Lsi01G006130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G006130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	auxin-responsive protein SAUR50
Location	chr01: 4918118 .. 4918441 (+)
RNA-Seq Expression	Lsi01G006130
Synteny	Lsi01G006130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCAGAAAGGCTAATCTACTTCAGCCCTCTGCCTCCTTTAAACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAATGGCTGCAATGAAGATGGTCTCCCCGACGATGTCCCGAAAGGCCATTTCGCCGTCTACGTCGGAGAAAACCGAAGCCGATACATTGTTCCGATATCGTGGCTCTCTCATCCAGAGTTCCAAAGGCTGCTGCAGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGACATGGGAATCACTATCCCTTGTGAAGAAGTTGTTTTTCGCTCCTTAACTGCTATGATTAAGATCAGATGA

mRNA sequence

ATGGCTATCAGAAAGGCTAATCTACTTCAGCCCTCTGCCTCCTTTAAACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAATGGCTGCAATGAAGATGGTCTCCCCGACGATGTCCCGAAAGGCCATTTCGCCGTCTACGTCGGAGAAAACCGAAGCCGATACATTGTTCCGATATCGTGGCTCTCTCATCCAGAGTTCCAAAGGCTGCTGCAGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGACATGGGAATCACTATCCCTTGTGAAGAAGTTGTTTTTCGCTCCTTAACTGCTATGATTAAGATCAGATGA

Coding sequence (CDS)

ATGGCTATCAGAAAGGCTAATCTACTTCAGCCCTCTGCCTCCTTTAAACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAATGGCTGCAATGAAGATGGTCTCCCCGACGATGTCCCGAAAGGCCATTTCGCCGTCTACGTCGGAGAAAACCGAAGCCGATACATTGTTCCGATATCGTGGCTCTCTCATCCAGAGTTCCAAAGGCTGCTGCAGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGACATGGGAATCACTATCCCTTGTGAAGAAGTTGTTTTTCGCTCCTTAACTGCTATGATTAAGATCAGATGA

Protein sequence

MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR

Homology

[Close]

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-36
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 3   IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPI 62
           ++K + L  +A  K ILKRCSS GK++  G +ED LP DVPKGHF VYVGENRSRYIVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 63  SWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 106
           S+L+HPEFQ LLQRAEEEFGF+HDMG+TIPC+E+VF++LT+MI+
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-33
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGEN 60
           MAI++++    S  AS K I+KRCSS  K    NGC    ED LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 106
           RSRYIVPISWL H EFQ LL+ AEEEFGF+HDMG+TIPC+EV FRSL +M +
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 3   IRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPIS 62
           IRK++    + + K I+K+CSSFGK +   ++ GLP+DVPKGHF VYVGE R+RYIVPIS
Sbjct: 4   IRKSHKQTQALAIKKIIKKCSSFGKNN---DDSGLPNDVPKGHFVVYVGERRNRYIVPIS 63

Query: 63  WLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMI 105
            L HP FQ LLQR+EEEFGFNHDMGI IPC+EV F S  +MI
Sbjct: 64  CLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 26  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHD 85
           G R  G  +     D PKG+ AVYVGE   R+++P+S+L+ P FQ LL +AEEEFG++H 
Sbjct: 2   GFRLPGIRKASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHP 61

Query: 86  M-GITIPCEEVVFRSLTAMI 105
           M G+TIPC E VF+ +T+ +
Sbjct: 62  MGGLTIPCSEDVFQCITSCL 81

[Close]

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 26  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHD 85
           G R  G  +     D PKG+ AVYVGE   R+++P+S+++ P FQ LL +AEEEFG++H 
Sbjct: 2   GFRLPGIRKASNAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHP 61

Query: 86  M-GITIPCEEVVFRSLTAMI 105
           M G+TIPC E VF+ +T  +
Sbjct: 62  MGGLTIPCSEEVFQRITCCL 81

[Close]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL
Match: A0A5D3CM97 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001420 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSLT+MIK R
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIKFR 107

[Close]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL
Match: A0A1S3B1Z6 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103485116 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSLT+MIK R
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIKFR 107

[Close]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL
Match: A0A6J1BXR8 (auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111005689 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.3e-49
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI++ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL HP+FQ LLQ AEEEFGF+HDMG+TIPCEEVVFRSLTAMIKIR
Sbjct: 61  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIKIR 106

[Close]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL
Match: A0A6J1IS43 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111478810 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+K NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVP
Sbjct: 1   MAIKKGNLLQPSASIRHILKRCSSFGKR-NGCNDDGLPDDVPKGHFAVYVGENRSRHIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 107
           ISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI
Sbjct: 61  ISWLAHPQFQSLLHRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 105

[Close]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL
Match: A0A6J1GFB5 (auxin-responsive protein SAUR50 OS=Cucurbita moschata OX=3662 GN=LOC111453663 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+K NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVP
Sbjct: 1   MAIKKGNLLQPSASIRHILKRCSSFGKR-NGCNDDGLPDDVPKGHFAVYVGENRSRHIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 107
           ISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI
Sbjct: 61  ISWLAHPQFQSLLHRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 105

[Close]

BLAST of Lsi01G006130 vs. NCBI nr
Match: XP_038883315.1 (auxin-responsive protein SAUR50 [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 8.7e-53
Identity = 101/107 (94.39%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+KANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHF VYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFPVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL+HP+FQ LLQRAEEEFGF+HDMGITIPCEEVVFRSLTAMIKIR
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFSHDMGITIPCEEVVFRSLTAMIKIR 107

[Close]

BLAST of Lsi01G006130 vs. NCBI nr
Match: KAE8647605.1 (hypothetical protein Csa_003512 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 99/107 (92.52%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSLT+MIKIR
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIKIR 107

[Close]

BLAST of Lsi01G006130 vs. NCBI nr
Match: XP_008440807.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0025685.1 auxin-induced protein 15A [Cucumis melo var. makuwa] >TYK12560.1 auxin-induced protein 15A [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 5.7e-52
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSLT+MIK R
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIKFR 107

[Close]

BLAST of Lsi01G006130 vs. NCBI nr
Match: XP_022132983.1 (auxin-responsive protein SAUR50 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI++ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR 108
           ISWL HP+FQ LLQ AEEEFGF+HDMG+TIPCEEVVFRSLTAMIKIR
Sbjct: 61  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIKIR 106

[Close]

BLAST of Lsi01G006130 vs. NCBI nr
Match: KAG6603919.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVP 60
           MAI+K+NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVP
Sbjct: 1   MAIKKSNLLQPSASIRHILKRCSSFGKR-NGCNDDGLPDDVPKGHFAVYVGENRSRHIVP 60

Query: 61  ISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 107
           ISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI
Sbjct: 61  ISWLAHPQFQSLLHRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKI 105

[Close]

BLAST of Lsi01G006130 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 154.5 bits (389), Expect = 5.0e-38
Identity = 75/105 (71.43%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIV 60
           MA+++++ L  +A  K ILKRCSS  K  N C +EDGLP DVPKGHF VYVGE RSRYIV
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAK--NQCYDEDGLPVDVPKGHFPVYVGEKRSRYIV 60

Query: 61  PISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMI 105
           PIS+L+HP+F+ LLQ+AEEEFGFNHDMG+TIPCEEVVFRSLT+MI
Sbjct: 61  PISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of Lsi01G006130 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 72/104 (69.23%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 3   IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPI 62
           ++K + L  +A  K ILKRCSS GK++  G +ED LP DVPKGHF VYVGENRSRYIVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 63  SWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 106
           S+L+HPEFQ LLQRAEEEFGF+HDMG+TIPC+E+VF++LT+MI+
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Lsi01G006130 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-37
Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSN---GCNEDGLPDDVPKGHFAVYVGENRSRY 60
           MA++KAN L  +A  K ILKRCSS GK+ +   G +E+G P +VPKGHF VYVGENR RY
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 61  IVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 106
           +VPIS+L+ PEFQ LLQ+AEEEFGF+HDMG+TIPCEEVVFRSLT+M++
Sbjct: 61  VVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Lsi01G006130 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 5.1e-35
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIV 60
           MA+++++ L  +A  K ILKRCSS GK+   C +E+GLP DVPKGHF VYVGE R+RYIV
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKKQ--CYDEEGLPLDVPKGHFPVYVGEKRTRYIV 60

Query: 61  PISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFRSLTAMIK 106
           PIS+L+HPEF  LLQ+AEEEFGF HDM G+TIPCEEVVF SLT+MI+
Sbjct: 61  PISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of Lsi01G006130 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 141.7 bits (356), Expect = 3.3e-34
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGEN 60
           MAI++++    S  AS K I+KRCSS  K    NGC    ED LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 106
           RSRYIVPISWL H EFQ LL+ AEEEFGF+HDMG+TIPC+EV FRSL +M +
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

The following BLAST results are available for this feature:

BLAST of Lsi01G006130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.6e-36	69.23	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	4.7e-33	64.29	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	1.5e-31	63.73	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	1.4e-16	48.75	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	4.0e-16	47.50	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Lsi01G006130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM97	2.7e-52	91.59	Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B1Z6	2.7e-52	91.59	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103485116 PE=3 SV=1	[more]
A0A6J1BXR8	6.3e-49	88.79	auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111005689 P...	[more]
A0A6J1IS43	1.1e-48	89.62	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111478810...	[more]
A0A6J1GFB5	1.1e-48	89.62	auxin-responsive protein SAUR50 OS=Cucurbita moschata OX=3662 GN=LOC111453663 PE...	[more]

BLAST of Lsi01G006130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883315.1	8.7e-53	94.39	auxin-responsive protein SAUR50 [Benincasa hispida]	[more]
KAE8647605.1	1.9e-52	92.52	hypothetical protein Csa_003512 [Cucumis sativus]	[more]
XP_008440807.1	5.7e-52	91.59	PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0025685.1 auxin-induced ...	[more]
XP_022132983.1	1.3e-48	88.79	auxin-responsive protein SAUR50 [Momordica charantia]	[more]
KAG6603919.1	1.7e-48	89.62	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi01G006130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21220.1	5.0e-38	71.43	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	1.1e-37	69.23	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	1.4e-37	67.59	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	5.1e-35	67.29	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	3.3e-34	64.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 27..104 e-value: 1.0E-29 score: 102.5
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 12..105
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 12..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G006130.1	Lsi01G006130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin