Lsi01G004270 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTACAATTCATCTGCTTTTTATTATCTTTTTTGGGGTTTCCCTATTCTTGCTGGTTGCCATTTCTGAGCCTGAACTGAGTCCCTTGAAATTTGTGATTGTCTTTGGTAGTATTCAGGTCAGGCCAAGGGAGTTTTTTTTTCCCTCTTTTATTTATTTATTTATTATTATTATTATTTTTCCATTCCTTCTCTTAGTTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGGTAGGTTAATTTCATATTGCTTTTCTCTCTCTCTCACTGTTTCTTTTTGTTCCCAAGAAGATAACCCAGTTCAGTTCCATCTCATTCTCACTTTCCTCAGCTCCAAAAATGAAACAAAATATGTTATTTTCCCCATATATTTATATTGGAACTAGTGACTCTGTTTTACTCATTGTTAACAAGTGATTGCTTTTCTCATTTGTTGTTTTACTCCTTGTTCTCTTATTGGACTTCTATTTCTGAACGTTGTGGTTGTGTTCTGTTCTAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGATGAAAGAAAAATCATCATCATTTTCCTGATTATTAGGAATGAAAAAAGAAAACCCTTTATTTTTCTACCTTTTTGTTGGAAGTAAAATCTTCTGTGAGTTGAGTTTATGGATGAAAACTAGAGAAATATCAGGAGAGATTTGAGAAGAACTGTTTGTTTGTGTGTGTGTGTGTTTTTTTTTTCCTTTTTGGGTCAGCATGATCTGACATTTTGGTTGTTGCATTTGAGTTTTG ATGAAATTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGATGAAAGAAAAATCATCATCATTTTCCTGATTATTAGGAATGAAAAAAGAAAACCCTTTATTTTTCTACCTTTTTGTTGGAAGTAAAATCTTCTGTGAGTTGAGTTTATGGATGAAAACTAGAGAAATATCAGGAGAGATTTGAGAAGAACTGTTTGTTTGTGTGTGTGTGTGTTTTTTTTTTCCTTTTTGGGTCAGCATGATCTGACATTTTGGTTGTTGCATTTGAGTTTTG ATGAAATTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGGAAGAAAAAAAAAAGAAAAATCTGATAAAAATCCCTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGATCAACCAGAATGGCAGGTTCCAACACCAGAGGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAGAAACGTGGGGATTTGTCAGTGAAATAAAAGAAGAAGAAACTTCTACTCCAATGTCAACAGAATTCAACCAGTTCAAGTCATCAGGCTCTTCTTCTTTTTCTTCTTCTTCTTCCTCTGCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATCGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTCTGACTAAAACTGGTTTTTTGGAGTGA MKFVTVTFGTLHLTLHLTHFQEEKKKKNLIKIPEKAQFLLKSAQTGRSTRMAGSNTRGSNGFHGKSIKDEDFDEEETWGFVSEIKEEETSTPMSTEFNQFKSSGSSSFSSSSSSAWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNIGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE Homology
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A0A0KN13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513750 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 8.0e-84 Identity = 171/197 (86.80%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A1S4DT69 (uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83 Identity = 170/197 (86.29%), Postives = 179/197 (90.86%), Query Frame = 0
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A1S3B0T6 (uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.8e-83 Identity = 170/196 (86.73%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A5D3CRL7 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006480 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83 Identity = 170/198 (85.86%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of Lsi01G004270 vs. ExPASy TrEMBL
Match: A0A6J1IRG2 (uncharacterized protein LOC111478694 OS=Cucurbita maxima OX=3661 GN=LOC111478694 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 2.2e-73 Identity = 154/197 (78.17%), Postives = 170/197 (86.29%), Query Frame = 0
BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_038881073.1 (uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881074.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881075.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881076.1 uncharacterized protein LOC120072694 [Benincasa hispida]) HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87 Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 0
BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_011658149.1 (uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 3.0e-85 Identity = 174/201 (86.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_011658151.1 (uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus] >KGN49111.1 hypothetical protein Csa_004432 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 1.7e-83 Identity = 171/197 (86.80%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_016899153.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X1 [Cucumis melo]) HSP 1 Score: 319.7 bits (818), Expect = 2.2e-83 Identity = 170/197 (86.29%), Postives = 179/197 (90.86%), Query Frame = 0
BLAST of Lsi01G004270 vs. NCBI nr
Match: XP_008439987.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X2 [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 3.7e-83 Identity = 170/196 (86.73%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Lsi01G004270 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32 Identity = 94/203 (46.31%), Postives = 121/203 (59.61%), Query Frame = 0
BLAST of Lsi01G004270 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 125.2 bits (313), Expect = 7.3e-29 Identity = 82/178 (46.07%), Postives = 107/178 (60.11%), Query Frame = 0
BLAST of Lsi01G004270 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14 Identity = 59/144 (40.97%), Postives = 74/144 (51.39%), Query Frame = 0
BLAST of Lsi01G004270 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13 Identity = 70/212 (33.02%), Postives = 106/212 (50.00%), Query Frame = 0
BLAST of Lsi01G004270 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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