Lsi01G004510 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATTGCGGAGAGCAATGAGATTGGATGGGGAATCCTGGCGACGACGTCGTTTCATGGCGTTGCCTTCTTGTCCCTCGATTGCTTAACAGGAACGCCGAGAGCTCCCCCCTTCCTTCATTTGTACTCTCCTAGTAAAAAGCAATCTGGAGCAGGAAGATTCTTCTACGGACATGGCCTCCTCAGTCGCTATAGAAGGGGCCGGCGCCGCATCGGCGGCGCTCAGGTCTGTGCTCGAGCGCGTTCAGCGAGCCGCTGAACGGTCCGGTCGTGGGCCTCAGCAGATTCGAGTTGTAGCTGTTAGCAAGACCAAGCCGGTCTCCGTCATTCGTCAAGTCTACGATGCTGGCCACCGATGCTTTGGCGAGAATTACGTTCAGGAACTCGTTGAAAAAGCTCCTCAGGTTTTTTTTTCCCGCTTTTCTACGATTCCATATTTAGCTCTTGTGTTCAAGTTTTTAATTGTATGAGAATTAGTGGAATTTTGGAGAGAATTCATTGTCGATGATTCAGACTGGAACTACTTGACTTTGACGACCATTGGAAATTGCAGCTTCCGGAGGATATTGAATGGCATTTCATCGGAAATTTGCAGAGCAACAAAGTGAAACCACTTCTGTGTACGATCAAATCCTTCTTCTAAATAATATTTTTAGTGCAGTCTGGAGGCAATCCTATAGAATCTTGTTTACATGAGTTAAGTTTGCACACGATACGACTGTACAATTCAACTTACTCTGCAATCTCACAAGAATATTGTGATGTGCTCATATCAGTATAATAGTGCAGCAATTATAATTATAGAGTGCTCTCCACCTTCAACAAAAGCTATCTAAATACATGACATCCTAACTGAACTAACCAGCTGAATGAAACTAATTAACTAACACAGAAAAAATAATGCTGGGCTGGACAAATGATGCCGGTAGCTCCAATAAACTTGTAAAAATATAAATATCGAACTAGTTCGTGCTAGCCATTATAAAATCCAATAGACAGAATAACAAGCGTTATACTTGCTTCAGGCCTTCAGTGGAATCCCATGCTATAAGATGAGTCTTTTTTTTGGGGTGGTGGGGGGAATAAGAGATGATGTCATTGGGACAACGAATTCTGTCATAATTATAGAAGGGGAAGGAGAGCCTCAACCCATGCTATTGAAGTTGCAAAAGGACATTTTCAAGTACCAAGACTTCATAAGTCATAGTTACTTATAGGTTAGAAGAATTTGTCAAGTTTCATTTCTGACTCTGCACATAATTCATTAATTAGGAAATACACAGCTATTGGGATTCTTCTTTTAGGATCTTCATGATTATTTTGTACATTATGAGTTCCCAACTATAGATTTTCAACCTGTAAAGAGAAGAGCCCCTAGAGCCCCTTCTAAATTGACTTAAAGGTCCTGGTCAAGAACATGGGACTGTGGGAGTTATTGAAGACATCCTTTAATTGCAATTTACAACTAAAGTACATGTACGGTTGCTAAGCCAAAGCCACTTATCTTGACCAGAACTAGGCAAGAATTAGCAAGTATATGATGTAAATCCATTCTGGGCTTCTATGTCATTTAGGTTTCTCCTATCGTCAAGATCCATTAGGGAAATCAACATTGCAAATTTGGCGCAAGGAGAACTTTTTACTGTTGAATATAACATGAAGAACAGGTTATAATTTTTCACATTGAAGCCTTCAGCTAAGCCCAAATCAAAAGAGAAGTGTACTAAGACAATCCACTACTAGAGTCATAAGTAAAGTTCTCAGAGGATTGCTTGTCTAATACTCCTTGTCCTTGAGGCCGATCTTTTTCTCCTTGGCTTTCCATTCTTAATCAAATTTCGAGAGGCTTCATGACATGCTCTTTTAAGAGTTATGATTCTATTGGTTTGTTTTCATCCCTGTTATGTTCTATATTTTTGTTATTCACCACATTTCTCCAGTAGAGCATTCCCAATCTCATTGTAAGAGAAATTTTTCCTGTTATAATTGACCGCAAAAATTGATGAACTTTGCGTTTCATCTCCTTACTAAAGCTATTTAGACCTGCACTTTTGGCTCCAAAAACTCACATTTAAGAGTGTATCATGGAGCTGATATTTAATGAAGCTTCCAAATTTATTTATTTATTTATTTATTATTATTATTATTATTTGCTGGAAGAGAGGAAAGGAGTCTTCCAATCGATCTAAAGATTTAGTCTAAGCAATGATGCTGATTTTAGTGGAGCGAATAAAGCCAAACTCTTGAGTCCATTTCTTTAGGGAAGGCTTGAAAGATTTGCGGATAAATTTCATTTCACGTAGATTCCAATAGAAGAATAGTTTCAACTTTTTACGGAAGGAGGGATCCATTTGAAATTAGCAGCCACTAGCATCTTCAGTTTTCAGTCTAGATACCCTAGAGATCTTGTACTTAGAGATCCAATCTTGAGAAGCTAGGAATCTAGTTGCTGCCTGTAGATTGTTTATTGGATGCTACCATAATGGACATTGTTGGAGGTGTTCACATTGCCATGATTATTGCTTTACTCATGTCTAGGTCCTGGATCATTTTTGAAGACTTAAAACCATGCAAATTTTGCTTAAAAAAGTAGCATTTGACCATTGAAATCCAAACTTGCCTCCATTTCAAGATCAACCACGTGAGTTTCAACTTATTTTTCCATTACTCTAGAAAAATCATTTTCTTGATTTGCAAGCTTCAGTCCAGTATTTCCATTGGTTTCCACCATTGATATCTGCTTTATTTTGTTGAGTTTTAGCAGCTGGATCTGCTGTAGGTTGTAGTTTGACTAGGTGTATTTAAATTATACCATGTTTTTTTATGGTTAACTTTACAAACTCGACTCATGTTCATTTCGGACAAATTTTATTATTCTATTCATATCAATACATTAATAAAGCCATCTTTGAGCATTTGATGTGCTCAACTCAACTGCAAATAGTACTCATCTAAAGCTAGCCTAATGCATAATCGACCAACATGTATAAAATGTGACGCTGAGTTTGGTCATTTTCTTTCCTAACAAGGATAATTAAATTGGATAATTAGTTGGTTTGTCAGACTACAAATTTTTATATTCTGGCATTTCATCTAAGCAGCAGATTGTTTCTGACTTTTGTTTGCTTCTTTTCATCTGCTTTTGTTCCTTCATTTCTAACTGTTACTTTTAAATAACCATACAGCTGGCGTCCCAAACCTTGCAGTTGTAGAGAGTGTGGATGATGAAAAGGTACTCTTCTTATTAGTTAGCTGAACGCCTTTGATTTGAAGCTCATCTACACCTCAAAGTTTAATTGGAAGTTCTTAAAATCACTTTCCAATATTTTATTTCAATTATGCGTTGAATTTGGTTTTTAGCATGCTGTTGAAAGACTGTCATTGAATGGTAATTGAACTTGGTGATTGATTATGCTTTATGAACTGAAACAACTAACGTGCGGACCATTCTCAAGAAGTTTTCTATCTGTGTTTTTATTGATGATGATTTTCCATCAATTTTGGGTTCAGGCCTGCCTTCTCTTGTCTCGTTGGATTGGATCTTGCCTAACACTATGCTTTCATTTTTTTACAAAAAAAAAAAAAAAAAAAAAAATTAAAATGATTAACTTTGTTATTTTACGCTGTACACTATAACTTTCTTTTCAACTTGCTTAAAATATTTTCTCAGATTGCTAACCGTTTGGATCGGATGGTTGAAAGTATTGGGAGGAAGCCTCTCAAGGTGTTTATCCAAGTGAATACAAGTGGAGAAGAATGTAGGTTATTATTACTTGCAACGACTATAAGTTCTCTTAAAATGATGTTTATCACTTTGTAGAGTTTAATGATACAATTTAAGAGATTTGATTTGCAAGATTCTGGTTAAAAATTTATTGCTAGCGGAAGTATCTTATTGACCTACAGGATTGGGCAACAGTGTTATAATTGTTTGCATAAAGCATGCTCTAATTATTATTTTAAGTACTTAGTTCATTGGTAAATAGTTTTTGAACCCCCCCCCCACCACCTATCAGAATAAATTCCCTATTATCCTACGTGAAGCATTTAGGCTATGCAATACAGACATTTATGTTTCTCAGTTTTCTTGTGCTATCTGATTTCATAATACATTTAGACATAAAGATTCCTTTTCAACAGAGCTCTAACCTTCTTTTCTTTCTAGAATTGTCCAGATCAGAATCCAGACTGGCGAAGCTTGTCTGGTTTTTTATACCATTCATCGTATGGTTTTTCATCTGCTAGTAACCTTAGCATGATATTGGGACATTTATTAAAAATTAGATTGTTGATAGTGTATCTTTAAGGGTGATGTTATTATCTACTTGTATGTCAGGCAACTTTATTGCGTTAGATTTTTAACTTATCATAGAATGCTGTAGTCCTTCGATTAATGTTTTTCCTCTATTGAAGTGCAGCAAAATCAGGTGTTGAACCCTCTGGGTGCGTGGAGCTTGCTAAACATGTTAGTTTGAACTGCCCAAATCTTCAGTTTTCTGGACTAATGACAATTGGAATGTTAGATTATACATCCACACCAGAAAACTTCAAGGTGACAAAACCCTCGACTCCAGAGCCCAACCTCACCTTTCCCACCATTCCTCTGTTACGAGAAACCGATCAAGTTTCTTTGCACCTTATGCTCTTACTAATTGGTATATGTTGGTTGCAGTTATTGGCTAACTGTAGAACTGAGGTTTGCAAAGCACTTGAAATATCAGAAGAACAATGTGAGCTATCAATGGGAATGTCAGCAGACTTCGAACAAGCTGTAAGAATGATAATCTTTGTAATGCAGTATCTGCTTAATGGGATACATATATAATTGGCCTAAAGCATTGCTAAGCTGAACAAGTGTTTCTTAATTTTTCAGACATAACAATATGTTGAGAATCCCACATCGAAAAAATCAAGAGATCTCACACTTCTTATGATAGATAGGCTACTCCTCTCGTTATCAATTAGTTTTGAGATAGAACCCCGTGTTATCTAATAAATTTGTGTAGGAAGACGCATTAAAGAATGGTAATTAACTCTTACTTTGCATGTTTTGCAGGTTGAAATGGGAAGTACAAATGTGAGGATCGGATCTACCATATTTGGAGCGAGGGAATATCCCAAGAAAAAGTGAATTTCGCATGCTAGAGATCTATGAGCTTCTCGTGGTAATCATTTTGATGAAATAGTATACGTCTAATATATACCGATCTATAAATAATATCACAAAAGAAAGCATCCAACTTCAGTAATTATTAGTTAAGAACACTGAAGTGGGGGCTGTATGTTCAGGTCCATCTTTACTCCATCTGAAGAGAAGATGAATGAAGACAAGATTATACAGAAATTTGGATTCAACCGCAAACATTTTTTTTTTTTTTTT GAATTGCGGAGAGCAATGAGATTGGATGGGGAATCCTGGCGACGACGTCGTTTCATGGCGTTGCCTTCTTGTCCCTCGATTGCTTAACAGGAACGCCGAGAGCTCCCCCCTTCCTTCATTTGTACTCTCCTAGTAAAAAGCAATCTGGAGCAGGAAGATTCTTCTACGGACATGGCCTCCTCAGTCGCTATAGAAGGGGCCGGCGCCGCATCGGCGGCGCTCAGGTCTGTGCTCGAGCGCGTTCAGCGAGCCGCTGAACGGTCCGGTCGTGGGCCTCAGCAGATTCGAGTTGTAGCTGTTAGCAAGACCAAGCCGGTCTCCGTCATTCGTCAAGTCTACGATGCTGGCCACCGATGCTTTGGCGAGAATTACGTTCAGGAACTCGTTGAAAAAGCTCCTCAGCTTCCGGAGGATATTGAATGGCATTTCATCGGAAATTTGCAGAGCAACAAAGTGAAACCACTTCTGTCTGGCGTCCCAAACCTTGCAGTTGTAGAGAGTGTGGATGATGAAAAGATTGCTAACCGTTTGGATCGGATGGTTGAAAGTATTGGGAGGAAGCCTCTCAAGGTGTTTATCCAAGTGAATACAAGTGGAGAAGAATGTAGTGCAGCAAAATCAGGTGTTGAACCCTCTGGGTGCGTGGAGCTTGCTAAACATGTTAGTTTGAACTGCCCAAATCTTCAGTTTTCTGGACTAATGACAATTGGAATGTTAGATTATACATCCACACCAGAAAACTTCAAGTTATTGGCTAACTGTAGAACTGAGGTTTGCAAAGCACTTGAAATATCAGAAGAACAATGTGAGCTATCAATGGGAATGTCAGCAGACTTCGAACAAGCTGTTGAAATGGGAAGTACAAATGTGAGGATCGGATCTACCATATTTGGAGCGAGGGAATATCCCAAGAAAAAGTGAATTTCGCATGCTAGAGATCTATGAGCTTCTCGTGGTCCATCTTTACTCCATCTGAAGAGAAGATGAATGAAGACAAGATTATACAGAAATTTGGATTCAACCGCAAACATTTTTTTTTTTTTTTT ATGGCCTCCTCAGTCGCTATAGAAGGGGCCGGCGCCGCATCGGCGGCGCTCAGGTCTGTGCTCGAGCGCGTTCAGCGAGCCGCTGAACGGTCCGGTCGTGGGCCTCAGCAGATTCGAGTTGTAGCTGTTAGCAAGACCAAGCCGGTCTCCGTCATTCGTCAAGTCTACGATGCTGGCCACCGATGCTTTGGCGAGAATTACGTTCAGGAACTCGTTGAAAAAGCTCCTCAGCTTCCGGAGGATATTGAATGGCATTTCATCGGAAATTTGCAGAGCAACAAAGTGAAACCACTTCTGTCTGGCGTCCCAAACCTTGCAGTTGTAGAGAGTGTGGATGATGAAAAGATTGCTAACCGTTTGGATCGGATGGTTGAAAGTATTGGGAGGAAGCCTCTCAAGGTGTTTATCCAAGTGAATACAAGTGGAGAAGAATGTAGTGCAGCAAAATCAGGTGTTGAACCCTCTGGGTGCGTGGAGCTTGCTAAACATGTTAGTTTGAACTGCCCAAATCTTCAGTTTTCTGGACTAATGACAATTGGAATGTTAGATTATACATCCACACCAGAAAACTTCAAGTTATTGGCTAACTGTAGAACTGAGGTTTGCAAAGCACTTGAAATATCAGAAGAACAATGTGAGCTATCAATGGGAATGTCAGCAGACTTCGAACAAGCTGTTGAAATGGGAAGTACAAATGTGAGGATCGGATCTACCATATTTGGAGCGAGGGAATATCCCAAGAAAAAGTGA MASSVAIEGAGAASAALRSVLERVQRAAERSGRGPQQIRVVAVSKTKPVSVIRQVYDAGHRCFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLAVVESVDDEKIANRLDRMVESIGRKPLKVFIQVNTSGEECSAAKSGVEPSGCVELAKHVSLNCPNLQFSGLMTIGMLDYTSTPENFKLLANCRTEVCKALEISEEQCELSMGMSADFEQAVEMGSTNVRIGSTIFGAREYPKKK Homology
BLAST of Lsi01G004510 vs. ExPASy Swiss-Prot
Match: O94903 (Pyridoxal phosphate homeostasis protein OS=Homo sapiens OX=9606 GN=PLPBP PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.3e-54 Identity = 129/256 (50.39%), Postives = 171/256 (66.80%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy Swiss-Prot
Match: Q5R4Z1 (Pyridoxal phosphate homeostasis protein OS=Pongo abelii OX=9601 GN=PLPBP PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.6e-53 Identity = 126/256 (49.22%), Postives = 167/256 (65.23%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy Swiss-Prot
Match: Q9Z2Y8 (Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.6e-52 Identity = 120/244 (49.18%), Postives = 167/244 (68.44%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy Swiss-Prot
Match: Q3T0G5 (Pyridoxal phosphate homeostasis protein OS=Bos taurus OX=9913 GN=PLPBP PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52 Identity = 125/256 (48.83%), Postives = 171/256 (66.80%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy Swiss-Prot
Match: Q1ZXI6 (Pyridoxal phosphate homeostasis protein OS=Dictyostelium discoideum OX=44689 GN=prosc PE=3 SV=2) HSP 1 Score: 203.0 bits (515), Expect = 4.0e-51 Identity = 116/250 (46.40%), Postives = 163/250 (65.20%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy TrEMBL
Match: A0A5D3CN93 (Pyridoxal phosphate homeostasis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006260 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 233/249 (93.57%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy TrEMBL
Match: A0A1S4DU01 (Pyridoxal phosphate homeostasis protein OS=Cucumis melo OX=3656 GN=LOC103484633 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 233/249 (93.57%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy TrEMBL
Match: A0A0A0KJU8 (Pyridoxal phosphate homeostasis protein OS=Cucumis sativus OX=3659 GN=Csa_6G513480 PE=3 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-120 Identity = 231/248 (93.15%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy TrEMBL
Match: A0A6J1GDI5 (Pyridoxal phosphate homeostasis protein OS=Cucurbita moschata OX=3662 GN=LOC111453185 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119 Identity = 228/248 (91.94%), Postives = 236/248 (95.16%), Query Frame = 0
BLAST of Lsi01G004510 vs. ExPASy TrEMBL
Match: A0A6J1IR98 (Pyridoxal phosphate homeostasis protein OS=Cucurbita maxima OX=3661 GN=LOC111478659 PE=3 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.1e-119 Identity = 227/248 (91.53%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Lsi01G004510 vs. NCBI nr
Match: XP_038883655.1 (pyridoxal phosphate homeostasis protein [Benincasa hispida]) HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127 Identity = 240/249 (96.39%), Postives = 243/249 (97.59%), Query Frame = 0
BLAST of Lsi01G004510 vs. NCBI nr
Match: XP_016899180.1 (PREDICTED: proline synthase co-transcribed bacterial homolog protein [Cucumis melo]) HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121 Identity = 233/249 (93.57%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Lsi01G004510 vs. NCBI nr
Match: TYK13025.1 (proline synthase co-transcribed bacterial-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121 Identity = 233/249 (93.57%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Lsi01G004510 vs. NCBI nr
Match: XP_011658131.1 (pyridoxal phosphate homeostasis protein [Cucumis sativus] >XP_031743355.1 pyridoxal phosphate homeostasis protein [Cucumis sativus] >XP_031743356.1 pyridoxal phosphate homeostasis protein [Cucumis sativus] >KGN49084.1 hypothetical protein Csa_003844 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 3.9e-120 Identity = 231/248 (93.15%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Lsi01G004510 vs. NCBI nr
Match: XP_022949943.1 (pyridoxal phosphate homeostasis protein [Cucurbita moschata] >XP_023544276.1 pyridoxal phosphate homeostasis protein [Cucurbita pepo subsp. pepo] >KAG6603793.1 Pyridoxal phosphate homeostasis protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033963.1 Pyridoxal phosphate homeostasis protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119 Identity = 228/248 (91.94%), Postives = 236/248 (95.16%), Query Frame = 0
BLAST of Lsi01G004510 vs. TAIR 10
Match: AT1G11930.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 382.5 bits (981), Expect = 2.6e-106 Identity = 196/246 (79.67%), Postives = 214/246 (86.99%), Query Frame = 0
BLAST of Lsi01G004510 vs. TAIR 10
Match: AT1G11930.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 377.5 bits (968), Expect = 8.4e-105 Identity = 196/248 (79.03%), Postives = 214/248 (86.29%), Query Frame = 0
BLAST of Lsi01G004510 vs. TAIR 10
Match: AT4G26860.1 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 350.9 bits (899), Expect = 8.4e-97 Identity = 168/235 (71.49%), Postives = 203/235 (86.38%), Query Frame = 0
BLAST of Lsi01G004510 vs. TAIR 10
Match: AT4G26860.2 (Predicted pyridoxal phosphate-dependent enzyme, YBL036C type ) HSP 1 Score: 343.6 bits (880), Expect = 1.3e-94 Identity = 168/245 (68.57%), Postives = 204/245 (83.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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