Lsi01G006110 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G006110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription initiation factor TFIID subunit 14b
Location	chr01: 4912442 .. 4914428 (+)
RNA-Seq Expression	Lsi01G006110
Synteny	Lsi01G006110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATATCGTAAGAACCTTCTTAAACCCTAACCCCCAATCAGTTCGGATTCGCGCGTTTGAGTTCAAAGAAACTGTAATCTGTGTATTGTGGTCAAATTGTCAGAGACTTAGAGGGCCAACTCAATGTCCGCTAGAAAACAAGGTGAAACGCCGGCCGACGAAGGTGGATCTGGCACGAAGCCACCGCGCATCAAAATCTCAAAATCCTCTGAAGGAAGCGATGCCAAGGTTCTCGTACTTTATATTTCTGGCTGTCTTGAAAAGTAGCTATTGTATATACTTCTCAGACTTATCCTCAGTTTCACTGATTTCTTACATTGGTACTCGTAGTTCAAGAGTCTTAATAGATAACGAAATCCTTGAGTTCTATGAGGGCATAAGTTTTCTAAATTGTTTATCTATGAATAATCTGTACCACATTGCACTAGCCCCATTTGATCTCATTGCATTTTCTACCAGTGTAGAATGCTAGCAGGAAGCTTAAAGACATGGAAATCTGTGTCCCAATAGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTGAGTTTCCATCCTTCAGGGGCTGTCTCATTTCCCCTCCTCCTTTCAGGCGTTTGGCTAACGAAGATTATCTAATTTCCCCTTTAGGTCACAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCATCCTAGCTTTAATAACCCAACAAGGGTGGTTGAATCGCCACCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGCGATAAACAATTAGATCTGTAAGTTATTGTTGTTATTTTCTTGTGGCGTTAATTGTGATTTTATCTAAAAGGCAAATCCTATTTTTACTATTTTAAATTATTATAGGTTTCACCATCTGAAGTTGTACCCTGAAGACGAGTCTGGTCCACAAACAACAAAGAAACCTGTTGTGGTGGAATCGTACAACGAAATTGTGTTTCCGGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTAGGCTTCCTACTGGTTTCAATCTACCTAATCCTGGTAATTATCTGTTATTTTGTATTTCCTACCTGCTGTTGCAGTTTCTAAGTTAATTCAATAATTGGGTATATGCAGCATCAATTGAAAATATGGCAGAAAGGGAGAGAGGCGACACCAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTACGAATATCTTGTTTTCTTAAATTCTTAGCTTCTAAATCATATTTTCTCCTATTTCTTAATCATTCTCTTTCTACCTGTTGAAATACTTTAGTTTCTAAAGAGAACAGACTTCTGGCTTTTTATTACAACAACACAATGTTTAGTGATTTTGTTAATATATGTCTGCATTTGTTTTTATAAGAGTCAATATACGTCTGTTTGATGGGCTTCTTCATCTTGTTGGTGGCAGTGTAATAATATGTCAAACTGTGGAAAATTGAAGTCTACTTATAATTGACATTTCCTAGACTTTGGTGGATTTATTGTGAACTTTGATATGAAGTATTTTTTATAAGAATATTGTTATGACTTATTAGTATGTAGTTCATTATGTACTTGTACCTGTTTCCTAGTTGACTTTGTGCCTATTGGTTCTGGTTACATGATGTGTTAGTTCCGAATTGATCATTATTAGCTTATTCTTTCTTTTCTGATTGCATGAGCAATAATCTATTGGAAGGCTCATGATTAGGGTTGTAGATTTTTGCATTAACAGTATGGTTGATCTGCTAGGTGCAAGCTCATATCGTCAAGTTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTTTCAAAGTCAACTGCTGGTTTTGAATTTACGTGA

mRNA sequence

GAAATATCGTAAGAACCTTCTTAAACCCTAACCCCCAATCAGTTCGGATTCGCGCGTTTGAGTTCAAAGAAACTGTAATCTGTGTATTGTGGTCAAATTGTCAGAGACTTAGAGGGCCAACTCAATGTCCGCTAGAAAACAAGGTGAAACGCCGGCCGACGAAGGTGGATCTGGCACGAAGCCACCGCGCATCAAAATCTCAAAATCCTCTGAAGGAAGCGATGCCAAGAATGCTAGCAGGAAGCTTAAAGACATGGAAATCTGTGTCCCAATAGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTCACAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCATCCTAGCTTTAATAACCCAACAAGGGTGGTTGAATCGCCACCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGCGATAAACAATTAGATCTGTTTCACCATCTGAAGTTGTACCCTGAAGACGAGTCTGGTCCACAAACAACAAAGAAACCTGTTGTGGTGGAATCGTACAACGAAATTGTGTTTCCGGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTAGGCTTCCTACTGGTTTCAATCTACCTAATCCTGCATCAATTGAAAATATGGCAGAAAGGGAGAGAGGCGACACCAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTGCAAGCTCATATCGTCAAGTTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTTTCAAAGTCAACTGCTGGTTTTGAATTTACGTGA

Coding sequence (CDS)

ATGTCCGCTAGAAAACAAGGTGAAACGCCGGCCGACGAAGGTGGATCTGGCACGAAGCCACCGCGCATCAAAATCTCAAAATCCTCTGAAGGAAGCGATGCCAAGAATGCTAGCAGGAAGCTTAAAGACATGGAAATCTGTGTCCCAATAGTCTGTGGAACCATCGCATTTTACCTTGGCAGGAAGGCCAGCGAGTCACAGTCACATAAATGGACAGTCTATGTGCGTGGTGCTACTAATGAGGATCTCGGGGTGGTGATAAAGAGAGTTGTGTTTCAGTTGCATCCTAGCTTTAATAACCCAACAAGGGTGGTTGAATCGCCACCTTTTGAGTTATCAGAATGTGGTTGGGGAGAATTTGAGATTGCCATCACACTTTTTTTCCACAGCGACGTCTGCGATAAACAATTAGATCTGTTTCACCATCTGAAGTTGTACCCTGAAGACGAGTCTGGTCCACAAACAACAAAGAAACCTGTTGTGGTGGAATCGTACAACGAAATTGTGTTTCCGGATCCATCCGAAATTTTTTTCTCTCGTGTTCAGAATCATCCAGCTGTTGTTGTGCCTAGGCTTCCTACTGGTTTCAATCTACCTAATCCTGCATCAATTGAAAATATGGCAGAAAGGGAGAGAGGCGACACCAAGGATCATCCCCTTAGTCAATGGTTCCTGAATTTCTCAGAGGCAGACGAGCTGTTAAAACTTGCAGCTGCTCGCCAACAAGTGCAAGCTCATATCGTCAAGTTGAGAAGACAACTCAGTGTGATGGATGGACTGCCTCAGTTTTCAAAGTCAACTGCTGGTTTTGAATTTACGTGA

Protein sequence

MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT

Homology

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BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot
Match: Q9FH40 (Transcription initiation factor TFIID subunit 14b OS=Arabidopsis thaliana OX=3702 GN=TAF14B PE=1 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.5e-99
Identity = 175/265 (66.04%), Postives = 213/265 (80.38%), Query Frame = 0


Query: 2   SARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLGR 61
           S++KQ +   +      K  + K++KS E        +KLKD+EI VPIV G +AF+LG+
Sbjct: 6   SSKKQAQDQPETSEPTLKSLKTKMTKSDE------KQKKLKDIEISVPIVYGNVAFWLGK 65

Query: 62  KASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFE 121
           KASE QSHKW VYVRGATNED+ VV+K+VVFQLH SFN+PTRV+E PPFE+SE GWGEFE
Sbjct: 66  KASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSFNSPTRVIEEPPFEVSESGWGEFE 125

Query: 122 IAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSRV 181
           IA+TL FHSDVCDK L L+HHLKLYPEDESGP T KKPVVVESY+EIVFPDPSE F +RV
Sbjct: 126 IAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKKPVVVESYDEIVFPDPSESFLARV 185

Query: 182 QNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAARQ 241
           QNHPA+  PRLP+G+NLP P  +E+  +++RGDTKDH L QWF++FSEADELL+LAAARQ
Sbjct: 186 QNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDHSLGQWFMSFSEADELLQLAAARQ 245

Query: 242 QVQAHIVKLRRQLSVMDGLPQFSKS 267
           QVQAHI KLRRQ+S+++G  Q  K+
Sbjct: 246 QVQAHIAKLRRQISLLEGQNQTVKT 264

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BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot
Match: F4IPK2 (Transcription initiation factor TFIID subunit 14 OS=Arabidopsis thaliana OX=3702 GN=TAF14 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.0e-89
Identity = 153/239 (64.02%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 35  KNASRKLKDMEICVPIVCGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQL 94
           +N  R++KD+E+ VPIVCG+IAFYLG+KA+E ++HKWTVYVRGATNEDLGVVIKRV+F L
Sbjct: 29  ENGRRRIKDVEVYVPIVCGSIAFYLGKKATEYRTHKWTVYVRGATNEDLGVVIKRVIFHL 88

Query: 95  HPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESG-- 154
           HPSFNNPTRVV++PPF LSECGWGEF+I IT+FFH+DVC+K+L+L H LKL PE+  G  
Sbjct: 89  HPSFNNPTRVVDAPPFALSECGWGEFKIDITVFFHTDVCEKKLELSHVLKLNPENAYGPI 148

Query: 155 PQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVPRLPTGFNLPNPASIENMAERER 214
           P++ K PVV ESYNE+VFPDP E F +RV NHPA+ +  +P G NLP P   +     E+
Sbjct: 149 PKSIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPPGVADTYYLMEK 208

Query: 215 GDTKDHPLSQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFE 272
           GDTK+HPLS WFL FSE +EL KL AARQ+VQA I KL+RQL ++DG P+  +S++G+E
Sbjct: 209 GDTKEHPLSPWFLKFSEVEELFKLTAARQKVQADIAKLKRQLIMVDGQPEGLESSSGYE 267

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BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot
Match: Q755P0 (Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=YAF9 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 63/158 (39.87%), Postives = 100/158 (63.29%), Query Frame = 0


Query: 38  SRKLKDMEICVPIVCGTIAFYLG----RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQ 97
           ++++K + +  PIV G  A  +G      A    +H WT++VRG   ED+   IK+VVF+
Sbjct: 6   AKRIKTLSVARPIVYGNTAKKMGDVRPAIAPSEHTHMWTIFVRGPQGEDISYFIKKVVFK 65

Query: 98  LHPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYP-EDESG 157
           LH ++ NP RVV++PPFEL+E GWGEFEI + + F  +  +K L+ +HHL+L+P  +E G
Sbjct: 66  LHETYPNPVRVVDAPPFELTETGWGEFEINVKVHFVDEANEKMLNFYHHLRLHPYTEEDG 125

Query: 158 PQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVP 191
            ++    V    Y+EIVF +P+E FF+++   P  ++P
Sbjct: 126 RRSDGDEVSSVFYDEIVFNEPNEAFFAKMIEQPGNLLP 163

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BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot
Match: O95619 (YEATS domain-containing protein 4 OS=Homo sapiens OX=9606 GN=YEATS4 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 40  KLKDMEICVPIVCGTIAFYLGRKASE-SQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSF 99
           ++K + I  PIV G +A Y G+K  E   +H+WTVYV+   NED+   +K++ F+LH S+
Sbjct: 15  RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query: 100 NNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKK 159
            NP RVV  PP+E++E GWGEFEI I +FF  D  ++ + L+H LKL+  D +     KK
Sbjct: 75  GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 134

Query: 160 PVVVESYNEIVFPDPS 175
            VV E Y+E++F DP+
Sbjct: 135 TVVSEFYDEMIFQDPT 148

[Close]

BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot
Match: Q9CR11 (YEATS domain-containing protein 4 OS=Mus musculus OX=10090 GN=Yeats4 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 40  KLKDMEICVPIVCGTIAFYLGRKASE-SQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSF 99
           ++K + I  PIV G +A Y G+K  E   +H+WTVYV+   NED+   +K++ F+LH S+
Sbjct: 15  RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query: 100 NNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKK 159
            NP RVV  PP+E++E GWGEFEI I +FF  D  ++ + L+H LKL+  D +     KK
Sbjct: 75  GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 134

Query: 160 PVVVESYNEIVFPDPS 175
            VV E Y+E++F DP+
Sbjct: 135 TVVSEFYDEMIFQDPT 148

[Close]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL
Match: A0A5A7SJ54 (Transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001410 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 266/276 (96.38%), Postives = 268/276 (97.10%), Query Frame = 0


Query: 1   MSARKQGETPADEGG---SGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60
           MS RKQGE PADEGG   SG KPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF
Sbjct: 1   MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60

Query: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120
           YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW
Sbjct: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120

Query: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180
           GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF
Sbjct: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180

Query: 181 FSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLA 240
           FSRVQNHPAVVVPRLP GFNLPNPASIENMAERE+GDTKDHPLSQWFLNFSEADELLKLA
Sbjct: 181 FSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHPLSQWFLNFSEADELLKLA 240

Query: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           AARQQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 276

[Close]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL
Match: A0A1S3B2R3 (transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485117 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 266/276 (96.38%), Postives = 268/276 (97.10%), Query Frame = 0


Query: 1   MSARKQGETPADEGG---SGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60
           MS RKQGE PADEGG   SG KPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF
Sbjct: 1   MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60

Query: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120
           YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW
Sbjct: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120

Query: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180
           GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF
Sbjct: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180

Query: 181 FSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLA 240
           FSRVQNHPAVVVPRLP GFNLPNPASIENMAERE+GDTKDHPLSQWFLNFSEADELLKLA
Sbjct: 181 FSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHPLSQWFLNFSEADELLKLA 240

Query: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           AARQQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 276

[Close]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL
Match: A0A6J1IV07 (transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478805 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.6e-149
Identity = 260/273 (95.24%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60
           MSARKQGETPADEGGSGTKPPRIKISKSS+  DAKN S++LKDMEICVPIVCGTIAFYLG
Sbjct: 1   MSARKQGETPADEGGSGTKPPRIKISKSSDAGDAKNVSKRLKDMEICVPIVCGTIAFYLG 60

Query: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120
           RKASESQSHKWTVYVRGATNEDLGVVIK+VVFQLHPSFNNPTRVVESPPFELSECGWGEF
Sbjct: 61  RKASESQSHKWTVYVRGATNEDLGVVIKKVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120

Query: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSR 180
           EIA+TLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFF+R
Sbjct: 121 EIAVTLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFAR 180

Query: 181 VQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240
           VQNHPAVVVPRLP GFNLPNPA IENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR
Sbjct: 181 VQNHPAVVVPRLPAGFNLPNPAPIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240

Query: 241 QQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           QQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 QQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 273

[Close]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL
Match: A0A0A0KJC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505820 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 263/276 (95.29%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MSARKQGETPADEGG---SGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60
           MS RKQGE PADEGG   SG KPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF
Sbjct: 1   MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60

Query: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120
           YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRV+ESPPFELSE GW
Sbjct: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVIESPPFELSESGW 120

Query: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180
           GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF
Sbjct: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180

Query: 181 FSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLA 240
           FSRVQNHPAVVVPRLP GFNLPNPASIENMAERE+GDTKDH LSQWFLNFSEADELLKLA
Sbjct: 181 FSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHSLSQWFLNFSEADELLKLA 240

Query: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           AARQQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 276

[Close]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL
Match: A0A6J1GH06 (transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453821 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.4e-147
Identity = 257/273 (94.14%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 1   MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60
           MS RKQGETPADEGGSGTKPPRIKISKSS+  DAKN S++LKDMEICVPIVCGTIAFYLG
Sbjct: 1   MSGRKQGETPADEGGSGTKPPRIKISKSSDAGDAKNVSKRLKDMEICVPIVCGTIAFYLG 60

Query: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120
           RKASESQSHKWTVYVRGATNEDLGVVIK+VVFQLHPSFNNPTRVVESPPFELSECGWGEF
Sbjct: 61  RKASESQSHKWTVYVRGATNEDLGVVIKKVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120

Query: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSR 180
           EIA+TLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSE FF+R
Sbjct: 121 EIAVTLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSENFFAR 180

Query: 181 VQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240
           VQN+PAVVVPRLP GFNLPNPA IENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR
Sbjct: 181 VQNYPAVVVPRLPAGFNLPNPAPIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240

Query: 241 QQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           QQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 QQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 273

[Close]

BLAST of Lsi01G006110 vs. NCBI nr
Match: XP_038881078.1 (transcription initiation factor TFIID subunit 14b [Benincasa hispida])

HSP 1 Score: 544.7 bits (1402), Expect = 4.7e-151
Identity = 266/273 (97.44%), Postives = 269/273 (98.53%), Query Frame = 0


Query: 1   MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60
           MS RKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG
Sbjct: 1   MSGRKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60

Query: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120
           RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF
Sbjct: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120

Query: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSR 180
           EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSE FFSR
Sbjct: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSETFFSR 180

Query: 181 VQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240
           VQNHPAVVVPRLP GFNLPNPASI+N+AERERGDTKDHPLSQWFLNFSEADELLKLAAAR
Sbjct: 181 VQNHPAVVVPRLPAGFNLPNPASIDNIAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240

Query: 241 QQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           QQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 QQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 273

[Close]

BLAST of Lsi01G006110 vs. NCBI nr
Match: XP_008440809.1 (PREDICTED: transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo] >KAA0025684.1 transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo var. makuwa] >TYK12559.1 transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 538.9 bits (1387), Expect = 2.6e-149
Identity = 266/276 (96.38%), Postives = 268/276 (97.10%), Query Frame = 0


Query: 1   MSARKQGETPADEGG---SGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60
           MS RKQGE PADEGG   SG KPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF
Sbjct: 1   MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60

Query: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120
           YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW
Sbjct: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120

Query: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180
           GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF
Sbjct: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180

Query: 181 FSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLA 240
           FSRVQNHPAVVVPRLP GFNLPNPASIENMAERE+GDTKDHPLSQWFLNFSEADELLKLA
Sbjct: 181 FSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHPLSQWFLNFSEADELLKLA 240

Query: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           AARQQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 276

[Close]

BLAST of Lsi01G006110 vs. NCBI nr
Match: XP_022979048.1 (transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 537.3 bits (1383), Expect = 7.5e-149
Identity = 260/273 (95.24%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60
           MSARKQGETPADEGGSGTKPPRIKISKSS+  DAKN S++LKDMEICVPIVCGTIAFYLG
Sbjct: 1   MSARKQGETPADEGGSGTKPPRIKISKSSDAGDAKNVSKRLKDMEICVPIVCGTIAFYLG 60

Query: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120
           RKASESQSHKWTVYVRGATNEDLGVVIK+VVFQLHPSFNNPTRVVESPPFELSECGWGEF
Sbjct: 61  RKASESQSHKWTVYVRGATNEDLGVVIKKVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120

Query: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSR 180
           EIA+TLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFF+R
Sbjct: 121 EIAVTLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFAR 180

Query: 181 VQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240
           VQNHPAVVVPRLP GFNLPNPA IENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR
Sbjct: 181 VQNHPAVVVPRLPAGFNLPNPAPIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240

Query: 241 QQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           QQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 QQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 273

[Close]

BLAST of Lsi01G006110 vs. NCBI nr
Match: XP_023544997.1 (transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534.6 bits (1376), Expect = 4.8e-148
Identity = 259/273 (94.87%), Postives = 266/273 (97.44%), Query Frame = 0


Query: 1   MSARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLG 60
           MSARKQGETPADEGGSGTKPPRIKISKSS+  DAKN S++LKDMEICVPIVCGTIAFYLG
Sbjct: 1   MSARKQGETPADEGGSGTKPPRIKISKSSDAGDAKNVSKRLKDMEICVPIVCGTIAFYLG 60

Query: 61  RKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120
           RKASESQSHKWTVYVRGATNEDLGVVIK+VVFQLHPSFNNPTRVVESPPFELSECGWGEF
Sbjct: 61  RKASESQSHKWTVYVRGATNEDLGVVIKKVVFQLHPSFNNPTRVVESPPFELSECGWGEF 120

Query: 121 EIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSR 180
           EIA+TLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSE FF+R
Sbjct: 121 EIAVTLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSENFFAR 180

Query: 181 VQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240
           VQNHPAVVVPRLP GFNLPNPA IENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR
Sbjct: 181 VQNHPAVVVPRLPAGFNLPNPAPIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAAR 240

Query: 241 QQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           QQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 QQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 273

[Close]

BLAST of Lsi01G006110 vs. NCBI nr
Match: XP_004134869.1 (transcription initiation factor TFIID subunit 14b [Cucumis sativus] >KGN48904.1 hypothetical protein Csa_004327 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 4.1e-147
Identity = 263/276 (95.29%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   MSARKQGETPADEGG---SGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60
           MS RKQGE PADEGG   SG KPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF
Sbjct: 1   MSGRKQGEAPADEGGSGPSGNKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAF 60

Query: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGW 120
           YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRV+ESPPFELSE GW
Sbjct: 61  YLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVIESPPFELSESGW 120

Query: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180
           GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF
Sbjct: 121 GEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIF 180

Query: 181 FSRVQNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLA 240
           FSRVQNHPAVVVPRLP GFNLPNPASIENMAERE+GDTKDH LSQWFLNFSEADELLKLA
Sbjct: 181 FSRVQNHPAVVVPRLPAGFNLPNPASIENMAEREKGDTKDHSLSQWFLNFSEADELLKLA 240

Query: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFEFT 274
           AARQQVQAHIVKLRRQLSVMDGLPQFSK TAG+EFT
Sbjct: 241 AARQQVQAHIVKLRRQLSVMDGLPQFSKPTAGYEFT 276

[Close]

BLAST of Lsi01G006110 vs. TAIR 10
Match: AT5G45600.1 (YEATS family protein )

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-100
Identity = 175/265 (66.04%), Postives = 213/265 (80.38%), Query Frame = 0


Query: 2   SARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLGR 61
           S++KQ +   +      K  + K++KS E        +KLKD+EI VPIV G +AF+LG+
Sbjct: 6   SSKKQAQDQPETSEPTLKSLKTKMTKSDE------KQKKLKDIEISVPIVYGNVAFWLGK 65

Query: 62  KASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFE 121
           KASE QSHKW VYVRGATNED+ VV+K+VVFQLH SFN+PTRV+E PPFE+SE GWGEFE
Sbjct: 66  KASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSFNSPTRVIEEPPFEVSESGWGEFE 125

Query: 122 IAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSRV 181
           IA+TL FHSDVCDK L L+HHLKLYPEDESGP T KKPVVVESY+EIVFPDPSE F +RV
Sbjct: 126 IAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKKPVVVESYDEIVFPDPSESFLARV 185

Query: 182 QNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAARQ 241
           QNHPA+  PRLP+G+NLP P  +E+  +++RGDTKDH L QWF++FSEADELL+LAAARQ
Sbjct: 186 QNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDHSLGQWFMSFSEADELLQLAAARQ 245

Query: 242 QVQAHIVKLRRQLSVMDGLPQFSKS 267
           QVQAHI KLRRQ+S+++G  Q  K+
Sbjct: 246 QVQAHIAKLRRQISLLEGQNQTVKT 264

[Close]

BLAST of Lsi01G006110 vs. TAIR 10
Match: AT5G45600.2 (YEATS family protein )

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-100
Identity = 175/265 (66.04%), Postives = 213/265 (80.38%), Query Frame = 0


Query: 2   SARKQGETPADEGGSGTKPPRIKISKSSEGSDAKNASRKLKDMEICVPIVCGTIAFYLGR 61
           S++KQ +   +      K  + K++KS E        +KLKD+EI VPIV G +AF+LG+
Sbjct: 6   SSKKQAQDQPETSEPTLKSLKTKMTKSDE-------KKKLKDIEISVPIVYGNVAFWLGK 65

Query: 62  KASESQSHKWTVYVRGATNEDLGVVIKRVVFQLHPSFNNPTRVVESPPFELSECGWGEFE 121
           KASE QSHKW VYVRGATNED+ VV+K+VVFQLH SFN+PTRV+E PPFE+SE GWGEFE
Sbjct: 66  KASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSFNSPTRVIEEPPFEVSESGWGEFE 125

Query: 122 IAITLFFHSDVCDKQLDLFHHLKLYPEDESGPQTTKKPVVVESYNEIVFPDPSEIFFSRV 181
           IA+TL FHSDVCDK L L+HHLKLYPEDESGP T KKPVVVESY+EIVFPDPSE F +RV
Sbjct: 126 IAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKKPVVVESYDEIVFPDPSESFLARV 185

Query: 182 QNHPAVVVPRLPTGFNLPNPASIENMAERERGDTKDHPLSQWFLNFSEADELLKLAAARQ 241
           QNHPA+  PRLP+G+NLP P  +E+  +++RGDTKDH L QWF++FSEADELL+LAAARQ
Sbjct: 186 QNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDHSLGQWFMSFSEADELLQLAAARQ 245

Query: 242 QVQAHIVKLRRQLSVMDGLPQFSKS 267
           QVQAHI KLRRQ+S+++G  Q  K+
Sbjct: 246 QVQAHIAKLRRQISLLEGQNQTVKT 263

[Close]

BLAST of Lsi01G006110 vs. TAIR 10
Match: AT2G18000.2 (TBP-associated factor 14 )

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-90
Identity = 153/239 (64.02%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 35  KNASRKLKDMEICVPIVCGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQL 94
           +N  R++KD+E+ VPIVCG+IAFYLG+KA+E ++HKWTVYVRGATNEDLGVVIKRV+F L
Sbjct: 29  ENGRRRIKDVEVYVPIVCGSIAFYLGKKATEYRTHKWTVYVRGATNEDLGVVIKRVIFHL 88

Query: 95  HPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESG-- 154
           HPSFNNPTRVV++PPF LSECGWGEF+I IT+FFH+DVC+K+L+L H LKL PE+  G  
Sbjct: 89  HPSFNNPTRVVDAPPFALSECGWGEFKIDITVFFHTDVCEKKLELSHVLKLNPENAYGPI 148

Query: 155 PQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVPRLPTGFNLPNPASIENMAERER 214
           P++ K PVV ESYNE+VFPDP E F +RV NHPA+ +  +P G NLP P   +     E+
Sbjct: 149 PKSIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPPGVADTYYLMEK 208

Query: 215 GDTKDHPLSQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLSVMDGLPQFSKSTAGFE 272
           GDTK+HPLS WFL FSE +EL KL AARQ+VQA I KL+RQL ++DG P+  +S++G+E
Sbjct: 209 GDTKEHPLSPWFLKFSEVEELFKLTAARQKVQADIAKLKRQLIMVDGQPEGLESSSGYE 267

[Close]

BLAST of Lsi01G006110 vs. TAIR 10
Match: AT2G18000.1 (TBP-associated factor 14 )

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-67
Identity = 115/171 (67.25%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 35  KNASRKLKDMEICVPIVCGTIAFYLGRKASESQSHKWTVYVRGATNEDLGVVIKRVVFQL 94
           +N  R++KD+E+ VPIVCG+IAFYLG+KA+E ++HKWTVYVRGATNEDLGVVIKRV+F L
Sbjct: 29  ENGRRRIKDVEVYVPIVCGSIAFYLGKKATEYRTHKWTVYVRGATNEDLGVVIKRVIFHL 88

Query: 95  HPSFNNPTRVVESPPFELSECGWGEFEIAITLFFHSDVCDKQLDLFHHLKLYPEDESG-- 154
           HPSFNNPTRVV++PPF LSECGWGEF+I IT+FFH+DVC+K+L+L H LKL PE+  G  
Sbjct: 89  HPSFNNPTRVVDAPPFALSECGWGEFKIDITVFFHTDVCEKKLELSHVLKLNPENAYGPI 148

Query: 155 PQTTKKPVVVESYNEIVFPDPSEIFFSRVQNHPAVVVPRLPTGFNLPNPAS 204
           P++ K PVV ESYNE+VFPDP E F +RV NHPA+ +  +P G NLP P +
Sbjct: 149 PKSIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPPGA 199

The following BLAST results are available for this feature:

BLAST of Lsi01G006110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH40	2.5e-99	66.04	Transcription initiation factor TFIID subunit 14b OS=Arabidopsis thaliana OX=370...	[more]
F4IPK2	4.0e-89	64.02	Transcription initiation factor TFIID subunit 14 OS=Arabidopsis thaliana OX=3702...	[more]
Q755P0	1.5e-30	39.87	Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9...	[more]
O95619	3.0e-28	44.85	YEATS domain-containing protein 4 OS=Homo sapiens OX=9606 GN=YEATS4 PE=1 SV=1	[more]
Q9CR11	3.0e-28	44.85	YEATS domain-containing protein 4 OS=Mus musculus OX=10090 GN=Yeats4 PE=2 SV=1	[more]

BLAST of Lsi01G006110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJ54	1.2e-149	96.38	Transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo var...	[more]
A0A1S3B2R3	1.2e-149	96.38	transcription initiation factor TFIID subunit 14b isoform X3 OS=Cucumis melo OX=...	[more]
A0A6J1IV07	3.6e-149	95.24	transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita m...	[more]
A0A0A0KJC2	2.0e-147	95.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505820 PE=4 SV=1	[more]
A0A6J1GH06	3.4e-147	94.14	transcription initiation factor TFIID subunit 14b-like isoform X1 OS=Cucurbita m...	[more]

BLAST of Lsi01G006110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881078.1	4.7e-151	97.44	transcription initiation factor TFIID subunit 14b [Benincasa hispida]	[more]
XP_008440809.1	2.6e-149	96.38	PREDICTED: transcription initiation factor TFIID subunit 14b isoform X3 [Cucumis...	[more]
XP_022979048.1	7.5e-149	95.24	transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita max...	[more]
XP_023544997.1	4.8e-148	94.87	transcription initiation factor TFIID subunit 14b-like isoform X1 [Cucurbita pep...	[more]
XP_004134869.1	4.1e-147	95.29	transcription initiation factor TFIID subunit 14b [Cucumis sativus] >KGN48904.1 ...	[more]

BLAST of Lsi01G006110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45600.1	1.8e-100	66.04	YEATS family protein	[more]
AT5G45600.2	1.8e-100	66.04	YEATS family protein	[more]
AT2G18000.2	2.9e-90	64.02	TBP-associated factor 14	[more]
AT2G18000.1	1.2e-67	67.25	TBP-associated factor 14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038704	YEATS superfamily	GENE3D	2.60.40.1970	YEATS domain	coord: 41..194 e-value: 1.2E-49 score: 170.5
IPR005033	YEATS	PFAM	PF03366	YEATS	coord: 69..148 e-value: 1.9E-31 score: 107.9
IPR005033	YEATS	PANTHER	PTHR23195	YEATS DOMAIN	coord: 15..266
IPR005033	YEATS	PROSITE	PS51037	YEATS	coord: 40..184 score: 54.757896
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR23195:SF44	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B	coord: 15..266
None	No IPR available	CDD	cd16910	YEATS_TFIID14_like	coord: 46..177 e-value: 5.10284E-86 score: 250.96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G006110.1	Lsi01G006110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009959	negative gravitropism
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005634	nucleus