Lsi01G006440 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G006440
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	bZIP transcription factor 53-like
Location	chr01: 5188660 .. 5190901 (-)
RNA-Seq Expression	Lsi01G006440
Synteny	Lsi01G006440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAACCGCCATTAACCATCCTGTTTCCTTCCTCCCCCGGTCCTTCTCAACTTACAACTTAGATTTCAATTATTCTCTCAAGTTTTTTCTTTCTGCATTTTGATTCTTATCTTTACATAGCTAATTTTAATTAATTTTTGTTGTTCTCGATGCTTTAATTAAACTGCCCATGTCTCCGGTTGTGAGTGAACTTCTTCTTTCTGGGTTTATTATAAACTCAACTCTTCGCCGTAGGACCCATTTAGTTCAATCCTTCTCCGTTGTCTTCCTTTACTGGTTCTATGTCTTCTCCTAAACATACAATCTTAATTACTATAATTAATTTAATTTTCCTCTTTTAATTCATATAATATAATCTTTACCTACGTTTTCATGATCTCCTTTTCTTTGTCATTTTTCCTCCTCAATCTATAAACCATTTAATTATCATATTATCAAAACTAATGGCATCTTCAAGTGGAGCTTCATCTGGGTCGGCCAACTGCGGTGATCAGGAGGTGGAGAGGAAGCGCCGGAGAATGCAGTCTAATCGGGAATCGGCTCGACGATCTCGACTGCGAAAGAAAAAACATTTAGATGATCTCACTGACCAGGTAATTTAATTTGTGTACCTGTCTTCAATCACAAATTATAACATGATAAATTTATTTTTTTCGATAAAAGATTAGTTTCTTTATGTTTTTTTTTTTTTTCTAATGGGAGAGTGCACAGAAATGGATGCAGCCTTTGCACCTAAATATCACTTATTTAATTTATGAGGAAGGTTTGATGACAATATTTTACTCTCCTCCAAAAAAAAAATATAGTAATATAGATGCAACTCAAATTACATTCATTTTTATGCATTTCTTTAATTGCAAAAAAATACATATAAAAAGTTTTTTTAAAATAAAATATTTATCACGTGACAATATATGATTGGACACTTAAATAAATGGTATAAAGATGAGTATAACTGAAATGTATCGCCAAAATAAGTATAGTTCAATTAGCATGATGCTTGTACTTTAATCTTAAAAAAGGTGTTATAATTTTTTTTTTATCTTTGATTTATTTATTTATTGCTAATTCATCTAGCAAATTAACTTTAATCAATGTATAAATTAACTATTGGTTTGATTTTTTTTATTTAAAAAATTAACAAACAAAAAAGTTATAGTGTTATTTTTCCCTAAAATGTTATCAATTTTATATTAATTAAAAGAAAATTATTATAAACAAAAAAAAATATAAAACCATTTACAAATATAGAAAAATTTCATAATCTATTAGCGATAGACCACAATAAAATTCTATCGTTTTCGCTAATAGACTGTGAATTATTTTTATATTTATAAATTATTTTACTCAGTTTTTTATTTAAAAATTGTTGTTAATTAAACACATATGAATTCTTTCAAACGATAATAGAGAAATGAAATGCTAAAATTATAGCAATACATGTTTATGGTCCACATTAAAATTATATTTTTCCCTTTTCAAATAGTGTAAAAAGATTAGAGAGAAAAAAAAGACCTTTAAATTTTTAAATAATCGTCAGATTGTAAGTGATTGTAGAAGTGCTCTCGTGTTAAATAGATAATTGCCCACACATGAGGTACGTCACTCCATACGTGGGATCTTCAAAGAAAATTTTGTTTATTTTAATATTCAACACCAACAAATTATAATTGGACAATTCCAGATAAGTGCATATTTTCTTATAAAAAGATGCGTTTCATCTAGTCATTTTTTTTAGTTGTTAAGAGTGTCTGACTCGGGTAATTCAGGTGAGTCGACTCAAGAACCATAACAATGAGATGGTGGCGAACATGAACGTGGCGGCGAATCTGTGCGTCAGCTTGGAGGCGGAGAACTCGATCCTCCGAGCTCAGATGGCGGAGCTAACCCACAGATTACAGTCTCTAAACGACATCGTAATGTTTATAAACTCCGTGGAGGTGTTGGAAACATTTTCCGATGATTTGAATAATGGGTTTGAAGATGAAGATTACTACAATCCTTGGAGATATCCATTTGCAAATTAGAAGTAACCAATCAATATTCGAACACACAAATAATTGTTGATAAAGATTGATGTGTGTGTGTGTGTGACGTGTTGGTGGCCTGCGTTTCTCATCGTTTTATTTATTAATAATTAATTATGGGTCCAAAATTTCAACCAACGCAAAACAAACGTCATTTTCATTTTCTTTTTCCTTTCCTTTTTTAATTGTATATTTTATATCTCCTCCTTATCCT

mRNA sequence

ATAAAACCGCCATTAACCATCCTGTTTCCTTCCTCCCCCGGTCCTTCTCAACTTACAACTTAGATTTCAATTATTCTCTCAAGTTTTTTCTTTCTGCATTTTGATTCTTATCTTTACATAGCTAATTTTAATTAATTTTTGTTGTTCTCGATGCTTTAATTAAACTGCCCATGTCTCCGGTTGTGAGTGAACTTCTTCTTTCTGGGTTTATTATAAACTCAACTCTTCGCCGTAGGACCCATTTAGTTCAATCCTTCTCCGTTGTCTTCCTTTACTGGTTCTATGTCTTCTCCTAAACATACAATCTTAATTACTATAATTAATTTAATTTTCCTCTTTTAATTCATATAATATAATCTTTACCTACGTTTTCATGATCTCCTTTTCTTTGTCATTTTTCCTCCTCAATCTATAAACCATTTAATTATCATATTATCAAAACTAATGGCATCTTCAAGTGGAGCTTCATCTGGGTCGGCCAACTGCGGTGATCAGGAGGTGGAGAGGAAGCGCCGGAGAATGCAGTCTAATCGGGAATCGGCTCGACGATCTCGACTGCGAAAGAAAAAACATTTAGATGATCTCACTGACCAGGTGAGTCGACTCAAGAACCATAACAATGAGATGGTGGCGAACATGAACGTGGCGGCGAATCTGTGCGTCAGCTTGGAGGCGGAGAACTCGATCCTCCGAGCTCAGATGGCGGAGCTAACCCACAGATTACAGTCTCTAAACGACATCGTAATGTTTATAAACTCCGTGGAGGTGTTGGAAACATTTTCCGATGATTTGAATAATGGGTTTGAAGATGAAGATTACTACAATCCTTGGAGATATCCATTTGCAAATTAGAAGTAACCAATCAATATTCGAACACACAAATAATTGTTGATAAAGATTGATGTGTGTGTGTGTGTGACGTGTTGGTGGCCTGCGTTTCTCATCGTTTTATTTATTAATAATTAATTATGGGTCCAAAATTTCAACCAACGCAAAACAAACGTCATTTTCATTTTCTTTTTCCTTTCCTTTTTTAATTGTATATTTTATATCTCCTCCTTATCCT

Coding sequence (CDS)

ATGGCATCTTCAAGTGGAGCTTCATCTGGGTCGGCCAACTGCGGTGATCAGGAGGTGGAGAGGAAGCGCCGGAGAATGCAGTCTAATCGGGAATCGGCTCGACGATCTCGACTGCGAAAGAAAAAACATTTAGATGATCTCACTGACCAGGTGAGTCGACTCAAGAACCATAACAATGAGATGGTGGCGAACATGAACGTGGCGGCGAATCTGTGCGTCAGCTTGGAGGCGGAGAACTCGATCCTCCGAGCTCAGATGGCGGAGCTAACCCACAGATTACAGTCTCTAAACGACATCGTAATGTTTATAAACTCCGTGGAGGTGTTGGAAACATTTTCCGATGATTTGAATAATGGGTTTGAAGATGAAGATTACTACAATCCTTGGAGATATCCATTTGCAAATTAG

Protein sequence

MASSSGASSGSANCGDQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETFSDDLNNGFEDEDYYNPWRYPFAN

Homology

[Close]

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-19
Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 4   SSGASSGSANCGDQE--------VERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLK 63
           SS +++G AN G +          ERKR+R QSNRESARRSR+RK+KHLDDLT QV+ L+
Sbjct: 16  SSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLR 75

Query: 64  NHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
             N ++VA + V     V++EAEN ILRAQ+ EL HRLQSLN+IV F+ S
Sbjct: 76  KENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVES 125

[Close]

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 58/109 (53.21%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 2   ASSSGASSGS--ANCGDQE---VERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKN 61
           +SSSG +S +   + G +E    +RKR+RM SNRESARRSR++K+K LDDLT QV+ LK 
Sbjct: 3   SSSSGTTSSTIQTSSGSEESLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKK 62

Query: 62  HNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
            N E+V ++++     +++EAENS+LRAQ+ EL HRLQSLNDI+ F++S
Sbjct: 63  ENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDS 111

[Close]

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-18
Identity = 56/106 (52.83%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 3   SSSGASSGSANCGDQEV---ERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNN 62
           SSS +  G+ N  D  V   ERKR+RM SNRESARRSR+RK+KH+DDLT Q+++L N N 
Sbjct: 10  SSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNR 69

Query: 63  EMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
           +++ ++ V + L + ++AENS+L AQM EL+ RLQSLN+IV  + S
Sbjct: 70  QILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQS 115

[Close]

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 20  ERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNNEMVANMNVAANLCVSLEAEN 79
           ERKR+RM SNRESARRSR+RK+K L DL ++V+ LKN N ++   ++ A+   + +E++N
Sbjct: 24  ERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESKN 83

Query: 80  SILRAQMAELTHRLQSLNDIVMFINSVEVLETFSDDLNNGFEDEDYYNPWRYP 133
           ++LRAQ +ELT RL+SLN ++  +  +         L+     E   NPW+ P
Sbjct: 84  NVLRAQASELTDRLRSLNSVLEMVEEIS-----GQALDIPEIPESMQNPWQMP 131

[Close]

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-11
Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 1   MASSSGASSGSANCGDQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNNE 60
           ++ ++G +SGS      +  R+ +R  SNRESARRSRLRK++HLD+L  +V+RL+  N  
Sbjct: 6   LSPTAGRTSGSDGDSAADTHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNAR 65

Query: 61  MVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETFSDDLNNGF 120
           + A     A+    +E EN++LRA+ AEL  RL+S+N++   +  VE     + D+    
Sbjct: 66  VAARARDIASQYTRVEQENTVLRARAAELGDRLRSVNEV---LRLVEEFSGVAMDIQEEM 125

Query: 121 -EDEDYYNPWRYPF 134
             D+    PW+ P+
Sbjct: 126 PADDPLLRPWQLPY 136

[Close]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL
Match: A0A5D3CN59 (BZIP transcription factor 53-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001700 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-42
Identity = 105/148 (70.95%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 1   MASSSGASSGSANCG---------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQV 60
           MASSSG SSGS N G         D EVERKRRRMQSNRE+ARRSR+RK+KHLDDLTDQ+
Sbjct: 1   MASSSGVSSGSTNGGIRPSIGSEDDLEVERKRRRMQSNREAARRSRIRKQKHLDDLTDQI 60

Query: 61  SRLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLE- 120
           S+LKNHNNEM  NM +  +LC+SLEAENSIL AQ AELT+RL+SLN I+ FI S+EVLE 
Sbjct: 61  SQLKNHNNEMATNMTLMMSLCISLEAENSILLAQTAELTNRLKSLNSIIKFIESMEVLEK 120

Query: 121 TFS---DDLNNGFEDEDYYNPWRYPFAN 136
           TFS   +D NNGFE+EDY NPWRYPFAN
Sbjct: 121 TFSYEIEDFNNGFEEEDYCNPWRYPFAN 148

[Close]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL
Match: A0A1S3B1Y1 (bZIP transcription factor 53-like OS=Cucumis melo OX=3656 GN=LOC103485085 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-42
Identity = 105/148 (70.95%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 1   MASSSGASSGSANCG---------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQV 60
           MASSSG SSGS N G         D EVERKRRRMQSNRE+ARRSR+RK+KHLDDLTDQ+
Sbjct: 1   MASSSGVSSGSTNGGIRPSIGSEDDLEVERKRRRMQSNREAARRSRIRKQKHLDDLTDQI 60

Query: 61  SRLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLE- 120
           S+LKNHNNEM  NM +  +LC+SLEAENSIL AQ AELT+RL+SLN I+ FI S+EVLE 
Sbjct: 61  SQLKNHNNEMATNMTLMMSLCISLEAENSILLAQTAELTNRLKSLNSIIKFIESMEVLEK 120

Query: 121 TFS---DDLNNGFEDEDYYNPWRYPFAN 136
           TFS   +D NNGFE+EDY NPWRYPFAN
Sbjct: 121 TFSYEIEDFNNGFEEEDYCNPWRYPFAN 148

[Close]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL
Match: A0A0A0KMA4 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504520 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.1e-41
Identity = 105/147 (71.43%), Postives = 117/147 (79.59%), Query Frame = 0


Query: 1   MASSSGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVS 60
           MASSSG SSGS N G        D E ERKRRRMQSNRESARRSRLRK+KHLDDLT+QVS
Sbjct: 1   MASSSGVSSGSTNGGIRPSRSEDDLEEERKRRRMQSNRESARRSRLRKQKHLDDLTNQVS 60

Query: 61  RLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLE-T 120
           RL+NHNNEM  NM V  +LC+SLE ENSIL AQ+ ELT+RL+SLN+I+  I S+EVLE T
Sbjct: 61  RLRNHNNEMTTNMTVTMSLCISLEGENSILEAQILELTNRLKSLNNIIKLIESMEVLEKT 120

Query: 121 FS---DDLNNGFEDEDYYNPWRYPFAN 136
           FS   DDLNN FE+EDY NPWRYPFAN
Sbjct: 121 FSCEIDDLNNDFEEEDYCNPWRYPFAN 147

[Close]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL
Match: A0A6J1BTZ6 (bZIP transcription factor 44-like OS=Momordica charantia OX=3673 GN=LOC111005751 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.5e-39
Identity = 101/143 (70.63%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 1   MASSSGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVS 60
           MASSSG SSGS N G        DQE ERKRRRMQSNRESARRSRLRK+KHLDDLT Q++
Sbjct: 1   MASSSGGSSGSGNGGRRSSGSEEDQEAERKRRRMQSNRESARRSRLRKQKHLDDLTAQIT 60

Query: 61  RLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETF 120
           RL NH N++VANMN AANLCVSLE ENSILRAQM ELTHRLQ LNDIV F+ S+     F
Sbjct: 61  RLMNHKNQIVANMNAAANLCVSLETENSILRAQMTELTHRLQYLNDIVTFVESMTAGGDF 120

Query: 121 SDDLNNGFEDEDYYNPWRYPFAN 136
               NNGF++EDYY PW  PFAN
Sbjct: 121 G---NNGFDEEDYY-PWDSPFAN 139

[Close]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL
Match: A0A6J1IN32 (bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111478515 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.3e-38
Identity = 99/123 (80.49%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MASSSGASSGSANCGDQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNNE 60
           M SS GASSGS +  D+EV+RKRRRMQSNRESARRSRLRK+KHLDDLT+QVSRL+N+N+E
Sbjct: 1   MGSSGGASSGSEH--DREVKRKRRRMQSNRESARRSRLRKQKHLDDLTEQVSRLRNYNHE 60

Query: 61  MVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETFSDDLN-NG 120
           MVA++NVAANLCVSLEAENSILRAQ+AELT RLQSLNDIVMFINS EV ETF D  + NG
Sbjct: 61  MVASLNVAANLCVSLEAENSILRAQIAELTRRLQSLNDIVMFINSTEVFETFLDVGDFNG 120

Query: 121 FED 123
           FED
Sbjct: 121 FED 121

[Close]

BLAST of Lsi01G006440 vs. NCBI nr
Match: XP_038883239.1 (bZIP transcription factor 44-like isoform X2 [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 114/140 (81.43%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 1   MASSSGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVS 60
           MASSSGASSGSAN G        DQE ERKRRRMQSNRESARRSRLRK+KHLDDLTDQV+
Sbjct: 1   MASSSGASSGSANGGIRTSGSEDDQEAERKRRRMQSNRESARRSRLRKQKHLDDLTDQVN 60

Query: 61  RLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETF 120
           RLK HNNEMVANMNVA NL VSLE ENSILR QM ELT+RLQSLNDIVMFINS+EV ETF
Sbjct: 61  RLKKHNNEMVANMNVATNLYVSLEVENSILRTQMLELTYRLQSLNDIVMFINSMEVFETF 120

Query: 121 S---DDLNNGFEDED-YYNP 129
           S   DDLNNGFE+ED YYNP
Sbjct: 121 SFEVDDLNNGFEEEDYYYNP 140

[Close]

BLAST of Lsi01G006440 vs. NCBI nr
Match: XP_038883238.1 (bZIP transcription factor 11-like isoform X1 [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 7.9e-43
Identity = 110/136 (80.88%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 5   SGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKN 64
           SGASSGSAN G        DQE ERKRRRMQSNRESARRSRLRK+KHLDDLTDQV+RLK 
Sbjct: 41  SGASSGSANGGIRTSGSEDDQEAERKRRRMQSNRESARRSRLRKQKHLDDLTDQVNRLKK 100

Query: 65  HNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETFS--- 124
           HNNEMVANMNVA NL VSLE ENSILR QM ELT+RLQSLNDIVMFINS+EV ETFS   
Sbjct: 101 HNNEMVANMNVATNLYVSLEVENSILRTQMLELTYRLQSLNDIVMFINSMEVFETFSFEV 160

Query: 125 DDLNNGFEDED-YYNP 129
           DDLNNGFE+ED YYNP
Sbjct: 161 DDLNNGFEEEDYYYNP 176

[Close]

BLAST of Lsi01G006440 vs. NCBI nr
Match: XP_008440768.1 (PREDICTED: bZIP transcription factor 53-like [Cucumis melo] >KAA0025714.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa] >TYK12588.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 5.1e-42
Identity = 105/148 (70.95%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 1   MASSSGASSGSANCG---------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQV 60
           MASSSG SSGS N G         D EVERKRRRMQSNRE+ARRSR+RK+KHLDDLTDQ+
Sbjct: 1   MASSSGVSSGSTNGGIRPSIGSEDDLEVERKRRRMQSNREAARRSRIRKQKHLDDLTDQI 60

Query: 61  SRLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLE- 120
           S+LKNHNNEM  NM +  +LC+SLEAENSIL AQ AELT+RL+SLN I+ FI S+EVLE 
Sbjct: 61  SQLKNHNNEMATNMTLMMSLCISLEAENSILLAQTAELTNRLKSLNSIIKFIESMEVLEK 120

Query: 121 TFS---DDLNNGFEDEDYYNPWRYPFAN 136
           TFS   +D NNGFE+EDY NPWRYPFAN
Sbjct: 121 TFSYEIEDFNNGFEEEDYCNPWRYPFAN 148

[Close]

BLAST of Lsi01G006440 vs. NCBI nr
Match: XP_004149987.1 (bZIP transcription factor 44 [Cucumis sativus] >KGN48871.1 hypothetical protein Csa_002932 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 4.3e-41
Identity = 105/147 (71.43%), Postives = 117/147 (79.59%), Query Frame = 0


Query: 1   MASSSGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVS 60
           MASSSG SSGS N G        D E ERKRRRMQSNRESARRSRLRK+KHLDDLT+QVS
Sbjct: 1   MASSSGVSSGSTNGGIRPSRSEDDLEEERKRRRMQSNRESARRSRLRKQKHLDDLTNQVS 60

Query: 61  RLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLE-T 120
           RL+NHNNEM  NM V  +LC+SLE ENSIL AQ+ ELT+RL+SLN+I+  I S+EVLE T
Sbjct: 61  RLRNHNNEMTTNMTVTMSLCISLEGENSILEAQILELTNRLKSLNNIIKLIESMEVLEKT 120

Query: 121 FS---DDLNNGFEDEDYYNPWRYPFAN 136
           FS   DDLNN FE+EDY NPWRYPFAN
Sbjct: 121 FSCEIDDLNNDFEEEDYCNPWRYPFAN 147

[Close]

BLAST of Lsi01G006440 vs. NCBI nr
Match: XP_022133066.1 (bZIP transcription factor 44-like [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 101/143 (70.63%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 1   MASSSGASSGSANCG--------DQEVERKRRRMQSNRESARRSRLRKKKHLDDLTDQVS 60
           MASSSG SSGS N G        DQE ERKRRRMQSNRESARRSRLRK+KHLDDLT Q++
Sbjct: 1   MASSSGGSSGSGNGGRRSSGSEEDQEAERKRRRMQSNRESARRSRLRKQKHLDDLTAQIT 60

Query: 61  RLKNHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINSVEVLETF 120
           RL NH N++VANMN AANLCVSLE ENSILRAQM ELTHRLQ LNDIV F+ S+     F
Sbjct: 61  RLMNHKNQIVANMNAAANLCVSLETENSILRAQMTELTHRLQYLNDIVTFVESMTAGGDF 120

Query: 121 SDDLNNGFEDEDYYNPWRYPFAN 136
               NNGF++EDYY PW  PFAN
Sbjct: 121 G---NNGFDEEDYY-PWDSPFAN 139

[Close]

BLAST of Lsi01G006440 vs. TAIR 10
Match: AT1G75390.1 (basic leucine-zipper 44 )

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-20
Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 4   SSGASSGSANCGDQE--------VERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLK 63
           SS +++G AN G +          ERKR+R QSNRESARRSR+RK+KHLDDLT QV+ L+
Sbjct: 16  SSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLR 75

Query: 64  NHNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
             N ++VA + V     V++EAEN ILRAQ+ EL HRLQSLN+IV F+ S
Sbjct: 76  KENAQIVAGIAVTTQHYVTIEAENDILRAQVLELNHRLQSLNEIVDFVES 125

[Close]

BLAST of Lsi01G006440 vs. TAIR 10
Match: AT4G34590.1 (G-box binding factor 6 )

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19
Identity = 58/109 (53.21%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 2   ASSSGASSGS--ANCGDQE---VERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKN 61
           +SSSG +S +   + G +E    +RKR+RM SNRESARRSR++K+K LDDLT QV+ LK 
Sbjct: 3   SSSSGTTSSTIQTSSGSEESLMEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQVNHLKK 62

Query: 62  HNNEMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
            N E+V ++++     +++EAENS+LRAQ+ EL HRLQSLNDI+ F++S
Sbjct: 63  ENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDS 111

[Close]

BLAST of Lsi01G006440 vs. TAIR 10
Match: AT2G18160.1 (basic leucine-zipper 2 )

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-19
Identity = 56/106 (52.83%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 3   SSSGASSGSANCGDQEV---ERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNN 62
           SSS +  G+ N  D  V   ERKR+RM SNRESARRSR+RK+KH+DDLT Q+++L N N 
Sbjct: 10  SSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNR 69

Query: 63  EMVANMNVAANLCVSLEAENSILRAQMAELTHRLQSLNDIVMFINS 106
           +++ ++ V + L + ++AENS+L AQM EL+ RLQSLN+IV  + S
Sbjct: 70  QILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQS 115

[Close]

BLAST of Lsi01G006440 vs. TAIR 10
Match: AT3G62420.1 (basic region/leucine zipper motif 53 )

HSP 1 Score: 77.8 bits (190), Expect = 7.5e-15
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 20  ERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLKNHNNEMVANMNVAANLCVSLEAEN 79
           ERKR+RM SNRESARRSR+RK+K L DL ++V+ LKN N ++   ++ A+   + +E++N
Sbjct: 24  ERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQVDEASKKYIEMESKN 83

Query: 80  SILRAQMAELTHRLQSLNDIVMFINSVEVLETFSDDLNNGFEDEDYYNPWRYP 133
           ++LRAQ +ELT RL+SLN ++  +  +         L+     E   NPW+ P
Sbjct: 84  NVLRAQASELTDRLRSLNSVLEMVEEIS-----GQALDIPEIPESMQNPWQMP 131

[Close]

BLAST of Lsi01G006440 vs. TAIR 10
Match: AT1G75390.2 (basic leucine-zipper 44 )

HSP 1 Score: 71.6 bits (174), Expect = 5.3e-13
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 4   SSGASSGSANCGDQE--------VERKRRRMQSNRESARRSRLRKKKHLDDLTDQVSRLK 63
           SS +++G AN G +          ERKR+R QSNRESARRSR+RK+KHLDDLT QV+ L+
Sbjct: 16  SSVSTTGLANSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLR 75

Query: 64  NHNNEMVANMNVAANLCVSLEAENSILRAQ 86
             N ++VA + V     V++EAEN ILRAQ
Sbjct: 76  KENAQIVAGIAVTTQHYVTIEAENDILRAQ 105

The following BLAST results are available for this feature:

BLAST of Lsi01G006440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0Z2L5	4.9e-19	55.45	bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1	[more]
O65683	3.2e-18	53.21	bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1	[more]
Q9SI15	7.0e-18	52.83	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]
Q9LZP8	1.0e-13	42.48	bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1	[more]
P24068	1.3e-11	36.57	Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2	[more]

BLAST of Lsi01G006440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CN59	2.5e-42	70.95	BZIP transcription factor 53-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B1Y1	2.5e-42	70.95	bZIP transcription factor 53-like OS=Cucumis melo OX=3656 GN=LOC103485085 PE=4 S...	[more]
A0A0A0KMA4	2.1e-41	71.43	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504520 PE=4 S...	[more]
A0A6J1BTZ6	7.5e-39	70.63	bZIP transcription factor 44-like OS=Momordica charantia OX=3673 GN=LOC111005751...	[more]
A0A6J1IN32	8.3e-38	80.49	bZIP transcription factor 44-like OS=Cucurbita maxima OX=3661 GN=LOC111478515 PE...	[more]

BLAST of Lsi01G006440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883239.1	1.4e-44	81.43	bZIP transcription factor 44-like isoform X2 [Benincasa hispida]	[more]
XP_038883238.1	7.9e-43	80.88	bZIP transcription factor 11-like isoform X1 [Benincasa hispida]	[more]
XP_008440768.1	5.1e-42	70.95	PREDICTED: bZIP transcription factor 53-like [Cucumis melo] >KAA0025714.1 bZIP t...	[more]
XP_004149987.1	4.3e-41	71.43	bZIP transcription factor 44 [Cucumis sativus] >KGN48871.1 hypothetical protein ...	[more]
XP_022133066.1	1.5e-38	70.63	bZIP transcription factor 44-like [Momordica charantia]	[more]

BLAST of Lsi01G006440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75390.1	3.5e-20	55.45	basic leucine-zipper 44	[more]
AT4G34590.1	2.2e-19	53.21	G-box binding factor 6	[more]
AT2G18160.1	5.0e-19	52.83	basic leucine-zipper 2	[more]
AT3G62420.1	7.5e-15	42.48	basic region/leucine zipper motif 53	[more]
AT1G75390.2	5.3e-13	53.33	basic leucine-zipper 44	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	COILS	Coil	Coil	coord: 72..99
None	No IPR available	GENE3D	1.20.5.170		coord: 19..73 e-value: 8.3E-12 score: 46.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR45764	BZIP TRANSCRIPTION FACTOR 44	coord: 16..134
None	No IPR available	PANTHER	PTHR45764:SF54	BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATED	coord: 16..134
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 22..72 e-value: 2.18617E-16 score: 66.0182
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 21..73
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 17..81 e-value: 1.5E-13 score: 61.0
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 21..79 e-value: 6.3E-11 score: 42.2
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 24..39
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 19..61 score: 9.886681

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G006440.1	Lsi01G006440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding