Lsi01G005310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G005310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein kinase domain-containing protein
Location	chr01: 4349013 .. 4350201 (-)
RNA-Seq Expression	Lsi01G005310
Synteny	Lsi01G005310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATGTTTTATTCTTATTTTTTTAAAAAAATAGTGAGAAGATTTGGTCAATATGTATAGGCCACAAGCATGTCGTCTAATTCTGACAACCGACGAGTAGTTAGTAGAGTTGACTTAACCAACTACCTGCGACCACATAACTCTTGTAAAAATAATCATGTTCCTGTGTTTATATGCACATATGGCGATGCCTGTCTATAGTACTACGGACGATGAGGAAATGATGGTTGGAAAGTTAAGGGAGCAGTTCTTTTGTTTGATAATGCTTTATCTTTACCAGCATTTTGAGCTTCATTTAGTTGATAACTATATGCAAGTAGCAAAAATATGAAAGGTACAAGTTTGATATTTCATTCCATTATCAAGTTTATGGTTATGGTCATGCATTTGAATTCTCCAATTTTCTGGTTTCAGGATCATCTTGCATTGATGATGGAACTCCTTGGGAAGATGCCTAGAAAAGTAAGTATATCACATCAAACTTCTCCTTATAGCTTCTTAATACCTCTCAGTTTCCATTTCTCATATGTTTGGCTTGACACCCAGATCGCGATAGGAGGAGCTCGATCGAAAGACTACTTCGACAGGCATGGGGACCTGAAAAGGATTCGGAGGCTTAAATTCTGGTCTCTCGATCGACTGCTAGTCGAGAAATATAAATTTTCAGAAGCTGATGCTCAATCTTTTGCTGAGTTTCTCTCTCTCATTCTCGATTTCGCACCAGAGAAGCGACCGACTGCTCAGCAATGCCTTCAGCATCCTTGGCTCAATCCTAGGAACTTACCTCAAGGCGAAATGAAGAATAAATCAGAGGTTGAAAAGGTGAATGTTGGTATGAGCAACCTCCAGATTAGAGTGGGAAAGTGAAGAAGACTGGATAGGCGGCGCCATTCGACTGTGGAGCAACACTATTTTCAGGTTCTTTCCTTTGTCTGACCGTCGACCGTAATTTTCGTCCCGATTACAGGTCCATTTTTTTGTTGTTTTTCAATGATTTGATTTTTTATTAACTAATATAGCATGTAAAAATTAGTATTGTTTTTCCAAGACATTGACATAAGAGAGTGAAATATTGACTACGGATATAGAAACTGTTGGTGGAATCAGGGATGTGCTCTAAACCACCCAAAAGATCACTACTGATATATATATATATATATATATATATATTTTTTTTTTTTTTTCTA

mRNA sequence

ATGTCATATTTGGTCAATATGTATAGGCCACAAGCATGTCGTCTAATTCTGACAACCGACGAGTATACTACGGACGATGAGGAAATGATGGTTGGAAAGTTAAGGGAGCAGTTCTTTTGTTTGATAATGCTTTATCTTTACCAGCATTTTGAGCTTCATTTAGTTGATAACTATATGCAACAAAAATATGAAAGGTACAAGTTTGATATTTCATTCCATTATCAAGTTTATGGTTATGGTCATGCATTTGAATTCTCCAATTTTCTGGATCATCTTGCATTGATGATGGAACTCCTTGGGAAGATGCCTAGAAAAATCGCGATAGGAGGAGCTCGATCGAAAGACTACTTCGACAGGCATGGGGACCTGAAAAGGATTCGGAGGCTTAAATTCTGGTCTCTCGATCGACTGCTAGTCGAGAAATATAAATTTTCAGAAGCTGATGCTCAATCTTTTGCTGAGTTTCTCTCTCTCATTCTCGATTTCGCACCAGAGAAGCGACCGACTGCTCAGCAATGCCTTCAGCATCCTTGGCTCAATCCTAGGAACTTACCTCAAGGCGAAATGAAGAATAAATCAGAGGTTGAAAAGGTGAATGTTGGTATGAGCAACCTCCAGATTAGAGTGGGAAAGTGAAGAAGACTGGATAGGCGGCGCCATTCGACTGTGGAGCAACACTATTTTCAGGTTCTTTCCTTTGTCTGACCGTCGACCGTAATTTTCGTCCCGATTACAGGTCCATTTTTTTGTTGTTTTTCAATGATTTGATTTTTTATTAACTAATATAGCATGTAAAAATTAGTATTGTTTTTCCAAGACATTGACATAAGAGAGTGAAATATTGACTACGGATATAGAAACTGTTGGTGGAATCAGGGATGTGCTCTAAACCACCCAAAAGATCACTACTGATATATATATATATATATATATATATATTTTTTTTTTTTTTTCTA

Coding sequence (CDS)

ATGTCATATTTGGTCAATATGTATAGGCCACAAGCATGTCGTCTAATTCTGACAACCGACGAGTATACTACGGACGATGAGGAAATGATGGTTGGAAAGTTAAGGGAGCAGTTCTTTTGTTTGATAATGCTTTATCTTTACCAGCATTTTGAGCTTCATTTAGTTGATAACTATATGCAACAAAAATATGAAAGGTACAAGTTTGATATTTCATTCCATTATCAAGTTTATGGTTATGGTCATGCATTTGAATTCTCCAATTTTCTGGATCATCTTGCATTGATGATGGAACTCCTTGGGAAGATGCCTAGAAAAATCGCGATAGGAGGAGCTCGATCGAAAGACTACTTCGACAGGCATGGGGACCTGAAAAGGATTCGGAGGCTTAAATTCTGGTCTCTCGATCGACTGCTAGTCGAGAAATATAAATTTTCAGAAGCTGATGCTCAATCTTTTGCTGAGTTTCTCTCTCTCATTCTCGATTTCGCACCAGAGAAGCGACCGACTGCTCAGCAATGCCTTCAGCATCCTTGGCTCAATCCTAGGAACTTACCTCAAGGCGAAATGAAGAATAAATCAGAGGTTGAAAAGGTGAATGTTGGTATGAGCAACCTCCAGATTAGAGTGGGAAAGTGA

Protein sequence

MSYLVNMYRPQACRLILTTDEYTTDDEEMMVGKLREQFFCLIMLYLYQHFELHLVDNYMQQKYERYKFDISFHYQVYGYGHAFEFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMSNLQIRVGK

Homology

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BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot
Match: Q96SB4 (SRSF protein kinase 1 OS=Homo sapiens OX=9606 GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-24
Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           E++   DH+AL++ELLGK+PRK+ + G  SK++F + GDLK I +LK W L  +LVEKY+
Sbjct: 558 EYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYE 617

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLN 181
           +S+ +A  F +FL  +L+  PEKR TA +CL+HPWLN
Sbjct: 618 WSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 654

[Close]

BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot
Match: Q5RD27 (SRSF protein kinase 1 OS=Pongo abelii OX=9601 GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-24
Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           E++   DH+AL++ELLGK+PRK+ + G  SK++F + GDLK I +LK W L  +LVEKY+
Sbjct: 558 EYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYE 617

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLN 181
           +S+ +A  F +FL  +L+  PEKR TA +CL+HPWLN
Sbjct: 618 WSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 654

[Close]

BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot
Match: O70551 (SRSF protein kinase 1 OS=Mus musculus OX=10090 GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-23
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DH+AL++ELLGK+PRK+ + G  SK++F + GDLK I +LK W L  +LVEKY++ + +A
Sbjct: 557 DHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEA 616

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLN 181
             F +FL  +L+  PEKR TA +CL+HPWLN
Sbjct: 617 AGFTDFLLPMLELMPEKRATAAECLRHPWLN 647

[Close]

BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot
Match: P78362 (SRSF protein kinase 2 OS=Homo sapiens OX=9606 GN=SRPK2 PE=1 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-21
Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DH+A ++ELLG +PR  A+ G  S+++F+R G+L+ I +LK WSL  +LVEKY 
Sbjct: 591 DYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYG 650

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLN 181
           +   DA  F +FL  +L+  PEKR +A +CL+HPWLN
Sbjct: 651 WPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 687

[Close]

BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot
Match: O54781 (SRSF protein kinase 2 OS=Mus musculus OX=10090 GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-21
Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DH+A ++ELLG +PR  A+ G  S+++F+R G+L+ I +LK WSL  +LVEKY 
Sbjct: 584 DYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYG 643

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLN 181
           +   DA  F +FL  +L+  PEKR +A +CL+HPWLN
Sbjct: 644 WPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 680

[Close]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL
Match: A0A5D3CLP2 (SRSF protein kinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00620 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.3e-61
Identity = 119/128 (92.97%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FSEADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 377 FSEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL
Match: A0A1S3B286 (SRSF protein kinase 1-like OS=Cucumis melo OX=3656 GN=LOC103485190 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.3e-61
Identity = 119/128 (92.97%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FSEADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 377 FSEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL
Match: A0A0A0KHJ5 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509620 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.9e-60
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           F+EADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 377 FTEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL
Match: A0A6J1BY46 (SRSF protein kinase 1 OS=Momordica charantia OX=3673 GN=LOC111005785 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.0e-58
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRK AIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKTAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FS+ADA+SFAEFLS ILDFAPEKRPTAQQCLQHPWLNPRNL Q E+KNKSEVEKVNVGMS
Sbjct: 377 FSDADARSFAEFLSSILDFAPEKRPTAQQCLQHPWLNPRNLAQSEVKNKSEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
           NLQIRVGK
Sbjct: 437 NLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL
Match: A0A6J1GG83 (SRSF protein kinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453657 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.2e-56
Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMP+KIAIGGARSKDYFDRHGDLKRIRRLKFWSLD+LLVEKYK
Sbjct: 316 DYSEDEDHLALMMELLGKMPKKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDKLLVEKYK 375

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
            SEADAQ+FAEFL  +LDFAPEKRPTAQQCLQHPWLNPRN+ Q E+KNKSEVEKVNVGMS
Sbjct: 376 LSEADAQAFAEFLCPLLDFAPEKRPTAQQCLQHPWLNPRNIAQNELKNKSEVEKVNVGMS 435

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 436 KLQIRVGK 443

[Close]

BLAST of Lsi01G005310 vs. NCBI nr
Match: XP_008440907.1 (PREDICTED: SRSF protein kinase 1-like [Cucumis melo] >KAA0025610.1 SRSF protein kinase 1-like [Cucumis melo var. makuwa] >TYK12485.1 SRSF protein kinase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 119/128 (92.97%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FSEADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 377 FSEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. NCBI nr
Match: KAE8647628.1 (hypothetical protein Csa_003762 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 3.8e-60
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 200 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 259

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           F+EADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 260 FTEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 319

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 320 KLQIRVGK 327

[Close]

BLAST of Lsi01G005310 vs. NCBI nr
Match: XP_004134827.1 (SRSF protein kinase 1 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 3.8e-60
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           F+EADAQSFAEFLSL+LDFAPEKRPTAQQCLQHPWLNPRNLPQ EMKNK+EVEKVNVGMS
Sbjct: 377 FTEADAQSFAEFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. NCBI nr
Match: XP_038882451.1 (SRSF protein kinase 1-like [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 3.2e-59
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FSEADAQ+FAEFL LILDFAPEKRPTAQQCLQHPWLNPR+LPQ E+KNKSEVEKVNVGMS
Sbjct: 377 FSEADAQAFAEFLCLILDFAPEKRPTAQQCLQHPWLNPRSLPQSEVKNKSEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
            LQIRVGK
Sbjct: 437 KLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. NCBI nr
Match: XP_022133108.1 (SRSF protein kinase 1 [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-58
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 84  EFSNFLDHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 143
           ++S   DHLALMMELLGKMPRK AIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK
Sbjct: 317 DYSEDEDHLALMMELLGKMPRKTAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYK 376

Query: 144 FSEADAQSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMS 203
           FS+ADA+SFAEFLS ILDFAPEKRPTAQQCLQHPWLNPRNL Q E+KNKSEVEKVNVGMS
Sbjct: 377 FSDADARSFAEFLSSILDFAPEKRPTAQQCLQHPWLNPRNLAQSEVKNKSEVEKVNVGMS 436

Query: 204 NLQIRVGK 212
           NLQIRVGK
Sbjct: 437 NLQIRVGK 444

[Close]

BLAST of Lsi01G005310 vs. TAIR 10
Match: AT2G17530.1 (Protein kinase superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLK+W LDRLL++KYK  EA+A
Sbjct: 326 DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEA 385

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMSNLQIR 209
           + FA+FL  I+DFAPEKRPTAQQCLQHPWLN R        N+ ++E     MSN+QI+
Sbjct: 386 REFADFLCPIMDFAPEKRPTAQQCLQHPWLNLRT-----QNNEDDIEG---QMSNMQIK 436

[Close]

BLAST of Lsi01G005310 vs. TAIR 10
Match: AT2G17530.3 (Protein kinase superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLK+W LDRLL++KYK  EA+A
Sbjct: 326 DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEA 385

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMSNLQIR 209
           + FA+FL  I+DFAPEKRPTAQQCLQHPWLN R        N+ ++E     MSN+QI+
Sbjct: 386 REFADFLCPIMDFAPEKRPTAQQCLQHPWLNLRT-----QNNEDDIEG---QMSNMQIK 436

[Close]

BLAST of Lsi01G005310 vs. TAIR 10
Match: AT4G35500.1 (Protein kinase superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-43
Identity = 82/119 (68.91%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DHLALMMELLGKMPRKIAIGGA+SKDYFDRHGDLKRIRRLK+W LDRLL++KYK  EA+A
Sbjct: 327 DHLALMMELLGKMPRKIAIGGAKSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEA 386

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMSNLQIR 209
           + FAEFL+ IL+FAPEKRPTAQQCL HPW+N        +  +++ E V+  M+NL I+
Sbjct: 387 KEFAEFLTPILEFAPEKRPTAQQCLDHPWMN--------VTTQNDAENVDDQMNNLHIK 437

[Close]

BLAST of Lsi01G005310 vs. TAIR 10
Match: AT4G35500.2 (Protein kinase superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-43
Identity = 82/119 (68.91%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DHLALMMELLGKMPRKIAIGGA+SKDYFDRHGDLKRIRRLK+W LDRLL++KYK  EA+A
Sbjct: 328 DHLALMMELLGKMPRKIAIGGAKSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEA 387

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLNPRNLPQGEMKNKSEVEKVNVGMSNLQIR 209
           + FAEFL+ IL+FAPEKRPTAQQCL HPW+N        +  +++ E V+  M+NL I+
Sbjct: 388 KEFAEFLTPILEFAPEKRPTAQQCLDHPWMN--------VTTQNDAENVDDQMNNLHIK 438

[Close]

BLAST of Lsi01G005310 vs. TAIR 10
Match: AT3G53030.1 (ser/arg-rich protein kinase 4 )

HSP 1 Score: 142.9 bits (359), Expect = 2.9e-34
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 90  DHLALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFSEADA 149
           DHLALMMELLG MPRKIA+GG  S+D+F+RHGDL+ IRRL+FW ++++L EKY+FSE DA
Sbjct: 377 DHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLTEKYEFSEQDA 436

Query: 150 QSFAEFLSLILDFAPEKRPTAQQCLQHPWLN--PRNLP---QGEMKNKSEVEK 198
              ++FL  ILDF PEKRPTA QCL HPW+N  PR++    + E  +K + EK
Sbjct: 437 NDLSDFLVSILDFVPEKRPTAAQCLLHPWINSGPRSIKPSLKDENSDKLDTEK 489

The following BLAST results are available for this feature:

BLAST of Lsi01G005310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96SB4	3.5e-24	51.55	SRSF protein kinase 1 OS=Homo sapiens OX=9606 GN=SRPK1 PE=1 SV=2	[more]
Q5RD27	3.5e-24	51.55	SRSF protein kinase 1 OS=Pongo abelii OX=9601 GN=SRPK1 PE=2 SV=2	[more]
O70551	3.0e-23	52.75	SRSF protein kinase 1 OS=Mus musculus OX=10090 GN=Srpk1 PE=1 SV=2	[more]
P78362	6.2e-21	47.42	SRSF protein kinase 2 OS=Homo sapiens OX=9606 GN=SRPK2 PE=1 SV=3	[more]
O54781	6.2e-21	47.42	SRSF protein kinase 2 OS=Mus musculus OX=10090 GN=Srpk2 PE=1 SV=2	[more]

BLAST of Lsi01G005310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLP2	8.3e-61	92.97	SRSF protein kinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B286	8.3e-61	92.97	SRSF protein kinase 1-like OS=Cucumis melo OX=3656 GN=LOC103485190 PE=4 SV=1	[more]
A0A0A0KHJ5	1.9e-60	92.19	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509...	[more]
A0A6J1BY46	1.0e-58	90.63	SRSF protein kinase 1 OS=Momordica charantia OX=3673 GN=LOC111005785 PE=4 SV=1	[more]
A0A6J1GG83	1.2e-56	86.72	SRSF protein kinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453657 PE=4 SV...	[more]

BLAST of Lsi01G005310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440907.1	1.7e-60	92.97	PREDICTED: SRSF protein kinase 1-like [Cucumis melo] >KAA0025610.1 SRSF protein ...	[more]
KAE8647628.1	3.8e-60	92.19	hypothetical protein Csa_003762 [Cucumis sativus]	[more]
XP_004134827.1	3.8e-60	92.19	SRSF protein kinase 1 [Cucumis sativus]	[more]
XP_038882451.1	3.2e-59	91.41	SRSF protein kinase 1-like [Benincasa hispida]	[more]
XP_022133108.1	2.1e-58	90.63	SRSF protein kinase 1 [Momordica charantia]	[more]

BLAST of Lsi01G005310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17530.1	1.2e-43	72.27	Protein kinase superfamily protein	[more]
AT2G17530.3	1.2e-43	72.27	Protein kinase superfamily protein	[more]
AT4G35500.1	7.7e-43	68.91	Protein kinase superfamily protein	[more]
AT4G35500.2	7.7e-43	68.91	Protein kinase superfamily protein	[more]
AT3G53030.1	2.9e-34	60.18	ser/arg-rich protein kinase 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 86..179 e-value: 5.8E-25 score: 90.2
None	No IPR available	PANTHER	PTHR24055:SF138	SRSF PROTEIN KINASE 1-LIKE	coord: 85..211
None	No IPR available	PANTHER	PTHR24055	MITOGEN-ACTIVATED PROTEIN KINASE	coord: 85..211
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 81..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G005310.1	Lsi01G005310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0050684	regulation of mRNA processing
biological_process	GO:0000245	spliceosomal complex assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity