Lsi01G007560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G007560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLAT domain-containing protein
Location	chr01: 5936578 .. 5937756 (+)
RNA-Seq Expression	Lsi01G007560
Synteny	Lsi01G007560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTCTATATAACATCAAGAAGAAGAAAATAACTCCACATTCCACAACACAGCTATGGCTTCCAAATCTACCCTCTTCCTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATGTATTTTTTACTAACTCTGTTTTTTCCTCTGTCTTTGTATCTGGAATTATATATATAAAAAAATAAAATTTGACTGATACATATTTTGGATTTGGTTGATGCAGGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGATTCGGTGATTACCGTCACGCTTTACACGGAGGAGGGGGACGGAATCCGGATTAAGGATCTGGAGAAATGGGGCGGGTTGATGGGAGCCGACTACAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGCCCATGCCTGAGCGGACCGGTGTGTTCATTGAATCTGACCTCCGATGGATCGGGTCCACACCATGGGTGGTACTGCAACTATGTTGAGGTGACGACGACGGGCGTCCACAGGTCGTGTGACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTGGATACGTCGCCGTATAATCTGACCGCCATCCGGGATAACTGCTCCAGTGGGAGTGGAAGCCGGCGTGATTTGATCCGGTCGGGTGAGCCGAATTTGAAATTGAAGCAGGTGGTATGAATATTAGGGATTGTATGATGTAATGTAATAAAAATGTTGTAGAATAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTAGCTGGAATTAATTGAAATGGGAGAGTGTTTTTTTCTGGAGTTGCGTAATTGGTAAGTTGGGAGAGGAGTAATAGTTAAATGGAGAGCAGTGTGTTGTGTTTAGCTGATCTACTTTTTGATCCGATCTTGTTCGTCAGGAATCATGAAAAATGGGTTTAAAGTTTACAATAAGAAAAGGAGCAATAATGAAAATACGGCATTTAATTTCAATAATGAAAATGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCCGGAACCGCTTTGTTTTCGCATTCACAAATCATTTTCTTATATTATTAAATTAAAATCCTATAAACTTACTACCATATGAGTTGACAAGCCTTTTTCCTTTTATTTCTTTTATTTCTTTTCTCGTGAAATTAC

mRNA sequence

AAAATTTCTATATAACATCAAGAAGAAGAAAATAACTCCACATTCCACAACACAGCTATGGCTTCCAAATCTACCCTCTTCCTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGATTCGGTGATTACCGTCACGCTTTACACGGAGGAGGGGGACGGAATCCGGATTAAGGATCTGGAGAAATGGGGCGGGTTGATGGGAGCCGACTACAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGCCCATGCCTGAGCGGACCGGTGTGTTCATTGAATCTGACCTCCGATGGATCGGGTCCACACCATGGGTGGTACTGCAACTATGTTGAGGTGACGACGACGGGCGTCCACAGGTCGTGTGACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTGGATACGTCGCCGTATAATCTGACCGCCATCCGGGATAACTGCTCCAGTGGGAGTGGAAGCCGGCGTGATTTGATCCGGTCGGGTGAGCCGAATTTGAAATTGAAGCAGGTGGTATGAATATTAGGGATTGTATGATGTAATGTAATAAAAATGTTGTAGAATAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTAGCTGGAATTAATTGAAATGGGAGAGTGTTTTTTTCTGGAGTTGCGTAATTGGTAAGTTGGGAGAGGAGTAATAGTTAAATGGAGAGCAGTGTGTTGTGTTTAGCTGATCTACTTTTTGATCCGATCTTGTTCGTCAGGAATCATGAAAAATGGGTTTAAAGTTTACAATAAGAAAAGGAGCAATAATGAAAATACGGCATTTAATTTCAATAATGAAAATGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCCGGAACCGCTTTGTTTTCGCATTCACAAATCATTTTCTTATATTATTAAATTAAAATCCTATAAACTTACTACCATATGAGTTGACAAGCCTTTTTCCTTTTATTTCTTTTATTTCTTTTCTCGTGAAATTAC

Coding sequence (CDS)

ATGGCTTCCAAATCTACCCTCTTCCTCTCCATTCTCCTTTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGGTGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGATTCGGTGATTACCGTCACGCTTTACACGGAGGAGGGGGACGGAATCCGGATTAAGGATCTGGAGAAATGGGGCGGGTTGATGGGAGCCGACTACAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGCCCATGCCTGAGCGGACCGGTGTGTTCATTGAATCTGACCTCCGATGGATCGGGTCCACACCATGGGTGGTACTGCAACTATGTTGAGGTGACGACGACGGGCGTCCACAGGTCGTGTGACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTGGATACGTCGCCGTATAATCTGACCGCCATCCGGGATAACTGCTCCAGTGGGAGTGGAAGCCGGCGTGATTTGATCCGGTCGGGTGAGCCGAATTTGAAATTGAAGCAGGTGGTATGA

Protein sequence

MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDLIRSGEPNLKLKQVV

Homology

[Close]

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-58
Identity = 105/158 (66.46%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MASKSTL--FLSILLSFSAIAFS-DDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDG 60
           MA +  L  FL +L + SA+AF+ DDPDCVYT Y+RTGSI KAGTDS+I+  +Y ++GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  IRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYV 120
           I IK+L+ W GLMG DYNYFERGNLDIFSGR PCL  P+C+LNLTSDGSG HHGWY NYV
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNC 156
           E+TT GVH  C    F +EQWLA DTSPY LTA+R+NC
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55
Identity = 103/159 (64.78%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MASKSTLFLSILL---SFSAIAFSDD-PDCVYTVYIRTGSILKAGTDSVITVTLYTEEGD 60
           M  +  LFLS+LL   + SA+A +DD  DCVYT ++RTGS  KAGTDS+I+  +Y + GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GIRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY 120
            I I++LE WGGLMG  YNY+ERGNLDIFSG+ PCL  PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 VEVTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNC 156
           VEVTT GVH  C    F VEQWLA DTSPY L+A+R+NC
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34
Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 46  ITVTLYTEEGDGIRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDG 105
           +++ LY   G    I DL  WGGLMG  ++YFERGNLDIFSG G CLSGPVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 106 SGPHHGWYCNYVEVT-TTGVHRSCDQALFTVEQWLALDTSPYNL 149
           SG HHGWYCNYVEVT +    RSC Q  F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot
Match: Q8IVV2 (Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08
Identity = 35/108 (32.41%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 28   YTVYIRTGSILKAGTDSVITVTLYTEEGDG--IRIKDLEKWGGLMGADYNYFERGNLDIF 87
            YTV ++T  IL AGTD+ + + ++ E GD   + +K    W        N FER N D F
Sbjct: 1681 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1740

Query: 88   SGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVTTTG----VHRSCD 130
            +       G +C L +  D  G   GW+ +YV+V         H  CD
Sbjct: 1741 NFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCD 1780

[Close]

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot
Match: C8YR32 (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.7e-08
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 28   YTVYIRTGSILKAGTDSVITVTLYTEEGDG--IRIKDLEKWGGLMGADYNYFERGNLDIF 87
            YTV ++T  IL AGTD+ + + ++ E GD   + +K    W        N FER N D F
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1741

Query: 88   SGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEV 120
            +       G +C L +  D  G   GW+ +YV+V
Sbjct: 1742 NFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDV 1767

[Close]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL
Match: A0A5A7SYJ2 (Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002740 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.9e-88
Identity = 159/179 (88.83%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA+KSTLF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVIT TLYT  GDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGG+MG DYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDLIRSGEPNLKLKQVV 180
           TTGVHRSCDQ LFTVEQWLALD  PY+LTAI++NC SGS SRRDLIRSG PNL+LKQVV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSESRRDLIRSGGPNLELKQVV 179

[Close]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL
Match: A0A1S3B1J7 (lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103484981 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.9e-88
Identity = 159/179 (88.83%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA+KSTLF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVIT TLYT  GDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGG+MG DYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDLIRSGEPNLKLKQVV 180
           TTGVHRSCDQ LFTVEQWLALD  PY+LTAI++NC SGS SRRDLIRSG PNL+LKQVV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSESRRDLIRSGGPNLELKQVV 179

[Close]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL
Match: A0A0A0KGA0 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 158/181 (87.29%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA+KS LF SILLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVIT TLYT  GDGIRI
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGGLMG  YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSR--RDLIRSGEPNLKLKQV 180
           TTGVH  CDQ LFTVEQWLALD SPYNLT I++NC SGSGS   RDLIRSG+PNLKLKQV
Sbjct: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206

[Close]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL
Match: A0A1S3B1I1 (lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC107990289 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 144/165 (87.27%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDS I  TLY+ +GD +RI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
           KDLEKWGGLMG DYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDL 166
           TTGVHR C+QALFTVEQWLALD SPY LTAIR+NC SGSG +RDL
Sbjct: 121 TTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGSGIQRDL 165

[Close]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL
Match: A0A6J1KL50 (PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496734 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.4e-78
Identity = 150/182 (82.42%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MASKSTLF--LSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGI 60
           MASKS LF  LS+LLS S +A SDDPDCVYTVY+RTGSILKAGTDSVI+ TLYT  GDGI
Sbjct: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  RIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120
            IKDLEKWGGLMG DYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGS-GSRRDLIRSGEPNLKLKQ 180
           VTTTGVHR CDQA FTVEQWLALDTSPY LTAIR+NC   S GSRRD  RSG   L+LKQ
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSGP--LRLKQ 180

[Close]

BLAST of Lsi01G007560 vs. NCBI nr
Match: XP_008440608.1 (PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA0036292.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa] >TYK12686.1 lipoxygenase-like proteiny domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 159/179 (88.83%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA+KSTLF + LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVIT TLYT  GDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGG+MG DYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDLIRSGEPNLKLKQVV 180
           TTGVHRSCDQ LFTVEQWLALD  PY+LTAI++NC SGS SRRDLIRSG PNL+LKQVV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSESRRDLIRSGGPNLELKQVV 179

[Close]

BLAST of Lsi01G007560 vs. NCBI nr
Match: XP_004143473.2 (PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical protein Csa_003522 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 158/181 (87.29%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA+KS LF SILLSFSAIAFSD+PDCVYTVYIRTGSILKAGTDSVIT TLYT  GDGIRI
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGGLMG  YNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSR--RDLIRSGEPNLKLKQV 180
           TTGVH  CDQ LFTVEQWLALD SPYNLT I++NC SGSGS   RDLIRSG+PNLKLKQV
Sbjct: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206

[Close]

BLAST of Lsi01G007560 vs. NCBI nr
Match: XP_038883182.1 (PLAT domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.8e-82
Identity = 149/176 (84.66%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           M SKS LFLSILLSFSA AFSDDP CVYTVYIRTGS LKAGTDSVI+ TLY+ +GD + I
Sbjct: 1   MPSKSALFLSILLSFSATAFSDDPGCVYTVYIRTGSTLKAGTDSVISATLYSGQGDLVLI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
           KDLEKWGGLMG DYNYFERGNLD+FSGRGPCL+GPVC LNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDVFSGRGPCLTGPVCGLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDLIRSGEPNLKLK 177
           TTGVHR C+Q  FTVEQWLALD SPY LTAIRDNC  GSGSRRDLIRSG P+LKLK
Sbjct: 121 TTGVHRPCEQVQFTVEQWLALDASPYELTAIRDNCLHGSGSRRDLIRSGGPSLKLK 176

[Close]

BLAST of Lsi01G007560 vs. NCBI nr
Match: XP_008440610.1 (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 144/165 (87.27%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MASKSTLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGIRI 60
           MA KS LFLSILLSFSAIAFSDD DCVYTVYIRTGS LKAGTDS I  TLY+ +GD +RI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 61  KDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120
           KDLEKWGGLMG DYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGSGSRRDL 166
           TTGVHR C+QALFTVEQWLALD SPY LTAIR+NC SGSG +RDL
Sbjct: 121 TTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGSGIQRDL 165

[Close]

BLAST of Lsi01G007560 vs. NCBI nr
Match: XP_023517016.1 (PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78
Identity = 151/182 (82.97%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 1   MASKSTLF--LSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDGI 60
           MASKS LF  LS+LLS SA+A SDDPDCVYTVY+RTGSILKAGTDSVI+ TLYT  GDGI
Sbjct: 1   MASKSPLFLALSLLLSLSAVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60

Query: 61  RIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120
            I+DLEKWGGLMG DYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  LIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120

Query: 121 VTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNCSSGS-GSRRDLIRSGEPNLKLKQ 180
           VTTTGVHR CDQA FTVEQWLALDTSPY LTAIRDNC   S GSRRD  RSG   L+LKQ
Sbjct: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP--LRLKQ 180

[Close]

BLAST of Lsi01G007560 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 105/158 (66.46%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MASKSTL--FLSILLSFSAIAFS-DDPDCVYTVYIRTGSILKAGTDSVITVTLYTEEGDG 60
           MA +  L  FL +L + SA+AF+ DDPDCVYT Y+RTGSI KAGTDS+I+  +Y ++GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  IRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYV 120
           I IK+L+ W GLMG DYNYFERGNLDIFSGR PCL  P+C+LNLTSDGSG HHGWY NYV
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNC 156
           E+TT GVH  C    F +EQWLA DTSPY LTA+R+NC
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Lsi01G007560 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-56
Identity = 103/159 (64.78%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MASKSTLFLSILL---SFSAIAFSDD-PDCVYTVYIRTGSILKAGTDSVITVTLYTEEGD 60
           M  +  LFLS+LL   + SA+A +DD  DCVYT ++RTGS  KAGTDS+I+  +Y + GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GIRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNY 120
            I I++LE WGGLMG  YNY+ERGNLDIFSG+ PCL  PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 VEVTTTGVHRSCDQALFTVEQWLALDTSPYNLTAIRDNC 156
           VEVTT GVH  C    F VEQWLA DTSPY L+A+R+NC
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Lsi01G007560 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-35
Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 46  ITVTLYTEEGDGIRIKDLEKWGGLMGADYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDG 105
           +++ LY   G    I DL  WGGLMG  ++YFERGNLDIFSG G CLSGPVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 106 SGPHHGWYCNYVEVT-TTGVHRSCDQALFTVEQWLALDTSPYNL 149
           SG HHGWYCNYVEVT +    RSC Q  F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of Lsi01G007560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	1.9e-58	66.46	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.5e-55	64.78	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	2.4e-34	65.38	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]
Q8IVV2	3.9e-08	32.41	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOX...	[more]
C8YR32	6.7e-08	34.04	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lo...	[more]

BLAST of Lsi01G007560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYJ2	8.9e-88	88.83	Lipoxygenase-like proteiny domain-containing protein 1 OS=Cucumis melo var. maku...	[more]
A0A1S3B1J7	8.9e-88	88.83	lipoxygenase homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KGA0	1.4e-85	87.29	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500520 PE=4 S...	[more]
A0A1S3B1I1	7.5e-79	87.27	lipoxygenase homology domain-containing protein 1-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1KL50	6.4e-78	82.42	PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11149673...	[more]

BLAST of Lsi01G007560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440608.1	1.8e-87	88.83	PREDICTED: lipoxygenase homology domain-containing protein 1 [Cucumis melo] >KAA...	[more]
XP_004143473.2	2.9e-85	87.29	PLAT domain-containing protein 1 [Cucumis sativus] >KGN48760.1 hypothetical prot...	[more]
XP_038883182.1	8.8e-82	84.66	PLAT domain-containing protein 3 [Benincasa hispida]	[more]
XP_008440610.1	1.6e-78	87.27	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo]	[more]
XP_023517016.1	2.6e-78	82.97	PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G007560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	1.3e-59	66.46	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	1.0e-56	64.78	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.7e-35	65.38	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 28..149 e-value: 1.9E-15 score: 57.4
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 26..153 score: 27.13549
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 15..144 e-value: 2.7E-22 score: 80.9
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 2..160
None	No IPR available	PANTHER	PTHR31718:SF48	PLAT-PLANT-STRESS PROTEIN	coord: 2..160
None	No IPR available	CDD	cd01754	PLAT_plant_stress	coord: 26..154 e-value: 1.93648E-79 score: 230.505
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 27..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G007560.1	Lsi01G007560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding