Lsi01G008060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G008060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription factor bHLH131-like
Location	chr01: 6366025 .. 6367611 (-)
RNA-Seq Expression	Lsi01G008060
Synteny	Lsi01G008060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTATTTTATGAACATTATCATATTACCATGGGTAAATTCTGGTCATGCGGATAGTTGATATGTGATTTTGTTAAAGCACTCCGAGTCTTCATATCATTATAAATACATAATCTTTACCACAAATAAATAAAGCAATTATGAGAAAATGGCAATATTAGTTTCCATATCTTATCATTATCAAAATGCATAGTAAATGGCAATTATGAGATTGGATATTGCATTATCATCCTTAACCACAAATAAATAAAACAATTAATTCCTTCTCTCCCACTTTCTGAAAATGGAGAATTTCCTTGTATAAAAAAAACATCAATAGCCATACTTTACACCTATGAATACTATTCCTTTCCTTTTTGATACTGTGGACCTTTTATTTTTCTTCTTCATATATGCGTTGTTTATAGTCTGAACTAGTCATGCAGTCCATCCAGAGCTACCCAACTTTAGGAACTATGCATCAGATCTATTCTCAAGCACAACCTCCAATGATCAAGCATTACAGCTGCCCAATCTCATCCTTTCCAAGGAAGGAGCCTAAATTACATGCAGCCTTGAAGCACCGTTTGGCAGAGCAGAACAGAAGGAACAGAATCAGTGGCCAATATGCCACCCTCCGTGCCATCCTTCCCAGCTTATCCAAAGTTAGTCCGAACTTCCTCTCAAAAATCTATCTTCAATTGTTTTTTTAAGCCAAAAACGTTAAACTTTCTGTATATTGACACTTGAAAAGAAATGATTTTGTTGTGAACACAGACAGATAAGAGTAAGCTGAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTAGGGTGAAGGAGCTTAAGAAGCTTGTATCAGAAAAGAGAGTAGCCAATCGTGAGTTCAGGGATTGTGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACAATGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCAGGACATCATGGCAGAATTGGCAAAAGCACTGAAAACAGTGAAAGTGAAGCTGGTGAGAGCTGAAATGGTGACTGTGGGTGGAAGGAACAGATTTTCTCTGTGGATGCAAGGTCCTAAGGAAGGAGCTGGTGGGCTTAAGAGAGTGTTGGAGGCTGTTATGAGGAGGCCTTCTTGGATTGCTAAAAAACCCAGAAATGCTTGGCATTCTCGAGCTCCAACAGCTAATAATTTTAACAGAGTGGCTTCTTGAAAAAAAAATATCTTATTTTTCTTCCAAGTAAACATAATTAGCGGTTTGTAATTAGAGGTCAATTGTGATGGCCTTTCTGGATCCATCCAGCCTTTAATTCATAATACATCCGAACATAATTGGTCAAATTATACGTGATTGCTGACACTTCTTTTTCTTCTTATGTTGTAAATGAAACTGAATGAAAAAATAAATTGATATTACAGGTTATTTTTGAAGAATTCGATCGATGGACACACAATGCCCATTTACCCATCAACCTCAAGTAGAAACATCTGGTTGAGATTTGAATTATAATGTAACCTTTTCAAGATGTGAGTGGAAAGTAATTATTTAAATTTCAAAGAATAATCTCTAACATGCTGCTAACCTCT

mRNA sequence

ACTATTTTATGAACATTATCATATTACCATGGGTAAATTCTGGTCATGCGGATAGTTGATATGTGATTTTGTTAAAGCACTCCGAGTCTTCATATCATTATAAATACATAATCTTTACCACAAATAAATAAAGCAATTATGAGAAAATGGCAATATTAGTTTCCATATCTTATCATTATCAAAATGCATAGTAAATGGCAATTATGAGATTGGATATTGCATTATCATCCTTAACCACAAATAAATAAAACAATTAATTCCTTCTCTCCCACTTTCTGAAAATGGAGAATTTCCTTGTATAAAAAAAACATCAATAGCCATACTTTACACCTATGAATACTATTCCTTTCCTTTTTGATACTGTGGACCTTTTATTTTTCTTCTTCATATATGCGTTGTTTATAGTCTGAACTAGTCATGCAGTCCATCCAGAGCTACCCAACTTTAGGAACTATGCATCAGATCTATTCTCAAGCACAACCTCCAATGATCAAGCATTACAGCTGCCCAATCTCATCCTTTCCAAGGAAGGAGCCTAAATTACATGCAGCCTTGAAGCACCGTTTGGCAGAGCAGAACAGAAGGAACAGAATCAGTGGCCAATATGCCACCCTCCGTGCCATCCTTCCCAGCTTATCCAAAACAGATAAGAGTAAGCTGAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTAGGGTGAAGGAGCTTAAGAAGCTTGTATCAGAAAAGAGAGTAGCCAATCGTGAGTTCAGGGATTGTGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACAATGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCAGGACATCATGGCAGAATTGGCAAAAGCACTGAAAACAGTGAAAGTGAAGCTGGTGAGAGCTGAAATGGTGACTGTGGGTGGAAGGAACAGATTTTCTCTGTGGATGCAAGGTCCTAAGGAAGGAGCTGGTGGGCTTAAGAGAGTGTTGGAGGCTGTTATGAGGAGGCCTTCTTGGATTGCTAAAAAACCCAGAAATGCTTGGCATTCTCGAGCTCCAACAGCTAATAATTTTAACAGAGTGGCTTCTTGAAAAAAAAATATCTTATTTTTCTTCCAAGTAAACATAATTAGCGGTTTGTAATTAGAGGTCAATTGTGATGGCCTTTCTGGATCCATCCAGCCTTTAATTCATAATACATCCGAACATAATTGGTCAAATTATACGTGATTGCTGACACTTCTTTTTCTTCTTATGTTGTAAATGAAACTGAATGAAAAAATAAATTGATATTACAGGTTATTTTTGAAGAATTCGATCGATGGACACACAATGCCCATTTACCCATCAACCTCAAGTAGAAACATCTGGTTGAGATTTGAATTATAATGTAACCTTTTCAAGATGTGAGTGGAAAGTAATTATTTAAATTTCAAAGAATAATCTCTAACATGCTGCTAACCTCT

Coding sequence (CDS)

ATGCAGTCCATCCAGAGCTACCCAACTTTAGGAACTATGCATCAGATCTATTCTCAAGCACAACCTCCAATGATCAAGCATTACAGCTGCCCAATCTCATCCTTTCCAAGGAAGGAGCCTAAATTACATGCAGCCTTGAAGCACCGTTTGGCAGAGCAGAACAGAAGGAACAGAATCAGTGGCCAATATGCCACCCTCCGTGCCATCCTTCCCAGCTTATCCAAAACAGATAAGAGTAAGCTGAAAAAGGCTTTTGTGCTTTCTGAGACAATCCGTAGGGTGAAGGAGCTTAAGAAGCTTGTATCAGAAAAGAGAGTAGCCAATCGTGAGTTCAGGGATTGTGGGATACCTAGTGGGGCAGATAGATTGAGCTTAGAACAATGTGATGGTGGTGAAGGGATGGTGAAGGCTGTAATGAGCTGCGAGGACAGGCAGGACATCATGGCAGAATTGGCAAAAGCACTGAAAACAGTGAAAGTGAAGCTGGTGAGAGCTGAAATGGTGACTGTGGGTGGAAGGAACAGATTTTCTCTGTGGATGCAAGGTCCTAAGGAAGGAGCTGGTGGGCTTAAGAGAGTGTTGGAGGCTGTTATGAGGAGGCCTTCTTGGATTGCTAAAAAACCCAGAAATGCTTGGCATTCTCGAGCTCCAACAGCTAATAATTTTAACAGAGTGGCTTCTTGA

Protein sequence

MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWMQGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS

Homology

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BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot
Match: P0CB25 (Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 74/176 (42.05%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 37  RKEPKLHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKE 96
           + E K  AA KH  AE+ RR RI+ Q+ATLR ILP+L K D     KA VL ET+R   E
Sbjct: 85  KTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQD-----KASVLGETVRYFNE 144

Query: 97  LKKLVSEKRVANREFRDCGIPSGADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALK 156
           LKK+V +             PS  D L L+ C+    + + V SC DR+ +M+E+A+++K
Sbjct: 145 LKKMVQDIPTT---------PSLEDNLRLDHCNNNRDLARVVFSCSDREGLMSEVAESMK 204

Query: 157 TVKVKLVRAEMVTVGGRNRFSLWMQG--PKEGAGGLKRVLEAVMRRPSWIAKKPRN 211
            VK K VRAE++TVGGR + +L++QG    EG   LK+ L+ V+   S    K  N
Sbjct: 205 AVKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLVVNGKSSSEAKNNN 246

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BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 60/173 (34.68%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A+  H  AE+ RR RI+   A LR+ILP+ +KTDK+ L     L+E I+ VKELK+  
Sbjct: 172 LAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASL-----LAEVIQHVKELKRET 231

Query: 102 SEKRVANREFRDCGIPSGADRLSL-----EQCDGGEGMVKAVMSCEDRQDIMAELAKALK 161
           S     N       +P+ +D L++     E+   G  ++KA + CEDR D++ ++ K LK
Sbjct: 232 SVISETNL------VPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLK 291

Query: 162 TVKVKLVRAEMVTVGGRNRFSLWMQGPKEGA---------GGLKRVLEAVMRR 201
            +++K ++AE+ TVGGR +  L++ G +            G ++  L+AVM +
Sbjct: 292 AMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

[Close]

BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A   H+ AE+ RR RI+     LR +L   SKTDK+ L     L++ ++RV+ELK+  
Sbjct: 65  LAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATL-----LAKVVQRVRELKQQT 124

Query: 102 SEKRVANREFRDCGIPSGADRLSL----EQCDGGEGMVKAVMSCEDRQDIMAELAKALKT 161
            E   +++      +PS  D +S+    +  + G  + KA + CEDR D++ +L + LK+
Sbjct: 125 LETSDSDQTL----LPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKS 184

Query: 162 VKVKLVRAEMVTVGGRNRFSLWMQGPKEGAG-----GLKRVLEAVMRRPS 203
           + +K +RAEMVT+GGR R  L +   KE  G      L+  L++++ R S
Sbjct: 185 LNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSS 225

[Close]

BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 49/142 (34.51%), Postives = 86/142 (60.56%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A+  H  AE+ RR RI+   A LR+ILP+ +KTDK+ L     L+E I+ +KELK+  
Sbjct: 130 LAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASL-----LAEVIQHMKELKRQT 189

Query: 102 SEKRVANREFRDCGIPSGADRLSLEQC---DGGEGMVKAVMSCEDRQDIMAELAKALKTV 161
           S+     +      +P+  D L+++     + G  +++A   C+DR D+M ++  ALK++
Sbjct: 190 SQITDTYQ------VPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSL 249

Query: 162 KVKLVRAEMVTVGGRNRFSLWM 181
           +++ ++AE+ TVGGR +  L++
Sbjct: 250 RLRTLKAEIATVGGRVKNILFL 260

[Close]

BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 39  EPKLHAALK-HRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKEL 98
           E K  A+L+ H+ AE+ RR RI+     LR +L   SKTDKS L     L++ ++RVKEL
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTL-----LAKVVQRVKEL 98

Query: 99  KKLVSEKRVANREFRDCGIPSGADRLS---LEQCDGGEG---MVKAVMSCEDRQDIMAEL 158
           K+          E  D  IPS  D +S   +E C  G+    + K    CEDR +++ +L
Sbjct: 99  KQ-------QTLEITDETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDL 158

Query: 159 AKALKTVKVKLVRAEMVTVGGRNRFSLWMQGPKEGAG-----GLKRVLEAVMRRPS 203
            + LK+++++ + A+M TVGGR R  L +   KE  G      L+  L++++ R S
Sbjct: 159 METLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL
Match: A0A5D3CNR8 (Transcription factor bHLH131-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003220 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107
Identity = 204/227 (89.87%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSI SYPT GTMHQIY QAQ PMI  YSCPISSFPRKEPKL+AA+KHRLAEQNRRNRIS
Sbjct: 1   MQSIPSYPTSGTMHQIYPQAQAPMINPYSCPISSFPRKEPKLNAAVKHRLAEQNRRNRIS 60

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQYATLRAILPSLSKTDKSKLKKAFVLSETIR VKELKKLVSEKRVANREFRDCGIPSGA
Sbjct: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVANREFRDCGIPSGA 120

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRL+LEQC+GGEGMVKAVMSCEDRQDIMAELAKALKT+KVKLVRAEMVTVGGRN+FSLW+
Sbjct: 121 DRLTLEQCNGGEGMVKAVMSCEDRQDIMAELAKALKTMKVKLVRAEMVTVGGRNKFSLWI 180

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG GG+KRVLEAVM+RPSWIA+KPRN W SRA T NNFN VAS
Sbjct: 181 QGPKEGHGGIKRVLEAVMKRPSWIARKPRNVWQSRASTDNNFNGVAS 227

[Close]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL
Match: A0A1S3B0Y8 (transcription factor bHLH131-like OS=Cucumis melo OX=3656 GN=LOC103484938 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107
Identity = 204/227 (89.87%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSI SYPT GTMHQIY QAQ PMI  YSCPISSFPRKEPKL+AA+KHRLAEQNRRNRIS
Sbjct: 1   MQSIPSYPTSGTMHQIYPQAQAPMINPYSCPISSFPRKEPKLNAAVKHRLAEQNRRNRIS 60

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQYATLRAILPSLSKTDKSKLKKAFVLSETIR VKELKKLVSEKRVANREFRDCGIPSGA
Sbjct: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVANREFRDCGIPSGA 120

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRL+LEQC+GGEGMVKAVMSCEDRQDIMAELAKALKT+KVKLVRAEMVTVGGRN+FSLW+
Sbjct: 121 DRLTLEQCNGGEGMVKAVMSCEDRQDIMAELAKALKTMKVKLVRAEMVTVGGRNKFSLWI 180

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG GG+KRVLEAVM+RPSWIA+KPRN W SRA T NNFN VAS
Sbjct: 181 QGPKEGHGGIKRVLEAVMKRPSWIARKPRNVWQSRASTDNNFNGVAS 227

[Close]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL
Match: A0A0A0KG67 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499060 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.8e-101
Identity = 197/228 (86.40%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MQSIQSYPTLGTM-HQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRI 60
           MQSIQ YPT GTM H++Y QAQPP+I  YS PI SF RKEPK +AA+KHRLAEQNRRNRI
Sbjct: 1   MQSIQCYPTSGTMHHRMYPQAQPPVINPYSSPIPSFARKEPKFNAAVKHRLAEQNRRNRI 60

Query: 61  SGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSG 120
           SGQYATLRAILPSLSKTDKSKLKKAFVLSETIR VKELKKLVSEKRVA+REFRDCGIPSG
Sbjct: 61  SGQYATLRAILPSLSKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVASREFRDCGIPSG 120

Query: 121 ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLW 180
           ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKT+KVKLV+AEMVTVGGRN+FSLW
Sbjct: 121 ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTMKVKLVKAEMVTVGGRNKFSLW 180

Query: 181 MQGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           +QGPKEG  GLKRVLEAVMRRPSWIA+KPRN W SRA T +NFN V S
Sbjct: 181 IQGPKEGHSGLKRVLEAVMRRPSWIARKPRNVWQSRASTDSNFNGVTS 228

[Close]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL
Match: A0A6J1GFY0 (transcription factor bHLH131-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111453823 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.6e-96
Identity = 190/227 (83.70%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSIQSYPT GTMHQ+Y Q QP MIKHYS PISSFPRKE  LHAA KHRLAEQ+RRNRIS
Sbjct: 8   MQSIQSYPTSGTMHQMYPQGQPLMIKHYS-PISSFPRKENTLHAAQKHRLAEQSRRNRIS 67

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQY TLRAILPS+ KTD SKLKKAFVLSETIR VKE KKLVSEKR  NRE  +CGIP GA
Sbjct: 68  GQYDTLRAILPSIYKTDMSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGNCGIPGGA 127

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRLSLE CDGGEGMVKAVMSCEDR +IMAELAKALKTVKVKLVRAEMVT+GGRN+FSLWM
Sbjct: 128 DRLSLEHCDGGEGMVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFSLWM 187

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG G LKRVLEAVMRRPSWIA+K R++WHSRA TA NFNR  S
Sbjct: 188 QGPKEGPGVLKRVLEAVMRRPSWIARKHRSSWHSRASTAYNFNRATS 233

[Close]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL
Match: A0A6J1GG06 (transcription factor bHLH131-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453823 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.6e-96
Identity = 190/227 (83.70%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSIQSYPT GTMHQ+Y Q QP MIKHYS PISSFPRKE  LHAA KHRLAEQ+RRNRIS
Sbjct: 14  MQSIQSYPTSGTMHQMYPQGQPLMIKHYS-PISSFPRKENTLHAAQKHRLAEQSRRNRIS 73

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQY TLRAILPS+ KTD SKLKKAFVLSETIR VKE KKLVSEKR  NRE  +CGIP GA
Sbjct: 74  GQYDTLRAILPSIYKTDMSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGNCGIPGGA 133

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRLSLE CDGGEGMVKAVMSCEDR +IMAELAKALKTVKVKLVRAEMVT+GGRN+FSLWM
Sbjct: 134 DRLSLEHCDGGEGMVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFSLWM 193

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG G LKRVLEAVMRRPSWIA+K R++WHSRA TA NFNR  S
Sbjct: 194 QGPKEGPGVLKRVLEAVMRRPSWIARKHRSSWHSRASTAYNFNRATS 239

[Close]

BLAST of Lsi01G008060 vs. NCBI nr
Match: XP_008440558.1 (PREDICTED: transcription factor bHLH131-like [Cucumis melo] >KAA0036340.1 transcription factor bHLH131-like protein [Cucumis melo var. makuwa] >TYK12734.1 transcription factor bHLH131-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 204/227 (89.87%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSI SYPT GTMHQIY QAQ PMI  YSCPISSFPRKEPKL+AA+KHRLAEQNRRNRIS
Sbjct: 1   MQSIPSYPTSGTMHQIYPQAQAPMINPYSCPISSFPRKEPKLNAAVKHRLAEQNRRNRIS 60

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQYATLRAILPSLSKTDKSKLKKAFVLSETIR VKELKKLVSEKRVANREFRDCGIPSGA
Sbjct: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVANREFRDCGIPSGA 120

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRL+LEQC+GGEGMVKAVMSCEDRQDIMAELAKALKT+KVKLVRAEMVTVGGRN+FSLW+
Sbjct: 121 DRLTLEQCNGGEGMVKAVMSCEDRQDIMAELAKALKTMKVKLVRAEMVTVGGRNKFSLWI 180

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG GG+KRVLEAVM+RPSWIA+KPRN W SRA T NNFN VAS
Sbjct: 181 QGPKEGHGGIKRVLEAVMKRPSWIARKPRNVWQSRASTDNNFNGVAS 227

[Close]

BLAST of Lsi01G008060 vs. NCBI nr
Match: XP_004143550.2 (transcription factor bHLH131 [Cucumis sativus] >KGN48710.1 hypothetical protein Csa_004403 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 197/228 (86.40%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MQSIQSYPTLGTM-HQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRI 60
           MQSIQ YPT GTM H++Y QAQPP+I  YS PI SF RKEPK +AA+KHRLAEQNRRNRI
Sbjct: 1   MQSIQCYPTSGTMHHRMYPQAQPPVINPYSSPIPSFARKEPKFNAAVKHRLAEQNRRNRI 60

Query: 61  SGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSG 120
           SGQYATLRAILPSLSKTDKSKLKKAFVLSETIR VKELKKLVSEKRVA+REFRDCGIPSG
Sbjct: 61  SGQYATLRAILPSLSKTDKSKLKKAFVLSETIRGVKELKKLVSEKRVASREFRDCGIPSG 120

Query: 121 ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLW 180
           ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKT+KVKLV+AEMVTVGGRN+FSLW
Sbjct: 121 ADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTMKVKLVKAEMVTVGGRNKFSLW 180

Query: 181 MQGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           +QGPKEG  GLKRVLEAVMRRPSWIA+KPRN W SRA T +NFN V S
Sbjct: 181 IQGPKEGHSGLKRVLEAVMRRPSWIARKPRNVWQSRASTDSNFNGVTS 228

[Close]

BLAST of Lsi01G008060 vs. NCBI nr
Match: XP_038883454.1 (LOW QUALITY PROTEIN: transcription factor bHLH131-like [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 196/229 (85.59%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSIQSYPT GTMHQIY +AQP MIKHY CP SSFPRKEPKLHAALKH  AEQ RRNRIS
Sbjct: 1   MQSIQSYPTSGTMHQIYPEAQPSMIKHYGCPFSSFPRKEPKLHAALKHHFAEQKRRNRIS 60

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQYATLRAILP LSKTDKSKLKKAFVLSETIRRVKELKKLVSEKR ANREFRDCGIPSG 
Sbjct: 61  GQYATLRAILPRLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRAANREFRDCGIPSGX 120

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           D LSLEQCDGG+GMVKAVMS EDRQDIMAELAKALKTVKVKL+RAE+VTVGGRN+F LWM
Sbjct: 121 DTLSLEQCDGGKGMVKAVMSYEDRQDIMAELAKALKTVKVKLLRAELVTVGGRNKFXLWM 180

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNF--NRVAS 228
           Q PK G GGLKRVLEAVM R SWIA+KPRN+WHSRAPTA     NR+ S
Sbjct: 181 QRPK-GPGGLKRVLEAVMWRTSWIARKPRNSWHSRAPTAKKLAVNRLIS 228

[Close]

BLAST of Lsi01G008060 vs. NCBI nr
Match: XP_023545046.1 (transcription factor bHLH131-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 191/227 (84.14%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSIQSYPT GTMHQ+Y Q QP MIKHYS PISSFPRKE  LHAA KHRLAEQ+RRNRIS
Sbjct: 11  MQSIQSYPTSGTMHQMYPQGQPLMIKHYS-PISSFPRKENTLHAAQKHRLAEQSRRNRIS 70

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQY TLRAILPS+ KTD SKLKKAFVLSETIR VKE KKLVSEKR  NRE  DCGIPSGA
Sbjct: 71  GQYDTLRAILPSIYKTDMSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGDCGIPSGA 130

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRLSLE CDGGEGMVKAVMSCEDR +IMAELAKALKTVKVKLVRAEMVT+GGRN+F+LWM
Sbjct: 131 DRLSLEHCDGGEGMVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFALWM 190

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG G LKRVLEAVMRRPSWIA+K R++WHSRA TA NFNR  S
Sbjct: 191 QGPKEGPGVLKRVLEAVMRRPSWIARKHRSSWHSRASTAYNFNRATS 236

[Close]

BLAST of Lsi01G008060 vs. NCBI nr
Match: XP_023545047.1 (transcription factor bHLH131-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 191/227 (84.14%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MQSIQSYPTLGTMHQIYSQAQPPMIKHYSCPISSFPRKEPKLHAALKHRLAEQNRRNRIS 60
           MQSIQSYPT GTMHQ+Y Q QP MIKHYS PISSFPRKE  LHAA KHRLAEQ+RRNRIS
Sbjct: 8   MQSIQSYPTSGTMHQMYPQGQPLMIKHYS-PISSFPRKENTLHAAQKHRLAEQSRRNRIS 67

Query: 61  GQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLVSEKRVANREFRDCGIPSGA 120
           GQY TLRAILPS+ KTD SKLKKAFVLSETIR VKE KKLVSEKR  NRE  DCGIPSGA
Sbjct: 68  GQYDTLRAILPSIYKTDMSKLKKAFVLSETIRMVKEFKKLVSEKRATNREVGDCGIPSGA 127

Query: 121 DRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALKTVKVKLVRAEMVTVGGRNRFSLWM 180
           DRLSLE CDGGEGMVKAVMSCEDR +IMAELAKALKTVKVKLVRAEMVT+GGRN+F+LWM
Sbjct: 128 DRLSLEHCDGGEGMVKAVMSCEDRPNIMAELAKALKTVKVKLVRAEMVTMGGRNKFALWM 187

Query: 181 QGPKEGAGGLKRVLEAVMRRPSWIAKKPRNAWHSRAPTANNFNRVAS 228
           QGPKEG G LKRVLEAVMRRPSWIA+K R++WHSRA TA NFNR  S
Sbjct: 188 QGPKEGPGVLKRVLEAVMRRPSWIARKHRSSWHSRASTAYNFNRATS 233

[Close]

BLAST of Lsi01G008060 vs. TAIR 10
Match: AT4G38070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 74/176 (42.05%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 37   RKEPKLHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKE 96
            + E K  AA KH  AE+ RR RI+ Q+ATLR ILP+L K D     KA VL ET+R   E
Sbjct: 1342 KTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQD-----KASVLGETVRYFNE 1401

Query: 97   LKKLVSEKRVANREFRDCGIPSGADRLSLEQCDGGEGMVKAVMSCEDRQDIMAELAKALK 156
            LKK+V +             PS  D L L+ C+    + + V SC DR+ +M+E+A+++K
Sbjct: 1402 LKKMVQDIPTT---------PSLEDNLRLDHCNNNRDLARVVFSCSDREGLMSEVAESMK 1461

Query: 157  TVKVKLVRAEMVTVGGRNRFSLWMQG--PKEGAGGLKRVLEAVMRRPSWIAKKPRN 211
             VK K VRAE++TVGGR + +L++QG    EG   LK+ L+ V+   S    K  N
Sbjct: 1462 AVKAKAVRAEIMTVGGRTKCALFVQGVNGNEGLVKLKKSLKLVVNGKSSSEAKNNN 1503

[Close]

BLAST of Lsi01G008060 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17
Identity = 60/173 (34.68%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A+  H  AE+ RR RI+   A LR+ILP+ +KTDK+ L     L+E I+ VKELK+  
Sbjct: 172 LAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASL-----LAEVIQHVKELKRET 231

Query: 102 SEKRVANREFRDCGIPSGADRLSL-----EQCDGGEGMVKAVMSCEDRQDIMAELAKALK 161
           S     N       +P+ +D L++     E+   G  ++KA + CEDR D++ ++ K LK
Sbjct: 232 SVISETNL------VPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLK 291

Query: 162 TVKVKLVRAEMVTVGGRNRFSLWMQGPKEGA---------GGLKRVLEAVMRR 201
            +++K ++AE+ TVGGR +  L++ G +            G ++  L+AVM +
Sbjct: 292 AMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEK 333

[Close]

BLAST of Lsi01G008060 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A   H+ AE+ RR RI+     LR +L   SKTDK+ L     L++ ++RV+ELK+  
Sbjct: 65  LAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATL-----LAKVVQRVRELKQQT 124

Query: 102 SEKRVANREFRDCGIPSGADRLSL----EQCDGGEGMVKAVMSCEDRQDIMAELAKALKT 161
            E   +++      +PS  D +S+    +  + G  + KA + CEDR D++ +L + LK+
Sbjct: 125 LETSDSDQTL----LPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKS 184

Query: 162 VKVKLVRAEMVTVGGRNRFSLWMQGPKEGAG-----GLKRVLEAVMRRPS 203
           + +K +RAEMVT+GGR R  L +   KE  G      L+  L++++ R S
Sbjct: 185 LNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSS 225

[Close]

BLAST of Lsi01G008060 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 )

HSP 1 Score: 75.1 bits (183), Expect = 8.1e-14
Identity = 49/142 (34.51%), Postives = 86/142 (60.56%), Query Frame = 0


Query: 42  LHAALKHRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKELKKLV 101
           L A+  H  AE+ RR RI+   A LR+ILP+ +KTDK+ L     L+E I+ +KELK+  
Sbjct: 130 LAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASL-----LAEVIQHMKELKRQT 189

Query: 102 SEKRVANREFRDCGIPSGADRLSLEQC---DGGEGMVKAVMSCEDRQDIMAELAKALKTV 161
           S+     +      +P+  D L+++     + G  +++A   C+DR D+M ++  ALK++
Sbjct: 190 SQITDTYQ------VPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSL 249

Query: 162 KVKLVRAEMVTVGGRNRFSLWM 181
           +++ ++AE+ TVGGR +  L++
Sbjct: 250 RLRTLKAEIATVGGRVKNILFL 260

[Close]

BLAST of Lsi01G008060 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 8.1e-14
Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 39  EPKLHAALK-HRLAEQNRRNRISGQYATLRAILPSLSKTDKSKLKKAFVLSETIRRVKEL 98
           E K  A+L+ H+ AE+ RR RI+     LR +L   SKTDKS L     L++ ++RVKEL
Sbjct: 39  EDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTL-----LAKVVQRVKEL 98

Query: 99  KKLVSEKRVANREFRDCGIPSGADRLS---LEQCDGGEG---MVKAVMSCEDRQDIMAEL 158
           K+          E  D  IPS  D +S   +E C  G+    + K    CEDR +++ +L
Sbjct: 99  KQ-------QTLEITDETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDL 158

Query: 159 AKALKTVKVKLVRAEMVTVGGRNRFSLWMQGPKEGAG-----GLKRVLEAVMRRPS 203
            + LK+++++ + A+M TVGGR R  L +   KE  G      L+  L++++ R S
Sbjct: 159 METLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSS 202

The following BLAST results are available for this feature:

BLAST of Lsi01G008060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CB25	2.5e-23	42.05	Transcription factor bHLH131 OS=Arabidopsis thaliana OX=3702 GN=BHLH131 PE=2 SV=...	[more]
Q9S7Y1	1.7e-16	34.68	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
O80674	1.6e-14	34.71	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
Q9LS08	1.1e-12	34.51	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
Q9LET0	1.1e-12	35.23	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]

BLAST of Lsi01G008060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNR8	8.3e-107	89.87	Transcription factor bHLH131-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3B0Y8	8.3e-107	89.87	transcription factor bHLH131-like OS=Cucumis melo OX=3656 GN=LOC103484938 PE=4 S...	[more]
A0A0A0KG67	6.8e-101	86.40	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499060 PE=4 S...	[more]
A0A6J1GFY0	6.6e-96	83.70	transcription factor bHLH131-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1GG06	6.6e-96	83.70	transcription factor bHLH131-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Lsi01G008060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440558.1	1.7e-106	89.87	PREDICTED: transcription factor bHLH131-like [Cucumis melo] >KAA0036340.1 transc...	[more]
XP_004143550.2	1.4e-100	86.40	transcription factor bHLH131 [Cucumis sativus] >KGN48710.1 hypothetical protein ...	[more]
XP_038883454.1	3.5e-99	85.59	LOW QUALITY PROTEIN: transcription factor bHLH131-like [Benincasa hispida]	[more]
XP_023545046.1	2.7e-96	84.14	transcription factor bHLH131-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023545047.1	2.7e-96	84.14	transcription factor bHLH131-like isoform X4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G008060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38070.1	1.7e-24	42.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68810.1	1.2e-17	34.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41130.1	1.1e-15	34.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	8.1e-14	34.51	basic helix-loop-helix 32	[more]
AT3G56770.1	8.1e-14	35.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 49..103 e-value: 7.2E-6 score: 35.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 47..97 e-value: 7.4E-8 score: 32.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 43..97 score: 12.582328
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 39..107 e-value: 2.4E-10 score: 42.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 46..109
None	No IPR available	PANTHER	PTHR45844:SF17	TRANSCRIPTION FACTOR BHLH131	coord: 21..203
None	No IPR available	PANTHER	PTHR45844	TRANSCRIPTION FACTOR BHLH30	coord: 21..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G008060.1	Lsi01G008060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity