Lsi01G007930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G007930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr01: 6243740 .. 6247409 (+)
RNA-Seq Expression	Lsi01G007930
Synteny	Lsi01G007930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTGCAGATTGAAGTGTGTTCGGACCCTAGCTCATTTTGAGTTTTGTTCTACACTCTGTTCTCCTGAATGTTCCGGTCCCTGTTTTCACCTCCCCAAAGTTCCTATTGTTGTTTTGCCTCGCCCACAGCCTCGCCCACAGCCACGCCCGCCGCCGCCTCTGCTTCCGACTTCCAGCGTCCCTCCCCAATCCCATCCCCCAGGTAGGACGACTCTACTTCTTCTTAGTTTGATCACTACAGCAACTCTGGTCGCCGCCATCTTCATGGTTTGTCTTCTTTTCAAGAAATTTAGGGAGTATCGCAACTCCAGGAATGATCGCCGGCCGGTTCTGTTCGATGTCCAACGAGAGAATCTATCCGATAACGATGAAGAAGGACCCGTCCTCGACCACCACGTATGGTTCATCAACACCGTCGGTCTTCAGCAATCGGTAATCGATTCAATCACCATGTTCAAATATAGGAAGGAAGATAAATTAATCGATGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGATGAGAGCCTTCGACTGTTGCCCAAATGCAGCCACGCCTTCCATGTTCCTTGCATCGATACGTGGTTGAGATCGCACAAAAACTGCCCTCTCTGTCGCGCTCCAGTGTTGTCCAATTCCGCCGCCCCAAATTTAGCCCCCATCGAACCGATCACGAACCAGCCGCCGATCATCGAAGAATCCCAAGTGGAAACAGAGGCCATCGAGGAAGAAAACAGAGGAGATGAAAATATTGGAGAAGAGTGTAGCAATAGTGGAGAAAATTCGGAAATTCCCATTAAAGGGCTATCTCGGACCTTGAGCAATTTGACTGAGAATCAAAATCACGTGGCTGTAATGGGAATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCGATGGCGATTTATCAAGCCACAGCCAAAATACAAATTCCAGAAGAAGGGTGTTCTTCAAATGGGACGTTAGTGGAAGTGAAGAATTCAGTTTCCTCTCGGAATCTTCCATTTCCAAAGGGAGGATTTGGAAATCAGAGCTTGTACAATCTAGTGAAGAGCATTTCATTTGGACGTTCTATGCAGAAAGGGGGGATCTCAATGAAAAGATTCAGTTCGGGAAGAAGGAAGTTACAATGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCACTGTGAGAGATGAAGAAGTCGTAATGGCTGTGAAAATCAACATCTTTTCTCTGCAGTTTGAAGAAGCTGCCGTGTTGCTGTAGTATGTGTATGAGGGTGATGAATCTGCAGCAAACTGTGGACTGTTCTGTTGGGGATTTGTAAGGTAGTATACGAATAGAATGACTAAAGAAGACGACTGATGATTTGAATTATGGATGATATAAGTTCGATGTTACTGTTAATATAAGAGTAATAAATCAATTTTTGGCTATACTTCCATTACAGATTATTGTACTTGTACAGCTAAGATCTCTACTTCATCAAGTATTATATTCAATCAAAGATTAACTAACTATATGTCTCATAAGGGGGGAAAAAAAACTATGAGGTTAGTGAGTTTGTATCTATAATGGATTAATATAGTTTAGTTTGTAGTATATAATAAACCTTTTCTGTCAATTGAATCTCCCTCTTATTTTATATTTATATTTATTTACGTATGATTTTCCATGTGTTTGATTATCTAGTCTAGTCAAATGCTATTCGAAGTAAATAACACTCTTTGTTTGGTTGTTTATGCTGTACTTGTAAATAATTCTTTACTTTTAGTAAATTTCTTTTATATTATTTAAACGCACACAATTAATTTGGGTTTAAAAAGTGCTTAAACCCAATATACTTTTTAAACCCAATATACGAACATCCGTTAAACATCATTGTTTTAAATATAATAAACAATAAAGGAATTAAAAATTTGATCCCGTAGTTTGAAGAAGAGTTGAAATTAATCCATGTAATTTTAAAAGTTTAAATTCAACCAAATAGTTTGACAAATACAACTGGTCCTTAGCTTTTGATGACCATTACAGAGCCAGTAGAGCAGAAATAAAAGGAAATAGACATACCAATTCCTACTTAAGTGCATTAGTTAAAGGCCCAACTTGGAGTCTGCCTTCACAAAAGAGGTTTACACTGTTTACTTTAAAAAAAATGGTTTTACCTTAGAATGCTTCAAAAGAATTATGGAACATCATCAAACATGACTTTATGTTTCAAGAGCAACACTATTAACGTGGTTCTAAATGAAACCTACAATCAATTATCAACCAAAAATTAAGTCTCTGAAATAAGTGTTTGAGCCAAAAAACAAATGGATTTCCTGTTGAGATTTCCAATCAAGTCCAAAAAGCTTGGCATCAGGCAACAAATTCCTCCACTCCCTCTAGTAATCACGGGCGGATCTATAAAAAGGCTTGGAGCACGTGTCTCCCTCACATCGTATTATTTTAAATATATATATATATATATAATATTTAATTAAATATATAAAAATATGTATATATACTTTGAATATATATTAAAGTCTTCCCCAATTCTAAGAATGTAGTTTGCTTCCGTTGTCGCTAAGTGAACTTTAAAATAACGTGTCTTTTATTATATTAACCAATTTGGCAGTTTTTTTCTTCTTCGAAGAAAACCAATTTGGCAGTTGTTCCTTCTCTTTTATTATATAAAAATTGTCCGAAATTAATCTAAGATTTAACTAACCATGAAGATAACTAATCTAAAATTTAACTAACCATATAGAGATATAAGATTAGCTATTTAGGTTCTTAAAAGAAACTTGACACAAGACCAAATAGGGAAGTTTTATGTCTATGTTAAGTCACTATTGGTGTGATGCGGCCGCATAGTTTAAAGCATAAGATCTTTTCAGTTGAAGTTAGAGATATCTCTGTTTATCAACTATTGTTTACTGTTTTTCAGTGGAATGGTATGGTAGTTGAGGGATGGTATGCTTCAGATCTTGAAGTCCTATGCGTAATTGAGGGATAACGAGGATTGATATGCAAAGGACGAGATACAGAGATAAAGGTCCCTTTTTTTATTTCAGCCTCTACCAGCCACAGGAGTCAATTGGTAACAGTAAAAGTAAAACGAGAAAGTTGTAAAGATACCGTGAGAGAAAAGTGAACTAAGAAAAAGAAGATGATGATGGAATTTGGGGCAATATCTTTTCAGGCCTCTCGCCCTTCTTTCAATCTCATTAGCGGGAGAACTAAAAATTGGAAGAGAATCTTAACCCCCACCGCCACTGAAAATTTCCAATTCCTCAAGCGAAGTCACTCTTCACTCTTCCCTTCTTTCCCTTTTACGCTTTCTACACCACCATATGCACATTTCTATTGATACCCTTTTCCATTTCTTTTTACTCTACAAAATTGTTCTTTTCTTCGCTTTTATTTTAATGGGTTTGCTTCTGTCTCCATCTTTCATAAGATATTGCTTAAGCATTCATTTAATACAATGAGATTGGCGAACACATCTCGGTCTTTATGCTAGTTCGCCCATCTCAATTTGGTATTATCTCTGAGATACGGAAGGAATCACTGAGATTCTCCTACTCAAATGCTGCTTTTGATCGGAGCAACCCCTTCATTCCTAGCTGCGTATTCTTGACTCCCTTACTATTCTCTTCCAAATGGTCACTATATTTTTGGGTTTGTGA

mRNA sequence

ATGTCCTGCAGATTGAAGTGTGTTCGGACCCTAGCTCATTTTGAGTTTTGTTCTACACTCTGTTCTCCTGAATGTTCCGGTCCCTGTTTTCACCTCCCCAAAGTTCCTATTGTTGTTTTGCCTCGCCCACAGCCTCGCCCACAGCCACGCCCGCCGCCGCCTCTGCTTCCGACTTCCAGCGTCCCTCCCCAATCCCATCCCCCAGGTAGGACGACTCTACTTCTTCTTAGTTTGATCACTACAGCAACTCTGGTCGCCGCCATCTTCATGGTTTGTCTTCTTTTCAAGAAATTTAGGGAGTATCGCAACTCCAGGAATGATCGCCGGCCGGTTCTGTTCGATGTCCAACGAGAGAATCTATCCGATAACGATGAAGAAGGACCCGTCCTCGACCACCACGTATGGTTCATCAACACCGTCGGTCTTCAGCAATCGGTAATCGATTCAATCACCATGTTCAAATATAGGAAGGAAGATAAATTAATCGATGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGATGAGAGCCTTCGACTGTTGCCCAAATGCAGCCACGCCTTCCATGTTCCTTGCATCGATACGTGGTTGAGATCGCACAAAAACTGCCCTCTCTGTCGCGCTCCAGTGTTGTCCAATTCCGCCGCCCCAAATTTAGCCCCCATCGAACCGATCACGAACCAGCCGCCGATCATCGAAGAATCCCAAGTGGAAACAGAGGCCATCGAGGAAGAAAACAGAGGAGATGAAAATATTGGAGAAGAGTGTAGCAATAGTGGAGAAAATTCGGAAATTCCCATTAAAGGGCTATCTCGGACCTTGAGCAATTTGACTGAGAATCAAAATCACGTGGCTGTAATGGGAATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCGATGGCGATTTATCAAGCCACAGCCAAAATACAAATTCCAGAAGAAGGGTGTTCTTCAAATGGGACGTTAGTGGAAGTGAAGAATTCAGTTTCCTCTCGGAATCTTCCATTTCCAAAGGGAGGATTTGGAAATCAGAGCTTGTACAATCTAGTGAAGAGCATTTCATTTGGACGTTCTATGCAGAAAGGGGGGATCTCAATGAAAAGATTCAGTTCGGGAAGAAGGAAGTTACAATGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCACTTTTGAAGAAGCTGCCGTGTTGCTGTAGTATGTGTATGAGGGTGATGAATCTGCAGCAAACTGTGGACTGTTCTGTTGGGGATTTAGTAATAAATCAATTTTTGGCTATACTTCCATTACAGATTATTGTACTTGTACAGCTAAGATCTCTACTTCATCAATCTAGTCAAATGCTATTCGAAGTAAATAACACTCTTTGTTTGGTTGTTTATGCTGTACTTTGGAATGGTATGGTAGTTGAGGGATGGTATGCTTCAGATCTTGAAGTCCTATGCCTGCGTATTCTTGACTCCCTTACTATTCTCTTCCAAATGGTCACTATATTTTTGGGTTTGTGA

Coding sequence (CDS)

ATGTCCTGCAGATTGAAGTGTGTTCGGACCCTAGCTCATTTTGAGTTTTGTTCTACACTCTGTTCTCCTGAATGTTCCGGTCCCTGTTTTCACCTCCCCAAAGTTCCTATTGTTGTTTTGCCTCGCCCACAGCCTCGCCCACAGCCACGCCCGCCGCCGCCTCTGCTTCCGACTTCCAGCGTCCCTCCCCAATCCCATCCCCCAGGTAGGACGACTCTACTTCTTCTTAGTTTGATCACTACAGCAACTCTGGTCGCCGCCATCTTCATGGTTTGTCTTCTTTTCAAGAAATTTAGGGAGTATCGCAACTCCAGGAATGATCGCCGGCCGGTTCTGTTCGATGTCCAACGAGAGAATCTATCCGATAACGATGAAGAAGGACCCGTCCTCGACCACCACGTATGGTTCATCAACACCGTCGGTCTTCAGCAATCGGTAATCGATTCAATCACCATGTTCAAATATAGGAAGGAAGATAAATTAATCGATGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGATGAGAGCCTTCGACTGTTGCCCAAATGCAGCCACGCCTTCCATGTTCCTTGCATCGATACGTGGTTGAGATCGCACAAAAACTGCCCTCTCTGTCGCGCTCCAGTGTTGTCCAATTCCGCCGCCCCAAATTTAGCCCCCATCGAACCGATCACGAACCAGCCGCCGATCATCGAAGAATCCCAAGTGGAAACAGAGGCCATCGAGGAAGAAAACAGAGGAGATGAAAATATTGGAGAAGAGTGTAGCAATAGTGGAGAAAATTCGGAAATTCCCATTAAAGGGCTATCTCGGACCTTGAGCAATTTGACTGAGAATCAAAATCACGTGGCTGTAATGGGAATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCGATGGCGATTTATCAAGCCACAGCCAAAATACAAATTCCAGAAGAAGGGTGTTCTTCAAATGGGACGTTAGTGGAAGTGAAGAATTCAGTTTCCTCTCGGAATCTTCCATTTCCAAAGGGAGGATTTGGAAATCAGAGCTTGTACAATCTAGTGAAGAGCATTTCATTTGGACGTTCTATGCAGAAAGGGGGGATCTCAATGAAAAGATTCAGTTCGGGAAGAAGGAAGTTACAATGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCACTTTTGAAGAAGCTGCCGTGTTGCTGTAGTATGTGTATGAGGGTGATGAATCTGCAGCAAACTGTGGACTGTTCTGTTGGGGATTTAGTAATAAATCAATTTTTGGCTATACTTCCATTACAGATTATTGTACTTGTACAGCTAAGATCTCTACTTCATCAATCTAGTCAAATGCTATTCGAAGTAAATAACACTCTTTGTTTGGTTGTTTATGCTGTACTTTGGAATGGTATGGTAGTTGAGGGATGGTATGCTTCAGATCTTGAAGTCCTATGCCTGCGTATTCTTGACTCCCTTACTATTCTCTTCCAAATGGTCACTATATTTTTGGGTTTGTGA

Protein sequence

MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSSVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRENLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAVMGIRRSVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKSISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPLLKKLPCCCSMCMRVMNLQQTVDCSVGDLVINQFLAILPLQIIVLVQLRSLLHQSSQMLFEVNNTLCLVVYAVLWNGMVVEGWYASDLEVLCLRILDSLTILFQMVTIFLGL

Homology

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BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.3e-31
Identity = 103/255 (40.39%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 46  RPQPRPPPPLLPTSSVPPQSHPPGRTTLLL-LSLITTATLVAAIFMVCLLFKKFREYRN- 105
           R  P PPPP       PP   PP   +LLL  S+    +++  +F+V  L+    + R  
Sbjct: 23  RQYPPPPPP-------PP---PPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRI 82

Query: 106 SRNDRRPVLFDVQRENLSDNDEEGPVLD-HHVWFINTVGLQQSVIDSITMFKYRKEDKLI 165
           S     P   D  ++   D  EE    D HHVW I TVGL +S I+SIT+  ++K + +I
Sbjct: 83  SAASVTP--GDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 142

Query: 166 DGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLA 225
           DG++CS+CL EF++DESLRLLPKCSHAFH+ CIDTWL SHKNCPLCRAPVL  +  P+  
Sbjct: 143 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQ- 202

Query: 226 PIEPITNQPPIIEESQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTEN 285
             E  TN  P            + E+  D    ++ S S  N  I    L R  S+L   
Sbjct: 203 --ETETNHQP------------DSESSNDLRGRQDSSRSRRNHNI---FLPRAQSDLANY 247

Query: 286 QNHVAVMGIRRSVSM 298
                V  +RRS S+
Sbjct: 263 CGSGRVENVRRSFSI 247

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BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 5.1e-29
Identity = 81/228 (35.53%), Postives = 117/228 (51.32%), Query Frame = 0


Query: 141 GLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLR 200
           GL +S+I SIT++KYRK D  ++ SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 201 SHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVETE---------AIEEENRGD 260
           SH NCPLCRA ++++SA      I  +TNQ  + E + + T           +E     +
Sbjct: 193 SHSNCPLCRAFIVTSSA----VEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRN 252

Query: 261 ENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAVMGIRRSVSMDSVSAMA-----IY 320
           E + E  +      +    G  R  ++L      V++  I R +  D  SA       + 
Sbjct: 253 ETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSIADILREIEDDEESAGVGTSRWVE 312

Query: 321 QATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVK 355
           +   +   P  G ++N T       V S      + G+     Y L K
Sbjct: 313 EGEGEKTPPPSGSAANQTNGISNFLVRSSMAAMKRSGYDRAKNYRLPK 356

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BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 3.3e-28
Identity = 125/406 (30.79%), Postives = 189/406 (46.55%), Query Frame = 0


Query: 17  CST-LCSPECSGPCFHLPKVPIV--VLPRPQPRPQPRP-PPPLLPTSSVPPQSHPPGRTT 76
           CS  +C P C   C+  P    +   LP     PQP P P P +    +P Q      ++
Sbjct: 23  CSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQD---SSSS 82

Query: 77  LLLLSLITTATLVAAIFMV--CLLFKKFRE---------YRNSRNDRRPVLFDVQRENLS 136
           L  +S+IT    V AI +    L+ K F +         Y++   D   V+     E   
Sbjct: 83  LDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVM----EEEFQ 142

Query: 137 DNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLR 196
           D ++    +DH +W I T GLQQS+I+SIT+  Y++ D LI+ +DC +CL EF++DESLR
Sbjct: 143 DREQ----VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLR 202

Query: 197 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPV--LSNSAAPNLAPIEPITNQPPIIEESQV 256
           LLPKC+HAFH+ CIDTWL SH NCPLCRA +  +S +      P+E      P    S +
Sbjct: 203 LLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVE----VTPGGSGSHL 262

Query: 257 ETEAIEEENRGD-ENIGEECSNSGENSEIPIKGL---SRTLSNLTENQNHVAVM-GIRRS 316
           E + ++EE+ G+ EN  +      ++S+I I+     S    + TE +  V V+      
Sbjct: 263 ENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERVRVLKECMDP 322

Query: 317 VSMDSVSAMAIYQA-TAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLV 376
              DSV++++  +     +  P + C +        N     +     GG  NQ   +  
Sbjct: 323 NGGDSVNSLSHTKTHVESVDFPGKSCENQSEEFTRHNGEDEASCSEENGGGSNQLRRSCD 382

Query: 377 KSISFGRSMQKGGISMKRFSSGRRKLQWAR-----HYRSQSSVLPL 395
                G +    G S    SS   K   +        +++SSV PL
Sbjct: 383 SGELNGETTGDEGKSQSDISSSTLKTNGSSSSVSCFNKNKSSVFPL 413

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BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 3.8e-24
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 127 GPVLDHHVWFIN-TVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLRLLPK 186
           G    H  W ++   GL +++I+ IT+ KYR+ D  +  +DCS+CLGEF D ESLRLLP+
Sbjct: 116 GQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPR 175

Query: 187 CSHAFHVPCIDTWLRSHKNCPLCRAPV 213
           CSHAFH  CIDTWL+SH NCPLCRA +
Sbjct: 176 CSHAFHQQCIDTWLKSHSNCPLCRANI 202

[Close]

BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 2.7e-22
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 73  LLLLSLITTATLVAAIFMVCLLF--KKFREYRNSRNDRRPVLFDVQRENLSDNDEEGPVL 132
           + +  +  TA L+AA + +   +          S + R  ++ DV      D D      
Sbjct: 63  IAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQD------ 122

Query: 133 DHHVWFINTVGLQQSVIDSITMFKYRKEDK--LIDGSDCSICLGEFQDDESLRLLPKCSH 192
           D      +T GL  ++I  I  FK +K      I+G+DCSICLGEF +DESLRLLPKC+H
Sbjct: 123 DPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 182

Query: 193 AFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQP 232
            FHV CID WL+SH NCPLCRA +           I P T QP
Sbjct: 183 TFHVVCIDRWLKSHSNCPLCRAKI-----------IVPTTQQP 208

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BLAST of Lsi01G007930 vs. ExPASy TrEMBL
Match: A0A0A0KK07 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G499220 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.8e-171
Identity = 325/399 (81.45%), Postives = 346/399 (86.72%), Query Frame = 0


Query: 1   MSCRLKCVR-TLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTS 60
           M C+  C   T +HF+ C+ LCSP+CS  CF LPK PIV LPRP   P P  P P LP+S
Sbjct: 1   MPCQSNCAPITPSHFQVCTLLCSPKCSSICFQLPKAPIVDLPRPP--PPPPLPLPQLPSS 60

Query: 61  SVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQREN 120
            VPPQ+H P R+TLLLLSLITTATLVAAIF++CLLFKKFREYRNSR++R PVLFDVQ EN
Sbjct: 61  IVPPQNHTPERSTLLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRLPVLFDVQAEN 120

Query: 121 LSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDES 180
           L DNDEE PV+DHHVW+INTVGLQQS IDSITMFKYRK++KLIDGSDCSICLGEFQDDES
Sbjct: 121 LPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQDDES 180

Query: 181 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQV 240
           LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+ A P+LAPIEPITNQP  IE  Q 
Sbjct: 181 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPAPIENIQR 240

Query: 241 ETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRSV 300
           ETEAIEEENR DEN GE  SNSGENS IPIK LSRTLSNLTENQN  AV     GIRRSV
Sbjct: 241 ETEAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVEDEGQGIRRSV 300

Query: 301 SMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKS 360
           SMDSVSAMAIYQATAKIQIPEEGCSS+GTL+EVKNSVSSRNLPFPKGG GNQSLYNLVK 
Sbjct: 301 SMDSVSAMAIYQATAKIQIPEEGCSSSGTLMEVKNSVSSRNLPFPKGGIGNQSLYNLVKG 360

Query: 361 ISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           ISFG SMQKGGISMKRFSSGRRKLQWARHYRSQSSVLP+
Sbjct: 361 ISFGCSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPM 397

[Close]

BLAST of Lsi01G007930 vs. ExPASy TrEMBL
Match: A0A5A7T0B5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003050 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 8.1e-163
Identity = 319/402 (79.35%), Postives = 346/402 (86.07%), Query Frame = 0


Query: 1   MSCRLKCVRTL-AHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPL--LP 60
           MSC+  CV T  +HF+ C++LCSP+CSG CF LPKVPIVVLPRPQPRP P PP PL  LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  TSSVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQR 120
           +S VPPQ+H PGR+TLLLLSLITTATLVAAIFM+CLLFKKFREYRNSR++R PVLFDVQ 
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDD 180
           ENL D+DEE PV+DHHVW+INTVGLQQSVIDSITMFKYRK++KLIDGSDCSICLGEFQDD
Sbjct: 121 ENLPDSDEEEPVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQDD 180

Query: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPI-TNQPPIIEE 240
           ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+LAPIEPI  NQP  IE 
Sbjct: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIEN 240

Query: 241 SQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIR 300
           +Q+ETE IEEEN  DEN GE      ENSEI IK LSRTLSNL  NQN  AV     G+R
Sbjct: 241 TQMETETIEEENGVDENSGEV---GRENSEILIKRLSRTLSNL--NQNSEAVEDEGQGLR 300

Query: 301 RSVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNL 360
           RSVSMDSVSAMAIYQ T KIQIPEEGCSSNGTL+EVK+SVSS+NL       GNQSLYNL
Sbjct: 301 RSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKNL-------GNQSLYNL 360

Query: 361 VKSISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           VKSISFG SMQKGGIS+KRFSSGRRKLQWARHYRSQSSVLP+
Sbjct: 361 VKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]

BLAST of Lsi01G007930 vs. ExPASy TrEMBL
Match: A0A1S3B1E6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484949 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 8.1e-163
Identity = 319/402 (79.35%), Postives = 346/402 (86.07%), Query Frame = 0


Query: 1   MSCRLKCVRTL-AHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPL--LP 60
           MSC+  CV T  +HF+ C++LCSP+CSG CF LPKVPIVVLPRPQPRP P PP PL  LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  TSSVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQR 120
           +S VPPQ+H PGR+TLLLLSLITTATLVAAIFM+CLLFKKFREYRNSR++R PVLFDVQ 
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDD 180
           ENL D+DEE PV+DHHVW+INTVGLQQSVIDSITMFKYRK++KLIDGSDCSICLGEFQDD
Sbjct: 121 ENLPDSDEEEPVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQDD 180

Query: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPI-TNQPPIIEE 240
           ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+LAPIEPI  NQP  IE 
Sbjct: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIEN 240

Query: 241 SQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIR 300
           +Q+ETE IEEEN  DEN GE      ENSEI IK LSRTLSNL  NQN  AV     G+R
Sbjct: 241 TQMETETIEEENGVDENSGEV---GRENSEILIKRLSRTLSNL--NQNSEAVEDEGQGLR 300

Query: 301 RSVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNL 360
           RSVSMDSVSAMAIYQ T KIQIPEEGCSSNGTL+EVK+SVSS+NL       GNQSLYNL
Sbjct: 301 RSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKNL-------GNQSLYNL 360

Query: 361 VKSISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           VKSISFG SMQKGGIS+KRFSSGRRKLQWARHYRSQSSVLP+
Sbjct: 361 VKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]

BLAST of Lsi01G007930 vs. ExPASy TrEMBL
Match: A0A6J1GCY1 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453059 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 9.6e-156
Identity = 301/398 (75.63%), Postives = 330/398 (82.91%), Query Frame = 0


Query: 1   MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSS 60
           M C   C+ +  HF+FC TLC+P CS  C               P+P P P  PLLP+S 
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLC--------------SPKPPP-PHLPLLPSSG 60

Query: 61  VPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRENL 120
            PP+ HP G+ TLLLLSLI+TATLV AIFM+CLL KK +EYRNSR +  P LFDV RENL
Sbjct: 61  NPPRPHPSGK-TLLLLSLISTATLVVAIFMLCLLVKKLKEYRNSRQN-GPPLFDVHRENL 120

Query: 121 SDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESL 180
            D+DEEGPVLDHHVW+INTVGLQQS+IDSITMFKYRK++KLI+GSDCSICLGEFQDDESL
Sbjct: 121 PDDDEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESL 180

Query: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVE 240
           RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNL PIEPI NQPP IE++Q+E
Sbjct: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIGNQPPAIEDTQME 240

Query: 241 TEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRSVS 300
           TEA+EEENRG+EN GE  SNSG NSEIPIKGLSRTLS+LTENQ   AV      IRRSVS
Sbjct: 241 TEAVEEENRGNENSGEGGSNSGGNSEIPIKGLSRTLSDLTENQVREAVEDEGQAIRRSVS 300

Query: 301 MDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKSI 360
           MDSVSAMAIYQATAKIQIPEEG SS+G LVEVKNSVSSRN+PFPK G GNQSLYNLVKSI
Sbjct: 301 MDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSI 360

Query: 361 SFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
            FGRS+QKGGISMK  SSGRRK+ WARHYRSQSSVLP+
Sbjct: 361 PFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPM 381

[Close]

BLAST of Lsi01G007930 vs. ExPASy TrEMBL
Match: A0A6J1IL98 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478464 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 3.5e-150
Identity = 295/398 (74.12%), Postives = 321/398 (80.65%), Query Frame = 0


Query: 1   MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSS 60
           M C   C+ +  HF+FC TLC+P CS  C               P+  P P  PLLP+S 
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLC--------------SPKSLP-PHLPLLPSSG 60

Query: 61  VPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRENL 120
            PP+ HP G+ TLLLLSLI+TAT + AIFMVCLL KK +EYRNSR +  P LFDV RENL
Sbjct: 61  NPPRPHPSGK-TLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQN-GPPLFDVHRENL 120

Query: 121 SDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESL 180
            D DEE PVLDHHVW+INTVGLQQS+IDSITMFKYRK++KLI+GSDCSICLGEFQDDESL
Sbjct: 121 PDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESL 180

Query: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVE 240
           RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNL P EPI NQPP IE +Q+E
Sbjct: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQME 240

Query: 241 TEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRSVS 300
           TEA+EEENRGD N GE  SNSG NSEIPIKGLS TLS+LTENQ   AV      IRRSVS
Sbjct: 241 TEAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVS 300

Query: 301 MDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKSI 360
           MDSVSAMAIYQATAKIQIPEEG SS+G LVEVKNSVSSRN+PFPK G GNQSLYNLVKSI
Sbjct: 301 MDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSI 360

Query: 361 SFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
            FGRS+QKGGISMK  SSGRRK+  ARHYRSQSSVLP+
Sbjct: 361 PFGRSVQKGGISMKMLSSGRRKIHSARHYRSQSSVLPM 381

[Close]

BLAST of Lsi01G007930 vs. NCBI nr
Match: XP_038883202.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 615.1 bits (1585), Expect = 5.2e-172
Identity = 331/400 (82.75%), Postives = 346/400 (86.50%), Query Frame = 0


Query: 1   MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSS 60
           MSC  KCV T AHFE CS+LCSP+CSG CF           RPQPRP P  P P LP+S+
Sbjct: 1   MSCIWKCVWTPAHFEICSSLCSPKCSGLCF-----------RPQPRPPPPLPLPQLPSST 60

Query: 61  VPPQSH--PPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRE 120
           VPPQ H   PGRTTLLLLSLITTATLVAAIF+VCLLFKKFRE+RNSRN+RRP+LFDV+ E
Sbjct: 61  VPPQPHSRSPGRTTLLLLSLITTATLVAAIFLVCLLFKKFREHRNSRNNRRPILFDVRGE 120

Query: 121 NLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDE 180
           NL DNDEEGPVLDHHVW+INTVGLQQSVIDSITMFKYRK +KLIDGSDCSICLGEFQDDE
Sbjct: 121 NLPDNDEEGPVLDHHVWYINTVGLQQSVIDSITMFKYRKNEKLIDGSDCSICLGEFQDDE 180

Query: 181 SLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQ 240
           SLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIE IT QP  IEE+Q
Sbjct: 181 SLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIELITTQPAPIEETQ 240

Query: 241 VETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRS 300
           +ETEAIEEENR  EN GE  S+ GENSEI IKGLSRTLSNLTENQN  AV      IRRS
Sbjct: 241 METEAIEEENREVENNGEVGSSGGENSEILIKGLSRTLSNLTENQNGEAVEDEGQAIRRS 300

Query: 301 VSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVK 360
           VSMDSVSAMAIYQATAKIQIPEEGCSSNG +VEVKNS  SRNLPFPKGG GNQSLYNLVK
Sbjct: 301 VSMDSVSAMAIYQATAKIQIPEEGCSSNGPIVEVKNSSCSRNLPFPKGGVGNQSLYNLVK 360

Query: 361 SISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           SISFGR MQK GISMKRFSSGRRKLQWARHYRSQSSVLPL
Sbjct: 361 SISFGRPMQKEGISMKRFSSGRRKLQWARHYRSQSSVLPL 389

[Close]

BLAST of Lsi01G007930 vs. NCBI nr
Match: XP_004143556.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN48727.1 hypothetical protein Csa_002869 [Cucumis sativus])

HSP 1 Score: 611.7 bits (1576), Expect = 5.8e-171
Identity = 325/399 (81.45%), Postives = 346/399 (86.72%), Query Frame = 0


Query: 1   MSCRLKCVR-TLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTS 60
           M C+  C   T +HF+ C+ LCSP+CS  CF LPK PIV LPRP   P P  P P LP+S
Sbjct: 1   MPCQSNCAPITPSHFQVCTLLCSPKCSSICFQLPKAPIVDLPRPP--PPPPLPLPQLPSS 60

Query: 61  SVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQREN 120
            VPPQ+H P R+TLLLLSLITTATLVAAIF++CLLFKKFREYRNSR++R PVLFDVQ EN
Sbjct: 61  IVPPQNHTPERSTLLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRLPVLFDVQAEN 120

Query: 121 LSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDES 180
           L DNDEE PV+DHHVW+INTVGLQQS IDSITMFKYRK++KLIDGSDCSICLGEFQDDES
Sbjct: 121 LPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQDDES 180

Query: 181 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQV 240
           LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+ A P+LAPIEPITNQP  IE  Q 
Sbjct: 181 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPAPIENIQR 240

Query: 241 ETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRSV 300
           ETEAIEEENR DEN GE  SNSGENS IPIK LSRTLSNLTENQN  AV     GIRRSV
Sbjct: 241 ETEAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVEDEGQGIRRSV 300

Query: 301 SMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKS 360
           SMDSVSAMAIYQATAKIQIPEEGCSS+GTL+EVKNSVSSRNLPFPKGG GNQSLYNLVK 
Sbjct: 301 SMDSVSAMAIYQATAKIQIPEEGCSSSGTLMEVKNSVSSRNLPFPKGGIGNQSLYNLVKG 360

Query: 361 ISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           ISFG SMQKGGISMKRFSSGRRKLQWARHYRSQSSVLP+
Sbjct: 361 ISFGCSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPM 397

[Close]

BLAST of Lsi01G007930 vs. NCBI nr
Match: XP_008440570.1 (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0036323.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa] >TYK12717.1 E3 ubiquitin-protein ligase RING1 [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 1.7e-162
Identity = 319/402 (79.35%), Postives = 346/402 (86.07%), Query Frame = 0


Query: 1   MSCRLKCVRTL-AHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPL--LP 60
           MSC+  CV T  +HF+ C++LCSP+CSG CF LPKVPIVVLPRPQPRP P PP PL  LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  TSSVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQR 120
           +S VPPQ+H PGR+TLLLLSLITTATLVAAIFM+CLLFKKFREYRNSR++R PVLFDVQ 
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDD 180
           ENL D+DEE PV+DHHVW+INTVGLQQSVIDSITMFKYRK++KLIDGSDCSICLGEFQDD
Sbjct: 121 ENLPDSDEEEPVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQDD 180

Query: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPI-TNQPPIIEE 240
           ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+LAPIEPI  NQP  IE 
Sbjct: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIEN 240

Query: 241 SQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIR 300
           +Q+ETE IEEEN  DEN GE      ENSEI IK LSRTLSNL  NQN  AV     G+R
Sbjct: 241 TQMETETIEEENGVDENSGEV---GRENSEILIKRLSRTLSNL--NQNSEAVEDEGQGLR 300

Query: 301 RSVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNL 360
           RSVSMDSVSAMAIYQ T KIQIPEEGCSSNGTL+EVK+SVSS+NL       GNQSLYNL
Sbjct: 301 RSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKNL-------GNQSLYNL 360

Query: 361 VKSISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           VKSISFG SMQKGGIS+KRFSSGRRKLQWARHYRSQSSVLP+
Sbjct: 361 VKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]

BLAST of Lsi01G007930 vs. NCBI nr
Match: XP_022949771.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 2.0e-155
Identity = 301/398 (75.63%), Postives = 330/398 (82.91%), Query Frame = 0


Query: 1   MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSS 60
           M C   C+ +  HF+FC TLC+P CS  C               P+P P P  PLLP+S 
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLC--------------SPKPPP-PHLPLLPSSG 60

Query: 61  VPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRENL 120
            PP+ HP G+ TLLLLSLI+TATLV AIFM+CLL KK +EYRNSR +  P LFDV RENL
Sbjct: 61  NPPRPHPSGK-TLLLLSLISTATLVVAIFMLCLLVKKLKEYRNSRQN-GPPLFDVHRENL 120

Query: 121 SDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESL 180
            D+DEEGPVLDHHVW+INTVGLQQS+IDSITMFKYRK++KLI+GSDCSICLGEFQDDESL
Sbjct: 121 PDDDEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESL 180

Query: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVE 240
           RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNL PIEPI NQPP IE++Q+E
Sbjct: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIGNQPPAIEDTQME 240

Query: 241 TEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRRSVS 300
           TEA+EEENRG+EN GE  SNSG NSEIPIKGLSRTLS+LTENQ   AV      IRRSVS
Sbjct: 241 TEAVEEENRGNENSGEGGSNSGGNSEIPIKGLSRTLSDLTENQVREAVEDEGQAIRRSVS 300

Query: 301 MDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVKSI 360
           MDSVSAMAIYQATAKIQIPEEG SS+G LVEVKNSVSSRN+PFPK G GNQSLYNLVKSI
Sbjct: 301 MDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSI 360

Query: 361 SFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
            FGRS+QKGGISMK  SSGRRK+ WARHYRSQSSVLP+
Sbjct: 361 PFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPM 381

[Close]

BLAST of Lsi01G007930 vs. NCBI nr
Match: XP_023544216.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.9 bits (1426), Expect = 1.4e-153
Identity = 301/401 (75.06%), Postives = 329/401 (82.04%), Query Frame = 0


Query: 1   MSCRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSS 60
           M C   C+ +  HF+FC TLC+P CS  C               P+P P P  PLLP+S 
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLC--------------SPKPPP-PHLPLLPSSG 60

Query: 61  VPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFREYRNSRNDRRPVLFDVQRENL 120
            PP+ HP G+ TLLLLSLI+TATLV AIFMVCLL KK +EYRNSR +  P LFDV RENL
Sbjct: 61  NPPRPHPSGK-TLLLLSLISTATLVVAIFMVCLLVKKLKEYRNSRQN-GPPLFDVHRENL 120

Query: 121 SDND---EEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDD 180
            D+D   EEGPVLDHHVW+INTVGLQQS+IDSITMFKYRK++KLI+GSDCSICLGEFQDD
Sbjct: 121 PDDDDDEEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDD 180

Query: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEES 240
           ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNL PIEPI NQPP IE++
Sbjct: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIRNQPPAIEDT 240

Query: 241 QVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAV----MGIRR 300
           Q+ETEA+EEENRG+EN GE  SNSG NSEIPIKGLSRTLS+LTENQ   AV      IRR
Sbjct: 241 QMETEAVEEENRGNENSGEGGSNSGGNSEIPIKGLSRTLSDLTENQIREAVQDEGQAIRR 300

Query: 301 SVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLV 360
           SVSMDSVSAMAIYQATAKIQIPEEG SS+G LVEVKNSVSSRN+PFPK G GNQSLYNLV
Sbjct: 301 SVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLV 360

Query: 361 KSISFGRSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPL 395
           KSI FGRS+QKGGISMK  SS RRK+ WARHYRSQSSVLP+
Sbjct: 361 KSIPFGRSVQKGGISMKMLSSSRRKIHWARHYRSQSSVLPM 384

[Close]

BLAST of Lsi01G007930 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-34
Identity = 100/305 (32.79%), Postives = 154/305 (50.49%), Query Frame = 0


Query: 3   CRLKCVRTLAHFEFCSTLCSPECSGPCFHLPKVPIVVLPRPQPRPQPRPPPPLLPTSSVP 62
           C+  C++ L    +CS+ C  EC   C       IVV+    P                P
Sbjct: 75  CKNNCIQELKTLGYCSSYCLDECPSIC------EIVVISGLSP----------------P 134

Query: 63  PQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKFR-EYRNSRNDRRPVLFDVQRENLS 122
            + H       +L  +I+ ++++  +F++ LL   F+  YR  R+      + ++     
Sbjct: 135 AEIHHDDNLKRIL--IISASSIITTLFLLTLLVLCFKFYYRRRRSITTSRRWSMEEARNW 194

Query: 123 DNDEEGPVL-DHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESL 182
           D D   PV+ DH +W I T+GL  +VI SI + +Y K+D +++G+DCS+CL EF+++E+L
Sbjct: 195 DFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETL 254

Query: 183 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVE 242
           RLLPKC HAFH+ CIDTWLRSH NCPLCRAP++  +          I +    +EE  V 
Sbjct: 255 RLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTM--------IDDHSEGLEEISV- 314

Query: 243 TEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAVMGIRRSVSMDSV 302
              I EEN  D +   E    G             +SN++ +        +RRSVS+DS+
Sbjct: 315 --MIPEENGDDTDEEIEEERDG------------FVSNISRDHGESQQQRVRRSVSLDSL 332

Query: 303 SAMAI 306
           S + +
Sbjct: 375 SGLRV 332

[Close]

BLAST of Lsi01G007930 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 6.6e-32
Identity = 103/255 (40.39%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 46  RPQPRPPPPLLPTSSVPPQSHPPGRTTLLL-LSLITTATLVAAIFMVCLLFKKFREYRN- 105
           R  P PPPP       PP   PP   +LLL  S+    +++  +F+V  L+    + R  
Sbjct: 23  RQYPPPPPP-------PP---PPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRI 82

Query: 106 SRNDRRPVLFDVQRENLSDNDEEGPVLD-HHVWFINTVGLQQSVIDSITMFKYRKEDKLI 165
           S     P   D  ++   D  EE    D HHVW I TVGL +S I+SIT+  ++K + +I
Sbjct: 83  SAASVTP--GDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 142

Query: 166 DGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLA 225
           DG++CS+CL EF++DESLRLLPKCSHAFH+ CIDTWL SHKNCPLCRAPVL  +  P+  
Sbjct: 143 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQ- 202

Query: 226 PIEPITNQPPIIEESQVETEAIEEENRGDENIGEECSNSGENSEIPIKGLSRTLSNLTEN 285
             E  TN  P            + E+  D    ++ S S  N  I    L R  S+L   
Sbjct: 203 --ETETNHQP------------DSESSNDLRGRQDSSRSRRNHNI---FLPRAQSDLANY 247

Query: 286 QNHVAVMGIRRSVSM 298
                V  +RRS S+
Sbjct: 263 CGSGRVENVRRSFSI 247

[Close]

BLAST of Lsi01G007930 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-30
Identity = 81/228 (35.53%), Postives = 117/228 (51.32%), Query Frame = 0


Query: 141 GLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLR 200
           GL +S+I SIT++KYRK D  ++ SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 201 SHKNCPLCRAPVLSNSAAPNLAPIEPITNQPPIIEESQVETE---------AIEEENRGD 260
           SH NCPLCRA ++++SA      I  +TNQ  + E + + T           +E     +
Sbjct: 193 SHSNCPLCRAFIVTSSA----VEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRN 252

Query: 261 ENIGEECSNSGENSEIPIKGLSRTLSNLTENQNHVAVMGIRRSVSMDSVSAMA-----IY 320
           E + E  +      +    G  R  ++L      V++  I R +  D  SA       + 
Sbjct: 253 ETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSIADILREIEDDEESAGVGTSRWVE 312

Query: 321 QATAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLVK 355
           +   +   P  G ++N T       V S      + G+     Y L K
Sbjct: 313 EGEGEKTPPPSGSAANQTNGISNFLVRSSMAAMKRSGYDRAKNYRLPK 356

[Close]

BLAST of Lsi01G007930 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-29
Identity = 125/406 (30.79%), Postives = 189/406 (46.55%), Query Frame = 0


Query: 17  CST-LCSPECSGPCFHLPKVPIV--VLPRPQPRPQPRP-PPPLLPTSSVPPQSHPPGRTT 76
           CS  +C P C   C+  P    +   LP     PQP P P P +    +P Q      ++
Sbjct: 23  CSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQD---SSSS 82

Query: 77  LLLLSLITTATLVAAIFMV--CLLFKKFRE---------YRNSRNDRRPVLFDVQRENLS 136
           L  +S+IT    V AI +    L+ K F +         Y++   D   V+     E   
Sbjct: 83  LDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVM----EEEFQ 142

Query: 137 DNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSDCSICLGEFQDDESLR 196
           D ++    +DH +W I T GLQQS+I+SIT+  Y++ D LI+ +DC +CL EF++DESLR
Sbjct: 143 DREQ----VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLR 202

Query: 197 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPV--LSNSAAPNLAPIEPITNQPPIIEESQV 256
           LLPKC+HAFH+ CIDTWL SH NCPLCRA +  +S +      P+E      P    S +
Sbjct: 203 LLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVE----VTPGGSGSHL 262

Query: 257 ETEAIEEENRGD-ENIGEECSNSGENSEIPIKGL---SRTLSNLTENQNHVAVM-GIRRS 316
           E + ++EE+ G+ EN  +      ++S+I I+     S    + TE +  V V+      
Sbjct: 263 ENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERVRVLKECMDP 322

Query: 317 VSMDSVSAMAIYQA-TAKIQIPEEGCSSNGTLVEVKNSVSSRNLPFPKGGFGNQSLYNLV 376
              DSV++++  +     +  P + C +        N     +     GG  NQ   +  
Sbjct: 323 NGGDSVNSLSHTKTHVESVDFPGKSCENQSEEFTRHNGEDEASCSEENGGGSNQLRRSCD 382

Query: 377 KSISFGRSMQKGGISMKRFSSGRRKLQWAR-----HYRSQSSVLPL 395
                G +    G S    SS   K   +        +++SSV PL
Sbjct: 383 SGELNGETTGDEGKSQSDISSSTLKTNGSSSSVSCFNKNKSSVFPL 413

[Close]

BLAST of Lsi01G007930 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-23
Identity = 107/346 (30.92%), Postives = 160/346 (46.24%), Query Frame = 0


Query: 49  PRPPPPLLPTSSVPPQSHPPGRTTLLLLSLITTATLVAAIFMVCLLFKKF--REYRNSRN 108
           P PPP           S       + L+ ++T+A ++ + +    L  K+  R ++ S +
Sbjct: 35  PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYY---TLISKYCHRHHQTSSS 94

Query: 109 DRRPVLFDVQRENLSDNDEEGPVLDHHVWFINTVGLQQSVIDSITMFKYRKEDKLIDGSD 168
           +           NL+ N  EG          N  GL +S+I SIT++KY+  D  +DGSD
Sbjct: 95  ETL---------NLNHNG-EGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSD 154

Query: 169 CSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVL-----SNSAAPNL 228
           CS+CL EF+++ESLRLLPKC+HAFH+PCIDTWL+SH NCPLCRA V      + S   N+
Sbjct: 155 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNV 214

Query: 229 APIEPITNQPPIIEESQVETEAIEEENRGDENIGEECSNSGENSEIPIKGL--------S 288
           + +  + NQ      S  +T ++ E N      G E      +S + I+ L        +
Sbjct: 215 SVV--VANQ----SNSAHQTGSVSEINL--NLAGYESQTGDFDSVVVIEDLEIGSRNSDA 274

Query: 289 RTLSNLTENQNHVA---VMGIRRSVSMDSVSAMAIYQATAKIQIPEEGCSSNGTLVEVKN 348
           R+   L E +        + IRRSVS++S   ++I     +I+  E      GT    + 
Sbjct: 275 RSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIEDEEGESGGVGTSQRREE 334

Query: 349 SVSSRNLPFPKGGFGNQSLYNLVKSISFGRSMQKGGISMKRFSSGR 377
                    P     NQ    +  S  F RS+  G     R+  GR
Sbjct: 335 GEDGDGKTIPPTE-ANQRSGGV--SGFFVRSLSTGRFIFSRYDRGR 356

The following BLAST results are available for this feature:

BLAST of Lsi01G007930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX93	9.3e-31	40.39	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q9SRQ8	5.1e-29	35.53	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q8LFY8	3.3e-28	30.79	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q7XLY8	3.8e-24	56.32	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
P0C041	2.7e-22	39.26	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]

BLAST of Lsi01G007930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK07	2.8e-171	81.45	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G499220 PE...	[more]
A0A5A7T0B5	8.1e-163	79.35	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B1E6	8.1e-163	79.35	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484949 PE=3 ...	[more]
A0A6J1GCY1	9.6e-156	75.63	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453059...	[more]
A0A6J1IL98	3.5e-150	74.12	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478464 P...	[more]

BLAST of Lsi01G007930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883202.1	5.2e-172	82.75	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]
XP_004143556.1	5.8e-171	81.45	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN48727.1 hypothetical pro...	[more]
XP_008440570.1	1.7e-162	79.35	PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo] >KAA0036323.1 E3 ubi...	[more]
XP_022949771.1	2.0e-155	75.63	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023544216.1	1.4e-153	75.06	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G007930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	1.1e-34	32.79	RING/U-box superfamily protein	[more]
AT5G10380.1	6.6e-32	40.39	RING/U-box superfamily protein	[more]
AT3G03550.1	3.6e-30	35.53	RING/U-box superfamily protein	[more]
AT1G72220.1	2.3e-29	30.79	RING/U-box superfamily protein	[more]
AT5G17600.1	3.3e-23	30.92	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 167..208 e-value: 1.5E-7 score: 41.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 166..209 e-value: 7.2E-14 score: 51.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 167..209 score: 12.754832
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 163..216 e-value: 0.0084 score: -1.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..265
None	No IPR available	PANTHER	PTHR45676:SF126	RING-H2 FINGER PROTEIN ATL54	coord: 14..379
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 166..209 e-value: 2.08025E-16 score: 70.7937
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 147..215
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 141..217 e-value: 3.2E-23 score: 82.7
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..379

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G007930.1	Lsi01G007930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane