Lsi01G004630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G004630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	chromoplast-specific carotenoid-associated protein, chromoplastic-like
Location	chr01: 3863213 .. 3865685 (-)
RNA-Seq Expression	Lsi01G004630
Synteny	Lsi01G004630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATGCTTCGGTTGGCTCGCTTTAGGCTGCCTTCTCAGTATTCTGTGCTCTCCCTCAACAATGCCACGTGTTTTAATCTCAACGGGCCACGTTGCGTGCAATTATTAAACAAGTCATTAACTTCACAAGGTCCAATTTGGCCTCCAAAACAACGACAAGTTTCGGAACAGTCGTGAAGATCAAGGGTAGAATCGTCTTCTTACCTGTTCTTCGTATTTATTTAATCGTCCCTCTCGTTTGCTAGCTTTTGAAATATTTTTAAAACGCTGCTGTGTACGTCCCCGTCTTTCACTTTGTGCTGTGTGTTTGTTTGTCTAATTTAGGGAATTGGAGAGAAATCAATGGCGTTTGTTTCTCAATTCAATCAGCTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAGCCTCAATTGATTTCTAAGCCCTCTATTTTTCCCATCGGTTCAATTGGGGCCGGCGTCAGAGCCGCGGCGGGGAAGTCACCGATCTCAGCCAGACTTGCGTTCAAGGTCCGTGCGGTGGTAAACGATGATGAGTGGGGCGCGGAGAAGGACGAGCCGTATGGAGATAGTCCGGCTGTGGCAGTAGCTGAAGAGGAGGAGGAGAAGCCTCTTGAGCCATCGGAGATTTATAAACTGAAGAAAGCGTTGGTGGACTCGTTTGACGGGACCAATCGTGGATTACAAGCTTCTAGCGAAACTAGGGCGGATATTGTCGAGCTGATTACGCAACTGGAAGCGAAGAATCCAACACCTGCTCCTACTGAGGCCCTGTCTCTGCTTAACGGCAAATGGATTCTTGCGTAAGTTCTCCTAATAATACCAAACTTGATACTGGTAACCTGGTTGGTTATTCCTTTAGCAGTCATTTTATATACAGCTTCCTCTTTATACTATATGATTGAGCTCGTAATTATGAATCGGGAAAAAGATCCCGAATCAACAGACCTAGTAATTTTTTTGGGATGACTGAAAAACTGGTACGAGTTTATTCGAATTTCATTTCTGCTGACTAATCACATATCTCCCTTGCAAACCTTCATGATTTTTTAAATATTGGTGGTAATTTCTTATACATGCTGATATTGAAGATCATATTTGAACTTAGTATCGACCTTCCACGTGGCGTTGTTACTTCTTGTTGGGCAAGTCATATTGTTATGAGTTAAACTAGAATATTATGCATCAGATTTGGAACCATGGGCCATTTAGTAAAGGTTTTTATTAAGATTTGGTTTCCCTAATGGGATTTTATACTTGTATCTGAGTTTGTATCAATTTCTTTGAATGTGGTCAGTTAGCCAAAGTTAGCTAGCCTTGTTATGTTAAATCATTGCTTTTCAAACCTTTCAATTTCTTCATTTCCTTTGAAGGAAATGAAGAGAGTCTATACAATAGCTTTTTACACCTGGCAAACATGCCTTAATTTTGTCTTTTCTTTTAATCTGTATATTGTCTATAACATACTAGAAGATGATTGGTTGTTCTGCATTACAAAATTTTGTCACCCTAAGTTTCTTAATATGAATGTTTGGGGATGTAGGTACACATCGTTCTCGGGTCTGTACCCATTGTTGTCTAGGAGAACATTTCCATTGGTCAAAGTGGAAGAAATCTCACAGACAATTGATTCAGAGAGCTTCACCGTCCAAAACTCCGTCCAGTTTTCCGGCCCTCTAGCCACAACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCCCAGCGTGTACAGGTAAGCTAGAATCTGTCTTTGACCTGGCAGTCTGAACCATAGAAAAAATTGGATTTTCTTGTCCGTTTGTGCAATCCCAACTCTTTGACTTTGTAATCAGCTAATATTTATTTTCACATTCAACTATCCAGATCAAGTTTGAAGAAGGTGTCATTGGGACTCCCCAGCTGACAGATTCAGTAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGACCTTTCACCATTCAATGGCATCATAACCTCTGTCCAAGACACTGCTTCAAATGTGGCCAAGACGATTTCGAGCCGCCCACCAATCAAGTTCTCATTCCCAAACAGCAAGGCAGAGTCTTGGTTGCTAACTACTTATCTTGATGAAGATCTTCGAATTTCACGAGGAGATGGCGGTAGCGTGTTCGTACTCATCAAGGAGGGCAGTGCTCTCTTATCCCCCTGAATACCTCTACTCTCCTCACTATCTTCTGCTGTTCCAAGGGTATAATGGAGTTATATAAAGGGTTCATAGGAAACTAAATTATTATCTAAAGATGATGTTAAACATGTGGTAGTTTCTTTTCAAATAGCGAATGGTATTGCCTTCTGTTAAAAGGGCCAGCTTTCATCTTATGTTAAATTAGTAGTAGTCACTCGAGTACCTTTTGGGAAAAGAAACACCATTAATCCTGTACCACACAATACAATAATCCAAGTTAATCAAAAGGTGTGAAAAGCTTGTTTGGATTGAA

mRNA sequence

ACATGCTTCGGTTGGCTCGCTTTAGGCTGCCTTCTCAGTATTCTGTGCTCTCCCTCAACAATGCCACGTGTTTTAATCTCAACGGGCCACGTTGCGTGCAATTATTAAACAAGTCATTAACTTCACAAGGTCCAATTTGGCCTCCAAAACAACGACAAGTTTCGGAACAGTCGTGAAGATCAAGGGTAGAATCGTCTTCTTACCTGTTCTTCGTATTTATTTAATCGTCCCTCTCGTTTGCTAGCTTTTGAAATATTTTTAAAACGCTGCTGTGTACGTCCCCGTCTTTCACTTTGTGCTGTGTGTTTGTTTGTCTAATTTAGGGAATTGGAGAGAAATCAATGGCGTTTGTTTCTCAATTCAATCAGCTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAGCCTCAATTGATTTCTAAGCCCTCTATTTTTCCCATCGGTTCAATTGGGGCCGGCGTCAGAGCCGCGGCGGGGAAGTCACCGATCTCAGCCAGACTTGCGTTCAAGGTCCGTGCGGTGGTAAACGATGATGAGTGGGGCGCGGAGAAGGACGAGCCGTATGGAGATAGTCCGGCTGTGGCAGTAGCTGAAGAGGAGGAGGAGAAGCCTCTTGAGCCATCGGAGATTTATAAACTGAAGAAAGCGTTGGTGGACTCGTTTGACGGGACCAATCGTGGATTACAAGCTTCTAGCGAAACTAGGGCGGATATTGTCGAGCTGATTACGCAACTGGAAGCGAAGAATCCAACACCTGCTCCTACTGAGGCCCTGTCTCTGCTTAACGGCAAATGGATTCTTGCGTACACATCGTTCTCGGGTCTGTACCCATTGTTGTCTAGGAGAACATTTCCATTGGTCAAAGTGGAAGAAATCTCACAGACAATTGATTCAGAGAGCTTCACCGTCCAAAACTCCGTCCAGTTTTCCGGCCCTCTAGCCACAACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCCCAGCGTGTACAGATCAAGTTTGAAGAAGGTGTCATTGGGACTCCCCAGCTGACAGATTCAGTAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGACCTTTCACCATTCAATGGCATCATAACCTCTGTCCAAGACACTGCTTCAAATGTGGCCAAGACGATTTCGAGCCGCCCACCAATCAAGTTCTCATTCCCAAACAGCAAGGCAGAGTCTTGGTTGCTAACTACTTATCTTGATGAAGATCTTCGAATTTCACGAGGAGATGGCGGTAGCGTGTTCGTACTCATCAAGGAGGGCAGTGCTCTCTTATCCCCCTGAATACCTCTACTCTCCTCACTATCTTCTGCTGTTCCAAGGGTATAATGGAGTTATATAAAGGGTTCATAGGAAACTAAATTATTATCTAAAGATGATGTTAAACATGTGGTAGTTTCTTTTCAAATAGCGAATGGTATTGCCTTCTGTTAAAAGGGCCAGCTTTCATCTTATGTTAAATTAGTAGTAGTCACTCGAGTACCTTTTGGGAAAAGAAACACCATTAATCCTGTACCACACAATACAATAATCCAAGTTAATCAAAAGGTGTGAAAAGCTTGTTTGGATTGAA

Coding sequence (CDS)

ATGGCGTTTGTTTCTCAATTCAATCAGCTTCCGTGCAAGACTCTCTCACTGAATCCACCGCAGCCTCAATTGATTTCTAAGCCCTCTATTTTTCCCATCGGTTCAATTGGGGCCGGCGTCAGAGCCGCGGCGGGGAAGTCACCGATCTCAGCCAGACTTGCGTTCAAGGTCCGTGCGGTGGTAAACGATGATGAGTGGGGCGCGGAGAAGGACGAGCCGTATGGAGATAGTCCGGCTGTGGCAGTAGCTGAAGAGGAGGAGGAGAAGCCTCTTGAGCCATCGGAGATTTATAAACTGAAGAAAGCGTTGGTGGACTCGTTTGACGGGACCAATCGTGGATTACAAGCTTCTAGCGAAACTAGGGCGGATATTGTCGAGCTGATTACGCAACTGGAAGCGAAGAATCCAACACCTGCTCCTACTGAGGCCCTGTCTCTGCTTAACGGCAAATGGATTCTTGCGTACACATCGTTCTCGGGTCTGTACCCATTGTTGTCTAGGAGAACATTTCCATTGGTCAAAGTGGAAGAAATCTCACAGACAATTGATTCAGAGAGCTTCACCGTCCAAAACTCCGTCCAGTTTTCCGGCCCTCTAGCCACAACTTCCATTAGTACTAATGCAAAGTTTGAAGTTCGAAGTCCCCAGCGTGTACAGATCAAGTTTGAAGAAGGTGTCATTGGGACTCCCCAGCTGACAGATTCAGTAGTGATACCAGAAAATGTGGAGTTTCTTGGGCAGAAGATTGACCTTTCACCATTCAATGGCATCATAACCTCTGTCCAAGACACTGCTTCAAATGTGGCCAAGACGATTTCGAGCCGCCCACCAATCAAGTTCTCATTCCCAAACAGCAAGGCAGAGTCTTGGTTGCTAACTACTTATCTTGATGAAGATCTTCGAATTTCACGAGGAGATGGCGGTAGCGTGTTCGTACTCATCAAGGAGGGCAGTGCTCTCTTATCCCCCTGA

Protein sequence

MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAVVNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDLRISRGDGGSVFVLIKEGSALLSP

Homology

[Close]

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot
Match: Q96398 (Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sativus OX=3659 GN=CHRC PE=1 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.0e-148
Identity = 269/322 (83.54%), Postives = 297/322 (92.24%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQL SKPS+FPI SIGA  RAAAGKS IS R AFKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
           +NDDEWG +KDE YGD  +VAVAE+EEEKPLEPSEIYKLKKALVDSF GT+RGL+ S +T
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLE+KNPTPAPTEAL+LLNGKWILAYT+F+GL+PLLS R  PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLS-RNLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDS+VIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NV+FLGQKID +PFNGII+S+QDTASNVAKTISS+PPIKFS  N++ ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLS 323
           RISRGDGGSVFVL+KEGS+ LS
Sbjct: 301 RISRGDGGSVFVLLKEGSSFLS 321

[Close]

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot
Match: Q9ZWQ8 (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu OX=55188 GN=PAP PE=2 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.3e-123
Identity = 238/328 (72.56%), Postives = 270/328 (82.32%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MA +SQ NQ PCKTLS NPP  Q  SKPSI P+ S+    R+ A KS +S +   + R +
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRIS-RSLAKKSFLSIQGFTRARPL 60

Query: 61  V-----NDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQ 120
           V     +DDEWG EK++  G + AVA    EEE P E +EI  LKKALVDSF GT+RGL 
Sbjct: 61  VLTRAADDDEWGPEKEKEGGGALAVA----EEESPKEVTEIDNLKKALVDSFYGTDRGLN 120

Query: 121 ASSETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKV 180
           A+SETRA+IVELITQLEAKNPTPAPTEAL+LLN KWIL YTSFSGL+PLLSR T PL +V
Sbjct: 121 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARV 180

Query: 181 EEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS 240
           EEISQTIDSE+FTVQNS+QF+GPLATTSISTNAKFEVRSP+RVQIKFEEGVIGTPQ+TDS
Sbjct: 181 EEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDS 240

Query: 241 VVIPENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTY 300
           +V+PENVEFLGQKIDLSPF GI++SVQDTAS+VAKTISS+PP+KFS  NS A+SWLLTTY
Sbjct: 241 LVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTY 300

Query: 301 LDEDLRISRGDGGSVFVLIKEGSALLSP 324
           LDEDLRISR D GSVFV IKEGS LL P
Sbjct: 301 LDEDLRISRADAGSVFVFIKEGSPLLMP 323

[Close]

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot
Match: P80471 (Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 9.6e-114
Identity = 228/332 (68.67%), Postives = 257/332 (77.41%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGV-----RAAAGKSPISARLAF 60
           MA +S  NQ+PCKTL +     +  SK S  PI S          R+ + K   + +  F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 61  KVRAVVND--DEWGAEKDE--PYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTN 120
             +A   D  DEWG E ++  P G      VA  EEE P EPSEI  LKK L DS  GTN
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGG------VAVVEEEPPKEPSEIELLKKQLADSLYGTN 120

Query: 121 RGLQASSETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFP 180
           RGL ASSETRA+IVELITQLE+KNP PAPTEAL+LLNGKWILAYTSFSGL+PLLSR   P
Sbjct: 121 RGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLP 180

Query: 181 LVKVEEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQ 240
           LV+VEEISQTIDSESFTVQNSV F+GPLATTSISTNAKFEVRSP+RVQIKFEEG+IGTPQ
Sbjct: 181 LVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 240

Query: 241 LTDSVVIPENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWL 300
           LTDS+V+PENVEFLGQKIDLSPF G+ITSVQDTAS+VAK+ISS+PPIKF   N+ A+SWL
Sbjct: 241 LTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWL 300

Query: 301 LTTYLDEDLRISRGDGGSVFVLIKEGSALLSP 324
           LTTYLD++LRISRGD GSVFVLIKEGS LL P
Sbjct: 301 LTTYLDDELRISRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot
Match: O99019 (Light-induced protein, chloroplastic OS=Solanum demissum OX=50514 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-112
Identity = 225/332 (67.77%), Postives = 255/332 (76.81%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIG-----AGVRAAAGKSPISARLAF 60
           MA +S  NQ+PCKTL +     +  SK S  PI S          R+ + K   + +  F
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 61  KVRAVVND--DEWGAEKDE--PYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTN 120
             +A   D  DEWG E ++  P G      VA  EEE P EPSEI  LKK L DS  GTN
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGG------VAVVEEEPPKEPSEIELLKKQLADSLYGTN 120

Query: 121 RGLQASSETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFP 180
           RGL ASSETRA+IVELITQLE+KNP PAPTEAL+LLNGKWILAYTSFSGL+PLLSR   P
Sbjct: 121 RGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLP 180

Query: 181 LVKVEEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQ 240
           LV+VEEISQTIDSESFTVQNSV F+GPLATTSISTNAKFEVRSP+RVQIKFEEG+IGTPQ
Sbjct: 181 LVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQ 240

Query: 241 LTDSVVIPENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWL 300
           LTDS+V+PENVEFLGQKID+SPF G+ITSVQDTAS+V K+ISS+PPIKF   N+ A+SWL
Sbjct: 241 LTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWL 300

Query: 301 LTTYLDEDLRISRGDGGSVFVLIKEGSALLSP 324
           LTTYLD++LRI RGD GSVFVLIKEGS LL P
Sbjct: 301 LTTYLDDELRIPRGDAGSVFVLIKEGSPLLKP 326

[Close]

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot
Match: Q94KU6 (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris OX=3711 GN=PAP2 PE=1 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-105
Identity = 211/325 (64.92%), Postives = 256/325 (78.77%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKP--SIFPIGSIGAGVRAAAGKSPISARLAFKVR 60
           MA V  FNQ PCKT   +    + +SKP  S+ P+ ++        G+  +S R  F+VR
Sbjct: 1   MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSALTRRPSFPPGEFAVS-RSDFRVR 60

Query: 61  AVVNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASS 120
            +  +DE   E  E  G   A+ +AEE  E  +E +E+  LK++LVDS  GT+RGL ASS
Sbjct: 61  VIDAEDELDPETSE--GGGSALLMAEEAIES-VEETEV--LKRSLVDSLYGTDRGLSASS 120

Query: 121 ETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEI 180
           ETRA+I +LITQLE+KNPTPAPT+AL LLNGKWILAYTSF GL+PLLSR   PLVKV+EI
Sbjct: 121 ETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEI 180

Query: 181 SQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVI 240
           SQTIDS++FTV+NSV F+GPLATTSISTNAKFE+RSP+RVQIKFEEGVIGTPQLTDS+ I
Sbjct: 181 SQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEI 240

Query: 241 PENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDE 300
           PE VEFLGQKIDL+P  G++TSVQDTA++VA+TISS+PP+KFS P   A+SWLLTTYLD+
Sbjct: 241 PEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDK 300

Query: 301 DLRISRGDGGSVFVLIKEGSALLSP 324
           D+RISRGDGGSVFVLIKEGS LL+P
Sbjct: 301 DIRISRGDGGSVFVLIKEGSPLLNP 319

[Close]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL
Match: A0A6J1EG95 (chromoplast-specific carotenoid-associated protein, chromoplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433826 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.5e-154
Identity = 290/323 (89.78%), Postives = 302/323 (93.50%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQ ISKPSIFPI SIGAG R AAGKS ISAR AFK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPAFKIRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
            NDDEWG EK EPY D  AVAVAEEE   PLE SEIYKLKKALVDSF GT+RGL+ASSET
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEE---PLEQSEIYKLKKALVDSFYGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSGL+PLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+Q+TASNVAKTISS+PPIKFS PN+K ESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGD GSVFVLIKEGSALLSP
Sbjct: 301 RISRGDVGSVFVLIKEGSALLSP 320

[Close]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL
Match: A0A6J1KPC6 (chromoplast-specific carotenoid-associated protein, chromoplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111497075 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 288/323 (89.16%), Postives = 300/323 (92.88%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQ ISKPSIFPI SIGAG R AAGKS ISAR  FK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPVFKIRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
            NDDEWG EK EPY D  AVAVAEEE   PLE SEIYKLKKALVDSF GT+RGL+ASSET
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEE---PLEQSEIYKLKKALVDSFYGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSGL+PLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+Q+TASNVAKTISS+PPIKFS PN+K ESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGD GSVFVLIKEGSALL P
Sbjct: 301 RISRGDVGSVFVLIKEGSALLLP 320

[Close]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL
Match: A0A5D3CPQ9 (Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006140 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.0e-152
Identity = 278/323 (86.07%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQL SKPSIFPI SIGAG RAAAGKS IS R +FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
           +NDDEWG EK+E YGD  AVAVAEEEEEKP+EPSEIYKLKKALVDSF GT+RGL+ S +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVAVAEEEEEKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLE+KNPTPAPTEAL+LLNGKWIL YTSFSGL+PLLSR T PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDS+VIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NV+FLGQKIDLSPFNGII+S+QDTASNVAKTISS+PP+KFS  N+K ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGDGGSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL
Match: A0A1S3B0U1 (chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis melo OX=3656 GN=LOC103484642 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.0e-152
Identity = 278/323 (86.07%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQL SKPSIFPI SIGAG RAAAGKS IS R +FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
           +NDDEWG EK+E YGD  AVAVAEEEEEKP+EPSEIYKLKKALVDSF GT+RGL+ S +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVAVAEEEEEKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLE+KNPTPAPTEAL+LLNGKWIL YTSFSGL+PLLSR T PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDS+VIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NV+FLGQKIDLSPFNGII+S+QDTASNVAKTISS+PP+KFS  N+K ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGDGGSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL
Match: A0A6J1BTW7 (chromoplast-specific carotenoid-associated protein, chromoplastic OS=Momordica charantia OX=3673 GN=LOC111005649 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 8.9e-147
Identity = 281/329 (85.41%), Postives = 299/329 (90.88%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPIS------ARLA 60
           MAFVSQFNQLPCKTLSLNPP PQL SKPSIF I SIG G R AAGKS IS      AR A
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPHPQLSSKPSIFTINSIGTGAR-AAGKSAISAREFVWARPA 60

Query: 61  FKVRAVVNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGL 120
           FKVRAV NDDEWG EK+EP+GD   VAVA EEEEKPLEPSEIY+LKKALVDSF GT+RGL
Sbjct: 61  FKVRAVENDDEWGYEKEEPFGDGSGVAVA-EEEEKPLEPSEIYRLKKALVDSFYGTDRGL 120

Query: 121 QASSETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVK 180
            ASSETRA+IVELITQLEAKNPTPAPTEA+SLLNGKWILAYTSFSGL+PLLSR T PLVK
Sbjct: 121 GASSETRAEIVELITQLEAKNPTPAPTEAISLLNGKWILAYTSFSGLFPLLSRSTLPLVK 180

Query: 181 VEEISQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTD 240
           VEEISQTIDSE FTVQNSVQFSGPLATTSISTNA FEVRSPQRVQIKFEEGVIGTPQLTD
Sbjct: 181 VEEISQTIDSEGFTVQNSVQFSGPLATTSISTNATFEVRSPQRVQIKFEEGVIGTPQLTD 240

Query: 241 SVVIPENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTT 300
           S+VIPENVEF GQKIDL+PF+GII+S+++TAS+VAKTISS+PPIKFS  N+KAESWLLTT
Sbjct: 241 SLVIPENVEFFGQKIDLTPFHGIISSIENTASSVAKTISSQPPIKFSISNTKAESWLLTT 300

Query: 301 YLDEDLRISRGDGGSVFVLIKEGSALLSP 324
           YLDEDLRISRGDGGSV+VLIKEGSALLSP
Sbjct: 301 YLDEDLRISRGDGGSVYVLIKEGSALLSP 327

[Close]

BLAST of Lsi01G004630 vs. NCBI nr
Match: XP_038882507.1 (chromoplast-specific carotenoid-associated protein, chromoplastic [Benincasa hispida])

HSP 1 Score: 595.5 bits (1534), Expect = 2.7e-166
Identity = 306/323 (94.74%), Postives = 316/323 (97.83%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQ NQLPCKTLSLNPPQPQLISKPSI PIGSIGAGVRAAAGKSPISAR AFKVRAV
Sbjct: 1   MAFVSQLNQLPCKTLSLNPPQPQLISKPSIVPIGSIGAGVRAAAGKSPISARPAFKVRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
           VNDDEWGAEKDEPYGD PAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGT+RGL+ASSET
Sbjct: 61  VNDDEWGAEKDEPYGDGPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSG+YPLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGMYPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSLVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+QDTASNVA+TISS+PPIKFS PNS AESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQDTASNVARTISSQPPIKFSIPNSNAESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGDGGSVFVLIKEGSALLSP
Sbjct: 301 RISRGDGGSVFVLIKEGSALLSP 323

[Close]

BLAST of Lsi01G004630 vs. NCBI nr
Match: XP_022926829.1 (chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 1.6e-153
Identity = 290/323 (89.78%), Postives = 302/323 (93.50%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQ ISKPSIFPI SIGAG R AAGKS ISAR AFK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPAFKIRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
            NDDEWG EK EPY D  AVAVAEEE   PLE SEIYKLKKALVDSF GT+RGL+ASSET
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEE---PLEQSEIYKLKKALVDSFYGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSGL+PLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+Q+TASNVAKTISS+PPIKFS PN+K ESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGD GSVFVLIKEGSALLSP
Sbjct: 301 RISRGDVGSVFVLIKEGSALLSP 320

[Close]

BLAST of Lsi01G004630 vs. NCBI nr
Match: KAG6594684.1 (Chromoplast-specific carotenoid-associated protein, chromoplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026652.1 Chromoplast-specific carotenoid-associated protein, chromoplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 551.6 bits (1420), Expect = 4.5e-153
Identity = 289/323 (89.47%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQ ISKPSIFPI SIG G R AAGKS ISAR AFK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGVGARVAAGKSAISARPAFKIRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
            NDDEWG EK EPY D  AVAVAEEE   PLE SEIYKLKKALVDSF GT+RGL+ASSET
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEE---PLEQSEIYKLKKALVDSFYGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSGL+PLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+Q+TASNVAKTISS+PPIKFS PN+K ESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGD GSVFVLIKEGSALLSP
Sbjct: 301 RISRGDVGSVFVLIKEGSALLSP 320

[Close]

BLAST of Lsi01G004630 vs. NCBI nr
Match: XP_023003471.1 (chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbita maxima])

HSP 1 Score: 549.3 bits (1414), Expect = 2.2e-152
Identity = 288/323 (89.16%), Postives = 300/323 (92.88%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTLSLNPPQPQ ISKPSIFPI SIGAG R AAGKS ISAR  FK+RAV
Sbjct: 1   MAFVSQFNQLPCKTLSLNPPQPQPISKPSIFPISSIGAGARVAAGKSAISARPVFKIRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
            NDDEWG EK EPY D  AVAVAEEE   PLE SEIYKLKKALVDSF GT+RGL+ASSET
Sbjct: 61  GNDDEWGEEKVEPYDDGSAVAVAEEE---PLEQSEIYKLKKALVDSFYGTDRGLRASSET 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLEAKNPTPAPTEAL+LLNGKWILAYTSFSGL+PLLSR TFPLVKVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNGKWILAYTSFSGLFPLLSRSTFPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDS+VIPE
Sbjct: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSIVIPE 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NVEFLGQKIDLSPFNGII+S+Q+TASNVAKTISS+PPIKFS PN+K ESWLLTTYLDEDL
Sbjct: 241 NVEFLGQKIDLSPFNGIISSIQNTASNVAKTISSQPPIKFSIPNTKPESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGD GSVFVLIKEGSALL P
Sbjct: 301 RISRGDVGSVFVLIKEGSALLLP 320

[Close]

BLAST of Lsi01G004630 vs. NCBI nr
Match: XP_008440050.1 (PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplastic [Cucumis melo] >TYK13014.1 chromoplast-specific carotenoid-associated protein, chromoplastic [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-151
Identity = 278/323 (86.07%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRAV 60
           MAFVSQFNQLPCKTL+LNPPQPQL SKPSIFPI SIGAG RAAAGKS IS R +FKVRAV
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSIFPIASIGAGARAAAGKSLISVRPSFKVRAV 60

Query: 61  VNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSET 120
           +NDDEWG EK+E YGD  AVAVAEEEEEKP+EPSEIYKLKKALVDSF GT+RGL+ S +T
Sbjct: 61  LNDDEWGEEKEEKYGDGSAVAVAEEEEEKPMEPSEIYKLKKALVDSFYGTDRGLRVSRDT 120

Query: 121 RADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQ 180
           RA+IVELITQLE+KNPTPAPTEAL+LLNGKWIL YTSFSGL+PLLSR T PLVKVEEISQ
Sbjct: 121 RAEIVELITQLESKNPTPAPTEALTLLNGKWILQYTSFSGLFPLLSRNTLPLVKVEEISQ 180

Query: 181 TIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPE 240
           TIDSE+ TVQNSVQFSGPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQLTDS+VIP+
Sbjct: 181 TIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPD 240

Query: 241 NVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDL 300
           NV+FLGQKIDLSPFNGII+S+QDTASNVAKTISS+PP+KFS  N+K ESWLLTTYLDEDL
Sbjct: 241 NVDFLGQKIDLSPFNGIISSIQDTASNVAKTISSQPPLKFSISNTKVESWLLTTYLDEDL 300

Query: 301 RISRGDGGSVFVLIKEGSALLSP 324
           RISRGDGGSVFVL+KEGSALLSP
Sbjct: 301 RISRGDGGSVFVLLKEGSALLSP 323

[Close]

BLAST of Lsi01G004630 vs. TAIR 10
Match: AT4G04020.1 (fibrillin )

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-106
Identity = 209/325 (64.31%), Postives = 253/325 (77.85%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKTLSLNPPQPQLISK-PSIFPIGSIGAGVRAAAGKSPISARLAFKVRA 60
           MA V  F Q PCKTL+ +    +  SK P + PI SI    R+  G S    R  FK+RA
Sbjct: 1   MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINR--RSEIGVS--VHRPDFKIRA 60

Query: 61  VVNDDEWGAE-KDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASS 120
              DDEWG +  +  +  S  V+VA++  E      E  +LK++L DS  GT+RGL  SS
Sbjct: 61  TDIDDEWGQDGVERVFASSSTVSVADKAIE---SVEETERLKRSLADSLYGTDRGLSVSS 120

Query: 121 ETRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEI 180
           +TRA+I ELITQLE+KNPTPAP EAL LLNGKWILAYTSF GL+PLLSRR  PLVKV+EI
Sbjct: 121 DTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEI 180

Query: 181 SQTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVI 240
           SQTIDS+SFTVQNSV+F+GP +TTS STNAKFE+RSP+RVQIKFE+GVIGTPQLTDS+ I
Sbjct: 181 SQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEI 240

Query: 241 PENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDE 300
           PE+VE LGQKIDL+P  G++TSVQDTAS+VA+TIS++PP+KFS P+   +SWLLTTYLD+
Sbjct: 241 PESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDK 300

Query: 301 DLRISRGDGGSVFVLIKEGSALLSP 324
           DLRISRGDGGSV+VLIKEGS+LL+P
Sbjct: 301 DLRISRGDGGSVYVLIKEGSSLLNP 318

[Close]

BLAST of Lsi01G004630 vs. TAIR 10
Match: AT4G22240.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 369.0 bits (946), Expect = 3.9e-102
Identity = 201/324 (62.04%), Postives = 245/324 (75.62%), Query Frame = 0


Query: 1   MAFVSQFNQLPCKT-LSLNPPQPQLISKPSIFPIGSIGAGVRAAAGKSPISARLAFKVRA 60
           MA V    Q  C+T +S++P    +   P + P+ SI      + G   +S R  FKVRA
Sbjct: 1   MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSIIHRPMISTGGIAVSPRRVFKVRA 60

Query: 61  VVNDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSE 120
                          G+  +  +A EE  + +E +E  +LK++LVDS  GT+RGL ASSE
Sbjct: 61  T------------DTGEIGSALLAAEEAIEDVEETE--RLKRSLVDSLYGTDRGLSASSE 120

Query: 121 TRADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEIS 180
           TRA+I +LITQLE+KNPTPAPTEAL LLNGKWILAYTSF  L+PLLSR   PL+KV+EIS
Sbjct: 121 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 180

Query: 181 QTIDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIP 240
           QTIDS++FTVQNSV+F+GPL T SISTNAKFE+RSP+RVQIKFE+GVIGTPQLTDS+ IP
Sbjct: 181 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIP 240

Query: 241 ENVEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDED 300
           E VE LGQKIDL+P  G++TSVQDTAS+VA+TISS+PP+KFS P   A+SWLLTTYLD+D
Sbjct: 241 EYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKD 300

Query: 301 LRISRGDGGSVFVLIKEGSALLSP 324
           +RISRGDGGSVFVLIKEGS LL+P
Sbjct: 301 IRISRGDGGSVFVLIKEGSPLLNP 310

[Close]

BLAST of Lsi01G004630 vs. TAIR 10
Match: AT2G35490.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-61
Identity = 124/260 (47.69%), Postives = 170/260 (65.38%), Query Frame = 0


Query: 62  NDDEWGAEKDEPYGDSPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGLQASSETR 121
           N+DEWG E     G++ A A        P      ++LK+ L DS  GT  G +A SE R
Sbjct: 124 NEDEWGGEIG---GETEADAGNGSAVSDP-----TWELKRCLADSVYGTELGFKAGSEVR 183

Query: 122 ADIVELITQLEAKNPTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRTFPLVKVEEISQT 181
           A+++EL+ QLEA NPTPAP E   LL+G W+L YT+FS L PLL+  + PL+KV+ ISQ+
Sbjct: 184 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQS 243

Query: 182 IDSESFTVQNSVQFSGPLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPEN 241
           ID+ +  + NS   S P A  S S  A FEVRSP R+++ F+EG +  P +  SV +PE+
Sbjct: 244 IDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPES 303

Query: 242 VEFLGQKIDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDLR 301
           V   GQ+I LS     +  +QD A+N+++ +S +PP+K  FP ++  SWLLTTYLD+DLR
Sbjct: 304 VGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLR 363

Query: 302 ISRGDGGSVFVLIKEGSALL 322
           ISRGDGG +FVL +EGS+LL
Sbjct: 364 ISRGDGG-LFVLAREGSSLL 374

[Close]

BLAST of Lsi01G004630 vs. TAIR 10
Match: AT5G09820.2 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-10
Identity = 65/245 (26.53%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 77  SPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGL-QASSETRADIVELITQLEAKN 136
           SP     +EE+E+  E   +  +K+ L ++  G NRG+    S+ + +I  L+  LE +N
Sbjct: 64  SPNEQQQDEEQEQEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRN 123

Query: 137 PTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRT----FPLVKVEEISQTIDSESFTVQN 196
           PTP PT  L  + G W L Y++ +    L S+RT       V + ++ Q ID       +
Sbjct: 124 PTPEPTGELDKIGGCWKLIYSTIT---VLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVH 183

Query: 197 SVQFSG---PLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPENVEFLGQK 256
            ++F      L        A F++ S   V+I +E   I   QL +  +  +N++ L   
Sbjct: 184 VLKFDVRGLNLLDGEFRIVASFKISSKSSVEITYESSTIKPDQLMN--IFRKNMDLL--- 243

Query: 257 IDLSPFNGIITSVQDTASNVAKTISSRPPIKFSFPNSKAESWLLTTYLDEDLRISRGDGG 314
             L  FN                                E     +YLDEDL++ R   G
Sbjct: 244 --LGIFN-------------------------------PEGLFEISYLDEDLQVGRDGKG 267

[Close]

BLAST of Lsi01G004630 vs. TAIR 10
Match: AT5G09820.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-08
Identity = 49/177 (27.68%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 77  SPAVAVAEEEEEKPLEPSEIYKLKKALVDSFDGTNRGL-QASSETRADIVELITQLEAKN 136
           SP     +EE+E+  E   +  +K+ L ++  G NRG+    S+ + +I  L+  LE +N
Sbjct: 64  SPNEQQQDEEQEQEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRN 123

Query: 137 PTPAPTEALSLLNGKWILAYTSFSGLYPLLSRRT----FPLVKVEEISQTIDSESFTVQN 196
           PTP PT  L  + G W L Y++ +    L S+RT       V + ++ Q ID       +
Sbjct: 124 PTPEPTGELDKIGGCWKLIYSTIT---VLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVH 183

Query: 197 SVQFSG---PLATTSISTNAKFEVRSPQRVQIKFEEGVIGTPQLTDSVVIPENVEFL 246
            ++F      L        A F++ S   V+I +E   I   QL +  +  +N++ L
Sbjct: 184 VLKFDVRGLNLLDGEFRIVASFKISSKSSVEITYESSTIKPDQLMN--IFRKNMDLL 235

The following BLAST results are available for this feature:

BLAST of Lsi01G004630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96398	2.0e-148	83.54	Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis sat...	[more]
Q9ZWQ8	2.3e-123	72.56	Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu OX=55188 GN=PAP...	[more]
P80471	9.6e-114	68.67	Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2	[more]
O99019	2.4e-112	67.77	Light-induced protein, chloroplastic OS=Solanum demissum OX=50514 PE=1 SV=1	[more]
Q94KU6	1.3e-105	64.92	Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris OX=3711...	[more]

BLAST of Lsi01G004630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EG95	7.5e-154	89.78	chromoplast-specific carotenoid-associated protein, chromoplastic-like OS=Cucurb...	[more]
A0A6J1KPC6	1.1e-152	89.16	chromoplast-specific carotenoid-associated protein, chromoplastic-like OS=Cucurb...	[more]
A0A5D3CPQ9	7.0e-152	86.07	Chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis mel...	[more]
A0A1S3B0U1	7.0e-152	86.07	chromoplast-specific carotenoid-associated protein, chromoplastic OS=Cucumis mel...	[more]
A0A6J1BTW7	8.9e-147	85.41	chromoplast-specific carotenoid-associated protein, chromoplastic OS=Momordica c...	[more]

BLAST of Lsi01G004630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882507.1	2.7e-166	94.74	chromoplast-specific carotenoid-associated protein, chromoplastic [Benincasa his...	[more]
XP_022926829.1	1.6e-153	89.78	chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbit...	[more]
KAG6594684.1	4.5e-153	89.47	Chromoplast-specific carotenoid-associated protein, chromoplastic, partial [Cucu...	[more]
XP_023003471.1	2.2e-152	89.16	chromoplast-specific carotenoid-associated protein, chromoplastic-like [Cucurbit...	[more]
XP_008440050.1	1.5e-151	86.07	PREDICTED: chromoplast-specific carotenoid-associated protein, chromoplastic [Cu...	[more]

BLAST of Lsi01G004630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04020.1	3.4e-106	64.31	fibrillin	[more]
AT4G22240.1	3.9e-102	62.04	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT2G35490.1	1.1e-61	47.69	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G09820.2	2.7e-10	26.53	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G09820.1	4.3e-08	27.68	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 98..313 e-value: 1.7E-80 score: 269.6
IPR039633	Plastid-lipid-associated protein	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 5..323
None	No IPR available	PANTHER	PTHR31906:SF31	BNAC03G29750D PROTEIN	coord: 5..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004630.1	Lsi01G004630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009509	chromoplast