Lsi01G004390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G004390
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionU3 small nucleolar RNA-associated protein 6 homolog
Locationchr01: 3671018 .. 3674751 (+)
RNA-Seq ExpressionLsi01G004390
SyntenyLsi01G004390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATACAAAGGATTGGGCTTTAACATTGTTGTAAGTAGCTTCAATGGCCCAGCCCATAACCAATAACCATTCGAAATTCTCTTCGTCTTCTTCATAACCTTTCTGTATCGCCGCCCTAAAAGCCGTTTCCGAGAGCGAAGCCCTCCTCGTCGTTCAGCTTCATTCCCTCCGAGTCCCCTCTTACCCAGCGAGACCATGGCGGACGTTGTGCAGTTCCGACTCGAAGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGTAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGATCCATTTGGAATCGCTTCGCCGTCTAAGGAAGAAGGCAGTGGCTCGCGAGCTTAAGAAGCAAGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGCGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAAGTATAAGGGTGATATTGATCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTATTACATTTTATTCCCCTTTCAGGTTAAATATAGTTTCTGTTGGTATTTCGATATAGAAGGGGAGAAATTAATGTACATTTTGATCCCTGGGCCTATTGTTGTAGAACTGAGATGATATGAAGGTAGTTGAAGTCAGTCTTTTGATACTTGAGGTTACTTGTGTCGATATCAATCGTTTTTCTTCCAACTTTTGCAGGTTCTGGCTCAGCTGATTAGGTTTCACCCAAAAGTTCCAGGGGTTTGGATATATGCTGCTGCATGGGAGTTTGACCATAATAGCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATCTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGGCGAGGGAAGTTTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGGTGAAGCAAGGAAAGATAATGATGGATCAGTTGTTGAAACGGAGTCGAAGAATAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAATGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCGAAAATATTACAGGATATAAAAAGAGACTTCGCTACACAACCAGAATTTTGGGACTGGCTGGCTAGACTTCAATGTTATCCTGAAAATGTACAGGGAATGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCCAGGTGTGGATTTTATGCATGATAGAAATCACAATTCTGTCAAATCTGCATAGTTATCTTATGTCTATTATTTTCTTCATTGATGATAAATGGTAGTTTAAGGAAACATATATTTCTTTATTAAAAAGATTACTAGCTTTAGAAAAGTATGTATGATCTTTGTTTACTTAAAACATGACTAAATAAAAATTACATATACAACTTATGTGCCTGCTTTTTCTCTATGAGTATCTAAGGCTTGTTTTTTCCATGCCAATCAACAACAGGTCTACGAGGAAGGCCTGGAGCGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATTATTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACCGAGAACATTACTTCACGACTCTTGATGGTGTATGAAAAGGCTCTAACTTTAGGACACATTACAGATGATTTAGCATGCCAATATGTTTTGTTTTATCTGGAACTTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATATTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATCTTTGAACTGACAAAAGAGGTTCTGAGAGATGTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTATATCTGCTGCACCTTAACAAAACTTCAAACCCTGATATACTCAGTTTTCTGAAAAACAATATCGATCTTAGAATTAAGCTGATTTTGTGGTTCGAGATATGCGCTCTTAGCTATTAAAATGCTTTCATGGCATTGCTCACTCGAGCTTACATGTTTAATTTATTTAGAATGTTCGAGACATTGAGATGTTGGTGGTTATTAGAAGTAAAAATCTGAGCCCTTATTATTCTGGTTTACCCACTGCAGGTCCTCAAGTTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGAGAAGTGTATAAGAAGTATGTCATTCCAACACCAGATAATTCTTCTTGTTTAAAATTATTTTGGTATCTGCATTTTGAGTCACTTCTACATTAGTCCATCAAGTTTATATTTAGCTTTCTACTTTCAACAAACCTTAAAGTTAGTCACTATTGTTAGTTTGAACTTAGTTTTAGTGGACCAAAATGGTATTCGAATTGTTTTTCTTTTATAAGAGTATCTGCTTTTCCAAGTTGCCTAGTTCAGTTTCTAAAATCTTGTTTCTCTTGTTTCAACAGATTTCTTGGATTACCCCATCCTGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATATGAATCTGCACTTACAACTTATGGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTAAGGTAACCCTGCAGTTTCAATATAATCCGGAAATGTACATGACATTTAATTGTTTTTCTATTTAGTCCTCCCCCATTGGTCATGGTTATGGTCCTTACGGAGTCATGCTACTTTACTTTAGATCAATCATGACCATTATCTTTTCCATTGATTCGGTGTAACCGTCCTGTATGTATTATTTCCACCATCGTGTCCATTTTGTTAGAAAGGGCTATCTTTCTTCATTCTTTGTCAACTACGTGCCAATGGCAGGACAAACAAATTACATCATTGTTGTTTTTTCCTGCTACATTTTAGTTGAGGTGTTGTCCATTTATCCTCCAATGTATTCATGAGTTCGTTCTTCCTGCTGATTTTACAGATAGGATCATCAGAAACAGCAGCTGCAATTCGTTGGCGTGCGAGGAAAACATTAAAAGACGCTACAGCCCTTATTACTAGCTCTGATTTGTGATTTTTTATAAATTTTTCTTGTATATTTATCAAATCAATTTTGACCTTTTATGTAGAATGGTTAATTGTGATTGAATGTTGGCGGTTGGAAACAGATATAAATTTCTATCTGTATCCCAAAGGATATGAGATAAGAGCTGTATTCTATGTGGATAGGATTATCGTAACATCTAAGAACTTTGACAAGAAATATCATTTGGAAGGAAAAAACCGCTTAAAGAATAGTATGCAAATTTACTATAAATTTAGCCA

mRNA sequence

AAAATACAAAGGATTGGGCTTTAACATTGTTGTAAGTAGCTTCAATGGCCCAGCCCATAACCAATAACCATTCGAAATTCTCTTCGTCTTCTTCATAACCTTTCTGTATCGCCGCCCTAAAAGCCGTTTCCGAGAGCGAAGCCCTCCTCGTCGTTCAGCTTCATTCCCTCCGAGTCCCCTCTTACCCAGCGAGACCATGGCGGACGTTGTGCAGTTCCGACTCGAAGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGTAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGATCCATTTGGAATCGCTTCGCCGTCTAAGGAAGAAGGCAGTGGCTCGCGAGCTTAAGAAGCAAGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGCGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAAGTATAAGGGTGATATTGATCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTTCTGGCTCAGCTGATTAGGTTTCACCCAAAAGTTCCAGGGGTTTGGATATATGCTGCTGCATGGGAGTTTGACCATAATAGCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATCTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGGCGAGGGAAGTTTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGGTGAAGCAAGGAAAGATAATGATGGATCAGTTGTTGAAACGGAGTCGAAGAATAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAATGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCGAAAATATTACAGGATATAAAAAGAGACTTCGCTACACAACCAGAATTTTGGGACTGGCTGGCTAGACTTCAATGTTATCCTGAAAATGTACAGGGAATGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCCAGGTCTACGAGGAAGGCCTGGAGCGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATTATTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACCGAGAACATTACTTCACGACTCTTGATGGTGTATGAAAAGGCTCTAACTTTAGGACACATTACAGATGATTTAGCATGCCAATATGTTTTGTTTTATCTGGAACTTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATATTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATCTTTGAACTGACAAAAGAGGTTCTGAGAGATGTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTCCTCAAGTTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGAGAAGTGTATAAGAAATTTCTTGGATTACCCCATCCTGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATATGAATCTGCACTTACAACTTATGGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTAAGATAGGATCATCAGAAACAGCAGCTGCAATTCGTTGGCGTGCGAGGAAAACATTAAAAGACGCTACAGCCCTTATTACTAGCTCTGATTTGTGATTTTTTATAAATTTTTCTTGTATATTTATCAAATCAATTTTGACCTTTTATGTAGAATGGTTAATTGTGATTGAATGTTGGCGGTTGGAAACAGATATAAATTTCTATCTGTATCCCAAAGGATATGAGATAAGAGCTGTATTCTATGTGGATAGGATTATCGTAACATCTAAGAACTTTGACAAGAAATATCATTTGGAAGGAAAAAACCGCTTAAAGAATAGTATGCAAATTTACTATAAATTTAGCCA

Coding sequence (CDS)

ATGGCGGACGTTGTGCAGTTCCGACTCGAAGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCGGCGTAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGATCCATTTGGAATCGCTTCGCCGTCTAAGGAAGAAGGCAGTGGCTCGCGAGCTTAAGAAGCAAGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGCGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAAGTATAAGGGTGATATTGATCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTTCTGGCTCAGCTGATTAGGTTTCACCCAAAAGTTCCAGGGGTTTGGATATATGCTGCTGCATGGGAGTTTGACCATAATAGCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGGATCTTTGGGTAGAATATCTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGGCGAGGGAAGTTTGGTCCGTGAAAATATAGCTGCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGGTGAAGCAAGGAAAGATAATGATGGATCAGTTGTTGAAACGGAGTCGAAGAATAAATTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACAATGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCGAAAATATTACAGGATATAAAAAGAGACTTCGCTACACAACCAGAATTTTGGGACTGGCTGGCTAGACTTCAATGTTATCCTGAAAATGTACAGGGAATGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCCAGGTCTACGAGGAAGGCCTGGAGCGTGTGCCTTCATCTACAATTTTTAGCTTGTATGTGAAGTTTTTGATGAGCATTATTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACCGAGAACATTACTTCACGACTCTTGATGGTGTATGAAAAGGCTCTAACTTTAGGACACATTACAGATGATTTAGCATGCCAATATGTTTTGTTTTATCTGGAACTTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAGACTTTGCAGTGGAAAATATTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCTGAAGTCCATCTTTGAACTGACAAAAGAGGTTCTGAGAGATGTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTCCTCAAGTTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCTCTTTTAGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCGTACAAGAGAAGTGTATAAGAAATTTCTTGGATTACCCCATCCTGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATATGAATCTGCACTTACAACTTATGGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTAAGATAGGATCATCAGAAACAGCAGCTGCAATTCGTTGGCGTGCGAGGAAAACATTAAAAGACGCTACAGCCCTTATTACTAGCTCTGATTTGTGA

Protein sequence

MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
Homology
[Close]
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match: Q8VCY6 (U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=Utp6 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 8.5e-45
Identity = 160/658 (24.32%), Postives = 290/658 (44.07%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI+L  L + R+  +    KK           +++ V R+  ++  A  K+K D+ LW  
Sbjct: 61  EINLLELIQRRRARIKYSFKKDE--------IEYSMVHRVQGVFGRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ FC+       + K+ + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGE 240
           P    L+ EY RMEL +  KL+  K                       +E +   M MG+
Sbjct: 181 PECPKLYQEYFRMELMHAEKLRKEK-----------------------QEFEKAAMDMGD 240

Query: 241 ARKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA 300
              D+   +++ E              +   IY  +I  +  +      +L I +  D A
Sbjct: 241 F--DHPEEILKGE--------------LARIIYKNSISKIKGA-EFHVSLLAIAQLFDFA 300

Query: 301 HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ------ 360
             +++  +I  D++      P  WD++AR +   E+  G  + + +S+  KAV+      
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPG--EEQPVSKQAKAVEMGRREE 360

Query: 361 ----VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKAL 420
               VYEE ++ +P+  ++  Y+ F +   +    ++TS +    + +  R ++ + KA 
Sbjct: 361 RCCAVYEEAVKALPTEAMWKCYITFCLERFS----KKTSSVPLRGQRL-ERTMLAFRKAH 420

Query: 421 TLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDS 480
            L  +++    Q++   L      EA ++AE   +  + +SV +W  ++      +L DS
Sbjct: 421 ELKLLSEVQYKQWIDLLLRQDLFKEALQVAE-AGTELFKDSVTMWQTKLQ-----VLIDS 480

Query: 481 PSPSKDDLKSIFELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSG 540
            SP   D++  FE   E    +       LW++  ++  +     D         +A +G
Sbjct: 481 KSP---DVEMRFE---EAFAHLKPQVCLPLWISWAEWSESAKSQEDTEAIFKKAIIAVTG 540

Query: 541 GNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKD 600
            +    +L    +D+  +  G ++ R V+K         +  ++  +Q E       +  
Sbjct: 541 AS--SVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKE----QEPC 583

Query: 601 GLANARKLYESALTTYG-QDVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA 645
            + N R+ YE AL  +G  D  LW +Y   E     G  E    I WRA K L+  +A
Sbjct: 601 KMVNLREYYERALREFGTSDSDLWMDYIKEELNHPFGKPENCGQIYWRAMKMLQGQSA 583

[Close]
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match: Q9NYH9 (U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 2.1e-43
Identity = 165/660 (25.00%), Postives = 287/660 (43.48%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ Y
Sbjct: 1   MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI+L  L + R+  +    KK    ++  SI     V R+  +++ A  K+K D+ LW  
Sbjct: 61  EINLLELIQRRRTRIGYSFKKD---EIENSI-----VHRVQGVFQRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ FC+      R+ KV + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGE 240
           P    L+ EY RMEL +  KL+                    +EK+  E+      SM  
Sbjct: 181 PECPKLYKEYFRMELMHAEKLR--------------------KEKEEFEK-----ASMDV 240

Query: 241 ARKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA 300
              D    +++ E              +   IY  ++  +  +      +L I +  D A
Sbjct: 241 ENPDYSEEILKGE--------------LAWIIYKNSVSIIKGA-EFHVSLLSIAQLFDFA 300

Query: 301 HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ------ 360
             +++  +I  D++      P  WD++AR +     ++  ++ +  ++  KAV+      
Sbjct: 301 --KDLQKEIYDDLQALHTDDPLTWDYVARREL---EIESQTEEQPTTKQAKAVEVGRKEE 360

Query: 361 ----VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKAL 420
               VYEE ++ +P+  ++  Y+ F +        +  SG          R + V+ KA 
Sbjct: 361 RCCAVYEEAVKTLPTEAMWKCYITFCLERFTK---KSNSGFLRGKR--LERTMTVFRKAH 420

Query: 421 TLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGK--YSNSVKLWVLRVSTEIKCILK 480
            L  +++   CQY    + L   +  R+  E   +G   + +S  +W L++      +L 
Sbjct: 421 ELKLLSE---CQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQ-----VLI 480

Query: 481 DSPSPSKDDLKSIFELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAK 540
           +S SP   D+  +FE   E    +       LW++  ++        D         LA 
Sbjct: 481 ESKSP---DIAMLFE---EAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAV 540

Query: 541 SGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGD 600
            G   D  +L +  +D+  +  G ++ R V+K         +  ++  IQ E    S   
Sbjct: 541 IGA--DSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESC-- 582

Query: 601 KDGLANARKLYESALTTYGQ-DVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA 645
              +AN R+ YE AL  +G  D  LW +Y   E    +G  E    I WRA K L+  +A
Sbjct: 601 --NMANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENCGQIYWRAMKMLQGESA 582

[Close]
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match: O60188 (U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp6 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.0e-31
Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MA+ VQ+ +E  V EL+DL ++ +F+R EI  I+K RR FE +L R      D+L+YI Y
Sbjct: 1   MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI+LE+LR  R K +        N   + +ISD+AG +++L+++  A  K+ GD+ LW  
Sbjct: 61  EINLETLRAKRHKRL--------NITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLD 120

Query: 121 YLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVC 180
           Y+ + +  K    + K+    ++ HP    +W+ A   EF  N+NV AAR+LM   LR+ 
Sbjct: 121 YIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRALRLN 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENI 220
             +  +W  Y R+EL+Y+ KL AR   L  G  S   ENI
Sbjct: 181 QENPVIWAAYFRLELSYMTKLFARSQIL-TGNISSKTENI 211

[Close]
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match: Q54WN5 (U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum OX=44689 GN=utp6 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.6e-30
Identity = 161/679 (23.71%), Postives = 284/679 (41.83%), Query Frame = 0 

Query: 3   DVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEI 62
           D V F ++ +++E   L   G+ S++E  +I+K+R   E ++      K D+L YI YE+
Sbjct: 2   DRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYEL 61

Query: 63  HLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFRYL 122
            L+ L   R KA   E   +    +R +I           ++  A  K+  D  LW   L
Sbjct: 62  ELDRLFHKRGKAKNIEFDYRLRSALRHAI----------ILFGSATKKFPKDEALWINAL 121

Query: 123 --EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 182
                RA K G  +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   
Sbjct: 122 NIRMKRASKEGTGRLFSIALSNL-PRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNK 181

Query: 183 TSEDLWVEYLRMELTYLNKLKAR----KVALGEGEGSLVRENIAAEEKQWREENKDLFMS 242
           T + LW  +  MELTY++ L +        + E E   ++ N+ +  K  + E KD F++
Sbjct: 182 TDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKLNLDSLRKSEKIE-KDEFIT 241

Query: 243 MGEARKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E 302
            G+        ++  +   +  L R Q   I + ++  AI+ ++   F  RK   +I  +
Sbjct: 242 FGK-------EILSADKLKQSSLIRGQ---IAQIVFRKAIKSSIGQDFDFRKHFYKIASK 301

Query: 303 AMDLAHSEE--------MHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEIS 362
            +D+    E        +  +IL+ +  DF    + + +LA ++         S+   + 
Sbjct: 302 FLDIGKDSENPMGAGELLQKEILESLVTDFPNDDKTYIFLASIE-----QSKSSEPSLLK 361

Query: 363 RIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYE 422
           R+  + ++  +GL  + S +    Y+ F+  II  +K ++   +    ENIT  LL  Y+
Sbjct: 362 RLNNSTKILNQGLTIIKSESYLFNYIHFIRQIIVDIKLKENKLI----ENITDILLKAYK 421

Query: 423 KALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIK--- 482
            ++    + +     Y+   LELG+ ++A K++E      + NS +LW  R++  IK   
Sbjct: 422 YSIDNNILKESGYQYYIELLLELGKTNDAIKVSEESVK-LFKNSNQLWNQRINLLIKNEM 481

Query: 483 -CILKDSPSPSKD--DLKSIFEL--------TKEVLRDVSVSESGSLWLTVLKFFANQSY 542
              L D+ S + +  ++   FE+        T       S S S +L++   K+     +
Sbjct: 482 VVKLFDNLSNNNEYNNIDKCFEMAVKNCTSSTTSTTSSTSTSSSSNLFIEYFKY--QVVF 541

Query: 543 YFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMY 602
            FDK                          D+    D  ++  +   +F          Y
Sbjct: 542 KFDK--------------------------DYKKIVDLFEKLLKQLDEF----------Y 601

Query: 603 QTCIQLESNLASAGDKDGLANARKLYESALT---TYGQDVSLWQEYYTMESK-IGSSETA 648
           Q CI  E         D     R LYE  L+      +DV +W  Y   E K  G  E A
Sbjct: 602 QKCILYEEERIEKNIND----IRSLYEKCLSIKEISSKDVDVWLNYRNFELKSAGDIERA 606

[Close]
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match: Q02354 (U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-27
Identity = 79/255 (30.98%), Postives = 136/255 (53.33%), Query Frame = 0 

Query: 6   QFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLE 65
           ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE ++ 
Sbjct: 5   RYYLEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLNSRGSSINDYIKYINYESNVN 64

Query: 66  SLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFRYLEFC 125
            LR  R K + +        K   S+SD++  +RI +IY+    K+  D+  W  YL + 
Sbjct: 65  KLRAKRCKRILQ-------VKKTNSLSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYM 124

Query: 126 RARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPT 185
           +AR N     ++  +  QL++ HP    +WI  A +E++ ++N  + R++  +GLR  P 
Sbjct: 125 KARGNQTSYKKIHNIYNQLLKLHPTNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPD 184

Query: 186 SEDLWVEYLRMELTYLNKLKARKVALG---EGEGSLVRENIAAEEKQWREENKDLFM-SM 245
              LW EY++ EL ++ KL  R+  +G   E E  L  +N     +   EE   L + S 
Sbjct: 185 VPKLWYEYVKFELNFITKLINRRKVMGLINEREQELDMQNEQKNNQAPDEEKSHLQVPST 244

Query: 246 GEARKDNDGSVVETE 253
           G++ KD    + E +
Sbjct: 245 GDSMKDKLNELPEAD 252

[Close]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match: A0A0A0KJV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1)

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 597/651 (91.71%), Postives = 621/651 (95.39%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI LESLRRLRKKAVARELKKQG+KKM+KSISDFAGVKRILYIYRLAVT+YKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S VET SK+KLDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDFA+QP++WDWLARL C PENVQG SDIKEISRIEKAV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            VPSS IFSLYV+FL SII PVKGEQT GLSSHT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA+KLAERLCSGK+SNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+  SVSESGSLWL VLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           AL TYGQ+V LWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match: A0A5D3CNA4 (U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006370 PE=3 SV=1)

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 594/651 (91.24%), Postives = 621/651 (95.39%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRILYIYRLAV++YKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+  SVSESGSLWL VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match: A0A1S3B0R2 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=LOC103484621 PE=3 SV=1)

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 594/651 (91.24%), Postives = 621/651 (95.39%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRILYIYRLAV++YKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+  SVSESGSLWL VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match: A0A6J1CMJ8 (U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=3673 GN=LOC111012347 PE=3 SV=1)

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 588/651 (90.32%), Postives = 623/651 (95.70%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           E HL+SLR LRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVT+YKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGE +GSLVREN AAEEKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R++NDGSVVETESK++LDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEMHSKILQD+KRDF TQP++WDWLARL+C PENVQGMSD KEIS+IEKAVQVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            +PSST+FSLYV+FLM+II PVKG+ TSGLSS+T NITSRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTK+VLRD SVSES SLWL VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLASAGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTY QDVSLWQEY  ME+KIGSSETAAAIRWRARKTLKDATAL+TSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match: A0A6J1KQP1 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496770 PE=3 SV=1)

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 582/651 (89.40%), Postives = 622/651 (95.55%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           E HL+SLRRLRKKAV+RELKKQGNKKMRKS+SDFA VKRILYIYRLAV++YKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH++NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGE EGSLVREN AAE+KQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R+DNDGSV ETESKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEE+HSKILQDIKRDF T+P++WDWLARL+  P++VQGMSD K+ SRIEKAVQVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            VPSS +FSLYV+FLM++I  VKGEQ+SGLSS T N TSRLLMVYEKALT GHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FY +LG+LDEARKLA+RLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDLKSI
Sbjct: 421 QYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVLRD SVSESGSLWLTVLKFFANQS+YFD+LVEISL ALAKSGG+EDGFSLSSA
Sbjct: 481 FELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDF+LQKDGIQRTREVYKKFL LPHPGLA+Y+TCIQLESNLASAGDK+GLA+ARKL+ES
Sbjct: 541 IVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           AL TYGQDVSLWQEYY MESK+GSSETAAAIRWRARKTLKDATAL TSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. NCBI nr
Match: XP_038883020.1 (U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida])

HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 616/652 (94.48%), Postives = 634/652 (97.24%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLE MVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY
Sbjct: 1   MADVVQFRLESMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EIHLESLR LRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVT+YKGDIDLWFR
Sbjct: 61  EIHLESLRHLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGE EGSLVREN+AAEEKQWREE+KDLFM MGEA
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENMAAEEKQWREEHKDLFMPMGEA 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R+DNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDF T+P++WDWLARLQ  PEN+QGMS IKEISRIEKAVQVYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFGTEPQYWDWLARLQYNPENLQGMSAIKEISRIEKAVQVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            VPSSTIFSLYVKFLM +I PVKGE+TSGLS+HTENITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSTIFSLYVKFLMGLITPVKGEETSGLSTHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEARKLAERLCSG++SNSVKLWVLRVSTEIKCI KDSPSPSKDDLK I
Sbjct: 421 QYVLFYLELGRLDEARKLAERLCSGEFSNSVKLWVLRVSTEIKCISKDSPSPSKDDLKYI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL++ SVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA
Sbjct: 481 FELTKEVLKNFSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLAS GDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASIGDKDGLANARKLFES 600

Query: 601 ALTTYG-QDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTYG  DVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATAL+TSSDL
Sbjct: 601 ALTTYGHDDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALVTSSDL 652

[Close]
BLAST of Lsi01G004390 vs. NCBI nr
Match: XP_004134769.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099.1 hypothetical protein Csa_003801 [Cucumis sativus])

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 597/651 (91.71%), Postives = 621/651 (95.39%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI LESLRRLRKKAVARELKKQG+KKM+KSISDFAGVKRILYIYRLAVT+YKGDIDLWFR
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R DND S VET SK+KLDLFRE+GSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDFA+QP++WDWLARL C PENVQG SDIKEISRIEKAV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            VPSS IFSLYV+FL SII PVKGEQT GLSSHT+NITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPVKGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA+KLAERLCSGK+SNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSI
Sbjct: 421 QYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+  SVSESGSLWL VLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           AL TYGQ+V LWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. NCBI nr
Match: XP_008440018.1 (PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >TYK13035.1 U3 small nucleolar RNA-associated protein 6-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 594/651 (91.24%), Postives = 621/651 (95.39%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           EI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRILYIYRLAV++YKGDIDLWFR
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLW+EYLRMELTYLNKLKARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R D+DGS VET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSI
Sbjct: 421 QYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKEVL+  SVSESGSLWL VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS 
Sbjct: 481 FELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSV 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Sbjct: 601 ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. NCBI nr
Match: XP_022142158.1 (U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia])

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 588/651 (90.32%), Postives = 623/651 (95.70%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           E HL+SLR LRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVT+YKGDIDLWFR
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGE +GSLVREN AAEEKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R++NDGSVVETESK++LDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEEMHSKILQD+KRDF TQP++WDWLARL+C PENVQGMSD KEIS+IEKAVQVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            +PSST+FSLYV+FLM+II PVKG+ TSGLSS+T NITSRLL+VYEKALTLGHIT+DL C
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPVKGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLGC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSI
Sbjct: 421 QYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTK+VLRD SVSES SLWL VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS 
Sbjct: 481 FELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSST 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLASAGDKDGLANARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           ALTTY QDVSLWQEY  ME+KIGSSETAAAIRWRARKTLKDATAL+TSSDL
Sbjct: 601 ALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]
BLAST of Lsi01G004390 vs. NCBI nr
Match: XP_023517938.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 588/651 (90.32%), Postives = 623/651 (95.70%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           E HL+SLRRLRKKAV+RELKKQGNKKMRKS SDFA VKRILYIYRLAV++YKGDIDLWFR
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSASDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH++NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEA 240
           TSEDLWVEYLRMELTYLNKLKARKVALGE EGSLVREN AAE+KQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 RKDNDGSVVETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300
           R+DNDGSV ETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLE 360
           SEE+HSKILQDIKRDF T+P++WDWLARLQ  P++VQGMSD KE SRIEKAVQVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 RVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLAC 420
            VPSS +FSLYV+FLM++I  VKGEQ+SGLSS T N TSRLLMVYEKALTLGHITDDLAC
Sbjct: 361 HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLAC 420

Query: 421 QYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSI 480
           QYV FYL+LG+LDEA KLAERLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDL SI
Sbjct: 421 QYVSFYLQLGKLDEACKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLTSI 480

Query: 481 FELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSA 540
           FELTKE+LRD SVSESGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGG+EDGFSLSSA
Sbjct: 481 FELTKEILRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSSA 540

Query: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES 600
           IVDFVLQKDGIQRTREVYKKFLGLPHPGLA+Y+TCIQLESNLASAGDK+GLA+ARKL+ES
Sbjct: 541 IVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES 600

Query: 601 ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL 652
           AL TYGQDVSLWQEYY MESK+GSSETAAAIRWRARKTLKDATAL TSSDL
Sbjct: 601 ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Lsi01G004390 vs. TAIR 10
Match: AT4G28200.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). )

HSP 1 Score: 745.3 bits (1923), Expect = 4.0e-215
Identity = 380/655 (58.02%), Postives = 500/655 (76.34%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDY 60
           MADVVQ+RLE MVDELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++AYIDY
Sbjct: 1   MADVVQYRLERMVDELDDLERREIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60

Query: 61  EIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTKYKGDIDLWFR 120
           E+ L+ LR+LR+K+VAR  K    K+ +KS+SDFAGV RI+ IYRLA  +YKGDI+LWFR
Sbjct: 61  EVKLDELRQLRRKSVARVTK----KRKKKSVSDFAGVARIVEIYRLATMRYKGDINLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCP 180
           YLEFC+ +++GRMKK LAQ IRFHPKV GVWIYAA+WEFD N NV AAR+LML+GLRVC 
Sbjct: 121 YLEFCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCS 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSM--- 240
            SEDLWVEYLRMELT+LNKLKARKVALGE +GSLVR+    E++QW++ENK+LFMS+   
Sbjct: 181 NSEDLWVEYLRMELTFLNKLKARKVALGEDKGSLVRDTKTVEDEQWKDENKELFMSLDEK 240

Query: 241 -GEARKDND-GSVVE--TESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEIL 300
            G  +++ND  S+VE   +   K+D  +E+GSN+L+TIY+GA+EA+PSSF LRKR LEIL
Sbjct: 241 EGNEKEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQTIYSGAVEAIPSSFDLRKRFLEIL 300

Query: 301 EAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLAR--LQCYPENVQGMSDIKEISRIEKA 360
           EA DLAHS+EM + IL D+KRDF  +PE+W+WLAR  +     N  G+       +++KA
Sbjct: 301 EATDLAHSDEMRNTILSDLKRDFCNEPEYWNWLARHEMSGCISNEAGLEFAN--PQMQKA 360

Query: 361 VQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTL 420
           +QV+EEGL+ V SS++F +Y+ FLM  I    G++   +SS +  I S ++ VY+KA   
Sbjct: 361 IQVFEEGLQTVTSSSMFEIYINFLMEAIVQSNGDENE-ISSLSNPIISHIINVYQKADET 420

Query: 421 GHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPS 480
           G +T++LA +YV  YL+L +  EA+KLAE+LCS K++ S KLW+ RVS EI+  L ++ S
Sbjct: 421 GCLTEELADEYVSLYLKLEKTHEAQKLAEKLCSEKFAGSAKLWLSRVSIEIRS-LSENSS 480

Query: 481 PSKDDLKSIFELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGN 540
           PSK D +++FEL    LR V +SES SLWL    FFA+Q  Y DKLVE+S+L+  KS G+
Sbjct: 481 PSKADFQTVFELLSNALRKVPISESESLWLMAFNFFAHQRTYLDKLVEMSILSATKSHGS 540

Query: 541 EDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGL 600
           +  FSL+S +V FVL+  G    R++YK+FL LP P L +Y+ CI++E+NL S GDKDGL
Sbjct: 541 DHVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGL 600

Query: 601 ANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALI 647
           +NARKLY+SA+ +YGQDV LW+ YY++E+K+G+SETA  + WRARKTL ++   I
Sbjct: 601 SNARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNESADFI 647

[Close]
BLAST of Lsi01G004390 vs. TAIR 10
Match: AT4G03430.1 (pre-mRNA splicing factor-related )

HSP 1 Score: 46.6 bits (109), Expect = 8.9e-05
Identity = 112/534 (20.97%), Postives = 200/534 (37.45%), Query Frame = 0 

Query: 132 RMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLR 191
           R + +   L + +PK P  WI AA  E + +  + AAR  +  G   CP +ED+W+E  R
Sbjct: 371 RARLLYKSLTQSNPKNPNGWIAAARVE-EVDGKIKAARFQIQRGCEECPKNEDVWLEACR 430

Query: 192 MELTYLNKLKARKVALGEGEGSL---VRENIAAEEKQWREENKDLFMSMGEARKDNDGSV 251
                L   +  K  + +G   +   V+  + A + +   ENK   +  G     +   +
Sbjct: 431 -----LANPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLEHIPDSVRL 490

Query: 252 VETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKI 311
                K  ++L  E+ + IL    + A+E  P         LE+  A+    +     K+
Sbjct: 491 ----WKAVVELANEEDARIL---LHRAVECCPLH-------LELWVALARLETYAESKKV 550

Query: 312 LQDIKRDFATQPEFWDWLARLQCYPENVQGMSD------------IKEISR----IEKAV 371
           L   +     +P  W   A+L+     +   +D            IK + R    I++  
Sbjct: 551 LNKAREKLPKEPAIWITAAKLEEANGKLDEANDNTAMVGKIIDRGIKTLQREGVVIDREN 610

Query: 372 QVYE-EGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTE----NITSRLLMVYEK 431
            + E E  ERV S       +K  + I    +  + + ++   E            +Y  
Sbjct: 611 WMSEAEACERVGSVATCQAIIKNTIGIGVEEEDRKRTWVADADECKKRGSIETARAIYAH 670

Query: 432 ALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILK 491
           AL++      +  +        G  +    L  +  +      V LW++    + K +  
Sbjct: 671 ALSVFLTKKSIWLKAAQLEKSHGSRESLDALLRKAVTYVPQAEV-LWLM--GAKEKWLAG 730

Query: 492 DSPSPSKDDLKSIFELTKEVLRD--VSVSESGSLWLTVLKF-FANQSYYFDKLVEISLLA 551
           D P+             + +L++   ++  S  +WL   K  F N+     ++    LLA
Sbjct: 731 DVPA------------ARAILQEAYAAIPNSEEIWLAAFKLEFENKEPERARM----LLA 790

Query: 552 LAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLAS 611
            A+  G  +   + SAIV+  L    ++  R        L + GL  + T  +L   L  
Sbjct: 791 KARERGGTERVWMKSAIVEREL--GNVEEERR-------LLNEGLKQFPTFFKLWLMLGQ 850

Query: 612 AGDK-DGLANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARK 638
             ++   L  ARK Y++ L      + LW     +E K+     A AI   ARK
Sbjct: 851 LEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTARK 856

The following BLAST results are available for this feature:
BLAST of Lsi01G004390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VCY68.5e-4524.32U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=... [more]
Q9NYH92.1e-4325.00U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=U... [more]
O601887.0e-3137.73U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain... [more]
Q54WN54.6e-3023.71U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum ... [more]
Q023541.2e-2730.98U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ... [more]
BLAST of Lsi01G004390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJV90.0e+0091.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1[more]
A0A5D3CNA40.0e+0091.24U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. ma... [more]
A0A1S3B0R20.0e+0091.24U3 small nucleolar RNA-associated protein 6 homolog OS=Cucumis melo OX=3656 GN=L... [more]
A0A6J1CMJ80.0e+0090.32U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=36... [more]
A0A6J1KQP10.0e+0089.40U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 ... [more]
BLAST of Lsi01G004390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883020.10.0e+0094.48U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida][more]
XP_004134769.10.0e+0091.71U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus] >KGN49099.... [more]
XP_008440018.10.0e+0091.24PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo] >T... [more]
XP_022142158.10.0e+0090.32U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia][more]
XP_023517938.10.0e+0090.32U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo][more]
BLAST of Lsi01G004390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28200.14.0e-21558.02FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED I... [more]
AT4G03430.18.9e-0520.97pre-mRNA splicing factor-related [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 128..160
e-value: 13.0
score: 14.6
coord: 163..195
e-value: 0.0045
score: 26.2
coord: 589..621
e-value: 5.2E-4
score: 29.3
coord: 549..581
e-value: 33.0
score: 11.7
coord: 95..127
e-value: 140.0
score: 7.0
coord: 346..377
e-value: 0.46
score: 19.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 530..649
e-value: 4.7E-7
score: 31.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..207
e-value: 1.6E-14
score: 55.7
coord: 247..506
e-value: 2.2E-9
score: 38.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 115..204
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 542..641
IPR013949U3 small nucleolar RNA-associated protein 6PFAMPF08640U3_assoc_6coord: 9..93
e-value: 2.8E-26
score: 91.3
NoneNo IPR availablePANTHERPTHR23271:SF1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOGcoord: 1..639
NoneNo IPR availablePANTHERPTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66coord: 1..639

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G004390.1Lsi01G004390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006396 RNA processing
cellular_component GO:0034388 Pwp2p-containing subcomplex of 90S preribosome
cellular_component GO:0032040 small-subunit processome
molecular_function GO:0005515 protein binding
molecular_function GO:0030515 snoRNA binding