![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lsi01G007980 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGCAGTATGGGTAAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCAGTCCACCTTCAAATCTAGATCTCTTAATTGACCCAAGGATCAACGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATCCCGAATGTCGCCGCTCCGCCGATGTGCGATGCCGCTCCAGCTGGGTTGTCGGCCGCTGGTGCTTGAGGTGCAGGTGAAGGCACCTCGTTTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCAGCGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTCGCCGGAGCTGGAGCAGGTACCACTGGTGCCGGTGATGGAGCTTCCGGAGCGGGTGAGGGCGACGCCGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAAAACGACCGGAGAAGGCGCTGGCGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGCGCCGGCGCTGGCGCC AGGCAGTATGGGTAAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCAGTCCACCTTCAAATCTAGATCTCTTAATTGACCCAAGGATCAACGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATCCCGAATGTCGCCGCTCCGCCGATGTGCGATGCCGCTCCAGCTGGGTTGTCGGCCGCTGGTGAAGGCACCTCGTTTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCAGCGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTCGCCGGAGCTGGAGCAGGTACCACTGGTGCCGGTGATGGAGCTTCCGGAGCGGGTGAGGGCGACGCCGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAAAACGACCGGAGAAGGCGCTGGCGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGCGCCGGCGCTGGCGCC ATGGGTAAGGGATTAAAAAAGCAAAAGAATTCTACCAGTCATCACTCCAGTCCACCTTCAAATCTAGATCTCTTAATTGACCCAAGGATCAACGTCTACGCTAAAATCACTGCGAACAGAGTTCCAGCAACAGCGATCCCGAATGTCGCCGCTCCGCCGATGTGCGATGCCGCTCCAGCTGGGTTGTCGGCCGCTGGTGAAGGCACCTCGTTTCCGGTGGGTGAAGGAGGAGAAGCAATGGGTGGAACTACAGGACCACCAGCGGGAGATCCCGAAGGAGTAGGACTGGAGCTTGGAGCTGGGGTAGGAGCAGTAGTCGCCGGAGCTGGAGCAGGTACCACTGGTGCCGGTGATGGAGCTTCCGGAGCGGGTGAGGGCGACGCCGGAGCCGGTGAAGGCGATGGTGCTCTGTTTGGCGTCGGAGTCGGAGATGGAGGGAAAACGACCGGAGAAGGCGCTGGCGTGGCTGGTGGCGGAGTTAGAGGCTGTGAAGAACCCGGCGCCGGCGCTGGCGCC MGKGLKKQKNSTSHHSSPPSNLDLLIDPRINVYAKITANRVPATAIPNVAAPPMCDAAPAGLSAAGEGTSFPVGEGGEAMGGTTGPPAGDPEGVGLELGAGVGAVVAGAGAGTTGAGDGASGAGEGDAGAGEGDGALFGVGVGDGGKTTGEGAGVAGGGVRGCEEPGAGAGA Homology
BLAST of Lsi01G007980 vs. ExPASy TrEMBL
Match: A0A6J1BUI4 (merozoite surface antigen 2-like OS=Momordica charantia OX=3673 GN=LOC111005482 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 6.0e-25 Identity = 93/147 (63.27%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of Lsi01G007980 vs. NCBI nr
Match: XP_011658485.2 (jacalin-related lectin 34-like [Cucumis sativus] >KAE8647550.1 hypothetical protein Csa_004127 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29 Identity = 96/125 (76.80%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of Lsi01G007980 vs. NCBI nr
Match: XP_022132682.1 (merozoite surface antigen 2-like [Momordica charantia]) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24 Identity = 93/147 (63.27%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of Lsi01G007980 vs. NCBI nr
Match: KAG7034220.1 (hypothetical protein SDJN02_03947, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.8 bits (273), Expect = 2.4e-20 Identity = 89/132 (67.42%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of Lsi01G007980 vs. NCBI nr
Match: KAG7026860.1 (hypothetical protein SDJN02_10867, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 85.9 bits (211), Expect = 3.7e-13 Identity = 72/132 (54.55%), Postives = 77/132 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
|