Lsi01G004270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G004270
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF584
Locationchr01: 3613737 .. 3615161 (+)
RNA-Seq ExpressionLsi01G004270
SyntenyLsi01G004270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTACAATTCATCTGCTTTTTATTATCTTTTTTGGGGTTTCCCTATTCTTGCTGGTTGCCATTTCTGAGCCTGAACTGAGTCCCTTGAAATTTGTGATTGTCTTTGGTAGTATTCAGGTCAGGCCAAGGGAGTTTTTTTTTCCCTCTTTTATTTATTTATTTATTATTATTATTATTTTTCCATTCCTTCTCTTAGTTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGGTAGGTTAATTTCATATTGCTTTTCTCTCTCTCTCACTGTTTCTTTTTGTTCCCAAGAAGATAACCCAGTTCAGTTCCATCTCATTCTCACTTTCCTCAGCTCCAAAAATGAAACAAAATATGTTATTTTCCCCATATATTTATATTGGAACTAGTGACTCTGTTTTACTCATTGTTAACAAGTGATTGCTTTTCTCATTTGTTGTTTTACTCCTTGTTCTCTTATTGGACTTCTATTTCTGAACGTTGTGGTTGTGTTCTGTTCTAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGATGAAAGAAAAATCATCATCATTTTCCTGATTATTAGGAATGAAAAAAGAAAACCCTTTATTTTTCTACCTTTTTGTTGGAAGTAAAATCTTCTGTGAGTTGAGTTTATGGATGAAAACTAGAGAAATATCAGGAGAGATTTGAGAAGAACTGTTTGTTTGTGTGTGTGTGTGTTTTTTTTTTCCTTTTTGGGTCAGCATGATCTGACATTTTGGTTGTTGCATTTGAGTTTTG

mRNA sequence

ATGAAATTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGATGAAAGAAAAATCATCATCATTTTCCTGATTATTAGGAATGAAAAAAGAAAACCCTTTATTTTTCTACCTTTTTGTTGGAAGTAAAATCTTCTGTGAGTTGAGTTTATGGATGAAAACTAGAGAAATATCAGGAGAGATTTGAGAAGAACTGTTTGTTTGTGTGTGTGTGTGTTTTTTTTTTCCTTTTTGGGTCAGCATGATCTGACATTTTGGTTGTTGCATTTGAGTTTTG

Coding sequence (CDS)

ATGAAATTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGA

Protein sequence

MKFVTVTFGTLHLTLHLTHFQEEKKKKNLIKIPEKAQFLLKSAQTGRSTRMAGSNTRGSNGFHGKSIKDEDFDEEETWGFVSEIKEEETSTPMSTEFNQFKSSGSSSFSSSSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Homology
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A0A0KN13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513750 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 8.0e-84
Identity = 171/197 (86.80%), Postives = 178/197 (90.36%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSFS 110
           MAGSNT  SNGFHGKSIKDEDFDEE+TWG F SE KE+E   PMST+ N FKSS SSS S
Sbjct: 1   MAGSNTSWSNGFHGKSIKDEDFDEEDTWGEFFSERKEKEALIPMSTKLNHFKSSSSSSSS 60

Query: 111 SSSS---SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSW 170
           SSSS   SAWRMQINS PKMIPKAKT+ANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSW
Sbjct: 61  SSSSSSASAWRMQINSVPKMIPKAKTSANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSW 120

Query: 171 INDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGR 230
           INDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGR
Sbjct: 121 INDEYGLVSDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGR 180

Query: 231 DLSKVRNAILTKTGFLE 243
           DLSKVRNAILTKTGFLE
Sbjct: 181 DLSKVRNAILTKTGFLE 197

BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A1S4DT69 (uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 170/197 (86.29%), Postives = 179/197 (90.86%), Query Frame = 0

Query: 50  RMAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSF 109
           +MAGSNT  SNGFHGKSIKDEDFDEE+ WG FVSE KE+E   PMST+ N FKSS SSS 
Sbjct: 2   KMAGSNTSWSNGFHGKSIKDEDFDEEDAWGEFVSERKEKEALIPMSTKLNHFKSSSSSSS 61

Query: 110 SSSSS--SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSW 169
           SSSSS  SAWRMQI+S PKMIPKAKTTANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSW
Sbjct: 62  SSSSSSASAWRMQISSVPKMIPKAKTTANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSW 121

Query: 170 INDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGR 229
           INDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGR
Sbjct: 122 INDEYGLVNDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGR 181

Query: 230 DLSKVRNAILTKTGFLE 243
           DLSK+RNAILTKTGFLE
Sbjct: 182 DLSKLRNAILTKTGFLE 198

BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A1S3B0T6 (uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.8e-83
Identity = 170/196 (86.73%), Postives = 178/196 (90.82%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSFS 110
           MAGSNT  SNGFHGKSIKDEDFDEE+ WG FVSE KE+E   PMST+ N FKSS SSS S
Sbjct: 1   MAGSNTSWSNGFHGKSIKDEDFDEEDAWGEFVSERKEKEALIPMSTKLNHFKSSSSSSSS 60

Query: 111 SSSS--SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWI 170
           SSSS  SAWRMQI+S PKMIPKAKTTANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSWI
Sbjct: 61  SSSSSASAWRMQISSVPKMIPKAKTTANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSWI 120

Query: 171 NDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRD 230
           NDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGRD
Sbjct: 121 NDEYGLVNDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGRD 180

Query: 231 LSKVRNAILTKTGFLE 243
           LSK+RNAILTKTGFLE
Sbjct: 181 LSKLRNAILTKTGFLE 196

BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A5D3CRL7 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006480 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83
Identity = 170/198 (85.86%), Postives = 178/198 (89.90%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSFS 110
           MAGSNT  SNGFHGKSIKDEDFDEE+ WG FVSE KE+E   PMST+ N FKSS SSS S
Sbjct: 1   MAGSNTSWSNGFHGKSIKDEDFDEEDAWGEFVSERKEKEALIPMSTKLNHFKSSSSSSSS 60

Query: 111 SSSS----SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGS 170
           SSSS    SAWRMQI+S PKMIPKAKTTANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GS
Sbjct: 61  SSSSSSSASAWRMQISSVPKMIPKAKTTANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGS 120

Query: 171 WINDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKG 230
           WINDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKG
Sbjct: 121 WINDEYGLVNDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKG 180

Query: 231 RDLSKVRNAILTKTGFLE 243
           RDLSK+RNAILTKTGFLE
Sbjct: 181 RDLSKLRNAILTKTGFLE 198

BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A6J1IRG2 (uncharacterized protein LOC111478694 OS=Cucurbita maxima OX=3661 GN=LOC111478694 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.2e-73
Identity = 154/197 (78.17%), Postives = 170/197 (86.29%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWGFVSEIKEEETSTPMSTEFNQFKSSGSSSFSS 110
           MAGSNTR S+GFHGKSIKDEDFDEE+ WGF SE K+EE S+P++T+F  F SS SSS SS
Sbjct: 1   MAGSNTRWSHGFHGKSIKDEDFDEEQAWGFPSETKKEEASSPVATKFKHFNSSASSS-SS 60

Query: 111 SSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNI-GSWIND 170
           S+SSAW MQI+SAPKMIPKAKTT NQEPKTVKRSSAPLEIPDWSKIYGRNGN+ GSW+++
Sbjct: 61  SNSSAWCMQISSAPKMIPKAKTTPNQEPKTVKRSSAPLEIPDWSKIYGRNGNMGGSWMDE 120

Query: 171 EYGLVDGAACNGFVNDDD----EEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGR 230
            Y         GF+NDDD    EE+DVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGR
Sbjct: 121 GY---------GFINDDDDEEEEEDDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGR 180

Query: 231 DLSKVRNAILTKTGFLE 243
           DLSKVRNAILTKTGFLE
Sbjct: 181 DLSKVRNAILTKTGFLE 187

BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_038881073.1 (uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881074.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881075.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881076.1 uncharacterized protein LOC120072694 [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWGFVSEIKEEETSTPMSTEFNQF---KSSGSSS 110
           MAGSNTR SNGF GKSIKDEDFDEEETWGFVSE KE+E  TPMST+FN      SS SSS
Sbjct: 1   MAGSNTRWSNGFQGKSIKDEDFDEEETWGFVSERKEKEALTPMSTKFNHLSSSSSSSSSS 60

Query: 111 FSSSSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWI 170
            SSSSSSAWRMQI+SAPKMIPKAKTTANQEP TVKRSSAPLEIPDWSKIYGRNGN+GSWI
Sbjct: 61  SSSSSSSAWRMQISSAPKMIPKAKTTANQEPITVKRSSAPLEIPDWSKIYGRNGNMGSWI 120

Query: 171 NDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDL 230
           N+EYG VDGAACNGFVNDDD+EEDV+VPPHEWIARKLARSQISSFSVCEGIGRTLKGRDL
Sbjct: 121 NNEYGFVDGAACNGFVNDDDDEEDVLVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDL 180

Query: 231 SKVRNAILTKTGFLE 243
           SKVRNAILTKTGFLE
Sbjct: 181 SKVRNAILTKTGFLE 195

BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_011658149.1 (uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 3.0e-85
Identity = 174/201 (86.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 47  RSTRMAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGS 106
           +STRMAGSNT  SNGFHGKSIKDEDFDEE+TWG F SE KE+E   PMST+ N FKSS S
Sbjct: 2   KSTRMAGSNTSWSNGFHGKSIKDEDFDEEDTWGEFFSERKEKEALIPMSTKLNHFKSSSS 61

Query: 107 SSFSSSSS---SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGN 166
           SS SSSSS   SAWRMQINS PKMIPKAKT+ANQEPKTVKRSSAPL+IPDWSKIYGRNGN
Sbjct: 62  SSSSSSSSSSASAWRMQINSVPKMIPKAKTSANQEPKTVKRSSAPLDIPDWSKIYGRNGN 121

Query: 167 IGSWINDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRT 226
           +GSWINDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRT
Sbjct: 122 MGSWINDEYGLVSDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRT 181

Query: 227 LKGRDLSKVRNAILTKTGFLE 243
           LKGRDLSKVRNAILTKTGFLE
Sbjct: 182 LKGRDLSKVRNAILTKTGFLE 202

BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_011658151.1 (uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus] >KGN49111.1 hypothetical protein Csa_004432 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-83
Identity = 171/197 (86.80%), Postives = 178/197 (90.36%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSFS 110
           MAGSNT  SNGFHGKSIKDEDFDEE+TWG F SE KE+E   PMST+ N FKSS SSS S
Sbjct: 1   MAGSNTSWSNGFHGKSIKDEDFDEEDTWGEFFSERKEKEALIPMSTKLNHFKSSSSSSSS 60

Query: 111 SSSS---SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSW 170
           SSSS   SAWRMQINS PKMIPKAKT+ANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSW
Sbjct: 61  SSSSSSASAWRMQINSVPKMIPKAKTSANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSW 120

Query: 171 INDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGR 230
           INDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGR
Sbjct: 121 INDEYGLVSDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGR 180

Query: 231 DLSKVRNAILTKTGFLE 243
           DLSKVRNAILTKTGFLE
Sbjct: 181 DLSKVRNAILTKTGFLE 197

BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_016899153.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X1 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 2.2e-83
Identity = 170/197 (86.29%), Postives = 179/197 (90.86%), Query Frame = 0

Query: 50  RMAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSF 109
           +MAGSNT  SNGFHGKSIKDEDFDEE+ WG FVSE KE+E   PMST+ N FKSS SSS 
Sbjct: 2   KMAGSNTSWSNGFHGKSIKDEDFDEEDAWGEFVSERKEKEALIPMSTKLNHFKSSSSSSS 61

Query: 110 SSSSS--SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSW 169
           SSSSS  SAWRMQI+S PKMIPKAKTTANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSW
Sbjct: 62  SSSSSSASAWRMQISSVPKMIPKAKTTANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSW 121

Query: 170 INDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGR 229
           INDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGR
Sbjct: 122 INDEYGLVNDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGR 181

Query: 230 DLSKVRNAILTKTGFLE 243
           DLSK+RNAILTKTGFLE
Sbjct: 182 DLSKLRNAILTKTGFLE 198

BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_008439987.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X2 [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 3.7e-83
Identity = 170/196 (86.73%), Postives = 178/196 (90.82%), Query Frame = 0

Query: 51  MAGSNTRGSNGFHGKSIKDEDFDEEETWG-FVSEIKEEETSTPMSTEFNQFKSSGSSSFS 110
           MAGSNT  SNGFHGKSIKDEDFDEE+ WG FVSE KE+E   PMST+ N FKSS SSS S
Sbjct: 1   MAGSNTSWSNGFHGKSIKDEDFDEEDAWGEFVSERKEKEALIPMSTKLNHFKSSSSSSSS 60

Query: 111 SSSS--SAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWI 170
           SSSS  SAWRMQI+S PKMIPKAKTTANQEPKTVKRSSAPL+IPDWSKIYGRNGN+GSWI
Sbjct: 61  SSSSSASAWRMQISSVPKMIPKAKTTANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSWI 120

Query: 171 NDEYGLV-DGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRD 230
           NDEYGLV D AA NGFVNDDDEEEDVMVPPHEWIARKLAR+QISSFSVCEGIGRTLKGRD
Sbjct: 121 NDEYGLVNDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGRD 180

Query: 231 LSKVRNAILTKTGFLE 243
           LSK+RNAILTKTGFLE
Sbjct: 181 LSKLRNAILTKTGFLE 196

BLAST of Lsi01G004270 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 94/203 (46.31%), Postives = 121/203 (59.61%), Query Frame = 0

Query: 46  GRSTRMAGSNTRGSNGFHGKSIKDEDFDEEETWGFVSEIKEEETSTPMSTEFNQFKSSGS 105
           G   R   S    S G  G    DE+F EE+ W   S ++E ETS+P   E    KS  S
Sbjct: 5   GSRRRTHNSRRVPSMGIEG----DEEFQEEDVW---SVLREGETSSP---EMKIPKSHFS 64

Query: 106 SSFSSSSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYG------R 165
           SS SSSSSS W ++               ++E   VK+SSAP+ +PDWSK+YG      R
Sbjct: 65  SS-SSSSSSPWNIR--------------RSKEVSGVKQSSAPMNVPDWSKVYGDSKSNRR 124

Query: 166 NGNIGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIG 225
           + ++ S   D+              DD++++  MVPPHEW+ARKLAR+QISSFS+CEG+G
Sbjct: 125 SSHLHSHAADD--------------DDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVG 168

Query: 226 RTLKGRDLSKVRNAILTKTGFLE 243
           RTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 185 RTLKGRDLSKVRNAVLSKTGFLE 168

BLAST of Lsi01G004270 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-29
Identity = 82/178 (46.07%), Postives = 107/178 (60.11%), Query Frame = 0

Query: 70  EDFDEEETWGFVSEIKEEETSTPMSTEFNQFKSSGSSSFSSSSSSAWRMQINSAPKMIPK 129
           E+F EEE W   S ++E ET  P      + K S S++  S+SSS       S+ + IPK
Sbjct: 5   EEFQEEEVW---SVLRESETQGP------EMKMSKSNNLFSASSS-------SSARYIPK 64

Query: 130 AKTTANQEPKTVKRSSAPLEIPDWSKIYG-----RNGNIGSWINDEYGLVDGAACNGFVN 189
                N+     K+SSAP+ IPDWSK+YG      + ++ SW                  
Sbjct: 65  ----GNEVSGGAKQSSAPMNIPDWSKVYGYSKKNTSSHLHSWA----------------- 124

Query: 190 DDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 243
            DD++E  MVPPHE +A++LAR+QISSFS+CEGIGRTLKGRDLSK RNA+LT+TGFLE
Sbjct: 125 IDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

BLAST of Lsi01G004270 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 59/144 (40.97%), Postives = 74/144 (51.39%), Query Frame = 0

Query: 99  QFKSSGSSSFSSSSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYG 158
           +F  S   S  S S    R  I S  K  P   TT      T   SS P+ + +WSKI G
Sbjct: 33  EFDESDLYSNRSDSPEFRRKLITSNRKSSPATVTT------TTVASSLPMNVQNWSKILG 92

Query: 159 RNGNIGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGI 218
           +                        NDDD  E   +PPHE+    LA+++++SFSV EGI
Sbjct: 93  KENR-----------------KSIENDDDGGEG-KLPPHEY----LAKTRMASFSVHEGI 148

Query: 219 GRTLKGRDLSKVRNAILTKTGFLE 243
           GRTLKGRD+S+VRNAIL KTGFL+
Sbjct: 153 GRTLKGRDMSRVRNAILEKTGFLD 148

BLAST of Lsi01G004270 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 70/212 (33.02%), Postives = 106/212 (50.00%), Query Frame = 0

Query: 41  KSAQTGRSTRMAGSNTRGSNGFHGKSIKDE-DFDEEETWGFVSEIKEEETSTPMS-TEFN 100
           K     RS R  GS T G +  HG S+ DE +  EE+ W   + I ++ T    S   +N
Sbjct: 6   KPTTMNRSDRYLGSYTYGDS--HGNSVTDELELGEEDIWS-PAVIHDDTTENEESYGTWN 65

Query: 101 QFKSSGSSSFSSSSSSAWRMQI----NSAPKMIPKAKTTA--NQEPKTVKRSSAPLEIPD 160
              + G +      S A+   +    +S+P ++ K        +E +    SSAP+ +PD
Sbjct: 66  LRATLGKNGRVGGLSLAFEGSLVAPPSSSPMIVQKIHGGGGEGEEDRRKLASSAPVNVPD 125

Query: 161 WSKIYGRNGNIGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQI--- 220
           WSKIY  +      +   + L D         DD++EE  M+PPHE++A+  AR      
Sbjct: 126 WSKIYRVDS-----VESIHELDD--------EDDEDEESGMMPPHEYLAKSQARRSRKIG 185

Query: 221 -SSFSVCEGIGRTLKGRDLSKVRNAILTKTGF 241
               SV +G+GRTLKGR+L +VR+AI ++TGF
Sbjct: 186 GGGASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

BLAST of Lsi01G004270 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13
Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 0

Query: 80  FVSEIKEEETSTPMSTEFNQFKSSGSSS--FSSSSSSAWRMQINSAPKMIPKAKT--TAN 139
           ++S +   + +  +ST  +   SS SSS   +S+ SS+    I +APK  P+ +   +A+
Sbjct: 89  YLSHVFHHKPAAALSTSVSSTASSSSSSGGGASAGSSSSARAIPTAPKP-PQERLPFSAS 148

Query: 140 QEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWINDEYGLVDGAACNGFVNDDDEEED-VMV 199
                    SAP+++P  S               E+ L D       V+DD+EEE+  M+
Sbjct: 149 FVGGGKYPQSAPVQVPLVSSAMMNRH------KKEFKLTD------VVDDDEEEEEGEML 208

Query: 200 PPHEWIARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE 243
           PPHE +AR LA+S + S SV EG GRTLKGRDL +VRNA+  +TGF++
Sbjct: 209 PPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KN138.0e-8486.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513750 PE=4 SV=1[more]
A0A1S4DT691.0e-8386.29uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0T61.8e-8386.73uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CRL73.1e-8385.86Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1IRG22.2e-7378.17uncharacterized protein LOC111478694 OS=Cucurbita maxima OX=3661 GN=LOC111478694... [more]
Match NameE-valueIdentityDescription
XP_038881073.11.4e-8788.72uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881074.1 unchara... [more]
XP_011658149.13.0e-8586.57uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus][more]
XP_011658151.11.7e-8386.80uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus] >KGN49111.1 hy... [more]
XP_016899153.12.2e-8386.29PREDICTED: uncharacterized protein LOC103484610 isoform X1 [Cucumis melo][more]
XP_008439987.13.7e-8386.73PREDICTED: uncharacterized protein LOC103484610 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT4G04630.11.4e-3246.31Protein of unknown function, DUF584 [more]
AT4G21970.17.3e-2946.07Protein of unknown function, DUF584 [more]
AT3G45210.11.0e-1440.97Protein of unknown function, DUF584 [more]
AT1G61930.11.9e-1333.02Protein of unknown function, DUF584 [more]
AT3G15040.15.6e-1336.90Protein of unknown function, DUF584 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 70..242
e-value: 2.0E-41
score: 142.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..111
NoneNo IPR availablePANTHERPTHR33083EXPRESSED PROTEINcoord: 62..242
NoneNo IPR availablePANTHERPTHR33083:SF55OS07G0512250 PROTEINcoord: 62..242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G004270.1Lsi01G004270.1mRNA