Lsi01G007570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G007570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SCO1 homolog 2, mitochondrial
Location	chr01: 5939475 .. 5942075 (-)
RNA-Seq Expression	Lsi01G007570
Synteny	Lsi01G007570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGTGATTATATTGCATTGGATTTGGGATCGTATGGAGTTAAGTGATCACGAATCCCATTTCTTCTAATGTTAAACAATGGCATGTAGCTGATAATCGGGTAACTTCCAATACAGTTGTTTGTTATATAGATATTCATTGCTTACTAAGAGAACTTTGCTGTCAACTTGGTTAATTTTGATGTAGGTTACATCCATCAATTAGCGTTCGGTCCTGCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGATGTCCGCCCTGTTCTTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTGTATGACCTGGCCCTCATCTTTTAGATTCAAGTTTTCCTTGTTGGGTAAATACAATTTTGTGATGACATTCGTTTGGCCTTATTTTATGTTCCTTTACTTTACATTACTATTATAAATTAATCATCATAATACCTTTTTCAACTTCTCTATTTTACTGTTATTATTATTATTTTTGTGCAGCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGTTATTATCTTTGTGATCTTCTATTTAATTCTGGCTACCATTGTTAATTAGTTGCACTGGAAATTAGTTTCTTTGCACTGCAAATTAGTTTCAGTAGTTTATTGTCTATATTAAGATTTAAGAAAGAAAATATGGCACTAATAGTCCTGTTAGGAACTTAGGACTTGGGATGACCTCAAGAAACCGTAAATAGCTGTGCAATCATCCAGTAGTTGTTCTGGATTTCCTTGACTCCTCTATGCTCAGGGTAGAGATATAAGGAAGTAGAAGATGGAAAAAGCTTGGATGGCCTGAATCTCCACTTCTTTATATGTGGACTATGAAAATGTTTAGATTTGTGCGCATGAGCAGGCCATTATATGCATATCGTACTTGCATAATCTGATTATCTCTAAACTATACTCGGAAGTTATGGGCTGTTACAATTCATGATATGCATGGCAGTGGTTAACTTGTTGAAATTAGTGTTGTAATACTGTATGATCAAGTTTATGCTCTGAAGATTTTTGTATGCACGAGACTTTTAATAAGCTTGAGGCAGCAGATAGTATAATTTTTGGATTGATTTTAGGGGCCATATTTTAATGCTTCAGATTTATAGACAACTAAAGTGTCTTCTTCCACTCAGGACAGGGAAACACATCTGCAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTGTTGATACAGAGAAAAGAGTTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTCATCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGGTATTTGACAACTTCAAGAAATGTAGCATCTGCATTATCCGTCTATATGGTGTTGGCATTTACTTCCGCCCTTGTTTTAATTATTTGTTTATTGTTCTGTGAATAAGAATCTGGACATAACCACAAGGTACTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCGTCTCATCTTCATGCTTACCTTAAAGGTCAGTCTTTTCCTCTTCCTGAAGATACATATTGTTAAGATAAAAATATTTTGGTGGACGTTTCTCTTATTTTTCCCATCTTCTATGGACTGCAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATATCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATCGATTCTTCACACAAAATGTAAGCCAGCTGAGACCGTTGAATCTATGTTTCATAATACGACTTGAGTAATAATGTATGTATGATGGGGAAAAACGATCAGGTATTTGTTGAGTCCAAACCTAGAGGTTCTGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATGTACTTCAGAAAACTCCTCAATAACAACCTACAGGTCTTCAAGTTCTCTCCTTTGCATTCCTATTTGTTCTAAGTTTCTTTCTAGTCATCCAGTGAAAGCATTCGAGATGTTGGCTTGACTTTATTACTTGAATTTCAACCCTTTAGAAGTCCATTAGTAGTATAATACTGTAAACCGAAAAGGCAATTTTTTTTTTTTCAACAATTGTTTCAACTTTATAACTTGGGTTGGGATGAATAGTATAGCATCACCATAATCCGTTGAACTCCCCAACTTGCTTGCTTCAATTATTTGATAAAGTTTTATTCGGCTTGGATGAGATGCAAAAGCTACATAACATTTCAGAGAAAGATGTAAACAAAGCTTTCATCTTCTGTCCCCTATAAATGTGCACACCATATCACGAACATAAAGGAGGAATAACACACAGGAAGGGCATGTTGTCCAAAATTACTTTGTCATTTCCAAAATCACTGCTATTTTAAAACAGGTTGATTATAATTCAATGAATTACAGATGGTGATTGACTGCAGACTTGAACCTCTTTTTTCTGTTCTTTCTCTGCAATATAAAATAGAGGGGCAATCACTACCCTCTCAGAC

mRNA sequence

ATGAAATGTGATTATATTGCATTGGATTTGGGATCGTTACATCCATCAATTAGCGTTCGGTCCTGCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGATGTCCGCCCTGTTCTTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGACAGGGAAACACATCTGCAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTGTTGATACAGAGAAAAGAGTTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTCATCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGAATCTGGACATAACCACAAGGTACTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCGTCTCATCTTCATGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATATCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATCGATTCTTCACACAAAATGTATTTGTTGAGTCCAAACCTAGAGGTTCTGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATGTACTTCAGAAAACTCCTCAATAACAACCTACAGGTCTTCAAGTTCTCTCCTTTGCATTCCTATTTGTTCTAAGTTTCTTTCTAGTCATCCAGTGAAAGCATTCGAGATGTTGGCTTGACTTTATTACTTGAATTTCAACCCTTTAGAAGTCCATTAGTAGTATAATACTGTAAACCGAAAAGGCAATTTTTTTTTTTTCAACAATTGTTTCAACTTTATAACTTGGGTTGGGATGAATAGTATAGCATCACCATAATCCGTTGAACTCCCCAACTTGCTTGCTTCAATTATTTGATAAAGTTTTATTCGGCTTGGATGAGATGCAAAAGCTACATAACATTTCAGAGAAAGATGTAAACAAAGCTTTCATCTTCTGTCCCCTATAAATGTGCACACCATATCACGAACATAAAGGAGGAATAACACACAGGAAGGGCATGTTGTCCAAAATTACTTTGTCATTTCCAAAATCACTGCTATTTTAAAACAGGTTGATTATAATTCAATGAATTACAGATGGTGATTGACTGCAGACTTGAACCTCTTTTTTCTGTTCTTTCTCTGCAATATAAAATAGAGGGGCAATCACTACCCTCTCAGAC

Coding sequence (CDS)

ATGAAATGTGATTATATTGCATTGGATTTGGGATCGTTACATCCATCAATTAGCGTTCGGTCCTGCAAATATTCCACATCATCAAAATACAGTAAGGAAAAACCAGATGTCCGCCCTGTTCTTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGACAGGGAAACACATCTGCAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTGTTGATACAGAGAAAAGAGTTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGCTACACTTCATCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGAATCTGGACATAACCACAAGGTACTACCTGTATTTGTGACAATTGATCCACAACGGGATAACCCGTCTCATCTTCATGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATATCGTGTTTACTTTAAGAAGGTTGAAGAGGAAGGCAATGATTATCTTATCGATTCTTCACACAAAATGTATTTGTTGAGTCCAAACCTAGAGGTTCTGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCAGAAGCCATACTGAATGTACTTCAGAAAACTCCTCAATAA

Protein sequence

MKCDYIALDLGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAILNVLQKTPQ

Homology

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BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot
Match: Q8LAL0 (Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 8.2e-84
Identity = 147/253 (58.10%), Postives = 186/253 (73.52%), Query Frame = 0


Query: 15  PSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHT---SRSWATYIIPAAVMGFVGLAAFVH 74
           PS  ++S  Y  S++   E PDV+P+      T   SRS A Y +PA ++GF G   F+H
Sbjct: 24  PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLH 83

Query: 75  YNDERRAVLKGQGNT-------SANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYF 134
           YNDERRAV +GQ ++       S   VKGP+IGGPF LV TE ++VTE D  G W LLYF
Sbjct: 84  YNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIVTENDFCGKWVLLYF 143

Query: 135 GYTSSPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRII 194
           GY+ SPDV PEQL++MSKA+D LES HN K+LPVFVT+DPQRD PSHLHAYLKEFD RI+
Sbjct: 144 GYSFSPDVGPEQLKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPSHLHAYLKEFDSRIL 203

Query: 195 GLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEEL 254
           GLTG  +A+RQMAQEYRVYFKKV+E+G DYL+D+SH MYL++P +E++RCFG+EYN +EL
Sbjct: 204 GLTGTASAMRQMAQEYRVYFKKVQEDGEDYLVDTSHNMYLINPKMEIVRCFGVEYNPDEL 263

Query: 255 SEAILNVLQKTPQ 258
           S+ +L  +    Q
Sbjct: 264 SQELLKEVASVSQ 276

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BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot
Match: Q8VYP0 (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 75/210 (35.71%), Postives = 131/210 (62.38%), Query Frame = 0


Query: 50  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTSANVVKGP-----VIGGPFALVD 109
           SW ++ +  A     G     +Y+ +++  ++     S  V +GP      IGGPF+L+ 
Sbjct: 126 SWMSFFLLFA----TGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLIR 185

Query: 110 TEKRVVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDP 169
            + + VTEK+L G WT+LYFG+T  PD+ P++L  ++ AID ++      V+PVF+++DP
Sbjct: 186 DDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVDP 245

Query: 170 QRDNPSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYL 229
           +RD    +H Y+KEF P++IGLTG    ++ +A+ YRVY+ K EEE +DYL+D S  MYL
Sbjct: 246 ERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMYL 305

Query: 230 LSPNLEVLRCFGIEYNAEELSEAILNVLQK 255
           +SP +  ++ +G  ++ + L++ ++  +++
Sbjct: 306 MSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

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BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot
Match: O42899 (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sco1 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35
Identity = 75/220 (34.09%), Postives = 127/220 (57.73%), Query Frame = 0


Query: 36  DVRPVLSVD--AHTSRSWATYIIPAAVM--GFVGLAAFVHYNDERRAVLKGQGNTSANVV 95
           D R  L+ D    T +SW   I   A++      +  + ++  E++ VL+ Q +     +
Sbjct: 33  DGRKNLATDNRTQTYQSWRGMISIRALLLAAATSVGLYAYFQHEKKKVLERQNDKVLATI 92

Query: 96  KGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGH 155
             P +GG F+L+D     VT+ D +G ++L+YFG+T  PD+ P++L  MS AIDI+ +  
Sbjct: 93  GRPQLGGAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVV 152

Query: 156 NHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYF---KKVE 215
              V P+F+T DP RD P  +  YL++F+P+I+GLTG    ++ + +++RVYF   K ++
Sbjct: 153 GDVVYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNID 212

Query: 216 EEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAI 249
            + +DYL+D S   YL+ P  + +  FG    +E+L+ AI
Sbjct: 213 PKKDDYLVDHSVFFYLMDPEGKFIEVFGRNSTSEDLARAI 252

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BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot
Match: A1A4J8 (Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30
Identity = 70/201 (34.83%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 50  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRV 109
           SW +  +  A+ G + LA   ++  E+   L+ + + S   +  P++GGPF+L       
Sbjct: 98  SWKSLAVTFAIGGAL-LAGMKYFKKEKTEKLEKERHRS---IGKPLLGGPFSLTTHTGEP 157

Query: 110 VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGHN-HKVLPVFVTIDPQRDN 169
            T+KD  G W L+YFG+T  PD+ PE+L+ M + +D ++S      + P+F+TIDP+RD 
Sbjct: 158 KTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIDSIPTLPNLTPLFITIDPERDT 217

Query: 170 PSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKK-VEEEGNDYLIDSSHKMYLLSP 229
              +  Y+KEF P++IGLTG    + Q+A+ +RVY+    ++E  DY++D +  MYL+ P
Sbjct: 218 KEAIANYVKEFSPKLIGLTGTKEEIDQVARAFRVYYSPGPKDEDEDYIVDHTIIMYLIGP 277

Query: 230 NLEVLRCFGIEYNAEELSEAI 249
           + E L  FG      E++ +I
Sbjct: 278 DGEFLDYFGQNKKNAEIAGSI 294

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BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot
Match: Q5SUC9 (Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30
Identity = 69/201 (34.33%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 50  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRV 109
           SW +  +  A+ G + LA   ++  E+   L+ Q + S   +  P++GGPF+L       
Sbjct: 77  SWKSLALTFAIGGSL-LAGMKYFKKEKIEKLEKQRHRS---IGKPLLGGPFSLTTHNGEP 136

Query: 110 VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGHN-HKVLPVFVTIDPQRDN 169
            T+KD  G W L+YFG+T  PD+ PE+L+ M + ++ ++S  +   + P+F+TIDP+RD 
Sbjct: 137 KTDKDYLGQWVLIYFGFTHCPDICPEELEKMIEVVEEIDSIPSLPNLTPLFITIDPERDT 196

Query: 170 PSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKK-VEEEGNDYLIDSSHKMYLLSP 229
              +  Y+KEF P+++GLTG    +  +A+ YRVY+    ++E  DY++D +  MYL+ P
Sbjct: 197 KEAIATYVKEFSPKLVGLTGTKEEIDGVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP 256

Query: 230 NLEVLRCFGIEYNAEELSEAI 249
           + E L  FG      E++ +I
Sbjct: 257 DGEFLDYFGQNKKKAEIAGSI 273

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BLAST of Lsi01G007570 vs. ExPASy TrEMBL
Match: A0A6J1ITF2 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478493 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC+YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LQRLHPSISVRSCRYSTTSKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVVKGPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKA++ILES H+ KV PVFVTIDPQRDNPSHL AYLKEFDPRIIGLTGP
Sbjct: 142 PDVVPEQLQIMSKALNILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGP 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

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BLAST of Lsi01G007570 vs. ExPASy TrEMBL
Match: A0A6J1GCL0 (protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452949 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC+YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVVKGPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKAI+ILES H+ KV PVFVTIDPQRDNPSHL AYLKEFDPR+IGLTGP
Sbjct: 142 PDVVPEQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLCAYLKEFDPRLIGLTGP 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

[Close]

BLAST of Lsi01G007570 vs. ExPASy TrEMBL
Match: A0A1S3B131 (protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.8e-124
Identity = 220/245 (89.80%), Postives = 232/245 (94.69%), Query Frame = 0


Query: 13  LHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAFVHY 72
           LHPSISV SCKYSTSSKYSKE+P+V  +LSVD HTS SW TYIIPAAVMGFVGLAAFVHY
Sbjct: 25  LHPSISVLSCKYSTSSKYSKERPEVHSILSVDGHTSSSWTTYIIPAAVMGFVGLAAFVHY 84

Query: 73  NDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSSPDV 132
           NDERRAVLKGQGNT  N+VKGPVIGGPF+L+DTEKR VTEKDLRGNWTLLYFGYTSSPDV
Sbjct: 85  NDERRAVLKGQGNTCVNIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDV 144

Query: 133 VPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGPVAA 192
           VPEQLQIMSKAIDILES H+ KVLP+FVTIDPQRDNPSHL AYLKEFD RIIGLTGPVAA
Sbjct: 145 VPEQLQIMSKAIDILESKHSLKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAA 204

Query: 193 VRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAILNVL 252
           VRQMAQEYRVYFKKVEEEGNDYLID+SHKMYLLSPNLEVLRCFG+EYNAEE+S+AILNVL
Sbjct: 205 VRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVL 264

Query: 253 QKTPQ 258
           QKTPQ
Sbjct: 265 QKTPQ 269

[Close]

BLAST of Lsi01G007570 vs. ExPASy TrEMBL
Match: A0A0A0KIW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.0e-122
Identity = 219/245 (89.39%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 13  LHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAFVHY 72
           LHPSISV SCK STSSKYSKE+P+V P+LS D HTS SW TYIIPAAVMGFVGLAAFVHY
Sbjct: 25  LHPSISVLSCKCSTSSKYSKERPEV-PLLSADGHTSSSWTTYIIPAAVMGFVGLAAFVHY 84

Query: 73  NDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSSPDV 132
           NDERRAVLKGQGNT  N+VKGPVIGGPF+L+DTEKR VTEKDLRGNWTLLYFGYTSSPDV
Sbjct: 85  NDERRAVLKGQGNTCENIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDV 144

Query: 133 VPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGPVAA 192
           VPEQLQIMSKAIDILES H  KVLP+FVTIDPQRDNPSHL AYLKEFD RIIGLTGPVAA
Sbjct: 145 VPEQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAA 204

Query: 193 VRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAILNVL 252
           VRQMAQEYRVYFKKVEEEGNDYLID+SHKMYLLSPNLEVLRCFG+EYNAEE+S+AILNVL
Sbjct: 205 VRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVL 264

Query: 253 QKTPQ 258
           QKTPQ
Sbjct: 265 QKTPQ 268

[Close]

BLAST of Lsi01G007570 vs. ExPASy TrEMBL
Match: A0A6J1BW99 (protein SCO1 homolog 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005302 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.6e-114
Identity = 207/249 (83.13%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L   HPS SVRSCKYS SSKY+KE P+V P++S+D   SRS ATY+IPAAVM FVGLAA 
Sbjct: 22  LQRFHPSNSVRSCKYSKSSKYNKEIPEVHPLISIDEQASRSRATYVIPAAVMSFVGLAAL 81

Query: 70  VHYNDERRAVLKGQGNTS-ANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTS 129
           VHYNDERRAVLKGQGN+S  N+V+GP+IGGPF L DTE RVVTE++LRGNW+LLYFGYTS
Sbjct: 82  VHYNDERRAVLKGQGNSSDGNLVRGPIIGGPFTLTDTENRVVTEQNLRGNWSLLYFGYTS 141

Query: 130 SPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTG 189
           SPDVVPEQLQIMSKAIDILES HN KVLPVFVTIDPQRDNPSHL AYLKEFDPRI+GL G
Sbjct: 142 SPDVVPEQLQIMSKAIDILESRHNLKVLPVFVTIDPQRDNPSHLRAYLKEFDPRIVGLAG 201

Query: 190 PVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAI 249
           PVAAVRQMAQEYRVYFKKVEEEG DYLI+SSHKMYLLSPNLEV+RC GIEYNAEELS+AI
Sbjct: 202 PVAAVRQMAQEYRVYFKKVEEEGGDYLIESSHKMYLLSPNLEVMRCCGIEYNAEELSQAI 261

Query: 250 LNVLQKTPQ 258
           LNV+QKTPQ
Sbjct: 262 LNVVQKTPQ 270

[Close]

BLAST of Lsi01G007570 vs. NCBI nr
Match: XP_022978543.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-125
Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC+YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LQRLHPSISVRSCRYSTTSKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVVKGPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKA++ILES H+ KV PVFVTIDPQRDNPSHL AYLKEFDPRIIGLTGP
Sbjct: 142 PDVVPEQLQIMSKALNILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGP 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

[Close]

BLAST of Lsi01G007570 vs. NCBI nr
Match: KAG6604025.1 (Protein SCO1-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034189.1 Protein SCO1-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 222/246 (90.24%), Postives = 236/246 (95.93%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC+YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVVKGPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKAI+ILES HN KV PVFVTIDPQRDNPSHL AYLKEFDPRIIGLTG 
Sbjct: 142 PDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGQ 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

[Close]

BLAST of Lsi01G007570 vs. NCBI nr
Match: XP_038881278.1 (protein SCO1 homolog 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-125
Identity = 222/247 (89.88%), Postives = 234/247 (94.74%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHP ISVRSCKYS+SSKYSKE+P++  +LSVDAHTS SWATYIIPAAVMGFVGLAAF
Sbjct: 19  LQRLHPLISVRSCKYSSSSKYSKERPEIHHLLSVDAHTSPSWATYIIPAAVMGFVGLAAF 78

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQGNTS NVVKGPVIGGPF+L+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 79  VHYNDERRAVLKGQGNTSVNVVKGPVIGGPFSLIDTEKRIVTEKDLRGNWTLLYFGYTSS 138

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQI+SKAIDILES HN KVLPVF TIDPQRDNPSHL AYLKEFDPRIIGLTGP
Sbjct: 139 PDVVPEQLQIISKAIDILESRHNLKVLPVFATIDPQRDNPSHLRAYLKEFDPRIIGLTGP 198

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAE+L +AIL
Sbjct: 199 VAAVRQMAQEYRVYFKKIEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEDLPQAIL 258

Query: 250 NVLQKTP 257
           N LQKTP
Sbjct: 259 NALQKTP 265

[Close]

BLAST of Lsi01G007570 vs. NCBI nr
Match: XP_022949607.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-125
Identity = 221/246 (89.84%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC+YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVVKGPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKAI+ILES H+ KV PVFVTIDPQRDNPSHL AYLKEFDPR+IGLTGP
Sbjct: 142 PDVVPEQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLCAYLKEFDPRLIGLTGP 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

[Close]

BLAST of Lsi01G007570 vs. NCBI nr
Match: XP_023544547.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544548.1 protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 221/246 (89.84%), Postives = 236/246 (95.93%), Query Frame = 0


Query: 10  LGSLHPSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHTSRSWATYIIPAAVMGFVGLAAF 69
           L  LHPSISVRSC YST+SKY+KE+P+V PV+SVDAHTSRSWATYIIPAAVMGFVGLAAF
Sbjct: 22  LQRLHPSISVRSCGYSTASKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAF 81

Query: 70  VHYNDERRAVLKGQGNTSANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYFGYTSS 129
           VHYNDERRAVLKGQG+TS NVV+GPVIGGPFAL+DTEKR+VTEKDLRGNWTLLYFGYTSS
Sbjct: 82  VHYNDERRAVLKGQGSTSVNVVQGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSS 141

Query: 130 PDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRIIGLTGP 189
           PDVVPEQLQIMSKAI+ILES H+ KV PVFVTIDPQRDNPSHL AYLKEFDPRIIGLTGP
Sbjct: 142 PDVVPEQLQIMSKAINILESRHSVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGP 201

Query: 190 VAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEELSEAIL 249
           VAAVRQMAQEYRVYFKK+EE+GNDYLIDSSHKMYLLSPNLEV+RCFGIEYNAEELS+AIL
Sbjct: 202 VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAIL 261

Query: 250 NVLQKT 256
           N LQKT
Sbjct: 262 NALQKT 267

[Close]

BLAST of Lsi01G007570 vs. TAIR 10
Match: AT4G39740.1 (Thioredoxin superfamily protein )

HSP 1 Score: 311.6 bits (797), Expect = 5.8e-85
Identity = 147/253 (58.10%), Postives = 186/253 (73.52%), Query Frame = 0


Query: 15  PSISVRSCKYSTSSKYSKEKPDVRPVLSVDAHT---SRSWATYIIPAAVMGFVGLAAFVH 74
           PS  ++S  Y  S++   E PDV+P+      T   SRS A Y +PA ++GF G   F+H
Sbjct: 24  PSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLGFAGFVGFLH 83

Query: 75  YNDERRAVLKGQGNT-------SANVVKGPVIGGPFALVDTEKRVVTEKDLRGNWTLLYF 134
           YNDERRAV +GQ ++       S   VKGP+IGGPF LV TE ++VTE D  G W LLYF
Sbjct: 84  YNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIVTENDFCGKWVLLYF 143

Query: 135 GYTSSPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDPQRDNPSHLHAYLKEFDPRII 194
           GY+ SPDV PEQL++MSKA+D LES HN K+LPVFVT+DPQRD PSHLHAYLKEFD RI+
Sbjct: 144 GYSFSPDVGPEQLKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPSHLHAYLKEFDSRIL 203

Query: 195 GLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYLLSPNLEVLRCFGIEYNAEEL 254
           GLTG  +A+RQMAQEYRVYFKKV+E+G DYL+D+SH MYL++P +E++RCFG+EYN +EL
Sbjct: 204 GLTGTASAMRQMAQEYRVYFKKVQEDGEDYLVDTSHNMYLINPKMEIVRCFGVEYNPDEL 263

Query: 255 SEAILNVLQKTPQ 258
           S+ +L  +    Q
Sbjct: 264 SQELLKEVASVSQ 276

[Close]

BLAST of Lsi01G007570 vs. TAIR 10
Match: AT3G08950.1 (electron transport SCO1/SenC family protein )

HSP 1 Score: 168.3 bits (425), Expect = 8.0e-42
Identity = 75/210 (35.71%), Postives = 131/210 (62.38%), Query Frame = 0


Query: 50  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTSANVVKGP-----VIGGPFALVD 109
           SW ++ +  A     G     +Y+ +++  ++     S  V +GP      IGGPF+L+ 
Sbjct: 126 SWMSFFLLFA----TGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLIR 185

Query: 110 TEKRVVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESGHNHKVLPVFVTIDP 169
            + + VTEK+L G WT+LYFG+T  PD+ P++L  ++ AID ++      V+PVF+++DP
Sbjct: 186 DDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVDP 245

Query: 170 QRDNPSHLHAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDSSHKMYL 229
           +RD    +H Y+KEF P++IGLTG    ++ +A+ YRVY+ K EEE +DYL+D S  MYL
Sbjct: 246 ERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMYL 305

Query: 230 LSPNLEVLRCFGIEYNAEELSEAILNVLQK 255
           +SP +  ++ +G  ++ + L++ ++  +++
Sbjct: 306 MSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

The following BLAST results are available for this feature:

BLAST of Lsi01G007570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAL0	8.2e-84	58.10	Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE...	[more]
Q8VYP0	1.1e-40	35.71	Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE...	[more]
O42899	1.9e-35	34.09	Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]
A1A4J8	1.4e-30	34.83	Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1	[more]
Q5SUC9	3.1e-30	34.33	Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1	[more]

BLAST of Lsi01G007570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITF2	1.2e-125	89.84	protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GCL0	2.6e-125	89.84	protein SCO1 homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3B131	3.8e-124	89.80	protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE...	[more]
A0A0A0KIW8	6.0e-122	89.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=3 SV=1	[more]
A0A6J1BW99	1.6e-114	83.13	protein SCO1 homolog 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Lsi01G007570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978543.1	2.4e-125	89.84	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima]	[more]
KAG6604025.1	3.2e-125	90.24	Protein SCO1-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_038881278.1	5.4e-125	89.88	protein SCO1 homolog 2, mitochondrial [Benincasa hispida]	[more]
XP_022949607.1	5.4e-125	89.84	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_023544547.1	1.2e-124	89.84	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >X...	[more]

BLAST of Lsi01G007570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39740.1	5.8e-85	58.10	Thioredoxin superfamily protein	[more]
AT3G08950.1	8.0e-42	35.71	electron transport SCO1/SenC family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 80..255 e-value: 4.3E-48 score: 165.2
None	No IPR available	PANTHER	PTHR12151:SF1	PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL	coord: 13..255
IPR003782	Copper chaperone SCO1/SenC	PFAM	PF02630	SCO1-SenC	coord: 97..229 e-value: 1.9E-42 score: 144.4
IPR003782	Copper chaperone SCO1/SenC	PANTHER	PTHR12151	ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER	coord: 13..255
IPR003782	Copper chaperone SCO1/SenC	CDD	cd02968	SCO	coord: 96..236 e-value: 1.2796E-59 score: 183.573
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 94..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G007570.1	Lsi01G007570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion