Lsi01G008140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G008140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Isochorismatase domain-containing protein
Location	chr01: 6448624 .. 6450805 (-)
RNA-Seq Expression	Lsi01G008140
Synteny	Lsi01G008140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTATTATCAAGGTGGACTCCCTTCTTTGACCAACCTTCCTGTTACGAACGACAGGCCTCTCGCATTTGATTTGTTCCCCTTTACCAGAAGAAGAAGAAGACGATGGTCTCGGAGGTTATGGAGTTATTGAAGGAGCACCTTCCAGTAGCTCAAGAGCCTTTCGTTTTGTCCGGTGACGTCAACACCGGCCTCGTCCTCGTCGATATCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGTAATTCCATTCTCTCCTTCTTCTCGTTCACACCTCACTCTGGAAATTATCTCGAATTCGAAATTTTGTTTAATCACGGAGAAGAATTCTATTAGATTTGATGCTTCCGTTGATTTGACTCGATTGTGATTGCTTGTTTTTACAGGCTCCGAAACAGCACGACAAGCAAATTTCTCAAATGGTGGAGGAATCGGCAAGACTCGCCAGAGTTTTCTGCGAGAAAAAGTGGCCTGTATTCGCCTTTCTTGATTCTCATCATCCGGATATTCCAGAGGATCCCTATCCTCCTCATTGCATTGCTGGAACAGACGAATCCAAATTAGTTCCAGGTAACATTTCCAGTACTGATGATCTCCGTAATTTAACCTAACTTTAGCATTTTGCAACCGAAATACATAGCCAATTTTTGAAAACCGATCTTCCGTGTTTGCAGCCTTGCAATGGCTCGAAAATGAGGCGAATGTGACGTCGAGATGCAAAGATTGCATCGATGGATTTCTAGGTAGTTTGGAAAAAGATGGCTCTAACGTTTTCATCGATTGGGTGAAAAACAATCAGATCAAAGTCGTGAGTTTCTCTAATACGTTTTCTTTTTGTGTTTTTTCAATCAGAGAAAACTAAAATTCGATCTGTTTTCTTCTCTGGAAAATAAATAAATAAATAAAAAAGATCTTAGTGGTGGGAATTTGCACGGACATATGCGTGCTGGATTTTGTATCTTCAACATTATCTGCAAGAAATCGCGGTTTCCTTTCACCATTGGAGGATGTGATTGTATATTCCGGTGGCTGCGCTACTTTTGATCTTCCAGTTTCTGTGGCCAAGACTTTAGGAGATGCAATTGCCCATCCACAGGTAACCCGAATTCTTAATCCATTATTGACTTTCATACAAAATAATCCTCTCTTACAATAACATCATGAAAAGGACTGTTTTTGTTTTGTTTTTATCTTGTTCTTTATTTCTCGCGTTTTTTGTCCCACGATTGGCCCAAACCTTATTTTTATTGGAGCTGATAGGACCGCTGCAAGCATATCTGAACTTGCTTTACTTTCTGAGCTTTCGTTACTTGTTTCCATCTTTGTGGTGACGCAAAAAAAAAAAAAAAAAAAGGAAAAATAAATAAGTTGTTGACTGAATGCATAAGAAAAGGAGTAAACAATTCAAGTGTACTAATTATTATATTGAATTAGAGGGATTCTAATTAGTAATACAGTACATTTTATCTAGTTTAAACAGTGTCAAGATCTTAATTCGAGAAGATAGAAAGAGATAATGAAAAAATCAAAGGCAGGTTTGGTATATACCATAAATTAATAATGATTCTTGAATCAAGAATCTTTATGTTGAAGAGTGTGACTTTTAATTTTCTAAGTTTGTGAACTCCATTGTCAAGTACTTTTTCTATACTTGTTGAATAACACTGCACTTGGTTTTGATTTACTTTAATACAGTTGAATTGTGTTTTGATTTGTCAGGAGCTGATGCACCACATAGGCCTGTACATTGCAAGGGGGAGAGGAGCCAAGGTGGTATCGGAGGTTTCAATTAAACCACTATGAGGAAGTCAATTGCTGTCTGCCTTTATTGTTAATAAAATAAGCTCTGCTTTATATAAACATAAAGACATCTTTGTGTATGGAATATTTTTAAGGTAACCTAATTGCATTAGATAGCAGCTTTAAGGATAATAATTAAGTATATAACAATATTTTTAAAGAATACTGATAGACTTTATCACCAATGATCTATTACTAATAGACTCTTACCATTGATATGGTCTATCACTAATAGACTCCTACCATCGATATGGTCTATCACTAATCACTATATTTACAATTGCCCCATAAATATAAGGATAGATTTCATTTAAAATTTGTTGTTCTTTTTCTGTATCTATATCAAGATTGTGTCTTTTTACAAATTGAAATTTAAA

mRNA sequence

AAATTATTATCAAGGTGGACTCCCTTCTTTGACCAACCTTCCTGTTACGAACGACAGGCCTCTCGCATTTGATTTGTTCCCCTTTACCAGAAGAAGAAGAAGACGATGGTCTCGGAGGTTATGGAGTTATTGAAGGAGCACCTTCCAGTAGCTCAAGAGCCTTTCGTTTTGTCCGGTGACGTCAACACCGGCCTCGTCCTCGTCGATATCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGCTCCGAAACAGCACGACAAGCAAATTTCTCAAATGGTGGAGGAATCGGCAAGACTCGCCAGAGTTTTCTGCGAGAAAAAGTGGCCTGTATTCGCCTTTCTTGATTCTCATCATCCGGATATTCCAGAGGATCCCTATCCTCCTCATTGCATTGCTGGAACAGACGAATCCAAATTAGTTCCAGCCTTGCAATGGCTCGAAAATGAGGCGAATGTGACGTCGAGATGCAAAGATTGCATCGATGGATTTCTAGGTAGTTTGGAAAAAGATGGCTCTAACGTTTTCATCGATTGGGTGAAAAACAATCAGATCAAAGTCGAGCTGATGCACCACATAGGCCTGTACATTGCAAGGGGGAGAGGAGCCAAGGTGGTATCGGAGGTTTCAATTAAACCACTATGAGGAAGTCAATTGCTGTCTGCCTTTATTGTTAATAAAATAAGCTCTGCTTTATATAAACATAAAGACATCTTTGTGTATGGAATATTTTTAAGGTAACCTAATTGCATTAGATAGCAGCTTTAAGGATAATAATTAAGTATATAACAATATTTTTAAAGAATACTGATAGACTTTATCACCAATGATCTATTACTAATAGACTCTTACCATTGATATGGTCTATCACTAATAGACTCCTACCATCGATATGGTCTATCACTAATCACTATATTTACAATTGCCCCATAAATATAAGGATAGATTTCATTTAAAATTTGTTGTTCTTTTTCTGTATCTATATCAAGATTGTGTCTTTTTACAAATTGAAATTTAAA

Coding sequence (CDS)

ATGGTCTCGGAGGTTATGGAGTTATTGAAGGAGCACCTTCCAGTAGCTCAAGAGCCTTTCGTTTTGTCCGGTGACGTCAACACCGGCCTCGTCCTCGTCGATATCGTTAATGGCTTCTGCACCGTCGGCGCTGGAAATTTGGCTCCGAAACAGCACGACAAGCAAATTTCTCAAATGGTGGAGGAATCGGCAAGACTCGCCAGAGTTTTCTGCGAGAAAAAGTGGCCTGTATTCGCCTTTCTTGATTCTCATCATCCGGATATTCCAGAGGATCCCTATCCTCCTCATTGCATTGCTGGAACAGACGAATCCAAATTAGTTCCAGCCTTGCAATGGCTCGAAAATGAGGCGAATGTGACGTCGAGATGCAAAGATTGCATCGATGGATTTCTAGGTAGTTTGGAAAAAGATGGCTCTAACGTTTTCATCGATTGGGTGAAAAACAATCAGATCAAAGTCGAGCTGATGCACCACATAGGCCTGTACATTGCAAGGGGGAGAGGAGCCAAGGTGGTATCGGAGGTTTCAATTAAACCACTATGA

Protein sequence

MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMVEESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVTSRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKVELMHHIGLYIARGRGAKVVSEVSIKPL

Homology

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BLAST of Lsi01G008140 vs. ExPASy Swiss-Prot
Match: Q8S8F9 (Nicotinamidase 1 OS=Arabidopsis thaliana OX=3702 GN=NIC1 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-61
Identity = 116/237 (48.95%), Postives = 152/237 (64.14%), Query Frame = 0


Query: 5   VMELLKEHLPV-AQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMVEES 64
           + + LK+ +PV  +EP +L+ D + GLV+VD+VNGFCT+G+GN+AP +H++QIS+MVEES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 65  ARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVTSRC 124
           A+LAR FC++KWPV AF+DSHHPDIPE PYPPHCI GT+ES+LVPAL+WLE+E   T R 
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 125 KDCIDGFLGSLEKDGSNVFIDWVKNNQIKV------------------------------ 179
           KDCI+GF+GS+E DGSNVF+DWVK  QIKV                              
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSP 186

[Close]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL
Match: A0A5D3CLP4 (Nicotinamidase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003290 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 168/242 (69.42%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MV EVMELLKEHLPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQH+KQISQMV
Sbjct: 1   MVLEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHNKQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSHHPDIPE PYPPHCIAGTDESKLVPALQWLENEANVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHHPDIPEHPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIK---------------------------- 180
            RCKDCIDGFLG LEKDGSN+FIDWVK NQIK                            
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKNILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL
Match: A0A1S3B1Y8 (nicotinamidase 1 OS=Cucumis melo OX=3656 GN=LOC103484929 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 168/242 (69.42%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MV EVMELLKEHLPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQH+KQISQMV
Sbjct: 1   MVLEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHNKQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSHHPDIPE PYPPHCIAGTDESKLVPALQWLENEANVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHHPDIPEHPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIK---------------------------- 180
            RCKDCIDGFLG LEKDGSN+FIDWVK NQIK                            
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKNILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL
Match: A0A6J1KQH8 (nicotinamidase 1 OS=Cucurbita maxima OX=3661 GN=LOC111496727 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 165/242 (68.18%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEV+ELLKE+LPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHDKQISQMV
Sbjct: 3   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDKQISQMV 62

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSHHPDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 63  EESARLARVFCEKKWPIFAFLDSHHPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 122

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            +CKDCIDGF+G LEKDGSNVFIDWVKNNQIKV                           
Sbjct: 123 LKCKDCIDGFVGCLEKDGSNVFIDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 182

[Close]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL
Match: A0A6J1HG67 (nicotinamidase 1 OS=Cucurbita moschata OX=3662 GN=LOC111463275 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.9e-83
Identity = 162/242 (66.94%), Postives = 172/242 (71.07%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEV+ELLKE+LPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHD+QISQMV
Sbjct: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSH PDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            +CKDCIDGF+G LEKDGSNVF+DWVKNNQIKV                           
Sbjct: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL
Match: A0A0A0KG59 (Catalytic OS=Cucumis sativus OX=3659 GN=Csa_6G498960 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.3e-82
Identity = 160/240 (66.67%), Postives = 168/240 (70.00%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MV EVMELLKEHLP+ QEPFVLSGD+N GLVLVD+VNGFCTVGAGNLAPKQH++QISQMV
Sbjct: 1   MVLEVMELLKEHLPLTQEPFVLSGDLNIGLVLVDVVNGFCTVGAGNLAPKQHNEQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAF DSHHPDIPE PYPPHCIAGTDESKLVPALQWLENEANVT
Sbjct: 61  EESARLARVFCEKKWPIFAFRDSHHPDIPEPPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIK---------------------------- 179
            RCKDCIDGFLG LEKDGSN+FIDWVK NQIK                            
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKGILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. NCBI nr
Match: XP_038881297.1 (nicotinamidase 1 [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 170/242 (70.25%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEVMELLKEHLPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHDKQISQMV
Sbjct: 1   MVSEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDKQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EES RLARVFCEKKWP+FAFLDSHHPD+PEDPYPPHCIAGTDESKLVPALQWLENEANVT
Sbjct: 61  EESTRLARVFCEKKWPIFAFLDSHHPDVPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            RCKDCIDG LGSLEKDGSNVFIDWVK NQIKV                           
Sbjct: 121 LRCKDCIDGLLGSLEKDGSNVFIDWVKKNQIKVILVLGICTDICVLDFVCSTLSTRNRGF 180

[Close]

BLAST of Lsi01G008140 vs. NCBI nr
Match: XP_008440534.1 (PREDICTED: nicotinamidase 1 [Cucumis melo] >KAA0036347.1 nicotinamidase 1 [Cucumis melo var. makuwa] >TYK12741.1 nicotinamidase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 7.7e-86
Identity = 168/242 (69.42%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MV EVMELLKEHLPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQH+KQISQMV
Sbjct: 1   MVLEVMELLKEHLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHNKQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSHHPDIPE PYPPHCIAGTDESKLVPALQWLENEANVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHHPDIPEHPYPPHCIAGTDESKLVPALQWLENEANVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIK---------------------------- 180
            RCKDCIDGFLG LEKDGSN+FIDWVK NQIK                            
Sbjct: 121 LRCKDCIDGFLGCLEKDGSNIFIDWVKKNQIKNILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. NCBI nr
Match: XP_023002980.1 (nicotinamidase 1 [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 2.5e-84
Identity = 165/242 (68.18%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEV+ELLKE+LPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHDKQISQMV
Sbjct: 3   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDKQISQMV 62

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSHHPDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 63  EESARLARVFCEKKWPIFAFLDSHHPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 122

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            +CKDCIDGF+G LEKDGSNVFIDWVKNNQIKV                           
Sbjct: 123 LKCKDCIDGFVGCLEKDGSNVFIDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 182

[Close]

BLAST of Lsi01G008140 vs. NCBI nr
Match: XP_022962913.1 (nicotinamidase 1 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 8.0e-83
Identity = 162/242 (66.94%), Postives = 172/242 (71.07%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEV+ELLKE+LPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHD+QISQMV
Sbjct: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESARLARVFCEKKWP+FAFLDSH PDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARLARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            +CKDCIDGF+G LEKDGSNVF+DWVKNNQIKV                           
Sbjct: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. NCBI nr
Match: KAG6594908.1 (Nicotinamidase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026874.1 Nicotinamidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.8 bits (808), Expect = 2.3e-82
Identity = 161/242 (66.53%), Postives = 171/242 (70.66%), Query Frame = 0


Query: 1   MVSEVMELLKEHLPVAQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMV 60
           MVSEV+ELLKE+LPV QEPFVLSGDVNTGLVLVD+VNGFCTVGAGNLAPKQHD+QISQMV
Sbjct: 1   MVSEVVELLKENLPVTQEPFVLSGDVNTGLVLVDVVNGFCTVGAGNLAPKQHDEQISQMV 60

Query: 61  EESARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVT 120
           EESAR ARVFCEKKWP+FAFLDSH PDIPE PYPPHCIAGTDE+KLVPALQWLENE NVT
Sbjct: 61  EESARFARVFCEKKWPIFAFLDSHRPDIPEPPYPPHCIAGTDEAKLVPALQWLENETNVT 120

Query: 121 SRCKDCIDGFLGSLEKDGSNVFIDWVKNNQIKV--------------------------- 180
            +CKDCIDGF+G LEKDGSNVF+DWVKNNQIKV                           
Sbjct: 121 LKCKDCIDGFVGCLEKDGSNVFVDWVKNNQIKVILVLGICTDICVLDFVCSTLSARNRGF 180

[Close]

BLAST of Lsi01G008140 vs. TAIR 10
Match: AT2G22570.1 (nicotinamidase 1 )

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-62
Identity = 116/237 (48.95%), Postives = 152/237 (64.14%), Query Frame = 0


Query: 5   VMELLKEHLPV-AQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMVEES 64
           + + LK+ +PV  +EP +L+ D + GLV+VD+VNGFCT+G+GN+AP +H++QIS+MVEES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 65  ARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVTSRC 124
           A+LAR FC++KWPV AF+DSHHPDIPE PYPPHCI GT+ES+LVPAL+WLE+E   T R 
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 125 KDCIDGFLGSLEKDGSNVFIDWVKNNQIKV------------------------------ 179
           KDCI+GF+GS+E DGSNVF+DWVK  QIKV                              
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSP 186

[Close]

BLAST of Lsi01G008140 vs. TAIR 10
Match: AT2G22570.2 (nicotinamidase 1 )

HSP 1 Score: 225.7 bits (574), Expect = 2.9e-59
Identity = 99/150 (66.00%), Postives = 128/150 (85.33%), Query Frame = 0


Query: 5   VMELLKEHLPV-AQEPFVLSGDVNTGLVLVDIVNGFCTVGAGNLAPKQHDKQISQMVEES 64
           + + LK+ +PV  +EP +L+ D + GLV+VD+VNGFCT+G+GN+AP +H++QIS+MVEES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 65  ARLARVFCEKKWPVFAFLDSHHPDIPEDPYPPHCIAGTDESKLVPALQWLENEANVTSRC 124
           A+LAR FC++KWPV AF+DSHHPDIPE PYPPHCI GT+ES+LVPAL+WLE+E   T R 
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 125 KDCIDGFLGSLEKDGSNVFIDWVKNNQIKV 154
           KDCI+GF+GS+E DGSNVF+DWVK  QIKV
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKV 156

The following BLAST results are available for this feature:

BLAST of Lsi01G008140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F9	1.8e-61	48.95	Nicotinamidase 1 OS=Arabidopsis thaliana OX=3702 GN=NIC1 PE=1 SV=1	[more]

BLAST of Lsi01G008140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLP4	3.7e-86	69.42	Nicotinamidase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003...	[more]
A0A1S3B1Y8	3.7e-86	69.42	nicotinamidase 1 OS=Cucumis melo OX=3656 GN=LOC103484929 PE=3 SV=1	[more]
A0A6J1KQH8	1.2e-84	68.18	nicotinamidase 1 OS=Cucurbita maxima OX=3661 GN=LOC111496727 PE=3 SV=1	[more]
A0A6J1HG67	3.9e-83	66.94	nicotinamidase 1 OS=Cucurbita moschata OX=3662 GN=LOC111463275 PE=3 SV=1	[more]
A0A0A0KG59	7.3e-82	66.67	Catalytic OS=Cucumis sativus OX=3659 GN=Csa_6G498960 PE=3 SV=1	[more]

BLAST of Lsi01G008140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881297.1	8.3e-88	70.25	nicotinamidase 1 [Benincasa hispida]	[more]
XP_008440534.1	7.7e-86	69.42	PREDICTED: nicotinamidase 1 [Cucumis melo] >KAA0036347.1 nicotinamidase 1 [Cucum...	[more]
XP_023002980.1	2.5e-84	68.18	nicotinamidase 1 [Cucurbita maxima]	[more]
XP_022962913.1	8.0e-83	66.94	nicotinamidase 1 [Cucurbita moschata]	[more]
KAG6594908.1	2.3e-82	66.53	Nicotinamidase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026874.1 ...	[more]

BLAST of Lsi01G008140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22570.1	1.3e-62	48.95	nicotinamidase 1	[more]
AT2G22570.2	2.9e-59	66.00	nicotinamidase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000868	Isochorismatase-like	PFAM	PF00857	Isochorismatase	coord: 28..152 e-value: 3.3E-19 score: 69.7
IPR036380	Isochorismatase-like superfamily	GENE3D	3.40.50.850		coord: 27..155 e-value: 2.1E-15 score: 59.2
IPR036380	Isochorismatase-like superfamily	SUPERFAMILY	52499	Isochorismatase-like hydrolases	coord: 27..151
IPR044717	Nicotinamidase 1	PANTHER	PTHR47297	FAMILY NOT NAMED	coord: 1..152
IPR044717	Nicotinamidase 1	PANTHER	PTHR47297	FAMILY NOT NAMED	coord: 154..178
None	No IPR available	PANTHER	PTHR47297:SF1	NICOTINAMIDASE 1	coord: 1..152
None	No IPR available	PANTHER	PTHR47297:SF1	NICOTINAMIDASE 1	coord: 154..178
None	No IPR available	CDD	cd00431	cysteine_hydrolases	coord: 30..152 e-value: 2.17162E-17 score: 73.0718

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G008140.1	Lsi01G008140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019365	pyridine nucleotide salvage
molecular_function	GO:0008936	nicotinamidase activity