Lsi01G004350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G004350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRhamnogalacturonan endolyase
Locationchr01: 3660429 .. 3664557 (-)
RNA-Seq ExpressionLsi01G004350
SyntenyLsi01G004350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCATATTTTGTTGGGTGACTACTGATTCTTTGTACTACCGAACCCCATATGTCGACAAGACAGATGACCAAGAAAATACTCAGTTTTAATAACGCATAGTTCTTCGAAGAGTTTTTTCCGAGGCTTAATCTGTTAGTTGTAGTTCATAAACTAATGGTGATGCAAACAAGAAATGACGTACCCAAATCTTCTGATGCTCTTAGTAACCAACGGCCAGCTATAATCCTTCACGTCATTTGCATAAACTAATCATAACCTCCAATTATATACTAAAGAAGATCAGAAAGATGGTTAGAAAACTGAGCTTCTACAATGGGGAAGAAGAAGCTGAGCCTGCAAAATCAAGGCTCCCACGTTAGTTTGGAGCCCTTTGACTCTTATTTCCTTGTGATCATGTTCTCTGTAATCCATGTGTGTTATAATTCTTTGCAGGTTATATTGGACAATGGATTGTTGAAGGTGACGATATCAAACCCCCAAGGGTATGTAAGTGGCATCACGTATGGAGGCATGGACAATCTGTTAGATGTAAAATCAAGCGAGTCTAAAAGAGGGTAACTTTCAGACACTATGAGGATTTTGAGGCTGTTTTGCTTTTGGGAACCTGTCTTTATTGCTCACATCACATGTAATGCCAACGACGAAATAGTGTAGATCGAACAGGATTTCATATAACTGCTTTTGACTTGTGCAGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGTATGATGCCTTTTCATTAGATTGGTAGATTAAGTTTAGCAGTCCTCAAATCATAGGAAAATAGGTCTATGAACCAAATAAAGTTTGTCTATGCAAGCCCTCCTTAGAAGTTGTCGATCAAAAGGATAAGTTTCAAATACATCATGTTCTCAAGCCTGAGGATGACTCTAGATATCCTCTAACTCTTGAATCCATTAAAAATTGCAGGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAGATATCATTCAGGAAAGTTTTCGACCCGTCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTTGTACTTTCATTCGGACCTCCCTTTTACCTTGAAACATCTTCTTTAAATTCTGCTGAAAATTTCACAGGCTTCTGATTTGTCCTCTAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCATCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTTAAACTGCGACAAGAGAAGTAAATAATATTCTTCTTCTTCCCCAGCCCCTGCATGGCTAGCTAGAGTACAATTTGCTGTTTTCTCCTTTTTCCTTTTCCTTCTTGTACTGTCTACCTCACCAATTTAGGGTCAAATTAGGTTTCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCGTCCAGGCAGAGGTGAACAACTAATTGTACCTGAGTCAGTTCTGCTTGTGGATCCCATTAATCCTGATTTGAAAGGAGAGGTGAGAATGTAAGCCTTAATTATTTGCTTTACCTACACATGACACATGATTTCCACGAACGTAAGGACTAAATGCAGGTAGATGATAAGTACCAATACTCGATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATCGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTAACAGTCCATACTGGTCCTACATGTCTTGCTGTAATTCTTTTTTCCTCTGCTCCTACTCGATTTAAATCCCGAATTATATGTCTATAACATCTGATATAAAAGAAATCTGTGATGCAACAGATGTTTCATGGAACCCATTACATTGGAGAAAATATACTCACACATATTAAGGAGGGAGAGACATGGAGAAAGGTCTTTGGTCCTGTTCTTGTTTACCTTAACTCCACCTCAGATGTATCAGAGGCACACAACTTATGGATAGATGCAAAAGAACAGGTATTTGTTTGAAATCCAACTTTCTCCCAACCCGTACCTGCACTCCTCAACATGTTGCAGTAAATTGAACCATTGTCTCATAACATAGAATTCAAGAACACCATTAGCTACCGAACCATACATTCTCTTCAAATTCTGTACTTTCTTCCCGAAACCTGAAAATTATATGATTTTTTAAGATAACGATATCAAGATATGATTTTGCTTCGTATTGTGTTTCTACTAGTATGCGCCAGAGAGGCTTAGTGGCAGATATGCGGGCTTAATATTTCACTTGATTCATGATATAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTCATGGCAAATGAACGTGGTGCCATTTCAGGAAGACTATTAGTCCAAGACAGGTAAAATTGGTCCCCATTTCTAAGGAACTGTAATTTTCCTTTCAGTGTCTTGTAAAATAAGGCAGTTTCTCTCTCTTTCACTCTCTAGGTTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCACATATTGGATTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAGACAGAAAGCAAGGTGAAAGCTCTTTCTTAGCTCTCCTGGGACATAACCTTTCTTACACTTGTTACTCTGATAAACTTCAATGCACTGAATTCAGTAACTGTGACTTCATAACTTCTTAAAACAAAGGATATTTGTGCGAGTCCAGGAATATCAATTTTGGGTACAAACAGATTCAAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGATTCATTGGTGATTATCTTCACAAATCACTAATAACAGTAGATGCAGGTTCTTTTCCTCTTCTTCAATGAGGTTTTCTGTTTCTAATGAAGACAAATGCTACTTCTTCAACTAGTTCTGATAGTTGATATTTATCAGGATCTCATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTATCCTGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTCGATCCGATGTATGTCAACAAGCTATTCCTTCACAGCCCAGAAAAGTAAGTAACAAAAACCTTCTTTTACGTAACAAACATCCGCAAAATAAACGTCAAAATTCACTTGGTTACTTGGCAAATTATAGGCAGTATATCCTCTGCCCTAACTATGCACCAAATCCAGGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAGTGACCAAGTTTTCACTGTGGGTATCAATGATCCGAAAAAAGATTGGTTCTTTGCTCAAGTTTGCAGGTTTGTAGTTTCAAGTCCAACCCATCACATTTATTGACAAAATGAACGTTAATATTCACTTGACGGTGAGTGCTACTATTCTGTAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCGATGGAACTTACCGGCTTAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGGTACAAACAAACAGGAAAATGTTGGAGAAAATTGGATTTAGTAAGCTTGATTGTCCACTCAAAAGGCTCGCTCTTGTTTTCTAGTAAACTATTTTATTGTGTCTGCAGATTAATGTCAACTCAATAGAGTCGGAGCCCTCTCTGGTCTTCCAGCTGATGAATCTGGGAATGGATAACACAGTTTGTCGACATGGAATTCATGGACTCCATCGAATTTATAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACGCAGGAAAGGAATGGAGATCCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCTGATACTCCATGAAGTTGAAGATCTAATTCAATGCTATTTTATCCGAATCCAAAGGCACAAGCTAGAGCAAAATCCTGAGCATTTGTGATTGATATTGGTTACGGTGTGGGCCAAATGTATTGTTAAAGAATCCCAAGTTCTTGAAAAAGGGATACTCAAAACATTCCACTAATCAAAGCCGAATTTCATAACAAA

mRNA sequence

ATGGATGTTATATTGGACAATGGATTGTTGAAGGTGACGATATCAAACCCCCAAGGGTATGTAAGTGGCATCACGTATGGAGGCATGGACAATCTGTTAGATGTAAAATCAAGCGAGTCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAGATATCATTCAGGAAAGTTTTCGACCCGTCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCATCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTTAAACTGCGACAAGAGAAGTTTCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCGTCCAGGCAGAGGTGAACAACTAATTGTACCTGAGTCAGTTCTGCTTGTGGATCCCATTAATCCTGATTTGAAAGGAGAGGTAGATGATAAGTACCAATACTCGATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATCGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTAACAGTCCATACTGGTCCTACATGTCTTGCTATGTTTCATGGAACCCATTACATTGGAGAAAATATACTCACACATATTAAGGAGGGAGAGACATGGAGAAAGGTCTTTGGTCCTGTTCTTGTTTACCTTAACTCCACCTCAGATGTATCAGAGGCACACAACTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTCATGGCAAATGAACGTGGTGCCATTTCAGGAAGACTATTAGTCCAAGACAGGTTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCACATATTGGATTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAGACAGAAAGCAAGGAATATCAATTTTGGGTACAAACAGATTCAAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGATTCATTGGTGATTATCTTCACAAATCACTAATAACAGTAGATGCAGGATCTCATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTATCCTGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTCGATCCGATGTATGTCAACAAGCTATTCCTTCACAGCCCAGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAGTGACCAAGTTTTCACTGTGGGTATCAATGATCCGAAAAAAGATTGGTTCTTTGCTCAAGTTTGCAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCGATGGAACTTACCGGCTTAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGGTACAAACAAACAGGAAAATGTTGGAGAAAATTGGATTTAGTAAGCTTGATTGTCCACTCAAAAGGCTCGCTCTTATTAATGTCAACTCAATAGAGTCGGAGCCCTCTCTGGTCTTCCAGCTGATGAATCTGGGAATGGATAACACAGTTTGTCGACATGGAATTCATGGACTCCATCGAATTTATAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACGCAGGAAAGGAATGGAGATCCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCTGATACTCCATGAAGTTGAAGATCTAATTCAATGCTATTTTATCCGAATCCAAAGGCACAAGCTAGAGCAAAATCCTGAGCATTTGTGATTGATATTGGTTACGGTGTGGGCCAAATGTATTGTTAAAGAATCCCAAGTTCTTGAAAAAGGGATACTCAAAACATTCCACTAATCAAAGCCGAATTTCATAACAAA

Coding sequence (CDS)

ATGGATGTTATATTGGACAATGGATTGTTGAAGGTGACGATATCAAACCCCCAAGGGTATGTAAGTGGCATCACGTATGGAGGCATGGACAATCTGTTAGATGTAAAATCAAGCGAGTCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGAGGCAAGGACAGATACCAATTGCTTAAGGGATCTGAATTCAATGTCATCAACACAAGTGATGACACGATCGAGATATCATTCAGGAAAGTTTTCGACCCGTCAACTCGAGGCAACAAACTTCCACTTGGTGTGGACATAAGGTACATAATGAGGACTGGTATTCCAGGCTTCTATTGCTATGCAATCTACGAGCACCCATCAGAATGTCGGGCTTTCGATCTTGCTCAGACAAGAATGGTGTTTAAACTGCGACAAGAGAAGTTTCACTACATGGCAATTTCAGATGAGAAGCAAAGAATAATGCCAATGCCAGAGGATTTGCGTCCAGGCAGAGGTGAACAACTAATTGTACCTGAGTCAGTTCTGCTTGTGGATCCCATTAATCCTGATTTGAAAGGAGAGGTAGATGATAAGTACCAATACTCGATGGATAACAAAGATGGAGGAGTTCATGGATGGATAAGTTCCAGCCCAAACAACATAGGTTTTTGGATCGTTTTTCCAAGCCATGAGTTCCGAAATGGAGGTCCTACAAAGCAAAATCTAACAGTCCATACTGGTCCTACATGTCTTGCTATGTTTCATGGAACCCATTACATTGGAGAAAATATACTCACACATATTAAGGAGGGAGAGACATGGAGAAAGGTCTTTGGTCCTGTTCTTGTTTACCTTAACTCCACCTCAGATGTATCAGAGGCACACAACTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCGTACAATTTTGTCTCTTCATCTTTTTATTTCATGGCAAATGAACGTGGTGCCATTTCAGGAAGACTATTAGTCCAAGACAGGTTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCACATATTGGATTATCCGCTGCTAGAAAAGAAGGTGCCTGGCAGACAGAAAGCAAGGAATATCAATTTTGGGTACAAACAGATTCAAATGGAGATTTCACTATCAGAAACATTATTCCTGGAGTCTATGGACTTCATGGTTGGGTACCTGGATTCATTGGTGATTATCTTCACAAATCACTAATAACAGTAGATGCAGGATCTCATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTTTATGGGAGATTGGTTATCCTGACCGTACAGCTAATAGCTTCTATGTTCCTGATGTCGATCCGATGTATGTCAACAAGCTATTCCTTCACAGCCCAGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAGTGACCAAGTTTTCACTGTGGGTATCAATGATCCGAAAAAAGATTGGTTCTTTGCTCAAGTTTGCAGAAGAGGGGAAGATGGTGAATATGTTGCGACAACATGGACTATTAAGTTCAACATGACATCCTTAACCGATGGAACTTACCGGCTTAGGTTGGCCATTGCATCTGCAACACGCTCGAACTTGAAGGTACAAACAAACAGGAAAATGTTGGAGAAAATTGGATTTAGTAAGCTTGATTGTCCACTCAAAAGGCTCGCTCTTATTAATGTCAACTCAATAGAGTCGGAGCCCTCTCTGGTCTTCCAGCTGATGAATCTGGGAATGGATAACACAGTTTGTCGACATGGAATTCATGGACTCCATCGAATTTATAGTATCGACATTCCATCTTCAATGCTTGTTAAGGGAGATAACTCCATATTTCTCACGCAGGAAAGGAATGGAGATCCACTCTGTGGAATTTTATACGATTATTTAAGATTGGAAGCTCCTGATACTCCATGA

Protein sequence

MDVILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRSNLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPDTP
Homology
[Close]
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match: Q5AZ85 (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglB PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 8.3e-24
Identity = 148/686 (21.57%), Postives = 260/686 (37.90%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           ++L+N  L+ T    +G +  +   G D L     S     Y D  +  P G        
Sbjct: 29  IVLENDRLRATFDKGRGSIIDLYLDGQDFLGPQSGSTGIGPYLDC-YCTPSG-----FYT 88

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIR--YIMRTGIPGFYCYAIYEHPS 122
               N +       + +  K           P G + +  + +R G  GF+ ++   + +
Sbjct: 89  AGSTNPVTELVQGTDSTGTKYAGIILNDTYTPTGQEFQQYWFLRDGETGFHMFSRLAYYN 148

Query: 123 ECRAF--DLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVD 182
           E   F  +L + R +F+   + + ++  SD +   +P  E +     EQ++V ++   ++
Sbjct: 149 ETTPFLRNLQELRTLFRPNTDLWTHLTSSDLQTAPLPSDEAI----AEQIVVQDATWRLN 208

Query: 183 PINPDLK----GEVDDKYQYSMDNKDGGVHGWI----SSSPNNIGFWIVFPSHEFRNGGP 242
               D       E   KY +S   +D  VHG      +S     G W+V  + +   GGP
Sbjct: 209 NTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTSDGTTYGAWLVMNTKDTYYGGP 268

Query: 243 TKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLN--STSDVSEAH 302
              +LTV      +  +  +++ GE    +I  G  + + FGP     N   +S + E  
Sbjct: 269 LHSDLTV---DGIIYNYIVSNHHGEG-TPNITNG--FDRTFGPQFYLFNGGGSSSLEELR 328

Query: 303 NLWIDAKEQRMLEETAWPYNFVSSSF-----YFMANERGAISGRLLVQDRFISSSPIPAR 362
           +      E R L   +W  +F  S       Y  +++RG++ G + +     S   +   
Sbjct: 329 D------EARSLASPSWNADFYDSIAKHVIGYVPSSQRGSVKGTIKLPKNAKSPIAVLTV 388

Query: 363 DAHIGLSAARKEGAWQTES---KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDY 422
           D H           +Q  S     +Q+W   D NG F+I  ++ G Y L  +  G  GD+
Sbjct: 389 DGHY----------FQDNSAVPSSHQYWADIDKNGRFSIDRVVAGKYRLTVYADGIFGDF 448

Query: 423 LHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRTANSF-YVPDVDPMYVNKLFLH 482
               ++ V A   T +   T+ P   G  +W +G PD+++  F +    DP +      H
Sbjct: 449 TRDGIV-VKARKSTSIK-ETWKPESAGTEIWRLGTPDKSSGEFRHGAARDPTHPR----H 508

Query: 483 SPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKDW------FFAQVCRRGEDGEYVATT 542
            PE    +G ++  SD     D  + +G +DP  D+       F                
Sbjct: 509 PPEYLIYWGAYDWQSDFPGGID--YMIGESDPATDFNTVHWAVFGPTPDNPVAESNTTHD 568

Query: 543 WTIKFNMT-----SLTDGTYRLRLAIASATRSNLKVQTNRKMLEKIGFSKLDCPLKRLAL 602
           W I+F+++     +    T  ++LA A A   N  V    +            P   L L
Sbjct: 569 WRIRFDLSAKQLHARKTATLTIQLAGAKAASGNTDVYNASE------------PYANLPL 628

Query: 603 INVNSIESEPSLVFQLMNLGMDNT---VCRHGIHGLHRIYSIDIPSSMLVKGDNSIFLTQ 644
            +  + + EP      M +G D +   + R  +         + P+S L +G N + L+ 
Sbjct: 629 RSYINEQEEP----LTMVIGYDQSSSCIVRSAVSCYQVREKWEFPASWLKEGSNLLRLSL 658

[Close]
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match: Q0C7K7 (Probable rhamnogalacturonate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rglB PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-23
Identity = 131/585 (22.39%), Postives = 235/585 (40.17%), Query Frame = 0 

Query: 101 YIMRTGIPGFYCYAIYEHPSECRAF--DLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPE 160
           + +R G  G + ++   + +E   F  +L + R +F+   + + ++  S+   +  P+P 
Sbjct: 123 WFLRDGETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTDLWTHLTSSE--LQTAPLPS 182

Query: 161 DLRPGRGEQLIVPESVLLVDPINPDLK----GEVDDKYQYSMDNKDGGVHGWI----SSS 220
           D     G+Q++V ++    +    D       E   KY +S   +D  VHG      +S+
Sbjct: 183 D--EAVGKQVVVQDATWRFNNTPNDAYYTQFSEYFTKYTFSNAWRDNNVHGLYADGSTSN 242

Query: 221 PNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKV 280
               G W+V  + +   GGP   +LTV  G     +    H  G   +T+      + + 
Sbjct: 243 GTTFGAWLVMNTKDTYYGGPLHSDLTV-DGIVYNYIVSNHHGEGTPNITN-----GFDRT 302

Query: 281 FGPVLVYLN--STSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSF-----YFMANERGA 340
           FGP     N   +S ++E  +      E   L + +W   F  S       Y  +++RG+
Sbjct: 303 FGPQFYLFNGGGSSSLNELRS------EAESLADPSWNVEFYDSIAKHVVGYVPSSKRGS 362

Query: 341 ISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAW----QTESKEYQFWVQTDSNGDFTI 400
           + G++ +            R A   ++    +G +      + + YQ+WV+ D+NG F +
Sbjct: 363 VQGQIKL-----------PRGATRPIAILTVDGQYFQDNSVDPRSYQYWVEMDANGKFQL 422

Query: 401 RNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRT 460
            +++ G Y L  +  G  GDY+    + V     T +   ++ P   G  +W +G PD++
Sbjct: 423 DHVVEGKYRLTVYADGIFGDYVRDG-VQVRGRKTTRIND-SWQPESAGVEVWRLGTPDKS 482

Query: 461 ANSF-YVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKD---- 520
           +  F +    DP +     LH PE    +G ++   D    +   +T+G +DP  D    
Sbjct: 483 SGEFLHGVARDPTHP----LHPPEYLIYWGAYDWQQDFP--NGVNYTIGSSDPATDFNTV 542

Query: 521 -WFFAQVCRRGEDGEYVAT-TWTIKFNMT-----SLTDGTYRLRLAIASATRSNLKVQTN 580
            W          D EY  T  W I F++T          T  ++LA A     N  V   
Sbjct: 543 HWSVFGPTPDNPDVEYDTTHDWAINFSLTKKQLQKRKTATLTIQLAGAKTASGNTDVY-- 602

Query: 581 RKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLHRIYS- 640
                     K D P   LAL +  + + EP  +  L+     ++         +++ S 
Sbjct: 603 ----------KPDEPYTNLALESYINQQEEP--LTMLIGFNQSSSCIVRSAVSCYQVRSR 658

Query: 641 IDIPSSMLVKGDNSIFLTQERNGDPL--------CGILYDYLRLE 644
           +  P+  L  G N++ L   RN   +          + YD LRLE
Sbjct: 663 MTFPADWLQVGSNTLTLHLPRNATDVEDAILPGTVYVQYDALRLE 658

[Close]
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match: A1D144 (Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rglB PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-17
Identity = 130/585 (22.22%), Postives = 225/585 (38.46%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGG-------K 62
           + L+N   K   S  +G V  +   G D LL  +S  +  G +   +  P G        
Sbjct: 30  ITLNNDRFKAVWSKSKGSVVDMFLDGQD-LLGPQSGSTGIGPYLDCYCVPSGFYTAGATN 89

Query: 63  DRYQLLKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIR--YIMRTGIPGFYCY 122
            R Q ++G++    N +   +  ++             P G   +  + +R G  G + +
Sbjct: 90  PRMQYVEGTDSTGTNYAGVILNDTY------------TPTGQQFQQYWFLRDGETGLHMF 149

Query: 123 AIYEHPSECRAF--DLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVP 182
           +   + +E   F  +L + R +F+   + + ++  S+   +  P+P   +    +Q++V 
Sbjct: 150 SRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSE--LQTAPLPS--KNAVSKQVVVQ 209

Query: 183 ESVLLVDPINPDLK----GEVDDKYQYSMDNKDGGVHGWISSSPNN----IGFWIVFPSH 242
           ++    +    D       E   KY +S   +D  VHG      N+     G W+V    
Sbjct: 210 DATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLV---- 269

Query: 243 EFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLN---- 302
                GP   +LTV  G     +    H  G   +T+      + + FGP     N    
Sbjct: 270 -MNTKGPLHSDLTV-DGIVYNYIVSNHHGEGTPNITN-----GFDRTFGPQFYLFNGGKG 329

Query: 303 STSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSF-----YFMANERGAISGRLLVQDRF 362
           STS + +  +      E   L + +W   F  S       Y  +++RG++ GR+ +    
Sbjct: 330 STSSLQDLRS------EAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVDGRVKLPKGA 389

Query: 363 ISSSPIPARDAHIGLSAARKEGAWQTES---KEYQFWVQTDSNGDFTIRNIIPGVYGLHG 422
            +   I   D             +Q  S     YQ+W   D++G F I  ++ G Y L  
Sbjct: 390 TNPIAILTVDGQY----------FQDNSVVPSSYQYWTDIDTSGKFRIDRVVEGKYRLTV 449

Query: 423 WVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRTANSF-YVPDVDP 482
           +  G  GD++    +TV AG  T +    +     G  +W +G PD+++  F +    DP
Sbjct: 450 YADGIFGDFVRDG-VTVKAGKTTTVK-EKWDAESAGKEVWRLGTPDKSSGEFRHGVARDP 509

Query: 483 MYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKD-----WFFAQVCRRGE 542
            +     LH PE    +G ++  SDL    D  + +G +DP  D     W          
Sbjct: 510 THP----LHPPEYLIYWGAYDWQSDLPKGID--YRIGSSDPATDFNTVHWSVFGPTPDNP 562

Query: 543 DGEYVAT-TWTIKFNMT-----SLTDGTYRLRLAIASATRSNLKV 545
           D EY  T  W I F++T     +    T  ++LA A     N  V
Sbjct: 570 DVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDV 562

[Close]
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match: B0XPA2 (Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rglB PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-17
Identity = 124/582 (21.31%), Postives = 231/582 (39.69%), Query Frame = 0 

Query: 101 YIMRTGIPGFYCYAIYEHPSECRAF--DLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPE 160
           + +R G  G + ++   + +E   F  +L + R +F+   + + ++  S+   +  P+P 
Sbjct: 124 WFLRDGETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSE--LQTAPLPS 183

Query: 161 DLRPGRGEQLIVPESVLLVDPINPDLK----GEVDDKYQYSMDNKDGGVHGWISSSPNN- 220
             +    +Q++V ++    +    D       E   KY +S   +D  VHG      N+ 
Sbjct: 184 --KNAVSKQVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSN 243

Query: 221 ---IGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKV 280
               G W+V         GP   +LTV  G     +    H  G   +T+      + + 
Sbjct: 244 GSTYGAWLV-----MNTKGPLHSDLTV-DGIVYNYIVSNHHGEGTPNITN-----GFDRT 303

Query: 281 FGPVLVYLN----STSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSF-----YFMANER 340
           FGP     N    STS + +  +      E   L + +W   F  S       Y  +++R
Sbjct: 304 FGPQFYLFNGGKGSTSSLQDLRS------EAAKLADPSWNAEFYDSIAKHVVGYVPSSKR 363

Query: 341 GAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES----KEYQFWVQTDSNGDF 400
           G++ GR+ +     +S+PI         +    +G +  ++      YQ+W   D++G F
Sbjct: 364 GSVDGRIKLPKG--ASNPI---------AILTVDGQYFQDNSVVPSSYQYWTDIDTSGRF 423

Query: 401 TIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPD 460
            I  ++ G Y L  +  G  GD++    +TV AG  T +    +     G  +W +G PD
Sbjct: 424 RIDRVVEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVK-EKWDAESAGKEIWRLGTPD 483

Query: 461 RTANSF-YVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKD-- 520
           +++  F +    DP +     LH PE    +G ++  SD     D  +T+G +DP  D  
Sbjct: 484 KSSGEFRHGVARDPTHP----LHPPEYLIYWGAYDWQSDFPKGID--YTIGSSDPATDFN 543

Query: 521 ---WFFAQVCRRGEDGEYVAT-TWTIKFNMTSLTDGTYRLRLAIASATRSNLKVQTNRKM 580
              W          + EY  T  W I F++T         +  + ++ ++ L +Q     
Sbjct: 544 TVHWSVFGPTPDNPNVEYNTTHDWKINFSLT---------KKQLRNSKKATLTIQLAGAK 603

Query: 581 LEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLHRIYS-IDI 640
                  +       + LI+ + I  +   +  ++     ++         +++ S ++ 
Sbjct: 604 TASGNTDEYKASEPYINLIHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEF 656

Query: 641 PSSMLVKGDNSIFLTQERNG-DPLCGIL-------YDYLRLE 644
           P+  L  G+N++ L    N  D    IL       YD LRLE
Sbjct: 664 PADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656

[Close]
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match: Q4WR79 (Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rglB PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-17
Identity = 124/582 (21.31%), Postives = 231/582 (39.69%), Query Frame = 0 

Query: 101 YIMRTGIPGFYCYAIYEHPSECRAF--DLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPE 160
           + +R G  G + ++   + +E   F  +L + R +F+   + + ++  S+   +  P+P 
Sbjct: 124 WFLRDGETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSE--LQTAPLPS 183

Query: 161 DLRPGRGEQLIVPESVLLVDPINPDLK----GEVDDKYQYSMDNKDGGVHGWISSSPNN- 220
             +    +Q++V ++    +    D       E   KY +S   +D  VHG      N+ 
Sbjct: 184 --KNAVSKQVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSN 243

Query: 221 ---IGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKV 280
               G W+V         GP   +LTV  G     +    H  G   +T+      + + 
Sbjct: 244 GSTYGAWLV-----MNTKGPLHSDLTV-DGIVYNYIVSNHHGEGTPNITN-----GFDRT 303

Query: 281 FGPVLVYLN----STSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSF-----YFMANER 340
           FGP     N    STS + +  +      E   L + +W   F  S       Y  +++R
Sbjct: 304 FGPQFYLFNGGKGSTSSLQDLRS------EAAKLADPSWNAEFYDSIAKHVVGYVPSSKR 363

Query: 341 GAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES----KEYQFWVQTDSNGDF 400
           G++ GR+ +     +S+PI         +    +G +  ++      YQ+W   D++G F
Sbjct: 364 GSVDGRIKLPKG--ASNPI---------AILTVDGQYFQDNSVVPSSYQYWTDIDTSGRF 423

Query: 401 TIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPD 460
            I  ++ G Y L  +  G  GD++    +TV AG  T +    +     G  +W +G PD
Sbjct: 424 RIDRVVEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVK-EKWDAESAGKEIWRLGTPD 483

Query: 461 RTANSF-YVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKD-- 520
           +++  F +    DP +     LH PE    +G ++  SD     D  +T+G +DP  D  
Sbjct: 484 KSSGEFRHGVARDPTHP----LHPPEYLIYWGAYDWQSDFPKGID--YTIGSSDPATDFN 543

Query: 521 ---WFFAQVCRRGEDGEYVAT-TWTIKFNMTSLTDGTYRLRLAIASATRSNLKVQTNRKM 580
              W          + EY  T  W I F++T         +  + ++ ++ L +Q     
Sbjct: 544 TVHWSVFGPTPDNPNVEYNTTHDWKINFSLT---------KKQLRNSKKATLTIQLAGAK 603

Query: 581 LEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLHRIYS-IDI 640
                  +       + LI+ + I  +   +  ++     ++         +++ S ++ 
Sbjct: 604 TASGNTDEYKASEPYINLIHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEF 656

Query: 641 PSSMLVKGDNSIFLTQERNG-DPLCGIL-------YDYLRLE 644
           P+  L  G+N++ L    N  D    IL       YD LRLE
Sbjct: 664 PADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656

[Close]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match: A0A1S4DTF3 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484616 PE=3 SV=1)

HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 574/646 (88.85%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MDVILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQL 60
           + VILDNGLLKVTISNPQGYV GITYGGMDN+LDVKSSESKRGYWDINWSWPGGKDRYQL
Sbjct: 39  LQVILDNGLLKVTISNPQGYVIGITYGGMDNILDVKSSESKRGYWDINWSWPGGKDRYQL 98

Query: 61  LKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 120
           LKGSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS
Sbjct: 99  LKGSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 158

Query: 121 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPI 180
           ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLV+PI
Sbjct: 159 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVNPI 218

Query: 181 NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG 240
           NPDLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPS+EFRNGGPTKQNLTVHTG
Sbjct: 219 NPDLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTG 278

Query: 241 PTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRML 300
           PTCLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+L+YLNSTSDVSEAHNLWIDAKEQRM 
Sbjct: 279 PTCLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQ 338

Query: 301 EETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT 360
           EETAWPYNFVSSSFY MA ERG+ISGRLLV+DRFISSSPIPARDAH+GLSAAR+EGAWQT
Sbjct: 339 EETAWPYNFVSSSFYLMARERGSISGRLLVRDRFISSSPIPARDAHVGLSAAREEGAWQT 398

Query: 361 ESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILT 420
           ESKEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILT
Sbjct: 399 ESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILT 458

Query: 421 YSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPIS 480
           YSPLRDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLW+GYSD HP +
Sbjct: 459 YSPLRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRN 518

Query: 481 DQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRS 540
           DQ+FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNM SLTDG YRLRL+IASATRS
Sbjct: 519 DQIFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMKSLTDGIYRLRLSIASATRS 578

Query: 541 NLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHG 600
           +LK                         INVNS+ESE SLVFQLM+LGMDNTVCRHG HG
Sbjct: 579 DLK-------------------------INVNSMESESSLVFQLMDLGMDNTVCRHGNHG 638

Query: 601 LHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           L+RIY+ID+PSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPD
Sbjct: 639 LYRIYTIDVPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPD 659

[Close]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match: A0A1S4DU69 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484616 PE=3 SV=1)

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 574/644 (89.13%), Postives = 602/644 (93.48%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           VILDNGLLKVTISNPQGYV GITYGGMDN+LDVKSSESKRGYWDINWSWPGGKDRYQLLK
Sbjct: 15  VILDNGLLKVTISNPQGYVIGITYGGMDNILDVKSSESKRGYWDINWSWPGGKDRYQLLK 74

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           GSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC
Sbjct: 75  GSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 134

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
           RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLV+PINP
Sbjct: 135 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVNPINP 194

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
           DLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPS+EFRNGGPTKQNLTVHTGPT
Sbjct: 195 DLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTGPT 254

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
           CLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+L+YLNSTSDVSEAHNLWIDAKEQRM EE
Sbjct: 255 CLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQEE 314

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
           TAWPYNFVSSSFY MA ERG+ISGRLLV+DRFISSSPIPARDAH+GLSAAR+EGAWQTES
Sbjct: 315 TAWPYNFVSSSFYLMARERGSISGRLLVRDRFISSSPIPARDAHVGLSAAREEGAWQTES 374

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           KEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILTYS
Sbjct: 375 KEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYS 434

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQ 482
           PLRDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLW+GYSD HP +DQ
Sbjct: 435 PLRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRNDQ 494

Query: 483 VFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRSNL 542
           +FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNM SLTDG YRLRL+IASATRS+L
Sbjct: 495 IFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMKSLTDGIYRLRLSIASATRSDL 554

Query: 543 KVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLH 602
           K                         INVNS+ESE SLVFQLM+LGMDNTVCRHG HGL+
Sbjct: 555 K-------------------------INVNSMESESSLVFQLMDLGMDNTVCRHGNHGLY 614

Query: 603 RIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           RIY+ID+PSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPD
Sbjct: 615 RIYTIDVPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPD 633

[Close]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match: A0A1S3B0U4 (probable rhamnogalacturonate lyase B isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484616 PE=4 SV=1)

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 549/618 (88.83%), Postives = 577/618 (93.37%), Query Frame = 0 

Query: 29  MDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRKVFDPST 88
           MDN+LDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVIN+SDDTIEISFRK FD ST
Sbjct: 1   MDNILDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINSSDDTIEISFRKDFDLST 60

Query: 89  RGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISD 148
           RGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISD
Sbjct: 61  RGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISD 120

Query: 149 EKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINPDLKGEVDDKYQYSMDNKDGGVHGWIS 208
           EKQRIMPMPEDLRPGRGEQLIVPESVLLV+PINPDLKGEVDDKYQYS DNKDGGVHGWIS
Sbjct: 121 EKQRIMPMPEDLRPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSEDNKDGGVHGWIS 180

Query: 209 SSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWR 268
           SSPNNIGFWIVFPS+EFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGE+ILTHIKEGE WR
Sbjct: 181 SSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGEAWR 240

Query: 269 KVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYFMANERGAISGRL 328
           KVFGP+L+YLNSTSDVSEAHNLWIDAKEQRM EETAWPYNFVSSSFY MA ERG+ISGRL
Sbjct: 241 KVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQEETAWPYNFVSSSFYLMARERGSISGRL 300

Query: 329 LVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVQTDSNGDFTIRNIIPGVYG 388
           LV+DRFISSSPIPARDAH+GLSAAR+EGAWQTESKEYQFWV+TDSNGDFTIRNIIPGVYG
Sbjct: 301 LVRDRFISSSPIPARDAHVGLSAAREEGAWQTESKEYQFWVKTDSNGDFTIRNIIPGVYG 360

Query: 389 LHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRTANSFYVPDV 448
           LHGWVPGFIGDYLHKSL+TV AGS+THLGILTYSPLRDGPT+WEIG+PDRTANSFYVPDV
Sbjct: 361 LHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTVWEIGFPDRTANSFYVPDV 420

Query: 449 DPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKDWFFAQVCRRGEDGE 508
           +PMYVNKLFLHSPEKFRQYGLW+GYSD HP +DQ+FTVGINDPKKDWFFAQVCRRGEDG+
Sbjct: 421 NPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRNDQIFTVGINDPKKDWFFAQVCRRGEDGK 480

Query: 509 YVATTWTIKFNMTSLTDGTYRLRLAIASATRSNLKVQTNRKMLEKIGFSKLDCPLKRLAL 568
           YVATTWTIKFNM SLTDG YRLRL+IASATRS+LK                         
Sbjct: 481 YVATTWTIKFNMKSLTDGIYRLRLSIASATRSDLK------------------------- 540

Query: 569 INVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLHRIYSIDIPSSMLVKGDNSIFLTQERN 628
           INVNS+ESE SLVFQLM+LGMDNTVCRHG HGL+RIY+ID+PSSMLVKGDNSIFLTQ RN
Sbjct: 541 INVNSMESESSLVFQLMDLGMDNTVCRHGNHGLYRIYTIDVPSSMLVKGDNSIFLTQARN 593

Query: 629 GDPLCGILYDYLRLEAPD 647
           GD LCGILYDYLRLEAPD
Sbjct: 601 GDALCGILYDYLRLEAPD 593

[Close]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match: A0A0A0KL71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513660 PE=4 SV=1)

HSP 1 Score: 1142.5 bits (2954), Expect = 0.0e+00
Identity = 540/611 (88.38%), Postives = 564/611 (92.31%), Query Frame = 0 

Query: 36  KSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPL 95
           +S   K  YWDINWSWPGGKDRYQLLKGSEFNVIN+SDDTIEISFRK FD STRGNKLPL
Sbjct: 45  QSIRCKIKYWDINWSWPGGKDRYQLLKGSEFNVINSSDDTIEISFRKDFDLSTRGNKLPL 104

Query: 96  GVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMP 155
           GVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMP
Sbjct: 105 GVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMP 164

Query: 156 MPEDLRPGRGEQLIVPESVLLVDPINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIG 215
           MPEDLRPGRGE+LIVPESVLLV+PINPDLKGEVDDKYQYS DNKDGGVHGWISSSPNNIG
Sbjct: 165 MPEDLRPGRGEELIVPESVLLVNPINPDLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIG 224

Query: 216 FWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVL 275
           FWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+L
Sbjct: 225 FWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIKEGEAWRKVFGPIL 284

Query: 276 VYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYFMANERGAISGRLLVQDRFI 335
           VYLNSTSDVSEAHNLWIDAKEQRM EETAWPYNFV+SSFY MA ERG+ISGRLLV+DRF+
Sbjct: 285 VYLNSTSDVSEAHNLWIDAKEQRMQEETAWPYNFVASSFYLMARERGSISGRLLVRDRFV 344

Query: 336 SSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPG 395
           SSSPIPARDAHIGLSAAR+EGAWQ ESKEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPG
Sbjct: 345 SSSPIPARDAHIGLSAAREEGAWQIESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPG 404

Query: 396 FIGDYLHKSLITVDAGSHTHLGILTYSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNK 455
           FIGDYLHKSL+TV AGS+ HLGILTYSP RDGPT+WEIG+PDRTANSFYVPDV+PMYVNK
Sbjct: 405 FIGDYLHKSLVTVSAGSYNHLGILTYSPPRDGPTVWEIGFPDRTANSFYVPDVNPMYVNK 464

Query: 456 LFLHSPEKFRQYGLWEGYSDLHPISDQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWT 515
           LFLHSPEKFRQYGLWEGYSDLHP +DQ+FTVGINDPKKDWFFAQVCRRGEDG+YVATTWT
Sbjct: 465 LFLHSPEKFRQYGLWEGYSDLHPRNDQIFTVGINDPKKDWFFAQVCRRGEDGKYVATTWT 524

Query: 516 IKFNMTSLTDGTYRLRLAIASATRSNLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIE 575
           IKFNMTSLTDGTYRLRL+IASATRS+LK                         INVNS+ 
Sbjct: 525 IKFNMTSLTDGTYRLRLSIASATRSDLK-------------------------INVNSMG 584

Query: 576 SEPSLVFQLMNLGMDNTVCRHGIHGLHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGI 635
           SE SLVFQLMNLGMDNTVCRHG HGL+RIYSIDIPSSMLVKGDN IFLTQ RNGDPLCGI
Sbjct: 585 SESSLVFQLMNLGMDNTVCRHGNHGLYRIYSIDIPSSMLVKGDNCIFLTQARNGDPLCGI 630

Query: 636 LYDYLRLEAPD 647
           LYDYLRLEAPD
Sbjct: 645 LYDYLRLEAPD 630

[Close]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match: A0A5D3CPD7 (Putative rhamnogalacturonate lyase B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006400 PE=4 SV=1)

HSP 1 Score: 1095.5 bits (2832), Expect = 0.0e+00
Identity = 518/586 (88.40%), Postives = 545/586 (93.00%), Query Frame = 0 

Query: 61  LKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 120
           LKGSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS
Sbjct: 66  LKGSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 125

Query: 121 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPI 180
           ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLV+PI
Sbjct: 126 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVNPI 185

Query: 181 NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG 240
           NPDLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPS+EFRNGGPTKQNLTVHTG
Sbjct: 186 NPDLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTG 245

Query: 241 PTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRML 300
           PTCLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+L+YLNSTSDVSEAHNLWIDAKEQRM 
Sbjct: 246 PTCLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQ 305

Query: 301 EETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT 360
           EETAWPYNFVSSSFY MA ERG+ISGRLLV+DRFISSSPIPARDAH+GLSAAR+EGAWQT
Sbjct: 306 EETAWPYNFVSSSFYLMARERGSISGRLLVRDRFISSSPIPARDAHVGLSAAREEGAWQT 365

Query: 361 ESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILT 420
           ESKEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILT
Sbjct: 366 ESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILT 425

Query: 421 YSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPIS 480
           YSPLRDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLW+GYSD HP +
Sbjct: 426 YSPLRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRN 485

Query: 481 DQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRS 540
           DQ+FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNM SLTDG YRLRL+IASATRS
Sbjct: 486 DQIFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMKSLTDGIYRLRLSIASATRS 545

Query: 541 NLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHG 600
           +LK                         INVNS+ESE SLVFQLM+LGMDNTVCRHG HG
Sbjct: 546 DLK-------------------------INVNSMESESSLVFQLMDLGMDNTVCRHGNHG 605

Query: 601 LHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           L+RIY+ID+PSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPD
Sbjct: 606 LYRIYTIDVPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPD 626

[Close]
BLAST of Lsi01G004350 vs. NCBI nr
Match: XP_038881216.1 (probable rhamnogalacturonate lyase B isoform X1 [Benincasa hispida])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 593/648 (91.51%), Postives = 611/648 (94.29%), Query Frame = 0 

Query: 1   MDVILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQL 60
           + V+LDNGLLKVTISNPQGYVSGI YGG+DNLLDVKSSESKRGYWDINWSWPGGKDRYQL
Sbjct: 39  LQVVLDNGLLKVTISNPQGYVSGIMYGGLDNLLDVKSSESKRGYWDINWSWPGGKDRYQL 98

Query: 61  LKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 120
           LKGSEFNVINTSDDTIEISFRKV DPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS
Sbjct: 99  LKGSEFNVINTSDDTIEISFRKVLDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 158

Query: 121 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPI 180
           ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDL PGRGEQLIVPESVLLV+PI
Sbjct: 159 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPI 218

Query: 181 NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG 240
           NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG
Sbjct: 219 NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG 278

Query: 241 PTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRML 300
           PTCLAMFHGTHYIGE+ILTHIKEG+TWRKVFGP+LVYLNSTSDVSEAHNLWIDAKEQRML
Sbjct: 279 PTCLAMFHGTHYIGEDILTHIKEGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRML 338

Query: 301 EETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT 360
           EETAWPYNFVSSSFY MANERG+ISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT
Sbjct: 339 EETAWPYNFVSSSFYLMANERGSISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT 398

Query: 361 ESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILT 420
           ESKEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILT
Sbjct: 399 ESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILT 458

Query: 421 YSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPIS 480
           YSPLRDGPTLWEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLWEGYSDLHPI+
Sbjct: 459 YSPLRDGPTLWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPIN 518

Query: 481 DQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRS 540
           DQVFTVGIN+PKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLT+ TYRLRLAIASATRS
Sbjct: 519 DQVFTVGINNPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRS 578

Query: 541 NLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHG 600
           NLK                         INVNS  SE SLVFQLM+LGMDNTVCRHGIHG
Sbjct: 579 NLK-------------------------INVNSKGSEQSLVFQLMDLGMDNTVCRHGIHG 638

Query: 601 LHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPDTP 649
           L+RIYSIDIPSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPDTP
Sbjct: 639 LYRIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDTP 661

[Close]
BLAST of Lsi01G004350 vs. NCBI nr
Match: XP_038881217.1 (probable rhamnogalacturonate lyase B isoform X2 [Benincasa hispida])

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 593/646 (91.80%), Postives = 610/646 (94.43%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           V+LDNGLLKVTISNPQGYVSGI YGG+DNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK
Sbjct: 15  VVLDNGLLKVTISNPQGYVSGIMYGGLDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 74

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           GSEFNVINTSDDTIEISFRKV DPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC
Sbjct: 75  GSEFNVINTSDDTIEISFRKVLDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 134

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
           RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDL PGRGEQLIVPESVLLV+PINP
Sbjct: 135 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPINP 194

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
           DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT
Sbjct: 195 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 254

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
           CLAMFHGTHYIGE+ILTHIKEG+TWRKVFGP+LVYLNSTSDVSEAHNLWIDAKEQRMLEE
Sbjct: 255 CLAMFHGTHYIGEDILTHIKEGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMLEE 314

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
           TAWPYNFVSSSFY MANERG+ISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES
Sbjct: 315 TAWPYNFVSSSFYLMANERGSISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 374

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           KEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILTYS
Sbjct: 375 KEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYS 434

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQ 482
           PLRDGPTLWEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLWEGYSDLHPI+DQ
Sbjct: 435 PLRDGPTLWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQ 494

Query: 483 VFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRSNL 542
           VFTVGIN+PKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLT+ TYRLRLAIASATRSNL
Sbjct: 495 VFTVGINNPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRSNL 554

Query: 543 KVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLH 602
           K                         INVNS  SE SLVFQLM+LGMDNTVCRHGIHGL+
Sbjct: 555 K-------------------------INVNSKGSEQSLVFQLMDLGMDNTVCRHGIHGLY 614

Query: 603 RIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPDTP 649
           RIYSIDIPSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPDTP
Sbjct: 615 RIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDTP 635

[Close]
BLAST of Lsi01G004350 vs. NCBI nr
Match: XP_011658136.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus])

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 578/644 (89.75%), Postives = 601/644 (93.32%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           VILDNGLLKVTISNPQGYV GITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK
Sbjct: 15  VILDNGLLKVTISNPQGYVIGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 74

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           GSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC
Sbjct: 75  GSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 134

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
           RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGE+LIVPESVLLV+PINP
Sbjct: 135 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEELIVPESVLLVNPINP 194

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
           DLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT
Sbjct: 195 DLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 254

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
           CLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+LVYLNSTSDVSEAHNLWIDAKEQRM EE
Sbjct: 255 CLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMQEE 314

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
           TAWPYNFV+SSFY MA ERG+ISGRLLV+DRF+SSSPIPARDAHIGLSAAR+EGAWQ ES
Sbjct: 315 TAWPYNFVASSFYLMARERGSISGRLLVRDRFVSSSPIPARDAHIGLSAAREEGAWQIES 374

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           KEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+ HLGILTYS
Sbjct: 375 KEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYNHLGILTYS 434

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQ 482
           P RDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLWEGYSDLHP +DQ
Sbjct: 435 PPRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPRNDQ 494

Query: 483 VFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRSNL 542
           +FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNMTSLTDGTYRLRL+IASATRS+L
Sbjct: 495 IFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMTSLTDGTYRLRLSIASATRSDL 554

Query: 543 KVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLH 602
           K                         INVNS+ SE SLVFQLMNLGMDNTVCRHG HGL+
Sbjct: 555 K-------------------------INVNSMGSESSLVFQLMNLGMDNTVCRHGNHGLY 614

Query: 603 RIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           RIYSIDIPSSMLVKGDN IFLTQ RNGDPLCGILYDYLRLEAPD
Sbjct: 615 RIYSIDIPSSMLVKGDNCIFLTQARNGDPLCGILYDYLRLEAPD 633

[Close]
BLAST of Lsi01G004350 vs. NCBI nr
Match: KAE8647659.1 (hypothetical protein Csa_004258 [Cucumis sativus])

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 578/644 (89.75%), Postives = 601/644 (93.32%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           VILDNGLLKVTISNPQGYV GITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK
Sbjct: 34  VILDNGLLKVTISNPQGYVIGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 93

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           GSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC
Sbjct: 94  GSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 153

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
           RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGE+LIVPESVLLV+PINP
Sbjct: 154 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEELIVPESVLLVNPINP 213

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
           DLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT
Sbjct: 214 DLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 273

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
           CLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+LVYLNSTSDVSEAHNLWIDAKEQRM EE
Sbjct: 274 CLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMQEE 333

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
           TAWPYNFV+SSFY MA ERG+ISGRLLV+DRF+SSSPIPARDAHIGLSAAR+EGAWQ ES
Sbjct: 334 TAWPYNFVASSFYLMARERGSISGRLLVRDRFVSSSPIPARDAHIGLSAAREEGAWQIES 393

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           KEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+ HLGILTYS
Sbjct: 394 KEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYNHLGILTYS 453

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQ 482
           P RDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLWEGYSDLHP +DQ
Sbjct: 454 PPRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPRNDQ 513

Query: 483 VFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRSNL 542
           +FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNMTSLTDGTYRLRL+IASATRS+L
Sbjct: 514 IFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMTSLTDGTYRLRLSIASATRSDL 573

Query: 543 KVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLH 602
           K                         INVNS+ SE SLVFQLMNLGMDNTVCRHG HGL+
Sbjct: 574 K-------------------------INVNSMGSESSLVFQLMNLGMDNTVCRHGNHGLY 633

Query: 603 RIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           RIYSIDIPSSMLVKGDN IFLTQ RNGDPLCGILYDYLRLEAPD
Sbjct: 634 RIYSIDIPSSMLVKGDNCIFLTQARNGDPLCGILYDYLRLEAPD 652

[Close]
BLAST of Lsi01G004350 vs. NCBI nr
Match: XP_008440003.1 (PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >XP_016899269.1 PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo])

HSP 1 Score: 1216.1 bits (3145), Expect = 0.0e+00
Identity = 574/646 (88.85%), Postives = 603/646 (93.34%), Query Frame = 0 

Query: 1   MDVILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQL 60
           + VILDNGLLKVTISNPQGYV GITYGGMDN+LDVKSSESKRGYWDINWSWPGGKDRYQL
Sbjct: 39  LQVILDNGLLKVTISNPQGYVIGITYGGMDNILDVKSSESKRGYWDINWSWPGGKDRYQL 98

Query: 61  LKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 120
           LKGSEFNVIN+SDDTIEISFRK FD STRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS
Sbjct: 99  LKGSEFNVINSSDDTIEISFRKDFDLSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPS 158

Query: 121 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPI 180
           ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLV+PI
Sbjct: 159 ECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVNPI 218

Query: 181 NPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTG 240
           NPDLKGEVDDKYQYS DNKDGGVHGWISSSPNNIGFWIVFPS+EFRNGGPTKQNLTVHTG
Sbjct: 219 NPDLKGEVDDKYQYSEDNKDGGVHGWISSSPNNIGFWIVFPSYEFRNGGPTKQNLTVHTG 278

Query: 241 PTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRML 300
           PTCLAMFHGTHYIGE+ILTHIKEGE WRKVFGP+L+YLNSTSDVSEAHNLWIDAKEQRM 
Sbjct: 279 PTCLAMFHGTHYIGEDILTHIKEGEAWRKVFGPILIYLNSTSDVSEAHNLWIDAKEQRMQ 338

Query: 301 EETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQT 360
           EETAWPYNFVSSSFY MA ERG+ISGRLLV+DRFISSSPIPARDAH+GLSAAR+EGAWQT
Sbjct: 339 EETAWPYNFVSSSFYLMARERGSISGRLLVRDRFISSSPIPARDAHVGLSAAREEGAWQT 398

Query: 361 ESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILT 420
           ESKEYQFWV+TDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSL+TV AGS+THLGILT
Sbjct: 399 ESKEYQFWVKTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILT 458

Query: 421 YSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPIS 480
           YSPLRDGPT+WEIG+PDRTANSFYVPDV+PMYVNKLFLHSPEKFRQYGLW+GYSD HP +
Sbjct: 459 YSPLRDGPTVWEIGFPDRTANSFYVPDVNPMYVNKLFLHSPEKFRQYGLWDGYSDSHPRN 518

Query: 481 DQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDGTYRLRLAIASATRS 540
           DQ+FTVGINDPKKDWFFAQVCRRGEDG+YVATTWTIKFNM SLTDG YRLRL+IASATRS
Sbjct: 519 DQIFTVGINDPKKDWFFAQVCRRGEDGKYVATTWTIKFNMKSLTDGIYRLRLSIASATRS 578

Query: 541 NLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHG 600
           +LK                         INVNS+ESE SLVFQLM+LGMDNTVCRHG HG
Sbjct: 579 DLK-------------------------INVNSMESESSLVFQLMDLGMDNTVCRHGNHG 638

Query: 601 LHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPD 647
           L+RIY+ID+PSSMLVKGDNSIFLTQ RNGD LCGILYDYLRLEAPD
Sbjct: 639 LYRIYTIDVPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPD 659

[Close]
BLAST of Lsi01G004350 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 680.6 bits (1755), Expect = 1.2e-195
Identity = 313/643 (48.68%), Postives = 433/643 (67.34%), Query Frame = 0 

Query: 5   LDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGS 64
           +DNG+ +VT+S P G V+GI Y G+DNLL+V + E  RGYWD+ W   G    + ++KGS
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTAGGFDVIKGS 60

Query: 65  EFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRA 124
            F VI  +++ IE+SF + +DPS  G  +PL +D R++M +G  GFY YAIYEH  E  A
Sbjct: 61  NFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWPA 120

Query: 125 FDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINPDL 184
           F LA+TR+ FKLR+EKFHYMA++D++QR MP+P+D  P RG+ L  PE+VLLV+P+    
Sbjct: 121 FSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQF 180

Query: 185 KGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCL 244
           KGEVDDKYQYS +NKD  VHGWI +   ++GFW++ PSHE+R GGP KQNLT H GPT L
Sbjct: 181 KGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTAL 240

Query: 245 AMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLN-STSDVSEAHNLWIDAKEQRMLEET 304
           A+F   HY GE+++    EGE W+KVFGPV VYLN ST D ++   LW DAK Q  +E  
Sbjct: 241 AVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEAE 300

Query: 305 AWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESK 364
           +WPY+F +S  Y    +RG + GRLLVQDR++    I A   ++GL+     G+WQ E K
Sbjct: 301 SWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECK 360

Query: 365 EYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYSP 424
           EYQFW +TD  G F I  I PG Y L+ W+PGFIGDY +  +IT+ +G + ++  L Y P
Sbjct: 361 EYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQP 420

Query: 425 LRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQV 484
            R+G TLWEIG+PDR+A  FYVPD +P Y+N L+ + P++FRQYGLWE Y++L+P  D V
Sbjct: 421 PRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLV 480

Query: 485 FTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSL-TDGTYRLRLAIASATRSNL 544
           + VG +D +KDWF+AQV R+ ++  Y  TTW IKF + ++  + +Y LR+AIASAT S L
Sbjct: 481 YVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSEL 540

Query: 545 KVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGLH 604
           +++ N                      N N+     S +F    +G DN++ RHGIHGL+
Sbjct: 541 QIRVN----------------------NANA-----SPMFTSGLIGRDNSIARHGIHGLY 600

Query: 605 RIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAP 646
            ++++++  S L++G+N++FLTQ R+  P  GI+YDY+R EAP
Sbjct: 601 WLFNVEVAGSKLLEGENTLFLTQPRSTSPFQGIMYDYIRFEAP 616

[Close]
BLAST of Lsi01G004350 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 662.9 bits (1709), Expect = 2.6e-190
Identity = 308/644 (47.83%), Postives = 432/644 (67.08%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           V++DNG+L+VT+S P G ++GI Y G+DN+L+V++ E+ RGYWD++W+ PGGK  + ++ 
Sbjct: 58  VVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVIS 117

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           G  F VI  +++ +EISF + +DPS  G  +PL +D R+IM  G  G Y Y IYEH  + 
Sbjct: 118 GVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYGIYEHLKDW 177

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
             F+L +TR+ FKLR++KFHYMA++D+++RIMP P+DL  GR + L   E+ LL  P +P
Sbjct: 178 PGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDP 237

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
            L+GEVDDKYQYS +NKD  VHGWIS  P  +GFW + PS+EFR+GGP KQNLT H GPT
Sbjct: 238 RLQGEVDDKYQYSCENKDLRVHGWISFDP-PVGFWQITPSNEFRSGGPLKQNLTSHVGPT 297

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
            LA+FH THY G+ ++   + GE W+KV+GPV +YLNST++  +   LW DAK + M E 
Sbjct: 298 TLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLCLWDDAKIKMMAEV 357

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
             WPY+FV+S  Y  + ERG   GRLL++DRFI++  I AR A++GL+     G+WQ E 
Sbjct: 358 ERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAPPGDSGSWQIEC 417

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           K YQFW   D  G F+I N+ PG Y L+ WVP FIGDY + +++ V +G    +G + Y 
Sbjct: 418 KGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYE 477

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHPISDQ 482
           P RDGPTLWEIG PDR A+ F++PD DP  VN++ +H  ++FRQYGLW+ Y+D++P  D 
Sbjct: 478 PPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWKKYTDMYPNDDL 537

Query: 483 VFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTD-GTYRLRLAIASATRSN 542
           V+TVG++D ++DWFFA V R+  D  +  TTW I FN+ ++     Y+LR+AIASAT + 
Sbjct: 538 VYTVGVSDYRRDWFFAHVPRKKGD-VHEGTTWQIIFNLENIDQKANYKLRVAIASATLAE 597

Query: 543 LKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHGL 602
           L+                         I +N  E+   L F    +G DN++ RHGIHG+
Sbjct: 598 LQ-------------------------IRINDAEAIRPL-FTTGLIGRDNSIARHGIHGV 657

Query: 603 HRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAP 646
           + +Y+++IP + LV+GDN+IFL Q R   P  GI+YDY+RLE P
Sbjct: 658 YMLYAVNIPGNRLVQGDNTIFLKQPRCNGPFQGIMYDYIRLEGP 673

[Close]
BLAST of Lsi01G004350 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 646.4 bits (1666), Expect = 2.5e-185
Identity = 308/649 (47.46%), Postives = 436/649 (67.18%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWS---WPGGKDRYQ 62
           V++ NG +KVTIS P G+V+GI+Y G+DNLL+  + +  RGYWD+ WS    PG   + +
Sbjct: 16  VVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEGTPGTTGKSE 75

Query: 63  LLKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHP 122
            +KG+ F V+  +++ +EISF + +D S + +  P+ VD R+IMR  + GFY YAI+EH 
Sbjct: 76  RIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGFYSYAIFEHL 135

Query: 123 SECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDP 182
           +E  AF+L QTR+V+KLR++KF YMAI+D +QR MP+PED    RG  L  PE+VLLV P
Sbjct: 136 AEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHP 195

Query: 183 INPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHT 242
           +  + KGEVDDKY+YS +NKD  VHGWIS +  ++G W + PS+EFR+GG +KQNLT H 
Sbjct: 196 VEDEFKGEVDDKYEYSSENKDLKVHGWISHN-LDLGCWQIIPSNEFRSGGLSKQNLTSHV 255

Query: 243 GPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSD-VSEAHNLWIDAKEQR 302
           GP  LAMF   HY GE+++  +K G++W+KVFGPV  YLN   D  S+  +LW DAK Q 
Sbjct: 256 GPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSLWQDAKNQM 315

Query: 303 MLEETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAW 362
           + E  +WPY+F +S  + ++++RG ISGRLLV D+F+S   +PA  A +GL+   + G+W
Sbjct: 316 LTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLAPPGEVGSW 375

Query: 363 QTESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGI 422
           Q ESK YQFW + DS+G F I +I  G Y L+G+V G+IGDY ++ LI + AG    +G 
Sbjct: 376 QLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITAGCDIDVGN 435

Query: 423 LTYSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHP 482
           + Y P RDGPT+WEIG PDR+A  F+VPD +P Y+NKL++  P++FRQYGLWE Y++L+P
Sbjct: 436 IVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYP 495

Query: 483 ISDQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTDG-TYRLRLAIASA 542
             D VFT+G++D KKDWFFA V R+  D  Y  TTW IKF + ++    TY++R+A+A+A
Sbjct: 496 KEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATA 555

Query: 543 TRSNLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHG 602
             + L+V+ N    EK                         + +F    +G DN + RHG
Sbjct: 556 NVAELQVRMNDDDTEK------------------------TTPIFTTGVIGHDNAIARHG 615

Query: 603 IHGLHRIYSIDIPSSMLVKGDNSIFLTQE-RNGDPLCGILYDYLRLEAP 646
           IHG++R+Y++D+PS  LV+GDN++FLTQ         G++YDY+RLE P
Sbjct: 616 IHGIYRLYNVDVPSEKLVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGP 639

[Close]
BLAST of Lsi01G004350 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 630.9 bits (1626), Expect = 1.1e-180
Identity = 300/653 (45.94%), Postives = 434/653 (66.46%), Query Frame = 0 

Query: 5   LDNGLLKVTISNPQGYVSGITYGGMDNLLD-VKSSESKRGYWDINWSWPGGKDR-----Y 64
           ++N  L++T+SNP+G+V+GI Y G+DN+L    + E  RGYWD+ W++PG K +      
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 65  QLLKGSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEH 124
             ++ ++  VI  +D+ IE+SF + ++ S+    +P+ +D R++M     GFY YAI+E 
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTSST-TAVPVNIDKRFVMLQNSSGFYSYAIFER 120

Query: 125 PSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVD 184
                A +L   R+VFKL ++KFHYMAISD++QR MP+P+D  P RG+ L  PE+V L+D
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180

Query: 185 PINPDLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVH 244
           PI P+ KGEVDDKY+YSM++KD  VHGWIS++ +++GFW + PS+EFR+ GP KQ L  H
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTN-DSVGFWQITPSNEFRSAGPLKQFLGSH 240

Query: 245 TGPTCLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQR 304
            GPT LA+FH THY+G +++   K GE W+KVFGPV +YLNS     +   LW +AK Q 
Sbjct: 241 VGPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQT 300

Query: 305 MLEETAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAW 364
            +EE  WPYNF +S  +  +++RG++SGRLLV+DRFISS  IPA  +++GL+A    G+W
Sbjct: 301 KIEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSW 360

Query: 365 QTESKEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGI 424
           Q E K YQFW + D NG F+I N+  G Y L+ + PGFIGDY + ++  +  GS   LG 
Sbjct: 361 QRECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGD 420

Query: 425 LTYSPLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHSPEKFRQYGLWEGYSDLHP 484
           L Y P RDG TLWEIG PDR+A  FY+PD +P +VNKL+L+  +K+RQYGLWE YS+L+P
Sbjct: 421 LVYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYP 480

Query: 485 ISDQVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKF----NMTSLTDGTYRLRLAI 544
             D V+ V I+D  K+WFF QV R+  +G Y  TTW I+F     M ++T G ++LR+A+
Sbjct: 481 DEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVT-GNFKLRIAL 540

Query: 545 ASATRSNLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVC 604
           A++  + L+V+                         VN + ++P L F+   +G DNT+ 
Sbjct: 541 ATSNVAELQVR-------------------------VNDLSADPPL-FRTEQIGRDNTIA 600

Query: 605 RHGIHGLHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAPDT 648
           RHGIHGL+ +YS+++P++ L  G+N+I+LTQ     P  G++YDY+RLE PD+
Sbjct: 601 RHGIHGLYWLYSVNVPAASLHVGNNTIYLTQALATSPFQGLMYDYIRLEYPDS 624

[Close]
BLAST of Lsi01G004350 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 617.8 bits (1592), Expect = 9.6e-177
Identity = 297/645 (46.05%), Postives = 411/645 (63.72%), Query Frame = 0 

Query: 3   VILDNGLLKVTISNPQGYVSGITYGGMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLK 62
           V++DNG+++VT SNP+G ++GI Y G+DN+LD K  +  RGYWD+ W  P  K +   L+
Sbjct: 62  VVVDNGIVQVTFSNPEGLITGIKYHGIDNVLDDKIDD--RGYWDVVWYEPEKKQKTDKLE 121

Query: 63  GSEFNVINTSDDTIEISFRKVFDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSEC 122
           G++F +I  +++ IEISF + +  S RG+ +PL VD RYI+R+G+ G Y Y I E     
Sbjct: 122 GTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSGVSGLYMYGILERLEGW 181

Query: 123 RAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRPGRGEQLIVPESVLLVDPINP 182
              D+ Q R+VFKL  +KF +MAISD++QR MP   D      + L   E+VLL +P NP
Sbjct: 182 PDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRE--NSKSLAYKEAVLLTNPSNP 241

Query: 183 DLKGEVDDKYQYSMDNKDGGVHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPT 242
             KGEVDDKY YSM++KD  VHGWISS P  +GFW++ PS EFR GGP KQ+LT H GP 
Sbjct: 242 MFKGEVDDKYMYSMEDKDNNVHGWISSDP-PVGFWMITPSDEFRLGGPIKQDLTSHAGPI 301

Query: 243 CLAMFHGTHYIGENILTHIKEGETWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEE 302
            L+MF  THY G+ +    + GE W+KVFGPVL YLNS S       LW DAK Q   E 
Sbjct: 302 TLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDAKRQMAAEV 361

Query: 303 TAWPYNFVSSSFYFMANERGAISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTES 362
            +WPY+F++S  Y + ++RG + G+ L++D ++S   I  + A +GL+   + G+WQTES
Sbjct: 362 KSWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAGSWQTES 421

Query: 363 KEYQFWVQTDSNGDFTIRNIIPGVYGLHGWVPGFIGDYLHKSLITVDAGSHTHLGILTYS 422
           K YQFW + D  G F I N+  G Y L+ W  GFIGDY ++  IT+  GS  ++G L Y 
Sbjct: 422 KGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYE 481

Query: 423 PLRDGPTLWEIGYPDRTANSFYVPDVDPMYVNKLFLHS-PEKFRQYGLWEGYSDLHPISD 482
           P R+GPTLWEIG PDRTA  FY+PD  P  +NKL+++   ++FRQYGLW+ Y+DL+P +D
Sbjct: 482 PPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQND 541

Query: 483 QVFTVGINDPKKDWFFAQVCRRGEDGEYVATTWTIKFNMTSLTD-GTYRLRLAIASATRS 542
            V+T+G++D + DWFFA V R   +  Y  TTW I FN+ ++   G Y LR+A+ASA  S
Sbjct: 542 LVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAADS 601

Query: 543 NLKVQTNRKMLEKIGFSKLDCPLKRLALINVNSIESEPSLVFQLMNLGMDNTVCRHGIHG 602
            L+++ N                           + +   +F    +G DN + RHGIHG
Sbjct: 602 ELQIRIN---------------------------DPKSDAIFTTGFIGKDNAIARHGIHG 661

Query: 603 LHRIYSIDIPSSMLVKGDNSIFLTQERNGDPLCGILYDYLRLEAP 646
           L+R+YSID+  ++L  GDN+IFLTQ R+  P  GI+YDY+RLE+P
Sbjct: 662 LYRLYSIDVAGNLLSVGDNTIFLTQTRSRTPFQGIMYDYIRLESP 674

The following BLAST results are available for this feature:
BLAST of Lsi01G004350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5AZ858.3e-2421.57Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ... [more]
Q0C7K72.4e-2322.39Probable rhamnogalacturonate lyase B OS=Aspergillus terreus (strain NIH 2624 / F... [more]
A1D1441.2e-1722.22Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 /... [more]
B0XPA22.0e-1721.31Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS... [more]
Q4WR792.0e-1721.31Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain ATCC MYA-46... [more]
BLAST of Lsi01G004350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DTF30.0e+0088.85Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484616 PE=3 SV=1[more]
A0A1S4DU690.0e+0089.13Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484616 PE=3 SV=1[more]
A0A1S3B0U40.0e+0088.83probable rhamnogalacturonate lyase B isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KL710.0e+0088.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513660 PE=4 SV=1[more]
A0A5D3CPD70.0e+0088.40Putative rhamnogalacturonate lyase B isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
BLAST of Lsi01G004350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881216.10.0e+0091.51probable rhamnogalacturonate lyase B isoform X1 [Benincasa hispida][more]
XP_038881217.10.0e+0091.80probable rhamnogalacturonate lyase B isoform X2 [Benincasa hispida][more]
XP_011658136.10.0e+0089.75probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus][more]
KAE8647659.10.0e+0089.75hypothetical protein Csa_004258 [Cucumis sativus][more]
XP_008440003.10.0e+0088.85PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >XP_01... [more]
BLAST of Lsi01G004350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09890.11.2e-19548.68Rhamnogalacturonate lyase family protein [more]
AT1G09910.12.6e-19047.83Rhamnogalacturonate lyase family protein [more]
AT4G24430.12.5e-18547.46Rhamnogalacturonate lyase family protein [more]
AT1G09880.11.1e-18045.94Rhamnogalacturonate lyase family protein [more]
AT2G22620.19.6e-17746.05Rhamnogalacturonate lyase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010325Rhamnogalacturonate lyasePFAMPF06045Rhamnogal_lyasecoord: 2..188
e-value: 2.0E-70
score: 236.6
NoneNo IPR availableGENE3D2.60.120.260coord: 427..642
e-value: 1.4E-13
score: 52.8
NoneNo IPR availableGENE3D2.60.40.1120coord: 317..419
e-value: 1.1E-8
score: 37.1
NoneNo IPR availablePANTHERPTHR32018:SF22POLYSACCHARIDE LYASE FAMILY 4 PROTEINcoord: 6..646
NoneNo IPR availablePANTHERPTHR32018RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 6..646
NoneNo IPR availableCDDcd10320RGL4_Ncoord: 3..287
e-value: 3.92295E-70
score: 226.886
NoneNo IPR availableCDDcd10317RGL4_Ccoord: 431..643
e-value: 1.78971E-39
score: 140.488
IPR029413Rhamnogalacturonan lyase, domain IIPFAMPF14686fn3_3coord: 352..415
e-value: 4.1E-19
score: 68.2
IPR029413Rhamnogalacturonan lyase, domain IICDDcd10316RGL4_Mcoord: 320..417
e-value: 3.39887E-27
score: 103.483
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3D2.70.98.10coord: 1..292
e-value: 1.4E-13
score: 52.9
IPR029411Rhamnogalacturonan lyase, domain IIIPFAMPF14683CBM-likecoord: 429..642
e-value: 1.2E-40
score: 139.2
IPR011013Galactose mutarotase-like domain superfamilySUPERFAMILY74650Galactose mutarotase-likecoord: 6..282
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 426..643
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 316..418

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G004350.1Lsi01G004350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0102210 rhamnogalacturonan endolyase activity
molecular_function GO:0003824 catalytic activity