Lsi01G004760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G004760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrho GDP-dissociation inhibitor 1-like
Locationchr01: 3961631 .. 3963729 (-)
RNA-Seq ExpressionLsi01G004760
SyntenyLsi01G004760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACCAATGATTTGCAGGAATCTTCTCCGCAAGAACAGGTCAAATAGGCATCTCTGTTCCATTTATTCCATTTCTCTAGCTACTCTGTCTTCTATCATTGATTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATTGGCTGAATTTGGAGAGAGGAAAACCCTGGATTCTTGGCCTTCATTGTACCAAACAACAATGCCCTGTGACCTGTAAGTGACCTGCACGATCTCCCCATATTTGTATTTGTTATTTTTAGCATCACCATTACGACCATTTCTCTTCACGTTTCATTCATTCCTTCTTTTCCTTTCTAATTTCAAAGACTTATCCTTTTGTGGGTTTCTCCAATTTTTATTCCTCATTACCCCTTTCTTTGACTACCAATACTTTCGGAATTATTATAAAAACTTACCCCTTTTTTTGTTATTGGGTTCCTCTTTCATTTTATTAGTTTCTTTTGGCTGGACCCCCTTGCTCCTAGCTTTATCTTTGACTTCTCTGTCCATTTTCTTCACCTCCTCTGTTTCTCTCTGGTCTTTCTTTTTTCTCTTCCGTTTGGTGGGCAGAGTTTATTCTTTTGTCTACCATTTGGGTTGTTTTGTTTTTCCTTGTTCTTTCTCCTCAAAGCATATTTGTGGATGGTCTTTTGACTTCTTTGGGCATTGAAACGAAATGGGTCTTGACAACAATGAAGATGGAAATGGTTCTCCTGAGACTAAGAAAATAGGTGGAGTTGAAGAAGAAAATGAAGATGAAAGTGTTGGATTGAGTAGAAAAATTATTGAAACATCTATATGTGCAGCAGAGGATGATGAAGATGAGGAGGGAAGGAAAATTGAGTTAGGTCCTCAGTGTACATTGAAAGAGCAACTTGAGAAAGATAAGGTTCCATTTCTTTTTCATTCTCCTTTTTTGAGTCAAACCAATTTTTGGTCTCTTTTGCTTTTAATCATGCTTCAATTTGTAATACTTCCAAATGGGATCTCTCTTAGGATGATGAAAGCTTAAGGAGGTGGAAAGAACAACTTCTAGGAAGTGTGGATATTGCAGCTGTTGGAGGTAATTCTTTGAACTTTGTTTTTTCAATTATAACCATATCATAAAGTAAAGGAATTAAAAGACAGATTTCATTTAGATAGTTTAAGAACTGAGGAAAGTGCTGAGATAATTGTGTTTCATTTGTTCTTGTGGTTTTGGTGGGTAAGAAAAAAAAAAAAAAAAAACAGAAACTTTGGAACCAGAGGTAAGGATTCTGAGCTTAGCGATTAGAACCCCAGGAAGGTCAGACATTGTTCTACAAGTTCCTGAGAATGGAAATCCAAAAGGGCTATGGTTTACATTGAAAGAAGGTAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGGTAACTTTTTTTTTTCTCTCTTTTTACCATCTCTTATCGACTAAATATCAACAAAGACTCAGCCTTTTTGTTTTTGGTCTTTAAATCTCTACAAAACAGTTGATAGTTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACTCACGAAATACCTGAAGATACAACCCCATCTGGGATCTTTGCTCGAGGATCATATTCAGCAAGAACCAAGGTAATTAAAGTTTGATTTAAACTTTTAATGTTTCGATTTCAAAATGGATGAGAAGTTTTGGGTTTGTTTGTTTGTTGGTTGCAGTTTGTTGATGATGATGACAAGTGCTACCTGGAAATCAACTACACATTTGATATAAGGAAAGATTGGCAATCATCTTAAAAGACATCAGGATTCTCTGTTAATGATTGGATTTGCATTTGAAAAAAAAATATCTTCTCTTTTGAAGCTCATTCATAAATTTGGTTTGGATGTCCAAATATTTCATGTACTTTCTTTCTTTTATCTCTTGATTCTTTCATGTACGTGCATGAGACAGACTGATGGCCTCAACTCAAATTATGCAAATGCATATTTATTGATGAAATTCATTCGGAGCTGTTTGTTCATGAAAAAGGGTCAATTATTCAATTTCCTTGC

mRNA sequence

AAAACCAATGATTTGCAGGAATCTTCTCCGCAAGAACAGGTCAAATAGGCATCTCTGTTCCATTTATTCCATTTCTCTAGCTACTCTGTCTTCTATCATTGATTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATTGGCTGAATTTGGAGAGAGGAAAACCCTGGATTCTTGGCCTTCATTGTACCAAACAACAATGCCCTGTGACCTGTAAGTGACCTGCACGATCTCCCCATATTTGTATTTGTTATTTTTAGCATCACCATTACGACCATTTCTCTTCACGTTTCATTCATTCCTTCTTTTCCTTTCTAATTTCAAAGACTTATCCTTTTGTGGGTTTCTCCAATTTTTATTCCTCATTACCCCTTTCTTTGACTACCAATACTTTCGGAATTATTATAAAAACTTACCCCTTTTTTTGTTATTGGGTTCCTCTTTCATTTTATTAGTTTCTTTTGGCTGGACCCCCTTGCTCCTAGCTTTATCTTTGACTTCTCTGTCCATTTTCTTCACCTCCTCTGTTTCTCTCTGGTCTTTCTTTTTTCTCTTCCGTTTGGTGGGCAGAGTTTATTCTTTTGTCTACCATTTGGGTTGTTTTGTTTTTCCTTGTTCTTTCTCCTCAAAGCATATTTGTGGATGGTCTTTTGACTTCTTTGGGCATTGAAACGAAATGGGTCTTGACAACAATGAAGATGGAAATGGTTCTCCTGAGACTAAGAAAATAGGTGGAGTTGAAGAAGAAAATGAAGATGAAAGTGTTGGATTGAGTAGAAAAATTATTGAAACATCTATATGTGCAGCAGAGGATGATGAAGATGAGGAGGGAAGGAAAATTGAGTTAGGTCCTCAGTGTACATTGAAAGAGCAACTTGAGAAAGATAAGGATGATGAAAGCTTAAGGAGGTGGAAAGAACAACTTCTAGGAAGTGTGGATATTGCAGCTGTTGGAGAAACTTTGGAACCAGAGGTAAGGATTCTGAGCTTAGCGATTAGAACCCCAGGAAGGTCAGACATTGTTCTACAAGTTCCTGAGAATGGAAATCCAAAAGGGCTATGGTTTACATTGAAAGAAGGTAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGTTGATAGTTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACTCACGAAATACCTGAAGATACAACCCCATCTGGGATCTTTGCTCGAGGATCATATTCAGCAAGAACCAAGTTTGTTGATGATGATGACAAGTGCTACCTGGAAATCAACTACACATTTGATATAAGGAAAGATTGGCAATCATCTTAAAAGACATCAGGATTCTCTGTTAATGATTGGATTTGCATTTGAAAAAAAAATATCTTCTCTTTTGAAGCTCATTCATAAATTTGGTTTGGATGTCCAAATATTTCATGTACTTTCTTTCTTTTATCTCTTGATTCTTTCATGTACGTGCATGAGACAGACTGATGGCCTCAACTCAAATTATGCAAATGCATATTTATTGATGAAATTCATTCGGAGCTGTTTGTTCATGAAAAAGGGTCAATTATTCAATTTCCTTGC

Coding sequence (CDS)

ATGGGTCTTGACAACAATGAAGATGGAAATGGTTCTCCTGAGACTAAGAAAATAGGTGGAGTTGAAGAAGAAAATGAAGATGAAAGTGTTGGATTGAGTAGAAAAATTATTGAAACATCTATATGTGCAGCAGAGGATGATGAAGATGAGGAGGGAAGGAAAATTGAGTTAGGTCCTCAGTGTACATTGAAAGAGCAACTTGAGAAAGATAAGGATGATGAAAGCTTAAGGAGGTGGAAAGAACAACTTCTAGGAAGTGTGGATATTGCAGCTGTTGGAGAAACTTTGGAACCAGAGGTAAGGATTCTGAGCTTAGCGATTAGAACCCCAGGAAGGTCAGACATTGTTCTACAAGTTCCTGAGAATGGAAATCCAAAAGGGCTATGGTTTACATTGAAAGAAGGTAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGTTGATAGTTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACTCACGAAATACCTGAAGATACAACCCCATCTGGGATCTTTGCTCGAGGATCATATTCAGCAAGAACCAAGTTTGTTGATGATGATGACAAGTGCTACCTGGAAATCAACTACACATTTGATATAAGGAAAGATTGGCAATCATCTTAA

Protein sequence

MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVPENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS
Homology
[Close]
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-86
Identity = 155/230 (67.39%), Postives = 190/230 (82.61%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MG D+N +   + +            D+   LSR++ E+S+CA E++ED++  K++LGPQ
Sbjct: 10  MGFDDNNNNKNNKDGDDENSSSRTRADDD-ALSRQMSESSLCATEEEEDDDS-KLQLGPQ 69

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
            T+KE LEKDKDDESLR+WKEQLLGSVD+  +GETL+PEVRI SLAI +PGR DIVL VP
Sbjct: 70  YTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVP 129

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           ENGNPKG+WFTLKEGS+Y+L FTF V+NNIV+GL+Y NTVWKTGVKVD +KEMLGTFSPQ
Sbjct: 130 ENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQ 189

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDW 231
            EPY H +PE+TTPSG+FARGSYSARTKF+DDD+KCYLEINY+FDIRK+W
Sbjct: 190 LEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match: P52565 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 0 

Query: 43  AAEDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRI 102
           AAE++EDE     +   Q +++E  E DKDDESLR++KE LLG V ++A  +   P V +
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVV 74

Query: 103 LSLAI---RTPGRSDIVLQVPENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANT 162
             L +     PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY   
Sbjct: 75  TGLTLVCSSAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQH 134

Query: 163 VWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLE 222
            ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSYS +++F DDD   +L 
Sbjct: 135 TYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLS 194

Query: 223 INYTFDIRKDWQ 232
             +   I+KDW+
Sbjct: 195 WEWNLTIKKDWK 203

[Close]
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match: Q4R4J0 (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 71/192 (36.98%), Postives = 111/192 (57.81%), Query Frame = 0 

Query: 43  AAEDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRI 102
           AAE++EDE     +   Q +++E  E DKDDESLR++KE LLG V ++A  +   P V +
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVV 74

Query: 103 LSLAI---RTPGRSDIVLQVPENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANT 162
             L +     PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY   
Sbjct: 75  TGLTLVCSSAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQH 134

Query: 163 VWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLE 222
            ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSYS +++F DDD   +L 
Sbjct: 135 TYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLS 194

Query: 223 INYTFDIRKDWQ 232
             +   I+KDW+
Sbjct: 195 WEWNLTIKKDWK 203

[Close]
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match: O14224 (Rho GDP-dissociation inhibitor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6F12.06 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-27
Identity = 66/193 (34.20%), Postives = 106/193 (54.92%), Query Frame = 0 

Query: 45  EDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVR--- 104
           EDD  E G  + LG + +L E ++ D +DESL++WK     S+ I   G +   + R   
Sbjct: 17  EDDTFEHGPPVSLGEKKSLNEYMKMDAEDESLQKWK----ASLGITGTGYSPSNDRRTVV 76

Query: 105 ILSLAIRTPGRSDIVLQVPENGNPKGL---WFTLKEGSRYSLIFTFKVSNNIVAGLKYAN 164
           IL L++   GR  + + + +  + + +    FT+KEGS + +   F+V + +++GL+Y  
Sbjct: 77  ILKLSLLVDGRDPVDVNMEDAASVEQIRKKGFTIKEGSEFKIGVKFRVQHEVISGLRYVQ 136

Query: 165 TVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYL 224
           TV + G  VD +  M+G++ P E PY      D  P+G+ ARG Y A  KFVDDD   + 
Sbjct: 137 TVRRRGFVVDKTSTMIGSYGPSETPYDFTSEPDEAPTGMLARGHYEANGKFVDDDKVVHH 196

Query: 225 EINYTFDIRKDWQ 232
           E  + FD+ K W+
Sbjct: 197 EFVWAFDVAKSWK 205

[Close]
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match: P19803 (Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 6.4e-27
Identity = 70/190 (36.84%), Postives = 110/190 (57.89%), Query Frame = 0 

Query: 43  AAEDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRI 102
           AAE++EDE     +   Q +++E  E DKDDESLR++KE LLG V ++A        V  
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTR 74

Query: 103 LSLAIRT-PGRSDIVLQVPENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVW 162
           L+L   T PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY    +
Sbjct: 75  LTLVCSTAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTY 134

Query: 163 KTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEIN 222
           + GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSY+ +++F DDD   +L   
Sbjct: 135 RKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWE 194

Query: 223 YTFDIRKDWQ 232
           +   I+K+W+
Sbjct: 195 WNLTIKKEWK 203

[Close]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match: A0A1S3B0Z9 (rho GDP-dissociation inhibitor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484655 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.4e-119
Identity = 216/233 (92.70%), Postives = 227/233 (97.42%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEEN D+SVGLSRK+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVD++AVGETLEPEV+ILSLAIRTPGR+DIVLQVP
Sbjct: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGETLEPEVKILSLAIRTPGRADIVLQVP 120

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           E GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ
Sbjct: 121 ETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           EEPYTHE+PEDTTPSG+FARGSYSARTKF+DDD+K YLEINYTFDIRKDWQSS
Sbjct: 181 EEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 233

[Close]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match: A0A1S3B0V5 (rho GDP-dissociation inhibitor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484655 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 216/234 (92.31%), Postives = 227/234 (97.01%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEEN D+SVGLSRK+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVG-ETLEPEVRILSLAIRTPGRSDIVLQV 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVD++AVG ETLEPEV+ILSLAIRTPGR+DIVLQV
Sbjct: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGAETLEPEVKILSLAIRTPGRADIVLQV 120

Query: 121 PENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           QEEPYTHE+PEDTTPSG+FARGSYSARTKF+DDD+K YLEINYTFDIRKDWQSS
Sbjct: 181 QEEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 234

[Close]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match: A0A6J1BVG7 (rho GDP-dissociation inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111005718 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 205/233 (87.98%), Postives = 218/233 (93.56%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGL   E+GNGSPE K+    +EE  ++SVGLSRK+ ETSICA E+DEDEEGRKIELGPQ
Sbjct: 1   MGL---EEGNGSPEKKE---AKEEQGEDSVGLSRKLSETSICAPEEDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEV+ILSLAIRTP R DI+LQVP
Sbjct: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVKILSLAIRTPDREDIILQVP 120

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           ENGNPKG WFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ
Sbjct: 121 ENGNPKGPWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           EEPYTHE+PEDTTPSG+FARGSYSAR+KFVDDDDKCYLEINYTFDIRKDWQSS
Sbjct: 181 EEPYTHEMPEDTTPSGMFARGSYSARSKFVDDDDKCYLEINYTFDIRKDWQSS 227

[Close]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match: A0A6J1GF88 (rho GDP-dissociation inhibitor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453629 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.8e-110
Identity = 206/234 (88.03%), Postives = 216/234 (92.31%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEE-ENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGP 60
           MGLDNNEDGNG PETKKI GVEE E  DES   S   I  +  AAEDDEDEEGRKIELGP
Sbjct: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFICAAAAAAEDDEDEEGRKIELGP 60

Query: 61  QCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQV 120
           QCTLK+Q EKDKDDESLRRWKEQLLGSVDI+AVGETLEPEV+ILSLAIR+PGR+DIVLQV
Sbjct: 61  QCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQV 120

Query: 121 PENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE+GNPKG WFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PESGNPKGSWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           QEEPYTHEIPEDTTPSGIFARGSYSA+TKFVDDD+KCYLEI YTFDI+KDWQSS
Sbjct: 181 QEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWQSS 234

[Close]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match: A0A6J1IVP4 (rho GDP-dissociation inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478825 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 203/234 (86.75%), Postives = 215/234 (91.88%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEE-ENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGP 60
           MGLDNNEDGNG PETKKI GVEE E  DES   S   +  +  AAEDDEDE+GRKIELGP
Sbjct: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGP 60

Query: 61  QCTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQV 120
           QCTLK+Q EKDKDDESLRRWKEQLLGSVDI+AVGETLEPEV+ILSLAIR+PGR+DIVLQV
Sbjct: 61  QCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQV 120

Query: 121 PENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE+GNPKG WFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           QEEPYTHEIPEDTTPSGIFARGSYSA+TKFVDDD+KCYLEI YTFDI+KDW SS
Sbjct: 181 QEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 234

[Close]
BLAST of Lsi01G004760 vs. NCBI nr
Match: XP_038882895.1 (rho GDP-dissociation inhibitor 1-like [Benincasa hispida])

HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122
Identity = 223/233 (95.71%), Postives = 229/233 (98.28%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGSPETKKIGGVEEE+ DESVGLSRK+ E SICAAEDDEDEEGRKIELGPQ
Sbjct: 7   MGLDNNEDGNGSPETKKIGGVEEEDGDESVGLSRKMSEASICAAEDDEDEEGRKIELGPQ 66

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEV+ILSLAIRTPGR DIVLQVP
Sbjct: 67  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVKILSLAIRTPGRPDIVLQVP 126

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           E+GNPKGLWFTLKEGSRYSLIFTF+VSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ
Sbjct: 127 ESGNPKGLWFTLKEGSRYSLIFTFQVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 186

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           EEPYTHE+PEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS
Sbjct: 187 EEPYTHEMPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 239

[Close]
BLAST of Lsi01G004760 vs. NCBI nr
Match: XP_011658125.1 (rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis sativus] >KAE8647644.1 hypothetical protein Csa_003952 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 6.9e-119
Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEE  DESVGLS K+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEEKGDESVGLSIKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
           CTLK QLEKDKDDESLRRWKEQLLGSVDI+AVGETLEPEV+ILSLAIRTPGR+DIVLQVP
Sbjct: 61  CTLKAQLEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRTPGRADIVLQVP 120

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           E GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ
Sbjct: 121 EKGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           EEPYTHE+PEDTTPSGIFARGSYSARTKFVDDDDKCYLE NYTFDIRKDWQSS
Sbjct: 181 EEPYTHEMPEDTTPSGIFARGSYSARTKFVDDDDKCYLEFNYTFDIRKDWQSS 233

[Close]
BLAST of Lsi01G004760 vs. NCBI nr
Match: XP_008440067.1 (PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis melo] >XP_016899134.1 PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 216/233 (92.70%), Postives = 227/233 (97.42%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEEN D+SVGLSRK+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVD++AVGETLEPEV+ILSLAIRTPGR+DIVLQVP
Sbjct: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGETLEPEVKILSLAIRTPGRADIVLQVP 120

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           E GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ
Sbjct: 121 ETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           EEPYTHE+PEDTTPSG+FARGSYSARTKF+DDD+K YLEINYTFDIRKDWQSS
Sbjct: 181 EEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 233

[Close]
BLAST of Lsi01G004760 vs. NCBI nr
Match: XP_011658124.1 (rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 1.7e-117
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEE  DESVGLS K+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEEKGDESVGLSIKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVG-ETLEPEVRILSLAIRTPGRSDIVLQV 120
           CTLK QLEKDKDDESLRRWKEQLLGSVDI+AVG ETLEPEV+ILSLAIRTPGR+DIVLQV
Sbjct: 61  CTLKAQLEKDKDDESLRRWKEQLLGSVDISAVGAETLEPEVKILSLAIRTPGRADIVLQV 120

Query: 121 PENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PEKGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           QEEPYTHE+PEDTTPSGIFARGSYSARTKFVDDDDKCYLE NYTFDIRKDWQSS
Sbjct: 181 QEEPYTHEMPEDTTPSGIFARGSYSARTKFVDDDDKCYLEFNYTFDIRKDWQSS 234

[Close]
BLAST of Lsi01G004760 vs. NCBI nr
Match: XP_008440066.1 (PREDICTED: rho GDP-dissociation inhibitor 1 isoform X1 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 3.8e-117
Identity = 216/234 (92.31%), Postives = 227/234 (97.01%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MGLDNNEDGNGS E KKIGGVEEEN D+SVGLSRK+ ETSICAAEDDEDEEGRKIELGPQ
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAAEDDEDEEGRKIELGPQ 60

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVG-ETLEPEVRILSLAIRTPGRSDIVLQV 120
           CTLKEQLEKDKDDESLRRWKEQLLGSVD++AVG ETLEPEV+ILSLAIRTPGR+DIVLQV
Sbjct: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGAETLEPEVKILSLAIRTPGRADIVLQV 120

Query: 121 PENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE GNPKGLWFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQSS 234
           QEEPYTHE+PEDTTPSG+FARGSYSARTKF+DDD+K YLEINYTFDIRKDWQSS
Sbjct: 181 QEEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 234

[Close]
BLAST of Lsi01G004760 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 318.2 bits (814), Expect = 5.7e-87
Identity = 155/230 (67.39%), Postives = 190/230 (82.61%), Query Frame = 0 

Query: 1   MGLDNNEDGNGSPETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQ 60
           MG D+N +   + +            D+   LSR++ E+S+CA E++ED++  K++LGPQ
Sbjct: 10  MGFDDNNNNKNNKDGDDENSSSRTRADDD-ALSRQMSESSLCATEEEEDDDS-KLQLGPQ 69

Query: 61  CTLKEQLEKDKDDESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVP 120
            T+KE LEKDKDDESLR+WKEQLLGSVD+  +GETL+PEVRI SLAI +PGR DIVL VP
Sbjct: 70  YTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVP 129

Query: 121 ENGNPKGLWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 180
           ENGNPKG+WFTLKEGS+Y+L FTF V+NNIV+GL+Y NTVWKTGVKVD +KEMLGTFSPQ
Sbjct: 130 ENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQ 189

Query: 181 EEPYTHEIPEDTTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDW 231
            EPY H +PE+TTPSG+FARGSYSARTKF+DDD+KCYLEINY+FDIRK+W
Sbjct: 190 LEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of Lsi01G004760 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-81
Identity = 147/220 (66.82%), Postives = 177/220 (80.45%), Query Frame = 0 

Query: 14  ETKKIGGVEEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQCTLKEQLEKDKDD 73
           E KK  G       E +GLSRK   +S+   EDDE++E +K+ELGP   LKEQLE+DKDD
Sbjct: 6   EMKK--GEASGETSEKMGLSRKNSGSSLSPTEDDEEDEDKKLELGPMIALKEQLERDKDD 65

Query: 74  ESLRRWKEQLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVPENG--NPKGLWFT 133
           ESLRRWKEQLLG VD+  VGET +P V+IL L IR+P R ++VL +PE+G  NPKG WFT
Sbjct: 66  ESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWFT 125

Query: 134 LKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPED 193
           +KEGS+Y+L+F F+V+NNIV+GL+Y NTVWKTGVKVDS+K MLGTFSPQ E Y H +PE+
Sbjct: 126 IKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMPEE 185

Query: 194 TTPSGIFARGSYSARTKFVDDDDKCYLEINYTFDIRKDWQ 232
            TPSG+FARGSYSARTKF+DDD+KCYLEINYTFDIRK WQ
Sbjct: 186 MTPSGMFARGSYSARTKFIDDDNKCYLEINYTFDIRKSWQ 223

[Close]
BLAST of Lsi01G004760 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-81
Identity = 144/211 (68.25%), Postives = 174/211 (82.46%), Query Frame = 0 

Query: 22  EEENEDESVGLSRKIIETSICAAEDDEDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKE 81
           E   E +  GLSRK   +S+C  +DDE+EE +K+ELGP   LKEQLEKDKDDESLRRWKE
Sbjct: 12  ESSEEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWKE 71

Query: 82  QLLGSVDIAAVGETLEPEVRILSLAIRTPGRSDIVLQVPENGNP--KGLWFTLKEGSRYS 141
           QLLGSVD+  VGET +P V+IL+L IR+P R D+VL +PENG P  KG WFTLKEGS+Y+
Sbjct: 72  QLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKYT 131

Query: 142 LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFA 201
           LIFTF+V+NNIV+GL+Y+NTVWKTG+KV S KEMLGTFSPQ EPYTH + E+T PSG+  
Sbjct: 132 LIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLV 191

Query: 202 RGSYSARTKFVDDDDKCYLEINYTFDIRKDW 231
           RGSYS ++KFVDDD++CYLE NYTFDIRK+W
Sbjct: 192 RGSYSVKSKFVDDDNQCYLENNYTFDIRKNW 222

The following BLAST results are available for this feature:
BLAST of Lsi01G004760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SFC68.0e-8667.39Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV... [more]
P525652.2e-2736.98Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3[more]
Q4R4J02.2e-2736.98Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 ... [more]
O142244.9e-2734.20Rho GDP-dissociation inhibitor OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
P198036.4e-2736.84Rho GDP-dissociation inhibitor 1 OS=Bos taurus OX=9913 GN=ARHGDIA PE=1 SV=3[more]
BLAST of Lsi01G004760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B0Z97.4e-11992.70rho GDP-dissociation inhibitor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484... [more]
A0A1S3B0V51.8e-11792.31rho GDP-dissociation inhibitor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484... [more]
A0A6J1BVG71.7e-11087.98rho GDP-dissociation inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A6J1GF884.8e-11088.03rho GDP-dissociation inhibitor 1-like isoform X2 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1IVP41.2e-10886.75rho GDP-dissociation inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11147882... [more]
BLAST of Lsi01G004760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882895.11.7e-12295.71rho GDP-dissociation inhibitor 1-like [Benincasa hispida][more]
XP_011658125.16.9e-11993.56rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis sativus] >KAE8647644.1... [more]
XP_008440067.11.5e-11892.70PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis melo] >XP_016899... [more]
XP_011658124.11.7e-11793.16rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis sativus][more]
XP_008440066.13.8e-11792.31PREDICTED: rho GDP-dissociation inhibitor 1 isoform X1 [Cucumis melo][more]
BLAST of Lsi01G004760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07880.15.7e-8767.39Immunoglobulin E-set superfamily protein [more]
AT1G62450.12.7e-8166.82Immunoglobulin E-set superfamily protein [more]
AT1G12070.12.7e-8168.25Immunoglobulin E-set superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPRINTSPR00492RHOGDIcoord: 209..226
score: 32.41
coord: 150..166
score: 45.1
coord: 167..182
score: 33.33
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 43..229
e-value: 2.2E-81
score: 272.3
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 22..231
IPR024792Rho GDP-dissociation inhibitor domain superfamilyGENE3D2.70.50.30Coagulation Factor XIII, subunit A, domain 1coord: 52..232
e-value: 5.4E-69
score: 233.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR10980:SF50RHO GDP-DISSOCIATION INHIBITOR 1coord: 22..231
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 43..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G004760.1Lsi01G004760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity