCCTAAAATACAAGGGTATTGATAACGTACTTGAAATTCACAACCCACAACATAACAGAGGATATTGGGACGTGGTTTGGAACCACCCAAATAGAGCTAGTTCCACTGACAGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGGTCTCTAGCTTATCCAGAGGCGGTGGACGATAAGTACCAATACTCCTTAGAAAATATGGAAAACAAGGTTCATGGATGGGAGTCAAGTGATCCACACGTGGGATTCTGGATGATTACGCCCAGTGATGAGTTTCGCACGGCCGGGCCCCACAAGCAAGATCTCACTTCCCACGTCGGCCCCACCACTCTCTCTATGTTCGTGAGTACGCATTATGCTGGCAAAGAAGTTTCCATGAGATTCGGAGAGGGAGAGGCTTGGAAGAAGGTTTTCGGACCGGTTTTCACTTATCTAAACTCGGATCCGACCGGCACTGAAAATCTCGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAAACGAGTAAGTGGCCATACAACTTTGTTGAATCCGAAGACTTTCCATCGTCAGACCAAAGAGGAACCGTGACAGGTCGATTACTAGTCCGAGATAGGTTTGTTCCGTTGCTTTCATTTGTCTTCCATGTCTTGTCTTTGTCACGTCCTCAAAGCTACGTCGTTTTCTTCTTTGGCAGATACGCTGAAGAGTCACAGATGTGGGCCGATTCGGCTTATGTGGGCCTCGCTGCTCCCGGGGAATTGGGGTCTTGGCAAAGGCAAAGCAAGGGATACCAGTTCTGGACACGCGCAGACGAGCAAGGATACTTCTCAATCAACAACATTAGGCCAGGAAACTACAATCTCTATGCTTGGGTACCAGGTGTCATCGGCGATTACAAGTACGACAATGAAATCACCGTCACACCAGGGAGTTCCACCGGCCTAAACTTGTTGGTCTACGACCCTCCAAGACGAGGCCCAACTTTATGGGAGATCGGCTTCCCAGATCGGACGGCAGCTGAGTTCTATATACCTAATCCCCAACCCACCCTCATGAACCGCTTATACAACAATTCCAAATTCCACACCCAAGATAATTTCCGACAATATGGTCTCTGGGATCGCTACTCTGAATTGTATCCCCATCAAGATCTCATCTACAACGTCGCCACCGATGATTACCGTCGTCATTGGTTCTTCGCTCACGTCACAAGAGCCACTAGTTCCGATACCTACGAGGCAACCACGTGGCAAATTGTGTTTCGTCTTCAAGGGCCTAAACAGATCGGTAGCTATATGCTCCGACTGGCCTTGGCCTCCTCAACCGAGGCGGTGGTGGATATCCGGTTCAACAATCCGTCTGCGAGACGGGTTCATTTCACGACCGGGTATTGGTCCTCGGGGAAAGATAATGCCATTGCCAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGAATATTTGGTAGAAGATGAAAATGTAATCTATCTTACACAGAGAAGACATACAGGGCCTTTTCAAGGAGTAATGTACGACTACATACGGTTTGAAGGTGTAGAGTAAAACCAATTACAAATAGAGCCAATTTATTCATTTAAATTCATTATTTTGTTTTTTTGTTAGGTAGGATTCTTGTAATTTGAGATAGTTTTTCTTAAGTTAAGCCAATTTCTCTGTTTTACTCTGTTGTTTCAAATATCCAAAATTTACTAGTAATGAAGCATACAATTTCATATTTTACCATCACATGATTCAATAGAGAGAGAACAAAAAATGAACATCAGCTAATGCTCTCTCTAATACAATATCAGAAAGTTGACAAATGCTCAATCAAAG

Coding sequence (CDS)

ATGGAGAAGAAAGCCAAAAGAAAAAGACAACAGAAAAAGCTTGAGTTCCCAGCAATGGCTGCACTCCTTTTCTTATTCTTCAGTTTATCTCTCGCCATGGCCAATCCACAACAACAAGATTCCTCCCAACAAAGAATGGTAGAAAATTTGGTGGAGAACAACAACAAATCAATGTTGTCACGTGACGTAACGTTCGAATGGCAGAATCGTGGACGGGTGGTAATTGACAATGGGTTAGTTCGAGTCACTTTATCTCGTCCGGAAGGCAATGTTATTGGCCTAAAATACAAGGGTATTGATAACGTACTTGAAATTCACAACCCACAACATAACAGAGGATATTGGGACGTGGTTTGGAACCACCCAAATAGAGCTAGTTCCACTGACAGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGAGTAAGGGCGACAGAATTCAAAGTGGTTACGGCCAACAGCGACCAAATAGAGCTTTCATTCACCAAAACTTGGGATCCTTCTGACTCTTCTTCACTTCCTTTGAACATAGACAAAAGATATATTCTGCGACGCGGTGACTCTGGATTCTATTCCTATGGTATATTTGAACGACTTGATGGATGGCCTCAAATTGCCGTTGATCAGATTAGGATCGCCTACAAACTCCAAGGGGACAAATTTCATTACATGGCGGTATCGGACGACAGACAGAGGATCATGCCAACGTTACATGACCGTCTGACCGGACGGTCTCTAGCTTATCCAGAGGCGGTGGACGATAAGTACCAATACTCCTTAGAAAATATGGAAAACAAGGTTCATGGATGGGAGTCAAGTGATCCACACGTGGGATTCTGGATGATTACGCCCAGTGATGAGTTTCGCACGGCCGGGCCCCACAAGCAAGATCTCACTTCCCACGTCGGCCCCACCACTCTCTCTATGTTCGTGAGTACGCATTATGCTGGCAAAGAAGTTTCCATGAGATTCGGAGAGGGAGAGGCTTGGAAGAAGGTTTTCGGACCGGTTTTCACTTATCTAAACTCGGATCCGACCGGCACTGAAAATCTCGGTTCACTATGGGAAGATGCTAAAAACCAGATGAGGATAGAAACGAGTAAGTGGCCATACAACTTTGTTGAATCCGAAGACTTTCCATCGTCAGACCAAAGAGGAACCGTGACAGGTCGATTACTAGTCCGAGATAGGTTTGTTCCGTTGCTTTCATTTGTCTTCCATGTCTTGTCTTTGTCACGTCCTCAAAGCTACGTCGTTTTCTTCTTTGGCAGATACGCTGAAGAGTCACAGATGTGGGCCGATTCGGCTTATGTGGGCCTCGCTGCTCCCGGGGAATTGGGGTCTTGGCAAAGGCAAAGCAAGGGATACCAGTTCTGGACACGCGCAGACGAGCAAGGATACTTCTCAATCAACAACATTAGGCCAGGAAACTACAATCTCTATGCTTGGGTACCAGGTGTCATCGGCGATTACAAGTACGACAATGAAATCACCGTCACACCAGGGAGTTCCACCGGCCTAAACTTGTTGGTCTACGACCCTCCAAGACGAGGCCCAACTTTATGGGAGATCGGCTTCCCAGATCGGACGGCAGCTGAGTTCTATATACCTAATCCCCAACCCACCCTCATGAACCGCTTATACAACAATTCCAAATTCCACACCCAAGATAATTTCCGACAATATGGTCTCTGGGATCGCTACTCTGAATTGTATCCCCATCAAGATCTCATCTACAACGTCGCCACCGATGATTACCGTCGTCATTGGTTCTTCGCTCACGTCACAAGAGCCACTAGTTCCGATACCTACGAGGCAACCACGTGGCAAATTGTGTTTCGTCTTCAAGGGCCTAAACAGATCGGTAGCTATATGCTCCGACTGGCCTTGGCCTCCTCAACCGAGGCGGTGGTGGATATCCGGTTCAACAATCCGTCTGCGAGACGGGTTCATTTCACGACCGGGTATTGGTCCTCGGGGAAAGATAATGCCATTGCCAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGAATATTTGGTAGAAGATGAAAATGTAATCTATCTTACACAGAGAAGACATACAGGGCCTTTTCAAGGAGTAATGTACGACTACATACGGTTTGAAGGTGTAGAGTAA

Protein sequence

MEKKAKRKRQQKKLEFPAMAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNKSMLSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE
Homology
[Close]
BLAST of Lsi01G008240 vs. ExPASy Swiss-Prot
Match: Q8RJP2 (Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.7e-23
Identity = 113/494 (22.87%), Postives = 187/494 (37.85%), Query Frame = 0 

Query: 240 KVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAV 299
           +V+    DQ+ L++       D  +  L ++   I+ R  SG YSY +       P + V
Sbjct: 100 EVIKQTPDQVHLAYI------DDQNGKLRLEYHLIMTRDVSGLYSYVVAANTGSAP-VTV 159

Query: 300 DQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPE-------AVDDKYQYSL 359
            ++R  Y+    +     + +  +R  P L+D L        E       +V  KY ++ 
Sbjct: 160 SELRNVYRFDATRLD--TLFNSIRRGTPLLYDELEQLPKVQDETWRLPDGSVYSKYDFAG 219

Query: 360 ENMENKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEV 419
              E++   W       G WM+  S E+ +    KQ+L  H     L+    +H+   ++
Sbjct: 220 YQRESRY--WGVMGNGYGAWMVPASGEYYSGDALKQELLVHQDAIILNYLTGSHFGTPDM 279

Query: 420 SMRFGEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFP 479
             + G    ++K++GP   Y+N       N   L  D   +   E + WPY +++   +P
Sbjct: 280 VAQPG----FEKLYGPWLLYINQG-----NDRELVADVSRRAEHERASWPYRWLDDARYP 339

Query: 480 SSDQRGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGL 539
              QR TV+GRL                                        A  A V L
Sbjct: 340 R--QRATVSGRLRTE-------------------------------------APHATVVL 399

Query: 540 AAPGELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVT 599
            +  E  ++  Q+ GY F  R +  G FS++N+ PG Y L A+  G         +    
Sbjct: 400 NSSAE--NFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGLLAQQTVRV 459

Query: 600 PGSSTGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFR 659
            G  T L  +  D  +  P  W IG  DR A E                   F   D  R
Sbjct: 460 EGKKTRLGQI--DARQPAPLAWAIGQADRRADE-------------------FRFGDKPR 495

Query: 660 QYGLWDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQ 719
           QY    R+    P  DL + +     R+ W++A           +  +W I+F  + P+Q
Sbjct: 520 QY----RWQTEVP-ADLTFEIGKSRERKDWYYAQT---------QPGSWHILFNTRTPEQ 495

Query: 720 IGSYMLRLALASST 727
              Y L +A+A+++
Sbjct: 580 --PYTLNIAIAAAS 495

[Close]
BLAST of Lsi01G008240 vs. ExPASy Swiss-Prot
Match: A5ABH4 (Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rglB PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-17
Identity = 68/290 (23.45%), Postives = 122/290 (42.07%), Query Frame = 0 

Query: 347 KYQYSLENMENKVHGW-----ESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSM 406
           KY +S    +N VHG       S+    G W++  + +    GP   DLT  V     + 
Sbjct: 216 KYTFSNAWRDNSVHGMYADGSTSNGSTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 275

Query: 407 FVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKW 466
            VS H+     ++ +G    + + FGP + + N     T +L  L  DA+    +    W
Sbjct: 276 LVSNHHGEGTPNITYG----FDRTFGPQYYHFNGGKGSTASLQELKSDAET---LADPSW 335

Query: 467 PYNFVES-----EDFPSSDQRGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGR 526
             +F +S       +  S QRG+V G++ +                 +RP + V+   G+
Sbjct: 336 NVDFYDSIAKHVVGYTPSSQRGSVQGKIKLPK-------------GATRPIA-VLTVDGQ 395

Query: 527 YAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWV 586
           Y +++ +                     S  YQ+W   D+ G+FS+++++ G Y L  + 
Sbjct: 396 YFQDNSV--------------------NSSSYQYWAEIDDSGHFSVDHVKEGPYRLTVYA 455

Query: 587 PGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGPTLWEIGFPDRTAAEF 627
            G+ GD+  D  + V  G  T +    ++    G  +W +G PD+++ EF
Sbjct: 456 DGIFGDFVRDG-VQVKAGKKTTIQ-ETWEAESAGTEIWRLGTPDKSSGEF 460

[Close]
BLAST of Lsi01G008240 vs. ExPASy Swiss-Prot
Match: Q5AZ85 (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglB PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 5.1e-15
Identity = 124/598 (20.74%), Postives = 224/598 (37.46%), Query Frame = 0 

Query: 273 YILRRGDSGFYSYGIFERLDGWPQIA-----VDQIRIAYKLQGDKFHYMAVSDDRQRIMP 332
           + LR G++GF+   +F RL  + +       + ++R  ++   D + ++  SD +   +P
Sbjct: 123 WFLRDGETGFH---MFSRLAYYNETTPFLRNLQELRTLFRPNTDLWTHLTSSDLQTAPLP 182

Query: 333 TLHDRLTGRSLAYPEAV-------DD-----------KYQYSLENMENKVHGW-----ES 392
           +  D      +   +A        DD           KY +S    +N VHG       S
Sbjct: 183 S--DEAIAEQIVVQDATWRLNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTS 242

Query: 393 SDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKK 452
                G W++  + +    GP   DLT  V     +  VS H+     ++  G    + +
Sbjct: 243 DGTTYGAWLVMNTKDTYYGGPLHSDLT--VDGIIYNYIVSNHHGEGTPNITNG----FDR 302

Query: 453 VFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVES-----EDFPSSDQRGT 512
            FGP F   N    G+ +L  L ++A++   + +  W  +F +S       +  S QRG+
Sbjct: 303 TFGPQFYLFNGG--GSSSLEELRDEARS---LASPSWNADFYDSIAKHVIGYVPSSQRGS 362

Query: 513 VTGRL-LVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGEL 572
           V G + L ++   P+                V+   G Y +++           A P   
Sbjct: 363 VKGTIKLPKNAKSPIA---------------VLTVDGHYFQDNS----------AVP--- 422

Query: 573 GSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTG 632
                    +Q+W   D+ G FSI+ +  G Y L  +  G+ GD+  D  I V    ST 
Sbjct: 423 -------SSHQYWADIDKNGRFSIDRVVAGKYRLTVYADGIFGDFTRDG-IVVKARKSTS 482

Query: 633 LNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWD 692
           +    + P   G  +W +G PD+++ EF     +     R       H  +    +G +D
Sbjct: 483 IK-ETWKPESAGTEIWRLGTPDKSSGEFRHGAARDPTHPR-------HPPEYLIYWGAYD 542

Query: 693 RYSELYPHQDLIY---NVATDDYRRHW-FFAHVTRATSSDTYEATTWQIVFRLQG----P 752
             S+     D +    + ATD    HW  F        +++     W+I F L       
Sbjct: 543 WQSDFPGGIDYMIGESDPATDFNTVHWAVFGPTPDNPVAESNTTHDWRIRFDLSAKQLHA 602

Query: 753 KQIGSYMLRLALASSTEAVVDI-------------RFNNPSARRVHFTTGYWSSGKDNAI 808
           ++  +  ++LA A +     D+              + N     +    GY  S   + I
Sbjct: 603 RKTATLTIQLAGAKAASGNTDVYNASEPYANLPLRSYINEQEEPLTMVIGYDQS--SSCI 658

[Close]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match: A0A1S3B1X3 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 573/814 (70.39%), Postives = 623/814 (76.54%), Query Frame = 0 

Query: 3   KKAK-RKRQQKKL-EFPAMAALLFLFFSLSLAMA--NPQQQDSSQQRMVENLVENNNKSM 62
           K AK R  Q KKL  F  MAALLFLFF L+LAMA   PQQQD SQQ     LVENNNK+M
Sbjct: 4   KNAKIRTTQHKKLRRFSTMAALLFLFFGLALAMAVPVPQQQDFSQQ----ILVENNNKTM 63

Query: 63  LSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVV 122
           LSRDVT E QN G+V+IDNG+VRVT SRP+GNVI LKYKG+DN+LEIHN  +NRGYWDVV
Sbjct: 64  LSRDVTLELQNHGQVIIDNGIVRVTFSRPDGNVIALKYKGVDNLLEIHNVHYNRGYWDVV 123

Query: 123 WNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSG 182
           WN PN+AS+TDRVRAT FKV+TAN DQ+ELSFTKTWDPSD+SSLPLNIDKRYI+RRGDSG
Sbjct: 124 WNRPNKASATDRVRATNFKVITANDDQVELSFTKTWDPSDASSLPLNIDKRYIVRRGDSG 183

Query: 183 FYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATE 242
           FYSYGIFERL+GWPQI VDQIRIAYKL GDKFHYMAVSDDRQR+MPT  DRL G+     
Sbjct: 184 FYSYGIFERLNGWPQIDVDQIRIAYKLLGDKFHYMAVSDDRQRMMPTAEDRLAGK----- 243

Query: 243 FKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRR-GDSGFYSYGIFERLDGWPQI 302
                                      PL+  +  +L R  D  F               
Sbjct: 244 ---------------------------PLDYPEAVLLTRPADPSF--------------- 303

Query: 303 AVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMEN 362
                      QG+                                VDDKYQYSLENMEN
Sbjct: 304 -----------QGE--------------------------------VDDKYQYSLENMEN 363

Query: 363 KVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFG 422
           +VHGWESSDPHVGFWMITPSDEFRTAGP KQDLTSHVGP TLSMFVSTHYAGK+VSMRF 
Sbjct: 364 RVHGWESSDPHVGFWMITPSDEFRTAGPVKQDLTSHVGPITLSMFVSTHYAGKDVSMRFR 423

Query: 423 EGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQR 482
           EGEAWKKVFGPVFTYLNSDPTGT+N GSLWEDAKNQM IETS+WPYNFVES +FPSSDQR
Sbjct: 424 EGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPSSDQR 483

Query: 483 GTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGE 542
           G++ G+LLVRD                           RYA+  QMWADSAYVGLAAPGE
Sbjct: 484 GSLRGQLLVRD---------------------------RYAKYPQMWADSAYVGLAAPGE 543

Query: 543 LGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSST 602
           LGSWQR+SKGYQFWTRADE GYFSI+NIR G YNLYAWVPGV+GDYKYD EIT+TP SST
Sbjct: 544 LGSWQRESKGYQFWTRADEHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSST 603

Query: 603 GLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHT-QDNFRQYGL 662
            LNLLV+DPPR+GPTLWEIG PDR AAEFYIP+P+PTLMNR YN+SK H   DNFRQYGL
Sbjct: 604 NLNLLVFDPPRQGPTLWEIGIPDRKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGL 663

Query: 663 WDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSY 722
           W+RY+ELYPHQDL+YNV TDDYRR+WFFAHVTRAT+S  YEATTWQIVFRLQ PK+IG+Y
Sbjct: 664 WERYAELYPHQDLVYNVDTDDYRRNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNY 696

Query: 723 MLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSE 782
           MLRLALASSTEAV+DIRFNNPS +R HFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPS+
Sbjct: 724 MLRLALASSTEAVIDIRFNNPSTKRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQ 696

Query: 783 YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           YLVE ENVIYLTQRRHTG FQGVMYDYIRFE VE
Sbjct: 784 YLVEGENVIYLTQRRHTGAFQGVMYDYIRFEDVE 696

[Close]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match: A0A0A0KIQ2 (Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_6G497340 PE=3 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 541/793 (68.22%), Postives = 600/793 (75.66%), Query Frame = 0 

Query: 19  MAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNKSMLSRDVTFEWQNRGRVVIDNG 78
           MAALLF FF L+LAMA P QQDSSQQ     L ENNNK+MLSRDVT E QN G+V+IDNG
Sbjct: 1   MAALLFFFFGLALAMAVPPQQDSSQQ----ILEENNNKAMLSRDVTLELQNHGQVIIDNG 60

Query: 79  LVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVRATEFKV 138
           +VRVTLSRP+G+VI LKY GIDN+LEI N Q NRGYWDVVWN PN+AS+TDRV AT FKV
Sbjct: 61  IVRVTLSRPDGDVIALKYNGIDNLLEIRNVQSNRGYWDVVWNRPNKASATDRVIATNFKV 120

Query: 139 VTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQ 198
           +T+NSDQ+ELSF KTWDPSD SSLP NIDKRYILRRGDSGFYSYGIFERL+GWPQI VDQ
Sbjct: 121 ITSNSDQVELSFAKTWDPSDPSSLPSNIDKRYILRRGDSGFYSYGIFERLNGWPQIEVDQ 180

Query: 199 IRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELSFTKTWD 258
           IRIAYKL GDKFHYMA+SD+RQR+MPT  DRLTG+                         
Sbjct: 181 IRIAYKLLGDKFHYMAISDNRQRMMPTAEDRLTGK------------------------- 240

Query: 259 PSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAV 318
                  PL+  +  +L R                                         
Sbjct: 241 -------PLDYPEAVLLTR----------------------------------------- 300

Query: 319 SDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSD 378
                            R  ++   VDDKYQYSLENMENKVHGWESSDPHVGFWMITPSD
Sbjct: 301 ----------------PRDPSFRGEVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSD 360

Query: 379 EFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPT 438
           EFRTAGP KQDLTSHVGP TLSMFVSTHYAGK+VSMRF EGEAWKKVFGPVFTY+NSDPT
Sbjct: 361 EFRTAGPVKQDLTSHVGPVTLSMFVSTHYAGKDVSMRFQEGEAWKKVFGPVFTYINSDPT 420

Query: 439 GTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFVPLLSFVF 498
           GT   GSLW+DAKNQMRIETSKWPYNFVES +FPSS+QRG+++G+LLVRD F        
Sbjct: 421 GTGKPGSLWDDAKNQMRIETSKWPYNFVESTEFPSSEQRGSLSGQLLVRDGF-------- 480

Query: 499 HVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFWTRADEQG 558
                              A+  QMW DSAYVGLAAPGELGSWQR+SKGYQFWTRAD+ G
Sbjct: 481 -------------------AKYPQMWGDSAYVGLAAPGELGSWQRESKGYQFWTRADDHG 540

Query: 559 YFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGPTLWEIGF 618
           YFSI+NIR G YNLYAWVPGV+GDYKYDN+IT+TP SST LNLLV+ PPR+GPTLWEIG 
Sbjct: 541 YFSIDNIRSGTYNLYAWVPGVLGDYKYDNQITITPRSSTNLNLLVFHPPRQGPTLWEIGI 600

Query: 619 PDRTAAEFYIPNPQPTLMNRLYNNSKFHTQ-DNFRQYGLWDRYSELYPHQDLIYNVATDD 678
           PDR AAEFYIP+P+PTL N  YN+SK H Q DNFRQYGLW+RY+ELYPH DL+YNV TDD
Sbjct: 601 PDRKAAEFYIPSPRPTLTNCFYNDSKLHIQDDNFRQYGLWERYAELYPHGDLVYNVDTDD 660

Query: 679 YRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVVDIRFNNP 738
           Y R+WF+AHVTRAT S TYEATTWQIVF +Q PKQIG+YMLRLALASST+AV+DIRFNNP
Sbjct: 661 YHRNWFYAHVTRATGSGTYEATTWQIVFHIQRPKQIGNYMLRLALASSTDAVIDIRFNNP 673

Query: 739 SARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQRRHTGPFQ 798
           S ++ HFTTGYWSSGKDNAIARHGIHGL+WLFNF+VPS+ LVE +NVIYLTQRRHTG FQ
Sbjct: 721 STKQPHFTTGYWSSGKDNAIARHGIHGLHWLFNFQVPSQLLVEGQNVIYLTQRRHTGEFQ 673

Query: 799 GVMYDYIRFEGVE 811
           GVMYDYIRFE VE
Sbjct: 781 GVMYDYIRFEDVE 673

[Close]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match: A0A6J1IPB6 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 552/814 (67.81%), Postives = 608/814 (74.69%), Query Frame = 0 

Query: 1   MEKKAKRKRQQK----KLEFPAMAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNK 60
           MEKK K +RQ+     KL F AM  LLFLFFSL+LA  N     SSQ+RMV  LV+ NN+
Sbjct: 40  MEKKGKARRQRPYWTWKLGFSAM-PLLFLFFSLTLAHKN-----SSQRRMVRKLVK-NNE 99

Query: 61  SMLSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWD 120
           SMLSRDVT EW+NRG+VV+DNGLVR+TLS PEGNV+ LKY  IDN+LEI NPQ+NRGYWD
Sbjct: 100 SMLSRDVTVEWENRGQVVMDNGLVRITLSSPEGNVVALKYNAIDNLLEIRNPQYNRGYWD 159

Query: 121 VVWNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGD 180
           VVWN PNR S+TDRVRAT+FKV+TA +DQIELSFTKTW+P+  SS PLNIDKRYILRRGD
Sbjct: 160 VVWNRPNRGSATDRVRATDFKVITATTDQIELSFTKTWNPNSHSSCPLNIDKRYILRRGD 219

Query: 181 SGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRA 240
           SGFY+Y IFERLDGWPQI VDQIR+ +K+ G KFHYM VSDDRQRIMPT  DR TG   A
Sbjct: 220 SGFYAYAIFERLDGWPQIDVDQIRMVFKILGKKFHYMVVSDDRQRIMPTARDRETGHPLA 279

Query: 241 TEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQ 300
               V+                       P+N +                          
Sbjct: 280 YREAVLLTQ--------------------PINSN-------------------------- 339

Query: 301 IAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENME 360
                      L+G+                                VDDKYQYSLENME
Sbjct: 340 -----------LKGE--------------------------------VDDKYQYSLENME 399

Query: 361 NKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 420
           NKVHGWES +PHVGFWMITPSDEFRTAGP KQDLTSHVGPTTLSMFVSTHYAGKEVSMRF
Sbjct: 400 NKVHGWESMNPHVGFWMITPSDEFRTAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 459

Query: 421 GEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQ 480
           GEGEAWKKVFGPVF YLNS P GT   G LWEDAKNQMRIETS+WPY+FV S DFPSS+Q
Sbjct: 460 GEGEAWKKVFGPVFIYLNSGPVGT-GPGLLWEDAKNQMRIETSRWPYSFVGSTDFPSSNQ 519

Query: 481 RGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPG 540
           RGTV+GRLLVRD                           R+A++  MW DSAYVGLAAPG
Sbjct: 520 RGTVSGRLLVRD---------------------------RHAKKWLMWGDSAYVGLAAPG 579

Query: 541 ELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSS 600
           ELGSWQ +SKGYQFWTRAD QGYFSINNIRPGNYNLYAW+PGVIGDYKY N+ITVT GS+
Sbjct: 580 ELGSWQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWIPGVIGDYKYANDITVTLGST 639

Query: 601 TGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGL 660
           T L LL+YDPPR+GPTLWEIG PDRTAAEFYIP+P PTLMNR YNNS  HT D FRQYGL
Sbjct: 640 TRLGLLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPHPTLMNRFYNNSDIHTPDKFRQYGL 699

Query: 661 WDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSY 720
           W+RY+EL+P QDL+YNVATDDYRRHWFFAHVTRAT   TY+ATTWQIVFRLQGPKQ G+Y
Sbjct: 700 WERYAELFPRQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNY 729

Query: 721 MLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSE 780
           MLRLALAS+TEAVV+IRFNNP ARR HF TGYW+SG+DNAIARHGIHGLYWLFNF+VPS 
Sbjct: 760 MLRLALASTTEAVVEIRFNNPLARRAHFLTGYWASGRDNAIARHGIHGLYWLFNFQVPSG 729

Query: 781 YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           YLVEDEN+IYLTQRRH GPFQGVMYDYIRFEGV+
Sbjct: 820 YLVEDENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 729

[Close]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match: A0A1S3B219 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 1068.1 bits (2761), Expect = 1.7e-308
Identity = 524/740 (70.81%), Postives = 571/740 (77.16%), Query Frame = 0 

Query: 73  VVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVR 132
           V+IDNG+VRVT SRP+GNVI LKYKG+DN+LEIHN  +NRGYWDVVWN PN+AS+TDRVR
Sbjct: 2   VIIDNGIVRVTFSRPDGNVIALKYKGVDNLLEIHNVHYNRGYWDVVWNRPNKASATDRVR 61

Query: 133 ATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWP 192
           AT FKV+TAN DQ+ELSFTKTWDPSD+SSLPLNIDKRYI+RRGDSGFYSYGIFERL+GWP
Sbjct: 62  ATNFKVITANDDQVELSFTKTWDPSDASSLPLNIDKRYIVRRGDSGFYSYGIFERLNGWP 121

Query: 193 QIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELS 252
           QI VDQIRIAYKL GDKFHYMAVSDDRQR+MPT  DRL G+                   
Sbjct: 122 QIDVDQIRIAYKLLGDKFHYMAVSDDRQRMMPTAEDRLAGK------------------- 181

Query: 253 FTKTWDPSDSSSLPLNIDKRYILRR-GDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGD 312
                        PL+  +  +L R  D  F                          QG+
Sbjct: 182 -------------PLDYPEAVLLTRPADPSF--------------------------QGE 241

Query: 313 KFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPHVGF 372
                                           VDDKYQYSLENMEN+VHGWESSDPHVGF
Sbjct: 242 --------------------------------VDDKYQYSLENMENRVHGWESSDPHVGF 301

Query: 373 WMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFT 432
           WMITPSDEFRTAGP KQDLTSHVGP TLSMFVSTHYAGK+VSMRF EGEAWKKVFGPVFT
Sbjct: 302 WMITPSDEFRTAGPVKQDLTSHVGPITLSMFVSTHYAGKDVSMRFREGEAWKKVFGPVFT 361

Query: 433 YLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFV 492
           YLNSDPTGT+N GSLWEDAKNQM IETS+WPYNFVES +FPSSDQRG++ G+LLVRD   
Sbjct: 362 YLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPSSDQRGSLRGQLLVRD--- 421

Query: 493 PLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFW 552
                                   RYA+  QMWADSAYVGLAAPGELGSWQR+SKGYQFW
Sbjct: 422 ------------------------RYAKYPQMWADSAYVGLAAPGELGSWQRESKGYQFW 481

Query: 553 TRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGP 612
           TRADE GYFSI+NIR G YNLYAWVPGV+GDYKYD EIT+TP SST LNLLV+DPPR+GP
Sbjct: 482 TRADEHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPRQGP 541

Query: 613 TLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHT-QDNFRQYGLWDRYSELYPHQDLI 672
           TLWEIG PDR AAEFYIP+P+PTLMNR YN+SK H   DNFRQYGLW+RY+ELYPHQDL+
Sbjct: 542 TLWEIGIPDRKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQDLV 601

Query: 673 YNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVV 732
           YNV TDDYRR+WFFAHVTRAT+S  YEATTWQIVFRLQ PK+IG+YMLRLALASSTEAV+
Sbjct: 602 YNVDTDDYRRNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTEAVI 624

Query: 733 DIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQR 792
           DIRFNNPS +R HFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPS+YLVE ENVIYLTQR
Sbjct: 662 DIRFNNPSTKRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYLTQR 624

Query: 793 RHTGPFQGVMYDYIRFEGVE 811
           RHTG FQGVMYDYIRFE VE
Sbjct: 722 RHTGAFQGVMYDYIRFEDVE 624

[Close]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match: A0A5D3CNX4 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003420 PE=3 SV=1)

HSP 1 Score: 1026.9 bits (2654), Expect = 4.5e-296
Identity = 505/724 (69.75%), Postives = 551/724 (76.10%), Query Frame = 0 

Query: 89  GNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVRATEFKVVTANSDQIEL 148
           G  + +   G+DN+LEIHN  +NRGYWDVVWN PN+AS+TDRVRAT FKV+TAN DQ+EL
Sbjct: 10  GLALAMAVPGVDNLLEIHNVHYNRGYWDVVWNRPNKASATDRVRATNFKVITANDDQVEL 69

Query: 149 SFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGD 208
           SFTKTWDPSD+SSLPLNIDKRYI+RRGDSGFYSYGIFERL+GWPQI VDQIRIAYKL GD
Sbjct: 70  SFTKTWDPSDASSLPLNIDKRYIVRRGDSGFYSYGIFERLNGWPQIDVDQIRIAYKLLGD 129

Query: 209 KFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLN 268
           KFHYMAVSDDRQR+MPT  DRL G+                                PL+
Sbjct: 130 KFHYMAVSDDRQRMMPTAEDRLAGK--------------------------------PLD 189

Query: 269 IDKRYILRR-GDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMP 328
             +  +L R  D  F                          QG+                
Sbjct: 190 YPEAVLLTRPADPSF--------------------------QGE---------------- 249

Query: 329 TLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSDEFRTAGPHK 388
                           VDDKYQYSLENMEN+VHGWESSDPHVGFWMITPSDEFRTAGP K
Sbjct: 250 ----------------VDDKYQYSLENMENRVHGWESSDPHVGFWMITPSDEFRTAGPVK 309

Query: 389 QDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTENLGSLW 448
           QDLTSHVGP TLSMFVSTHYAGK+VSMRF EGEAWKKVFGPVFTYLNSDPTGT+N GSLW
Sbjct: 310 QDLTSHVGPITLSMFVSTHYAGKDVSMRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLW 369

Query: 449 EDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQ 508
           EDAKNQM IETS+WPYNFVES +FPSSDQRG++ G+LLVRD                   
Sbjct: 370 EDAKNQMTIETSRWPYNFVESREFPSSDQRGSLRGQLLVRD------------------- 429

Query: 509 SYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFWTRADEQGYFSINNIRP 568
                   RYA+  QMWADSAYVGLAAPGELGSWQR+SKGYQFWTRADE GYFSI+NIR 
Sbjct: 430 --------RYAKYPQMWADSAYVGLAAPGELGSWQRESKGYQFWTRADEHGYFSIDNIRS 489

Query: 569 GNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGPTLWEIGFPDRTAAEFY 628
           G YNLYAWVPGV+GDYKYD EIT+TP SST LNLLV+DPPR+GPTLWEIG PDR AAEFY
Sbjct: 490 GTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPRQGPTLWEIGIPDRKAAEFY 549

Query: 629 IPNPQPTLMNRLYNNSKFHT-QDNFRQYGLWDRYSELYPHQDLIYNVATDDYRRHWFFAH 688
           IP+P+PTLMNR YN+SK H   DNFRQYGLW+RY+ELYPHQDL+YNV TDDYRR+WFFAH
Sbjct: 550 IPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQDLVYNVDTDDYRRNWFFAH 609

Query: 689 VTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVVDIRFNNPSARRVHFTT 748
           VTRAT+S  YEATTWQIVFRLQ PK+IG+YMLRLALASSTEAV+DIRFNNPS +R HFTT
Sbjct: 610 VTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTEAVIDIRFNNPSTKRTHFTT 616

Query: 749 GYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQRRHTGPFQGVMYDYIRF 808
           GYWSSGKDNAIARHGIHGLYWLFNFKVPS+YLVE ENVIYLTQRRHTG FQGVMYDYIRF
Sbjct: 670 GYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYLTQRRHTGAFQGVMYDYIRF 616

Query: 809 EGVE 811
           E VE
Sbjct: 730 EDVE 616

[Close]
BLAST of Lsi01G008240 vs. NCBI nr
Match: XP_038882453.1 (probable rhamnogalacturonate lyase B [Benincasa hispida])

HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 606/810 (74.81%), Postives = 640/810 (79.01%), Query Frame = 0 

Query: 1   MEKKAKRKRQQKKLEFPAMAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNKSMLS 60
           MEKK KR+RQQKKLE  AMAAL+FLFFS +LA A PQQQ S QQRM  NLVENNNK  LS
Sbjct: 1   MEKKGKRRRQQKKLELSAMAALIFLFFSFTLAKAKPQQQQSFQQRMRRNLVENNNKPTLS 60

Query: 61  RDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWN 120
           RDVT EWQN G+VVIDNGLVRVTLSRP+GNVIGLKYKGIDNVLEIHN QHNRGYWDVVWN
Sbjct: 61  RDVTLEWQNHGQVVIDNGLVRVTLSRPDGNVIGLKYKGIDNVLEIHNAQHNRGYWDVVWN 120

Query: 121 HPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFY 180
            PNRAS+TDRVRATEFKV+T NSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGD GFY
Sbjct: 121 RPNRASATDRVRATEFKVITVNSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDYGFY 180

Query: 181 SYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFK 240
           SYGIFERLDGWPQI VDQIRI YKLQGDKFHYMA+SD+RQRIMPTL DRL GR       
Sbjct: 181 SYGIFERLDGWPQIDVDQIRIVYKLQGDKFHYMAISDNRQRIMPTLQDRLMGR------- 240

Query: 241 VVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVD 300
                                    PL   +  +L R                       
Sbjct: 241 -------------------------PLAYPEAVLLTR----------------------- 300

Query: 301 QIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVH 360
                                       ++  L G        VDDKYQYSLENMENKVH
Sbjct: 301 ---------------------------PINSNLKGE-------VDDKYQYSLENMENKVH 360

Query: 361 GWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGE 420
           GWESS+PHVGFWMIT SDEFRTAGP KQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGE
Sbjct: 361 GWESSEPHVGFWMITSSDEFRTAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGE 420

Query: 421 AWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTV 480
           AWKKVFGPVFTYLNSDPTGT +LGSLWEDAKNQMRIE SKWPYNFVES DFPSSDQRGTV
Sbjct: 421 AWKKVFGPVFTYLNSDPTGTGSLGSLWEDAKNQMRIERSKWPYNFVESGDFPSSDQRGTV 480

Query: 481 TGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGS 540
           +GRLLVRD                           RYA+ S MWADSAYVGLAAPGE GS
Sbjct: 481 SGRLLVRD---------------------------RYAKNSHMWADSAYVGLAAPGESGS 540

Query: 541 WQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLN 600
           WQ++SKGYQFWTRADEQGYFSI+NIRPGNYNLYAWVPGV+ DYKYD EI VTP SST LN
Sbjct: 541 WQKESKGYQFWTRADEQGYFSIDNIRPGNYNLYAWVPGVVADYKYDKEIIVTPRSSTNLN 600

Query: 601 LLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWDRY 660
           LLV+ PPR+GPTLWEIG PDRTAAEFYIPNPQPTLMNR YNNSKFHTQDNFRQYGLW++Y
Sbjct: 601 LLVFHPPRQGPTLWEIGVPDRTAAEFYIPNPQPTLMNRFYNNSKFHTQDNFRQYGLWEQY 660

Query: 661 SELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRL 720
           SELYP+QDL+YNV TD+YRRHWFFAHVTRAT+SD YEATTWQIVFRLQGPKQ G+YMLRL
Sbjct: 661 SELYPNQDLVYNVTTDNYRRHWFFAHVTRATTSDNYEATTWQIVFRLQGPKQTGNYMLRL 694

Query: 721 ALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVE 780
           ALASST+AVVDIRFNNPSA R HF+TGYWSSGKDNAIARHGIHGLYWLFNF+VPS+YLVE
Sbjct: 721 ALASSTDAVVDIRFNNPSATRPHFSTGYWSSGKDNAIARHGIHGLYWLFNFQVPSQYLVE 694

Query: 781 DENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           DENVIYLTQRRHTGPFQGVMYDYIRFEGVE
Sbjct: 781 DENVIYLTQRRHTGPFQGVMYDYIRFEGVE 694

[Close]
BLAST of Lsi01G008240 vs. NCBI nr
Match: XP_008440517.1 (PREDICTED: rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >XP_016899370.1 PREDICTED: rhamnogalacturonate lyase B isoform X1 [Cucumis melo])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 573/814 (70.39%), Postives = 623/814 (76.54%), Query Frame = 0 

Query: 3   KKAK-RKRQQKKL-EFPAMAALLFLFFSLSLAMA--NPQQQDSSQQRMVENLVENNNKSM 62
           K AK R  Q KKL  F  MAALLFLFF L+LAMA   PQQQD SQQ     LVENNNK+M
Sbjct: 4   KNAKIRTTQHKKLRRFSTMAALLFLFFGLALAMAVPVPQQQDFSQQ----ILVENNNKTM 63

Query: 63  LSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVV 122
           LSRDVT E QN G+V+IDNG+VRVT SRP+GNVI LKYKG+DN+LEIHN  +NRGYWDVV
Sbjct: 64  LSRDVTLELQNHGQVIIDNGIVRVTFSRPDGNVIALKYKGVDNLLEIHNVHYNRGYWDVV 123

Query: 123 WNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSG 182
           WN PN+AS+TDRVRAT FKV+TAN DQ+ELSFTKTWDPSD+SSLPLNIDKRYI+RRGDSG
Sbjct: 124 WNRPNKASATDRVRATNFKVITANDDQVELSFTKTWDPSDASSLPLNIDKRYIVRRGDSG 183

Query: 183 FYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATE 242
           FYSYGIFERL+GWPQI VDQIRIAYKL GDKFHYMAVSDDRQR+MPT  DRL G+     
Sbjct: 184 FYSYGIFERLNGWPQIDVDQIRIAYKLLGDKFHYMAVSDDRQRMMPTAEDRLAGK----- 243

Query: 243 FKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRR-GDSGFYSYGIFERLDGWPQI 302
                                      PL+  +  +L R  D  F               
Sbjct: 244 ---------------------------PLDYPEAVLLTRPADPSF--------------- 303

Query: 303 AVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMEN 362
                      QG+                                VDDKYQYSLENMEN
Sbjct: 304 -----------QGE--------------------------------VDDKYQYSLENMEN 363

Query: 363 KVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFG 422
           +VHGWESSDPHVGFWMITPSDEFRTAGP KQDLTSHVGP TLSMFVSTHYAGK+VSMRF 
Sbjct: 364 RVHGWESSDPHVGFWMITPSDEFRTAGPVKQDLTSHVGPITLSMFVSTHYAGKDVSMRFR 423

Query: 423 EGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQR 482
           EGEAWKKVFGPVFTYLNSDPTGT+N GSLWEDAKNQM IETS+WPYNFVES +FPSSDQR
Sbjct: 424 EGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPSSDQR 483

Query: 483 GTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGE 542
           G++ G+LLVRD                           RYA+  QMWADSAYVGLAAPGE
Sbjct: 484 GSLRGQLLVRD---------------------------RYAKYPQMWADSAYVGLAAPGE 543

Query: 543 LGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSST 602
           LGSWQR+SKGYQFWTRADE GYFSI+NIR G YNLYAWVPGV+GDYKYD EIT+TP SST
Sbjct: 544 LGSWQRESKGYQFWTRADEHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSST 603

Query: 603 GLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHT-QDNFRQYGL 662
            LNLLV+DPPR+GPTLWEIG PDR AAEFYIP+P+PTLMNR YN+SK H   DNFRQYGL
Sbjct: 604 NLNLLVFDPPRQGPTLWEIGIPDRKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGL 663

Query: 663 WDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSY 722
           W+RY+ELYPHQDL+YNV TDDYRR+WFFAHVTRAT+S  YEATTWQIVFRLQ PK+IG+Y
Sbjct: 664 WERYAELYPHQDLVYNVDTDDYRRNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNY 696

Query: 723 MLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSE 782
           MLRLALASSTEAV+DIRFNNPS +R HFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPS+
Sbjct: 724 MLRLALASSTEAVIDIRFNNPSTKRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQ 696

Query: 783 YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           YLVE ENVIYLTQRRHTG FQGVMYDYIRFE VE
Sbjct: 784 YLVEGENVIYLTQRRHTGAFQGVMYDYIRFEDVE 696

[Close]
BLAST of Lsi01G008240 vs. NCBI nr
Match: KAG7034239.1 (rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1094.7 bits (2830), Expect = 0.0e+00
Identity = 556/814 (68.30%), Postives = 609/814 (74.82%), Query Frame = 0 

Query: 1   MEKKAKRKRQQK----KLEFPAMAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNK 60
           MEK+ K +RQ      KL F AM  LLFLFFSL+LA  N     SSQ+RMV  LV+ NN+
Sbjct: 1   MEKRGKARRQHPYWTWKLGFSAM-PLLFLFFSLTLAHNN-----SSQRRMVRKLVK-NNE 60

Query: 61  SMLSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWD 120
           SMLSRDVT EW+NRG+VV+DNGLVR+TLSRPEGNVI LKY  +DN+LEI NPQ+NRGYWD
Sbjct: 61  SMLSRDVTLEWENRGQVVMDNGLVRITLSRPEGNVIALKYNALDNLLEIRNPQYNRGYWD 120

Query: 121 VVWNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGD 180
           VVWN PNR S+TDRVRAT FKV+TA +DQIELSFTKTW+P+  SS PLNIDKRYILRRGD
Sbjct: 121 VVWNRPNRGSATDRVRATNFKVITATADQIELSFTKTWNPNSHSSCPLNIDKRYILRRGD 180

Query: 181 SGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRA 240
           SGFY+Y IFERLDGWPQI VDQIRI +K+ G KFHYM VSDDRQRIMPT  DR TG   A
Sbjct: 181 SGFYAYAIFERLDGWPQIDVDQIRIVFKILGKKFHYMVVSDDRQRIMPTARDRETGHPLA 240

Query: 241 TEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQ 300
               V+                       P+N +                          
Sbjct: 241 YREAVLLTQ--------------------PVNSN-------------------------- 300

Query: 301 IAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENME 360
                      L+G+                                VDDKYQYSLENME
Sbjct: 301 -----------LKGE--------------------------------VDDKYQYSLENME 360

Query: 361 NKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 420
           NKVHGWES +PHVGFWMITPSDEFRTAGP KQDLTSHVGPTTLSMFVSTHYAGKEVSMRF
Sbjct: 361 NKVHGWESMNPHVGFWMITPSDEFRTAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 420

Query: 421 GEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQ 480
           G GEAWKKVFGPVF YLNSDP G+   GSLWEDAKNQMRIETSKWPY+FV S DFPSS+Q
Sbjct: 421 GVGEAWKKVFGPVFIYLNSDPVGS-GTGSLWEDAKNQMRIETSKWPYSFVGSTDFPSSNQ 480

Query: 481 RGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPG 540
           RGTV+GRLLVRD                           R+A++  MW DSAYVGLAAPG
Sbjct: 481 RGTVSGRLLVRD---------------------------RHAKKWLMWGDSAYVGLAAPG 540

Query: 541 ELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSS 600
           ELGSWQ +SKGYQFWTRAD QGYFSINNIRPGNYNLYAWVPGVIGDYKY N+ITVT GS+
Sbjct: 541 ELGSWQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGST 600

Query: 601 TGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGL 660
           T L LL+YDPPR+GPTLWEIG PDRTAAEFYIP+PQPTLMNR YNNS  HT D FRQYGL
Sbjct: 601 TRLGLLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGL 660

Query: 661 WDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSY 720
           W+RY+EL+PHQDL+YNVATDDYRRHWFFAHVTR T   TY+ATTWQIVFRLQGPKQ G+Y
Sbjct: 661 WERYAELFPHQDLVYNVATDDYRRHWFFAHVTRGTRFGTYQATTWQIVFRLQGPKQSGNY 690

Query: 721 MLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSE 780
            LRLALAS+TEAVV+IRFNNP ARR HF+TGYW+SG+DNAIARHGIHGLYWLFNFKVPS 
Sbjct: 721 TLRLALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSG 690

Query: 781 YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           YLVEDEN+IYLTQRRH GPFQGVMYDYIRFEGV+
Sbjct: 781 YLVEDENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 690

[Close]
BLAST of Lsi01G008240 vs. NCBI nr
Match: XP_022978916.1 (uncharacterized protein LOC111478723 [Cucurbita maxima])

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 552/814 (67.81%), Postives = 608/814 (74.69%), Query Frame = 0 

Query: 1   MEKKAKRKRQQK----KLEFPAMAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNK 60
           MEKK K +RQ+     KL F AM  LLFLFFSL+LA  N     SSQ+RMV  LV+ NN+
Sbjct: 40  MEKKGKARRQRPYWTWKLGFSAM-PLLFLFFSLTLAHKN-----SSQRRMVRKLVK-NNE 99

Query: 61  SMLSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWD 120
           SMLSRDVT EW+NRG+VV+DNGLVR+TLS PEGNV+ LKY  IDN+LEI NPQ+NRGYWD
Sbjct: 100 SMLSRDVTVEWENRGQVVMDNGLVRITLSSPEGNVVALKYNAIDNLLEIRNPQYNRGYWD 159

Query: 121 VVWNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGD 180
           VVWN PNR S+TDRVRAT+FKV+TA +DQIELSFTKTW+P+  SS PLNIDKRYILRRGD
Sbjct: 160 VVWNRPNRGSATDRVRATDFKVITATTDQIELSFTKTWNPNSHSSCPLNIDKRYILRRGD 219

Query: 181 SGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRA 240
           SGFY+Y IFERLDGWPQI VDQIR+ +K+ G KFHYM VSDDRQRIMPT  DR TG   A
Sbjct: 220 SGFYAYAIFERLDGWPQIDVDQIRMVFKILGKKFHYMVVSDDRQRIMPTARDRETGHPLA 279

Query: 241 TEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQ 300
               V+                       P+N +                          
Sbjct: 280 YREAVLLTQ--------------------PINSN-------------------------- 339

Query: 301 IAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENME 360
                      L+G+                                VDDKYQYSLENME
Sbjct: 340 -----------LKGE--------------------------------VDDKYQYSLENME 399

Query: 361 NKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 420
           NKVHGWES +PHVGFWMITPSDEFRTAGP KQDLTSHVGPTTLSMFVSTHYAGKEVSMRF
Sbjct: 400 NKVHGWESMNPHVGFWMITPSDEFRTAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVSMRF 459

Query: 421 GEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQ 480
           GEGEAWKKVFGPVF YLNS P GT   G LWEDAKNQMRIETS+WPY+FV S DFPSS+Q
Sbjct: 460 GEGEAWKKVFGPVFIYLNSGPVGT-GPGLLWEDAKNQMRIETSRWPYSFVGSTDFPSSNQ 519

Query: 481 RGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPG 540
           RGTV+GRLLVRD                           R+A++  MW DSAYVGLAAPG
Sbjct: 520 RGTVSGRLLVRD---------------------------RHAKKWLMWGDSAYVGLAAPG 579

Query: 541 ELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSS 600
           ELGSWQ +SKGYQFWTRAD QGYFSINNIRPGNYNLYAW+PGVIGDYKY N+ITVT GS+
Sbjct: 580 ELGSWQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWIPGVIGDYKYANDITVTLGST 639

Query: 601 TGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGL 660
           T L LL+YDPPR+GPTLWEIG PDRTAAEFYIP+P PTLMNR YNNS  HT D FRQYGL
Sbjct: 640 TRLGLLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPHPTLMNRFYNNSDIHTPDKFRQYGL 699

Query: 661 WDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSY 720
           W+RY+EL+P QDL+YNVATDDYRRHWFFAHVTRAT   TY+ATTWQIVFRLQGPKQ G+Y
Sbjct: 700 WERYAELFPRQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNY 729

Query: 721 MLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSE 780
           MLRLALAS+TEAVV+IRFNNP ARR HF TGYW+SG+DNAIARHGIHGLYWLFNF+VPS 
Sbjct: 760 MLRLALASTTEAVVEIRFNNPLARRAHFLTGYWASGRDNAIARHGIHGLYWLFNFQVPSG 729

Query: 781 YLVEDENVIYLTQRRHTGPFQGVMYDYIRFEGVE 811
           YLVEDEN+IYLTQRRH GPFQGVMYDYIRFEGV+
Sbjct: 820 YLVEDENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 729

[Close]
BLAST of Lsi01G008240 vs. NCBI nr
Match: XP_031742906.1 (rhamnogalacturonate lyase B [Cucumis sativus])

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 540/804 (67.16%), Postives = 599/804 (74.50%), Query Frame = 0 

Query: 19  MAALLFLFFSLSLAMANPQQQDSSQQRMVENLVENNNKSMLSRDVTFEWQNRG------- 78
           MAALLF FF L+LAMA P QQDSSQQ     L ENNNK+MLSRDVT E QN         
Sbjct: 1   MAALLFFFFGLALAMAVPPQQDSSQQ----ILEENNNKAMLSRDVTLELQNHDWKILTFL 60

Query: 79  ----RVVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASS 138
               +V+IDNG+VRVTLSRP+G+VI LKY GIDN+LEI N Q NRGYWDVVWN PN+AS+
Sbjct: 61  FLNLQVIIDNGIVRVTLSRPDGDVIALKYNGIDNLLEIRNVQSNRGYWDVVWNRPNKASA 120

Query: 139 TDRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFER 198
           TDRV AT FKV+T+NSDQ+ELSF KTWDPSD SSLP NIDKRYILRRGDSGFYSYGIFER
Sbjct: 121 TDRVIATNFKVITSNSDQVELSFAKTWDPSDPSSLPSNIDKRYILRRGDSGFYSYGIFER 180

Query: 199 LDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSD 258
           L+GWPQI VDQIRIAYKL GDKFHYMA+SD+RQR+MPT  DRLTG+              
Sbjct: 181 LNGWPQIEVDQIRIAYKLLGDKFHYMAISDNRQRMMPTAEDRLTGK-------------- 240

Query: 259 QIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYK 318
                             PL+  +  +L R                              
Sbjct: 241 ------------------PLDYPEAVLLTR------------------------------ 300

Query: 319 LQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDP 378
                                       R  ++   VDDKYQYSLENMENKVHGWESSDP
Sbjct: 301 ---------------------------PRDPSFRGEVDDKYQYSLENMENKVHGWESSDP 360

Query: 379 HVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFG 438
           HVGFWMITPSDEFRTAGP KQDLTSHVGP TLSMFVSTHYAGK+VSMRF EGEAWKKVFG
Sbjct: 361 HVGFWMITPSDEFRTAGPVKQDLTSHVGPVTLSMFVSTHYAGKDVSMRFQEGEAWKKVFG 420

Query: 439 PVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVR 498
           PVFTY+NSDPTGT   GSLW+DAKNQMRIETSKWPYNFVES +FPSS+QRG+++G+LLVR
Sbjct: 421 PVFTYINSDPTGTGKPGSLWDDAKNQMRIETSKWPYNFVESTEFPSSEQRGSLSGQLLVR 480

Query: 499 DRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKG 558
           D F                           A+  QMW DSAYVGLAAPGELGSWQR+SKG
Sbjct: 481 DGF---------------------------AKYPQMWGDSAYVGLAAPGELGSWQRESKG 540

Query: 559 YQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPP 618
           YQFWTRAD+ GYFSI+NIR G YNLYAWVPGV+GDYKYDN+IT+TP SST LNLLV+ PP
Sbjct: 541 YQFWTRADDHGYFSIDNIRSGTYNLYAWVPGVLGDYKYDNQITITPRSSTNLNLLVFHPP 600

Query: 619 RRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQ-DNFRQYGLWDRYSELYPH 678
           R+GPTLWEIG PDR AAEFYIP+P+PTL N  YN+SK H Q DNFRQYGLW+RY+ELYPH
Sbjct: 601 RQGPTLWEIGIPDRKAAEFYIPSPRPTLTNCFYNDSKLHIQDDNFRQYGLWERYAELYPH 660

Query: 679 QDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASST 738
            DL+YNV TDDY R+WF+AHVTRAT S TYEATTWQIVF +Q PKQIG+YMLRLALASST
Sbjct: 661 GDLVYNVDTDDYHRNWFYAHVTRATGSGTYEATTWQIVFHIQRPKQIGNYMLRLALASST 684

Query: 739 EAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIY 798
           +AV+DIRFNNPS ++ HFTTGYWSSGKDNAIARHGIHGL+WLFNF+VPS+ LVE +NVIY
Sbjct: 721 DAVIDIRFNNPSTKQPHFTTGYWSSGKDNAIARHGIHGLHWLFNFQVPSQLLVEGQNVIY 684

Query: 799 LTQRRHTGPFQGVMYDYIRFEGVE 811
           LTQRRHTG FQGVMYDYIRFE VE
Sbjct: 781 LTQRRHTGEFQGVMYDYIRFEDVE 684

[Close]
BLAST of Lsi01G008240 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 706.8 bits (1823), Expect = 2.0e-203
Identity = 363/749 (48.46%), Postives = 444/749 (59.28%), Query Frame = 0 

Query: 73  VVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVR 132
           VV+DNG+V+VT S PEG + G+KY GIDNVL+  +   +RGYWDVVW  P +   TD++ 
Sbjct: 62  VVVDNGIVQVTFSNPEGLITGIKYHGIDNVLD--DKIDDRGYWDVVWYEPEKKQKTDKLE 121

Query: 133 ATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWP 192
            T+F+++T N +QIE+SFT+TW                I RRG                 
Sbjct: 122 GTKFEIITQNEEQIEISFTRTWT---------------ISRRG----------------- 181

Query: 193 QIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELS 252
                                                                       
Sbjct: 182 ------------------------------------------------------------ 241

Query: 253 FTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDK 312
                     S +PLN+DKRYI+R G SG Y YGI ERL+GWP + +DQIRI +KL   K
Sbjct: 242 ----------SLVPLNVDKRYIIRSGVSGLYMYGILERLEGWPDVDMDQIRIVFKLNPKK 301

Query: 313 FHYMAVSDDRQRIMPTLHDRLTGRSLAYPEA--------------VDDKYQYSLENMENK 372
           F +MA+SDDRQR MP++ DR   +SLAY EA              VDDKY YS+E+ +N 
Sbjct: 302 FDFMAISDDRQRSMPSMADRENSKSLAYKEAVLLTNPSNPMFKGEVDDKYMYSMEDKDNN 361

Query: 373 VHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGE 432
           VHGW SSDP VGFWMITPSDEFR  GP KQDLTSH GP TLSMF STHYAGKE+ M +  
Sbjct: 362 VHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRN 421

Query: 433 GEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRG 492
           GE WKKVFGPV  YLNS       L  LW DAK QM  E   WPY+F+ SED+P   QRG
Sbjct: 422 GEPWKKVFGPVLAYLNSVSPKDSTL-RLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRG 481

Query: 493 TVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGEL 552
           T+ G+ L++D +V  L                   +G++          A+VGLA  GE 
Sbjct: 482 TLEGQFLIKDSYVSRLK-----------------IYGKF----------AFVGLAPIGEA 541

Query: 553 GSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTG 612
           GSWQ +SKGYQFWT+AD +G F I N+R GNY+LYAW  G IGDYKY+  IT+TPGS   
Sbjct: 542 GSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMN 601

Query: 613 LNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWD 672
           +  LVY+PPR GPTLWEIG PDRTA EFYIP+P PTLMN+LY N     QD FRQYGLWD
Sbjct: 602 VGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNP---LQDRFRQYGLWD 661

Query: 673 RYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYML 732
           RY++LYP  DL+Y +   DYR  WFFAHV R   +DTY+ TTWQI+F L+   +IG Y L
Sbjct: 662 RYADLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTL 672

Query: 733 RLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYL 792
           R+ALAS+ ++ + IR N+P +  + FTTG+   GKDNAIARHGIHGLY L++  V    L
Sbjct: 722 RIALASAADSELQIRINDPKSDAI-FTTGF--IGKDNAIARHGIHGLYRLYSIDVAGNLL 672

Query: 793 VEDENVIYLTQRRHTGPFQGVMYDYIRFE 808
              +N I+LTQ R   PFQG+MYDYIR E
Sbjct: 782 SVGDNTIFLTQTRSRTPFQGIMYDYIRLE 672

[Close]
BLAST of Lsi01G008240 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 688.7 bits (1776), Expect = 5.5e-198
Identity = 345/735 (46.94%), Postives = 448/735 (60.95%), Query Frame = 0 

Query: 75  IDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVRAT 134
           +DNG+ RVTLS+P+G V G++Y GIDN+LE+ N + NRGYWD+VW     A   D ++ +
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTAGGFDVIKGS 60

Query: 135 EFKVVTANSDQIELSFTKTWDPS-DSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQ 194
            F+V+  N +QIELSFT+ WDPS +  ++PLNIDKR+++  G SGFY+Y I+E L  WP 
Sbjct: 61  NFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWPA 120

Query: 195 IAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIELSF 254
            ++ + RIA+KL+ +KFHYMAV+DDRQR MP   DRL  R +A  +       + +E  F
Sbjct: 121 FSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQF 180

Query: 255 TKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKF 314
                                  +G+                                  
Sbjct: 181 -----------------------KGE---------------------------------- 240

Query: 315 HYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSD-PHVGFW 374
                                         VDDKYQYS EN +  VHGW  ++ P VGFW
Sbjct: 241 ------------------------------VDDKYQYSCENKDITVHGWICTEQPSVGFW 300

Query: 375 MITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTY 434
           +ITPS E+RT GP KQ+LTSHVGPT L++F+S HY G+++  +F EGEAWKKVFGPVF Y
Sbjct: 301 LITPSHEYRTGGPQKQNLTSHVGPTALAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVY 360

Query: 435 LNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFVP 494
           LNS      +   LW+DAK+QM +E   WPY+F  S+D+  ++QRG V GRLLV+D    
Sbjct: 361 LNSSTDDDNDPLWLWQDAKSQMNVEAESWPYSFPASDDYVKTEQRGNVVGRLLVQD---- 420

Query: 495 LLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFWT 554
                                  RY ++  + A+  YVGLA PG  GSWQR+ K YQFWT
Sbjct: 421 -----------------------RYVDKDFIAANRGYVGLAVPGAAGSWQRECKEYQFWT 480

Query: 555 RADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGPT 614
           R DE+G+F I+ IRPG YNLYAW+PG IGDYKYD+ IT+T G    +  LVY PPR G T
Sbjct: 481 RTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQPPRNGAT 540

Query: 615 LWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWDRYSELYPHQDLIYN 674
           LWEIGFPDR+AAEFY+P+P P  +N LY N      D FRQYGLW+RY+ELYP +DL+Y 
Sbjct: 541 LWEIGFPDRSAAEFYVPDPNPKYINNLYQNH----PDRFRQYGLWERYAELYPDKDLVYV 600

Query: 675 VATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVVDI 734
           V + DYR+ WF+A VTR   + TY+ TTWQI F L+   +  SY LR+A+AS+T + + I
Sbjct: 601 VGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSELQI 614

Query: 735 RFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQRRH 794
           R NN +A  + FT+G    G+DN+IARHGIHGLYWLFN +V    L+E EN ++LTQ R 
Sbjct: 661 RVNNANASPM-FTSGL--IGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRS 614

Query: 795 TGPFQGVMYDYIRFE 808
           T PFQG+MYDYIRFE
Sbjct: 721 TSPFQGIMYDYIRFE 614

[Close]
BLAST of Lsi01G008240 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 686.4 bits (1770), Expect = 2.7e-197
Identity = 352/737 (47.76%), Postives = 442/737 (59.97%), Query Frame = 0 

Query: 73  VVIDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIHNPQHNRGYWDVVWNHPNRASSTDRVR 132
           VV+DNG+++VTLS+P G + G++Y GIDNVLE+ N + NRGYWD+ WN P      D + 
Sbjct: 58  VVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVIS 117

Query: 133 ATEFKVVTANSDQIELSFTKTWDPS-DSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGW 192
              F+V+    +Q+E+SF +TWDPS +   +PLNIDKR+I+ RG SG YSYGI+E L  W
Sbjct: 118 GVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYGIYEHLKDW 177

Query: 193 PQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQIEL 252
           P   + + RIA+KL+ DKFHYMAV+DDR+RIMP   D   GR                  
Sbjct: 178 PGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGR------------------ 237

Query: 253 SFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGD 312
              +T D  ++S L    D R                                   LQG+
Sbjct: 238 --CQTLDYQEASLLTAPCDPR-----------------------------------LQGE 297

Query: 313 KFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPHVGF 372
                                           VDDKYQYS EN + +VHGW S DP VGF
Sbjct: 298 --------------------------------VDDKYQYSCENKDLRVHGWISFDPPVGF 357

Query: 373 WMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGPVFT 432
           W ITPS+EFR+ GP KQ+LTSHVGPTTL++F STHYAGK +  RF  GE WKKV+GPVF 
Sbjct: 358 WQITPSNEFRSGGPLKQNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFI 417

Query: 433 YLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRDRFV 492
           YLNS   G + L  LW+DAK +M  E  +WPY+FV S+D+P S++RGT  GRLL+RDRF+
Sbjct: 418 YLNSTANGDDPL-CLWDDAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDRFI 477

Query: 493 PLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGYQFW 552
                                          + A  AYVGLA PG+ GSWQ + KGYQFW
Sbjct: 478 ---------------------------NNDLISARGAYVGLAPPGDSGSWQIECKGYQFW 537

Query: 553 TRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPRRGP 612
             ADE GYFSI N+RPG YNLYAWVP  IGDY     + VT G    +  +VY+PPR GP
Sbjct: 538 AIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYEPPRDGP 597

Query: 613 TLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWDRYSELYPHQDLIY 672
           TLWEIG PDR A+EF+IP+P PTL+NR+      H QD FRQYGLW +Y+++YP+ DL+Y
Sbjct: 598 TLWEIGIPDRKASEFFIPDPDPTLVNRVL----VHHQDRFRQYGLWKKYTDMYPNDDLVY 657

Query: 673 NVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQIGSYMLRLALASSTEAVVD 732
            V   DYRR WFFAHV R    D +E TTWQI+F L+   Q  +Y LR+A+AS+T A + 
Sbjct: 658 TVGVSDYRRDWFFAHVPR-KKGDVHEGTTWQIIFNLENIDQKANYKLRVAIASATLAELQ 672

Query: 733 IRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIYLTQRR 792
           IR N+  A R  FTTG    G+DN+IARHGIHG+Y L+   +P   LV+ +N I+L Q R
Sbjct: 718 IRINDAEAIRPLFTTGL--IGRDNSIARHGIHGVYMLYAVNIPGNRLVQGDNTIFLKQPR 672

Query: 793 HTGPFQGVMYDYIRFEG 809
             GPFQG+MYDYIR EG
Sbjct: 778 CNGPFQGIMYDYIRLEG 672

[Close]
BLAST of Lsi01G008240 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 678.3 bits (1749), Expect = 7.5e-195
Identity = 347/741 (46.83%), Postives = 451/741 (60.86%), Query Frame = 0 

Query: 75  IDNGLVRVTLSRPEGNVIGLKYKGIDNVLEIH-NPQHNRGYWDVVWNHPNRAS-----ST 134
           ++N  +++TLS PEG V G++Y GIDNVL  + N +++RGYWDVVWN P + +     + 
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 135 DRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERL 194
           DR+ AT+ +V+T N ++IELSFT+TW+ S ++++P+NIDKR+++ +  SGFYSY IFERL
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTSSTTAVPVNIDKRFVMLQNSSGFYSYAIFERL 120

Query: 195 DGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRVRATEFKVVTANSDQ 254
            GWP + +D +R+ +KL   KFHYMA+SDDRQR MP   DR+  R +   +       D 
Sbjct: 121 QGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLDP 180

Query: 255 IELSFTKTWDPSDSSSLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKL 314
           IE  F                       +G+                             
Sbjct: 181 IEPEF-----------------------KGE----------------------------- 240

Query: 315 QGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAYPEAVDDKYQYSLENMENKVHGWESSDPH 374
                                              VDDKY+YS+E+ + KVHGW S++  
Sbjct: 241 -----------------------------------VDDKYEYSMESKDIKVHGWISTNDS 300

Query: 375 VGFWMITPSDEFRTAGPHKQDLTSHVGPTTLSMFVSTHYAGKEVSMRFGEGEAWKKVFGP 434
           VGFW ITPS+EFR+AGP KQ L SHVGPT L++F STHY G ++ M F  GEAWKKVFGP
Sbjct: 301 VGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGP 360

Query: 435 VFTYLNSDPTGTENLGSLWEDAKNQMRIETSKWPYNFVESEDFPSSDQRGTVTGRLLVRD 494
           VF YLNS P G + L  LW +AKNQ +IE  KWPYNF  S+DFP+SDQRG+V+GRLLVRD
Sbjct: 361 VFIYLNSFPKGVDPL-LLWHEAKNQTKIEEEKWPYNFTASDDFPASDQRGSVSGRLLVRD 420

Query: 495 RFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEESQMWADSAYVGLAAPGELGSWQRQSKGY 554
           RF+                               + A+ +YVGLAAPG++GSWQR+ KGY
Sbjct: 421 RFI---------------------------SSEDIPANGSYVGLAAPGDVGSWQRECKGY 480

Query: 555 QFWTRADEQGYFSINNIRPGNYNLYAWVPGVIGDYKYDNEITVTPGSSTGLNLLVYDPPR 614
           QFW++ADE G FSINN+R G YNLYA+ PG IGDY  D    ++PGS   L  LVY+PPR
Sbjct: 481 QFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDLVYEPPR 540

Query: 615 RGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLYNNSKFHTQDNFRQYGLWDRYSELYPHQD 674
            G TLWEIG PDR+AAEFYIP+P P+ +N+LY N      D +RQYGLW+RYSELYP +D
Sbjct: 541 DGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNH----SDKYRQYGLWERYSELYPDED 600

Query: 675 LIYNVATDDYRRHWFFAHVTRATSSDTYEATTWQIVFRLQGPKQ--IGSYMLRLALASST 734
           ++YNV  DDY ++WFF  VTR  ++  Y+ TTWQI F+     +   G++ LR+ALA+S 
Sbjct: 601 MVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALATSN 620

Query: 735 EAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSEYLVEDENVIY 794
            A + +R N+ SA    F T     G+DN IARHGIHGLYWL++  VP+  L    N IY
Sbjct: 661 VAELQVRVNDLSADPPLFRTE--QIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIY 620

Query: 795 LTQRRHTGPFQGVMYDYIRFE 808
           LTQ   T PFQG+MYDYIR E
Sbjct: 721 LTQALATSPFQGLMYDYIRLE 620

[Close]
BLAST of Lsi01G008240 vs. TAIR 10
Match: AT4G37950.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 653.7 bits (1685), Expect = 2.0e-187
Identity = 357/768 (46.48%), Postives = 452/768 (58.85%), Query Frame = 0 

Query: 41  SSQQRMVENLVENNNKSMLSRDVTFEWQNRGRVVIDNGLVRVTLSRPEGNVIGLKYKGID 100
           S   R   N+ +  +K + S  VT +     +VV+DNG++ VT S P+G +  +KY G++
Sbjct: 30  SQTSRNKFNIAKAGHK-LASPPVTLKKVGDNQVVVDNGIIDVTFSSPQGLITRIKYNGLN 89

Query: 101 NVLEIHNPQHNRGYWDVVWNHPNRASSTDRVRATEFKVVTANSDQIELSFTKTWDPSDSS 160
           NVL  ++   NRGYWDVVW  P + SSTD +  T+F +V   S+QIE+SF++T+     S
Sbjct: 90  NVL--NDQIENRGYWDVVWYKPGQVSSTDYLVGTKFDIVNQTSEQIEISFSRTFS-QRGS 149

Query: 161 SLPLNIDKRYILRRGDSGFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQ 220
            +PLN+DKRYI+RRG SG Y Y + ERL GWP + +DQIRI +KL   KF +MAVSD+RQ
Sbjct: 150 GIPLNVDKRYIIRRGVSGIYMYAVLERLIGWPDVDMDQIRIVFKLNTTKFDFMAVSDNRQ 209

Query: 221 RIMPTLHDRLTGRVRATEFKVVTANSDQIELSFTKTWDPSDSSSLPLNIDKRYILRRGDS 280
           +IMP   DR   + RA+                                           
Sbjct: 210 KIMPFDTDRDITKGRASP------------------------------------------ 269

Query: 281 GFYSYGIFERLDGWPQIAVDQIRIAYKLQGDKFHYMAVSDDRQRIMPTLHDRLTGRSLAY 340
                                  +AYK   +  H          I P  H  L G+    
Sbjct: 270 -----------------------LAYK---EAVHL---------INPQNH-MLKGQ---- 329

Query: 341 PEAVDDKYQYSLENMENKVHGWESSDPHVGFWMITPSDEFRTAGPHKQDLTSHVGPTTLS 400
              VDDKY YS+EN +NKVHGW SSD  +GFWMITPSDEF   GP KQDLTSHVGPTTLS
Sbjct: 330 ---VDDKYMYSVENKDNKVHGWISSDQRIGFWMITPSDEFHACGPIKQDLTSHVGPTTLS 389

Query: 401 MFVSTHYAGKEVSMRFGEGEAWKKVFGPVFTYLNSDPTGTENLGSLWEDAKNQMRIETSK 460
           MF S HYAGK+++  +   E WKKVFGPVF YLNS    + NL  LW DAK QM  E   
Sbjct: 390 MFTSVHYAGKDMNTNYKSKEPWKKVFGPVFVYLNS--ASSRNL--LWTDAKRQMVSEVQS 449

Query: 461 WPYNFVESEDFPSSDQRGTVTGRLLVRDRFVPLLSFVFHVLSLSRPQSYVVFFFGRYAEE 520
           WPY+FV+S D+P   QRGTV G+L V DR++                  V + FG++   
Sbjct: 450 WPYDFVKSVDYPLHHQRGTVKGQLFVIDRYI----------------KNVTYLFGQF--- 509

Query: 521 SQMWADSAYVGLAAPGELGSWQRQSKGYQFWTRADEQGYFSINNIRPGNYNLYAWVPGVI 580
                  A+VGLA PGE GSWQ ++KGYQFWTRAD+ G F+I N+RPG Y+LYAWV G I
Sbjct: 510 -------AFVGLALPGEAGSWQTENKGYQFWTRADKMGMFTIANVRPGTYSLYAWVSGFI 569

Query: 581 GDYKYDNEITVTPGSSTGLNLLVYDPPRRGPTLWEIGFPDRTAAEFYIPNPQPTLMNRLY 640
           GDYKY  +IT+TPG    +  +VY PPR GPTLWEIG PDRTAAEFYIP+P PTL  +LY
Sbjct: 570 GDYKYVRDITITPGREIDVGHIVYVPPRNGPTLWEIGQPDRTAAEFYIPDPDPTLFTKLY 629

Query: 641 NNSKFHTQDNFRQYGLWDRYSELYPHQDLIYNVATDDYRRHWFFAHVTRATSSDTYEATT 700
            N   + QD FRQYGLWDRYS LYP  DL++     DY++ WF+AHV R   + TY+ATT
Sbjct: 630 LNYS-NPQDRFRQYGLWDRYSVLYPRNDLVFTAGVSDYKKDWFYAHVNRKAGNGTYKATT 674

Query: 701 WQIVFRLQGPKQIGSYMLRLALASSTEAVVDIRFNNPSARRVHFTTGYWSSGKDNAIARH 760
           WQI F L+   Q   Y LR+ALA+++   + +  N   ++ + F TG    G+DNAIARH
Sbjct: 690 WQIKFNLKAVIQTRIYTLRIALAAASTIDLLVWVNEVDSKPL-FITGL--IGRDNAIARH 674

Query: 761 GIHGLYWLFNFKVPSEYLVEDENVIYLTQRRHTGPFQGVMYDYIRFEG 809
           GIHGLY L+N  V  + L    N I+LT  R++  F GVMYDY+R EG
Sbjct: 750 GIHGLYKLYNIDVHGKLLRVGNNTIFLTHGRNSDSFSGVMYDYLRLEG 674

The following BLAST results are available for this feature:
BLAST of Lsi01G008240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RJP26.7e-2322.87Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE... [more]
A5ABH44.2e-1723.45Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / F... [more]
Q5AZ855.1e-1520.74Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ... [more]
BLAST of Lsi01G008240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B1X30.0e+0070.39Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1[more]
A0A0A0KIQ20.0e+0068.22Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_6G497340 PE=3 SV=... [more]
A0A6J1IPB60.0e+0067.81Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV... [more]
A0A1S3B2191.7e-30870.81Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1[more]
A0A5D3CNX44.5e-29669.75Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
BLAST of Lsi01G008240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882453.10.0e+0074.81probable rhamnogalacturonate lyase B [Benincasa hispida][more]
XP_008440517.10.0e+0070.39PREDICTED: rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >XP_016899370.1... [more]
KAG7034239.10.0e+0068.30rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022978916.10.0e+0067.81uncharacterized protein LOC111478723 [Cucurbita maxima][more]
XP_031742906.10.0e+0067.16rhamnogalacturonate lyase B [Cucumis sativus][more]
BLAST of Lsi01G008240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22620.12.0e-20348.46Rhamnogalacturonate lyase family protein [more]
AT1G09890.15.5e-19846.94Rhamnogalacturonate lyase family protein [more]
AT1G09910.12.7e-19747.76Rhamnogalacturonate lyase family protein [more]
AT1G09880.17.5e-19546.83Rhamnogalacturonate lyase family protein [more]
AT4G37950.12.0e-18746.48Rhamnogalacturonate lyase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 610..806
e-value: 1.7E-10
score: 42.7
NoneNo IPR availableGENE3D2.60.40.1120coord: 521..602
e-value: 5.4E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR32018:SF6RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 232..808
NoneNo IPR availablePANTHERPTHR32018RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 62..233
NoneNo IPR availablePANTHERPTHR32018:SF6RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 62..233
NoneNo IPR availablePANTHERPTHR32018RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 232..808
NoneNo IPR availableCDDcd10320RGL4_Ncoord: 224..438
e-value: 1.85413E-54
score: 187.211
NoneNo IPR availableCDDcd10317RGL4_Ccoord: 614..807
e-value: 4.32024E-41
score: 145.881
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3D2.70.98.10coord: 231..443
e-value: 5.2E-10
score: 41.2
IPR029413Rhamnogalacturonan lyase, domain IIPFAMPF14686fn3_3coord: 526..597
e-value: 3.0E-26
score: 91.0
IPR029413Rhamnogalacturonan lyase, domain IICDDcd10316RGL4_Mcoord: 476..600
e-value: 5.6305E-33
score: 120.431
IPR029411Rhamnogalacturonan lyase, domain IIIPFAMPF14683CBM-likecoord: 612..805
e-value: 4.7E-46
score: 156.8
IPR010325Rhamnogalacturonate lyasePFAMPF06045Rhamnogal_lyasecoord: 53..233
e-value: 1.5E-71
score: 240.2
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 541..602
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 610..807

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G008240.1Lsi01G008240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016829 lyase activity