Lsi01G007400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G007400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Peptidylprolyl isomerase
Location	chr01: 5829893 .. 5832984 (-)
RNA-Seq Expression	Lsi01G007400
Synteny	Lsi01G007400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTGTGGGGCCCTACATTTTGCCATATCCAAGTGCGCATTCATTCAAACCACTGCCTCAAGAGCATCAAACAGTTACCATTGCCACCTTCACTTCAACCTCCAAGGCCAAAGCATCAGATTCAGCACAATCTGATCATACTAAAATGGCACTCTCCCCATTAACCTTCACAACCCCAAGAGCCCAAGCTTCCCAAATTTTCACTCCCAAATTATCTTCCACTCTTAAACCCACTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAAAAGGCAATATCTAACATGGGCATTGGGCTTCTTGCTGCTTCGGTTTTGGCTCTGTCGCCCTTGGATGCCAACGCTACCAGAATTGAATACTATGCCACTATTGGAGAACCCCTTTGTGAGTTCAACTACGCGCCTTCCGGGCTTGGGTATTGCGACATCGCTGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTCAGTTCCAATCTTCAATTATCAAGTAATTTCTCATTTTACTTTTCTTCACATCATCAAATTCAACCATGGTTTTACATGACCGCTTGTTTCCGTCGAACTTCTCTTGCATTGCGTTGTTGAATTCAAATTCAATATGGTAATCGTCAAATTCAACTTCTCTTGTTTTACTTCTCATTATCAATGGCATGTGCAATTCCCTCCAATACGCAGTTATGTCGAGTATATGAATCATTATCTAATATGTGTCTGTCTTTTTTTGCTGAATTCGCATGTGGGTAAGTCTTCTTAATGTGCATATGTTATGTGACGTGTTGCAATGTTCTGCAGTTGACAATCGTTTATAAATTGTTTTTGGCTTATTTTACCTTTCAAATGTAGGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTACAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTATTGATTAAATGTTCTATACAGTTTCTTAAGGTGCATATGAGCTTGAGAAGTTTGGCCAATTTATTTAAGAGAGCTGCTACAGGCTTTGAGAGCAATGATACCGATTAAGAGAACAGAGTGATGAAAAGATATATATTTGAAGTTATTGGTAACTGAATCAATTTATGCACTTTCCAGCATAAGTCATTTCTTTTGGAAAACATAATTGAGCTGAATCCAATTATACTTATACTTATGAGAATCAACAAAAAGAAACTTAATTAGAGTAAAAAAAAAGTCAACAGAATAGCCTGTCTAGGATTGAGGCACGTCTCTCTTTGTGCCATCTTAACAAAATTGGGGACTTGCTGCATCAACTTGGTTGACATTCATCTCCCTCTATGCAACTATCTTCTAAGAGACCTTGTGTGGAGTTAGTTCTCCCACAAATCCCAATTGTTTGTATGCCAAAGATGTAGAAAGAAAATGGTGGGTGTTTCTTTAACGATTTGATAAGAAAAGAGCTGAATGAGAGTGGAAGAAAGGTCTCTTTTATCAAGATGGGAGGGTCAGGGTACTGAAGTATTTCCTTCTCCCATACGTAGATTAGGAGGAAGATACTATTTGTAAAGCTAACTTTTCATTTACTTGCAACCAATCAAAATGCATAATATGGATAAATAATTCATTAACTTAGTCACTAACGACATTCATTTCACCTTCTCGAGGCGTGTGTGTAACTGAGTGGGTGTAGTTACTTCATTGGAAAAGGTCTAAAATTGATTAGTTTGTTACCAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTATGTCTACTGACAAAATGAGTAGGATTTTGTGGTTTTCTTTTCGTGCGGATTTGCTTCTAAGAAATTATTGCCCCTCTGATTTTGCCCAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGCTTTTCAGGTTGAATTCTTTAAAGTAAACTGCTTTGTTTTGAGCGTTGGCTATCTAAATTTCCATGATAGTGTTGCAAACTGTCAGCCATTGCTTCTTGTTCGGGATGTTTACTGTAGTTTATTGTGTGCAAATGCATTATTTGTCAGTGTCGTTGCTTTGCTCCCTATTTCCTTTTTTGCTGCTACTGAAACCCAAGTACCAAGTAACTAATGGACGCTGTTAATCTATCTTTGTGTTGCCTTTACAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCATTGGAGTCTACTCGGGTAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAACTTCTTGTAGATAGACAACACAGAGTAAGTGATTTTCTGACTTTTCTAAATGTGCAATCATATAAACCTTCCCTTTTGTTGGTTTCTCTTTGAAGTTGTGCTCACGGCAGAACTATCTTAACATATCCCATTTTGTTTTTTGCCCATCTCATACAGTAGAATCACAACAGTTATCTTAAAAGTGTCTCAGATTGGAAATTACCATTGCATGTGCATGTGCATGCTTCCTGCTTCATCTTATGTTCATCATATGCTTTTTTTCCCCTTCGGTTACCCAGAACTTAAGTCAAAGCTAAACCACGAGCCAAAAGAAGTGCATTTCTCTCTGGATTTTCCAAGGATGTGGAACTCAAGCTGAATCTTAAGGCAGAATACTTGGTTTTCTCCAATTACCCACCAGTAGGACTGGCAATCTTTGTAGGTGAAACTCCCAGCTAGGCATGGTTGAAATTGCTCAATTTCAAACATAATTGACCAAACTATGTATTTGGTTGTTTTACAAGCTTATGACTGTATTTCCATGCACGGAAACTATTATACTTTGTAAAAGTACGTCTTGTTTCTGAGTAGTTCAGTAACTTTCTTCAAATGGAATCTAATGATGGGCGCATTTTGTTTGAACTTATTCTTTTTTAATATGATTGAATTGTCAATGAACTCAAAATTAGTACACACAAATCACCCTTATTTTTTTCTCGCTGCGATTTCTCTTTATGCTACCTTTGGATGTGAGAAAAAGGTTAACGGGAAAAAAAAGGTTCCGAAAGCCAAAAGCAAAGAAAG

mRNA sequence

CTGCTGTGGGGCCCTACATTTTGCCATATCCAAGTGCGCATTCATTCAAACCACTGCCTCAAGAGCATCAAACAGTTACCATTGCCACCTTCACTTCAACCTCCAAGGCCAAAGCATCAGATTCAGCACAATCTGATCATACTAAAATGGCACTCTCCCCATTAACCTTCACAACCCCAAGAGCCCAAGCTTCCCAAATTTTCACTCCCAAATTATCTTCCACTCTTAAACCCACTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAAAAGGCAATATCTAACATGGGCATTGGGCTTCTTGCTGCTTCGGTTTTGGCTCTGTCGCCCTTGGATGCCAACGCTACCAGAATTGAATACTATGCCACTATTGGAGAACCCCTTTGTGAGTTCAACTACGCGCCTTCCGGGCTTGGGTATTGCGACATCGCTGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTACAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCATTGGAGTCTACTCGGGTAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAACTTCTTGTAGATAGACAACACAGATAGAATCACAACAGTTATCTTAAAAGTGTCTCAGATTGGAAATTACCATTGCATGTGCATGTGCATGCTTCCTGCTTCATCTTATGTTCATCATATGCTTTTTTTCCCCTTCGGTTACCCAGAACTTAAGTCAAAGCTAAACCACGAGCCAAAAGAAGTGCATTTCTCTCTGGATTTTCCAAGGATGTGGAACTCAAGCTGAATCTTAAGGCAGAATACTTGGTTTTCTCCAATTACCCACCAGTAGGACTGGCAATCTTTGTAGGTGAAACTCCCAGCTAGGCATGGTTGAAATTGCTCAATTTCAAACATAATTGACCAAACTATGTATTTGGTTGTTTTACAAGCTTATGACTGTATTTCCATGCACGGAAACTATTATACTTTGTAAAAGTACGTCTTGTTTCTGAGTAGTTCAGTAACTTTCTTCAAATGGAATCTAATGATGGGCGCATTTTGTTTGAACTTATTCTTTTTTAATATGATTGAATTGTCAATGAACTCAAAATTAGTACACACAAATCACCCTTATTTTTTTCTCGCTGCGATTTCTCTTTATGCTACCTTTGGATGTGAGAAAAAGGTTAACGGGAAAAAAAAGGTTCCGAAAGCCAAAAGCAAAGAAAG

Coding sequence (CDS)

ATGGCACTCTCCCCATTAACCTTCACAACCCCAAGAGCCCAAGCTTCCCAAATTTTCACTCCCAAATTATCTTCCACTCTTAAACCCACTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAAAAGGCAATATCTAACATGGGCATTGGGCTTCTTGCTGCTTCGGTTTTGGCTCTGTCGCCCTTGGATGCCAACGCTACCAGAATTGAATACTATGCCACTATTGGAGAACCCCTTTGTGAGTTCAACTACGCGCCTTCCGGGCTTGGGTATTGCGACATCGCTGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTACAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCATTGGAGTCTACTCGGGTAATAGGAAGTGA

Protein sequence

MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK

Homology

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BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot
Match: Q9SCY3 (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 8.9e-76
Identity = 143/214 (66.82%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MALSPLTFTT---PRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLA 60
           MA+S LT T     R+    IF    SS+      SS+S      + KK +  +G+G LA
Sbjct: 1   MAISTLTLTQSLYTRSFRPTIFFSSSSSSSFSCLCSSSSDCEPKLSVKKRVFGVGLGFLA 60

Query: 61  ASVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYT 120
           +S+L+L+PLDA+ATRI+YYAT+G+PLCE++YA SGLG+CD+ VG G+E P G L+N+HYT
Sbjct: 61  SSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYT 120

Query: 121 ARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLA 180
           ARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VGGKRKLQIPP LA
Sbjct: 121 ARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLA 180

Query: 181 YGPEPAGCFSGDCNIPGNATLVYDINFIGVYSGN 212
           YGPEPAGCFSGDCNIPGNATL+YDINF+ +Y G+
Sbjct: 181 YGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

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BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot
Match: Q9SCY2 (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 3.3e-38
Identity = 72/123 (58.54%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 84  CEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 143
           CEF+ +PSGL +CD  VG G E   G+LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 144 KVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 203
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 204 FIG 207
           +IG
Sbjct: 204 YIG 206

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BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot
Match: Q6CGG3 (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FPR2 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 109 GELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 168
           G+ ++VHYT +  DG VFDSS +R +P+   +G G+VI G DQGILG      M VG KR
Sbjct: 48  GDTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILG------MCVGEKR 107

Query: 169 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGV 208
           KL IPPHLAYG + AG       IP ++TL++    + +
Sbjct: 108 KLTIPPHLAYGKQGAGRV-----IPPDSTLIFTTELVSI 135

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BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot
Match: Q54SR7 (FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 109 GELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 168
           G+ + +HYT    +G  FDSS  R  P   +IGVG+VI+G DQG+LG      M VG KR
Sbjct: 45  GDKLKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLG------MCVGEKR 104

Query: 169 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGV 208
           KL IPP L YG + AG       IPGN+ L++D+  IG+
Sbjct: 105 KLIIPPSLGYGQQGAG-----DKIPGNSHLIFDVELIGI 132

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BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot
Match: Q6BP84 (FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=FPR2 PE=3 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 9.4e-17
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 109 GELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 168
           G+LI+VHY  +  DG VFDSSY R +P++ ++G+G+VI+G DQG+        M +G KR
Sbjct: 40  GDLISVHYEGKLEDGTVFDSSYSRGQPISFQLGIGQVIQGWDQGL------TRMCIGEKR 99

Query: 169 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGVYSGNR 213
           KL IP HLAYG    G       IP  ATLV+    + +   ++
Sbjct: 100 KLTIPSHLAYGDRGVG------PIPAKATLVFVAELVDIAGSSK 131

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BLAST of Lsi01G007400 vs. ExPASy TrEMBL
Match: A0A1S3B1J6 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALSPLTFTTPRAQASQIFTPKLSST+KPTS+   SS SSVSATKKAISNMGIGLLAASV
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPTST---SSYSSVSATKKAISNMGIGLLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEFNY PSGLGYCDIAVGSGEEVPYGELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           +DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP
Sbjct: 121 SDGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

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BLAST of Lsi01G007400 vs. ExPASy TrEMBL
Match: A0A5A7T4H4 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002610 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALSPLTFTTPRAQASQIFTPKLSST+KPTS+   SS SSVSATKKAISNMGIGLLAASV
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPTST---SSYSSVSATKKAISNMGIGLLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEFNY PSGLGYCDIAVGSGEEVPYGELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           +DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP
Sbjct: 121 SDGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

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BLAST of Lsi01G007400 vs. ExPASy TrEMBL
Match: A0A0A0KGU0 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 204/226 (90.27%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPT-------------SSSSASSSSSVSATKKA 60
           MALSPLTFTTPR QASQIF+PKLSST+KPT             SSSS+SSSSSVSATKKA
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSSSSSSSSSSSSVSATKKA 115

Query: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVP 120
           ISNMGIGLLAASVLALSPLDANATRIEYYAT+GEPLCEFNY PSGLGYCDIAVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YGELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           YGELINVHYTARFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

[Close]

BLAST of Lsi01G007400 vs. ExPASy TrEMBL
Match: A0A6J1KSN7 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111497240 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.3e-105
Identity = 193/213 (90.61%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALS LTFTTPRAQAS+IF+P+LSS +KPT +SS+SSSSSVSA KKAISN+G+G+LAASV
Sbjct: 1   MALSSLTFTTPRAQASRIFSPRLSSAVKPTPTSSSSSSSSVSAAKKAISNVGVGVLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEF Y PSGLGYCD+AVGSGEEVPY ELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213

[Close]

BLAST of Lsi01G007400 vs. ExPASy TrEMBL
Match: A0A6J1HHY0 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111463138 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.0e-103
Identity = 193/213 (90.61%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALS LTFTTPRAQASQIF+P+LSS +KPT      SSSSVSATKKAISN+GIG+LAASV
Sbjct: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPT---PCCSSSSVSATKKAISNVGIGVLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEF Y PSGLGYCD+AVGSGEEVPY ELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

[Close]

BLAST of Lsi01G007400 vs. NCBI nr
Match: XP_008440633.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440634.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440635.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >KAA0036279.1 photosynthetic NDH subunit of lumenal location 4 [Cucumis melo var. makuwa] >TYK12673.1 photosynthetic NDH subunit of lumenal location 4 [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108
Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALSPLTFTTPRAQASQIFTPKLSST+KPTS+   SS SSVSATKKAISNMGIGLLAASV
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPTST---SSYSSVSATKKAISNMGIGLLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEFNY PSGLGYCDIAVGSGEEVPYGELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           +DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP
Sbjct: 121 SDGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

[Close]

BLAST of Lsi01G007400 vs. NCBI nr
Match: XP_038882610.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882611.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882612.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882613.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 202/213 (94.84%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALS LTFTTPRAQASQ+FTPKLSSTLKPT      SSSSVSATKKAISNMGIGLLAASV
Sbjct: 1   MALSSLTFTTPRAQASQVFTPKLSSTLKPT-----PSSSSVSATKKAISNMGIGLLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATR+EYYAT+GEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF
Sbjct: 61  LALSPLDANATRVEYYATVGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 208

[Close]

BLAST of Lsi01G007400 vs. NCBI nr
Match: XP_004143483.3 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis sativus] >XP_011657984.2 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis sativus] >KAE8647562.1 hypothetical protein Csa_003906 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 204/215 (94.88%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKP--TSSSSASSSSSVSATKKAISNMGIGLLAA 60
           MALSPLTFTTPR QASQIF+PKLSST+KP  TSSSS+SSSSSVSATKKAISNMGIGLLAA
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSVSATKKAISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTA 120
           SVLALSPLDANATRIEYYAT+GEPLCEFNY PSGLGYCDIAVGSGEEVPYGELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180
           RFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY
Sbjct: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           GPEPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 215

[Close]

BLAST of Lsi01G007400 vs. NCBI nr
Match: XP_023003750.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 193/213 (90.61%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALS LTFTTPRAQAS+IF+P+LSS +KPT +SS+SSSSSVSA KKAISN+G+G+LAASV
Sbjct: 1   MALSSLTFTTPRAQASRIFSPRLSSAVKPTPTSSSSSSSSVSAAKKAISNVGVGVLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEF Y PSGLGYCD+AVGSGEEVPY ELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213

[Close]

BLAST of Lsi01G007400 vs. NCBI nr
Match: XP_023517456.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 9.7e-104
Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 1   MALSPLTFTTPRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLAASV 60
           MALS LTFTTPRAQASQIF+P+LSS +KPT S   SSSSSVSATKKAISN+GIG+LAASV
Sbjct: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPS---SSSSSVSATKKAISNVGIGVLAASV 60

Query: 61  LALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARF 120
           LALSPLDANATRIEYYAT+GEPLCEF Y PSGLGYCD+AVGSGEEVPY ELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFIGVYSGNRK 214
           EPAGCFSGDCNIPGNATLVYDINF+GVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

[Close]

BLAST of Lsi01G007400 vs. TAIR 10
Match: AT4G39710.1 (FK506-binding protein 16-2 )

HSP 1 Score: 284.6 bits (727), Expect = 6.3e-77
Identity = 143/214 (66.82%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MALSPLTFTT---PRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLA 60
           MA+S LT T     R+    IF    SS+      SS+S      + KK +  +G+G LA
Sbjct: 1   MAISTLTLTQSLYTRSFRPTIFFSSSSSSSFSCLCSSSSDCEPKLSVKKRVFGVGLGFLA 60

Query: 61  ASVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYT 120
           +S+L+L+PLDA+ATRI+YYAT+G+PLCE++YA SGLG+CD+ VG G+E P G L+N+HYT
Sbjct: 61  SSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYT 120

Query: 121 ARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLA 180
           ARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VGGKRKLQIPP LA
Sbjct: 121 ARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLA 180

Query: 181 YGPEPAGCFSGDCNIPGNATLVYDINFIGVYSGN 212
           YGPEPAGCFSGDCNIPGNATL+YDINF+ +Y G+
Sbjct: 181 YGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

[Close]

BLAST of Lsi01G007400 vs. TAIR 10
Match: AT4G39710.2 (FK506-binding protein 16-2 )

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-49
Identity = 102/165 (61.82%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 1   MALSPLTFTT---PRAQASQIFTPKLSSTLKPTSSSSASSSSSVSATKKAISNMGIGLLA 60
           MA+S LT T     R+    IF    SS+      SS+S      + KK +  +G+G LA
Sbjct: 1   MAISTLTLTQSLYTRSFRPTIFFSSSSSSSFSCLCSSSSDCEPKLSVKKRVFGVGLGFLA 60

Query: 61  ASVLALSPLDANATRIEYYATIGEPLCEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYT 120
           +S+L+L+PLDA+ATRI+YYAT+G+PLCE++YA SGLG+CD+ VG G+E P G L+N+HYT
Sbjct: 61  SSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYT 120

Query: 121 ARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM 163
           ARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM
Sbjct: 121 ARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM 165

[Close]

BLAST of Lsi01G007400 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 )

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-39
Identity = 72/123 (58.54%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 84  CEFNYAPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 143
           CEF+ +PSGL +CD  VG G E   G+LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 144 KVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 203
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 204 FIG 207
           +IG
Sbjct: 204 YIG 206

[Close]

BLAST of Lsi01G007400 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 )

HSP 1 Score: 85.5 bits (210), Expect = 5.6e-17
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 109 GELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 168
           G+ I VHY  +  DG VFDSS++R  P   ++G G+VI+G DQG+LG        VG KR
Sbjct: 52  GDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CVGEKR 111

Query: 169 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGV 208
           KL+IP  L YG +          IPG ATL++D   I V
Sbjct: 112 KLKIPAKLGYGEQ-----GSPPTIPGGATLIFDTELIAV 139

[Close]

BLAST of Lsi01G007400 vs. TAIR 10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1 )

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-16
Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 109 GELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 168
           G+ I VHY  +  DG VFDSS++R  P+   +G G+VI G DQG+LG        VG KR
Sbjct: 52  GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGA------CVGEKR 111

Query: 169 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFIGV 208
           KL+IP  L YG            IPG ATL++D   + V
Sbjct: 112 KLKIPSKLGYGDN-----GSPPKIPGGATLIFDTELVAV 139

The following BLAST results are available for this feature:

BLAST of Lsi01G007400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY3	8.9e-76	66.82	Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis t...	[more]
Q9SCY2	3.3e-38	58.54	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thalian...	[more]
Q6CGG3	1.1e-17	46.46	FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=2845...	[more]
Q54SR7	3.2e-17	46.46	FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1	[more]
Q6BP84	9.4e-17	42.31	FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / ...	[more]

BLAST of Lsi01G007400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1J6	1.8e-108	95.31	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1	[more]
A0A5A7T4H4	1.8e-108	95.31	Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KGU0	1.3e-106	90.27	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1	[more]
A0A6J1KSN7	7.3e-105	90.61	Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111497240 PE=4 SV=1	[more]
A0A6J1HHY0	4.0e-103	90.61	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111463138 PE=4 SV=1	[more]

BLAST of Lsi01G007400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440633.1	3.8e-108	95.31	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucu...	[more]
XP_038882610.1	1.1e-107	94.84	photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispi...	[more]
XP_004143483.3	1.4e-107	94.88	photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis sativus...	[more]
XP_023003750.1	1.5e-104	90.61	photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita maxim...	[more]
XP_023517456.1	9.7e-104	91.55	photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo ...	[more]

BLAST of Lsi01G007400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39710.1	6.3e-77	66.82	FK506-binding protein 16-2	[more]
AT4G39710.2	3.3e-49	61.82	FK506-binding protein 16-2	[more]
AT5G45680.1	2.4e-39	58.54	FK506-binding protein 13	[more]
AT5G48580.1	5.6e-17	44.44	FK506- and rapamycin-binding protein 15 kD-2	[more]
AT3G25220.1	2.8e-16	43.43	FK506-binding protein 15 kD-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.50.40		coord: 82..207 e-value: 4.5E-41 score: 142.0
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 86..207
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 108..204 e-value: 1.7E-24 score: 85.9
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 109..208 score: 24.362659
IPR044183	Photosynthetic NDH subunit of lumenal location 4-like	PANTHER	PTHR47833	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC	coord: 1..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G007400.1	Lsi01G007400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity