Lsi01G004260 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G004260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP synthase gamma chain
Location	chr01: 3608956 .. 3610071 (+)
RNA-Seq Expression	Lsi01G004260
Synteny	Lsi01G004260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGCTCAAACTTGACAATGTGGGTATCCTCAAAACCGTCTTCTTCCGATGCTTCCGCTCTTTGTTTTCGGCCTTTCAATCCTCTTCAAGTTCCTTCTCAAGGCTCTGCCGCGCGATCCTCATCTGTCACTCCGATTCAGTGCGGCCTCCGTGAGCTTCGAGAACGGATTGATTCAGTGAAGAACACCCAGAAAATTACCGAGGCTATGAAGCTTGTTGCTGCTGCCAAAGTGCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCATTCTCGGAGTCTCTAGTTGAAGTTCTTTACAATATCAACGAGCAGCTCCAAACCGAAGATATAGATGTACCTCTGACAAAAGTTCGACCAGTCAAGAAGGTTGCTTTGATTGTTGTAACAGGGGATCGAGGCCTCTGCGGCAGTTTCAATAACATGATCATCAAAAAGGCAGAGTCCAGGATCGCAGAATTGAAGACCCTTGGTCTTGATTATACAGTTATTAGCGTGGGCAAGAAGGGGAATTCGTATTTCCTTCGCCGGCCTTACATCCCAGTAGATAGATTTCTTGAGGGTGGTTCACTTCCGACAGCTAAAGAAGCTCAAGCCATTGCAGACGATGTTTTTTCCCTCTTTATTAGCGAAGAGGTCGACAAAGTCGAGCTTCTGTACACCAAATTCGTGTCATTAGTTAAATCGGACCCTGTGATCCACACTCTGCTTCCATTATCACCTAAAGGAGAGATTTGTGATATAAATGGTGTTTGTGTTGATGCCGCAGAGGACGAATTCTTCAGATTGACGACAAAAGAAGGAAAATTGACCGTAGAGAGAGATGCCGTGAGGACAAAAACCTCAGATTTCTCCCCAATTTTACAGTTTGAGCAGGACCCAGCTCAGATTCTTGATGCTTTATTACCTCTCTATTTGAACAGTCAAATTTTGAGGTCATTGCAGGAATCATTAGCAAGTGAACTTGCGGCCAGAATGAGCGCCATGAGCAATGCAACTGATAATGCAAGCGAGTTGAAGAAGACACTCTCTATTGTTTACAACAGACAGCGGCAAGCTAAAATCACTGGCGAGATTTTGGAGATTGTTGCTGGTGCCAACGCTTTGACTTGA

mRNA sequence

ATGGCTTGCTCAAACTTGACAATGTGGGTATCCTCAAAACCGTCTTCTTCCGATGCTTCCGCTCTTTGTTTTCGGCCTTTCAATCCTCTTCAAGTTCCTTCTCAAGGCTCTGCCGCGCGATCCTCATCTGTCACTCCGATTCAGTGCGGCCTCCGTGAGCTTCGAGAACGGATTGATTCAGTGAAGAACACCCAGAAAATTACCGAGGCTATGAAGCTTGTTGCTGCTGCCAAAGTGCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCATTCTCGGAGTCTCTAGTTGAAGTTCTTTACAATATCAACGAGCAGCTCCAAACCGAAGATATAGATGTACCTCTGACAAAAGTTCGACCAGTCAAGAAGGTTGCTTTGATTGTTGTAACAGGGGATCGAGGCCTCTGCGGCAGTTTCAATAACATGATCATCAAAAAGGCAGAGTCCAGGATCGCAGAATTGAAGACCCTTGGTCTTGATTATACAGTTATTAGCGTGGGCAAGAAGGGGAATTCGTATTTCCTTCGCCGGCCTTACATCCCAGTAGATAGATTTCTTGAGGGTGGTTCACTTCCGACAGCTAAAGAAGCTCAAGCCATTGCAGACGATGTTTTTTCCCTCTTTATTAGCGAAGAGGTCGACAAAGTCGAGCTTCTGTACACCAAATTCGTGTCATTAGTTAAATCGGACCCTGTGATCCACACTCTGCTTCCATTATCACCTAAAGGAGAGATTTGTGATATAAATGGTGTTTGTGTTGATGCCGCAGAGGACGAATTCTTCAGATTGACGACAAAAGAAGGAAAATTGACCGTAGAGAGAGATGCCGTGAGGACAAAAACCTCAGATTTCTCCCCAATTTTACAGTTTGAGCAGGACCCAGCTCAGATTCTTGATGCTTTATTACCTCTCTATTTGAACAGTCAAATTTTGAGGTCATTGCAGGAATCATTAGCAAGTGAACTTGCGGCCAGAATGAGCGCCATGAGCAATGCAACTGATAATGCAAGCGAGTTGAAGAAGACACTCTCTATTGTTTACAACAGACAGCGGCAAGCTAAAATCACTGGCGAGATTTTGGAGATTGTTGCTGGTGCCAACGCTTTGACTTGA

Coding sequence (CDS)

ATGGCTTGCTCAAACTTGACAATGTGGGTATCCTCAAAACCGTCTTCTTCCGATGCTTCCGCTCTTTGTTTTCGGCCTTTCAATCCTCTTCAAGTTCCTTCTCAAGGCTCTGCCGCGCGATCCTCATCTGTCACTCCGATTCAGTGCGGCCTCCGTGAGCTTCGAGAACGGATTGATTCAGTGAAGAACACCCAGAAAATTACCGAGGCTATGAAGCTTGTTGCTGCTGCCAAAGTGCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCATTCTCGGAGTCTCTAGTTGAAGTTCTTTACAATATCAACGAGCAGCTCCAAACCGAAGATATAGATGTACCTCTGACAAAAGTTCGACCAGTCAAGAAGGTTGCTTTGATTGTTGTAACAGGGGATCGAGGCCTCTGCGGCAGTTTCAATAACATGATCATCAAAAAGGCAGAGTCCAGGATCGCAGAATTGAAGACCCTTGGTCTTGATTATACAGTTATTAGCGTGGGCAAGAAGGGGAATTCGTATTTCCTTCGCCGGCCTTACATCCCAGTAGATAGATTTCTTGAGGGTGGTTCACTTCCGACAGCTAAAGAAGCTCAAGCCATTGCAGACGATGTTTTTTCCCTCTTTATTAGCGAAGAGGTCGACAAAGTCGAGCTTCTGTACACCAAATTCGTGTCATTAGTTAAATCGGACCCTGTGATCCACACTCTGCTTCCATTATCACCTAAAGGAGAGATTTGTGATATAAATGGTGTTTGTGTTGATGCCGCAGAGGACGAATTCTTCAGATTGACGACAAAAGAAGGAAAATTGACCGTAGAGAGAGATGCCGTGAGGACAAAAACCTCAGATTTCTCCCCAATTTTACAGTTTGAGCAGGACCCAGCTCAGATTCTTGATGCTTTATTACCTCTCTATTTGAACAGTCAAATTTTGAGGTCATTGCAGGAATCATTAGCAAGTGAACTTGCGGCCAGAATGAGCGCCATGAGCAATGCAACTGATAATGCAAGCGAGTTGAAGAAGACACTCTCTATTGTTTACAACAGACAGCGGCAAGCTAAAATCACTGGCGAGATTTTGGAGATTGTTGCTGGTGCCAACGCTTTGACTTGA

Protein sequence

MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGANALT

Homology

[Close]

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot
Match: P29790 (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=1 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 3.4e-171
Identity = 316/376 (84.04%), Postives = 348/376 (92.55%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFR-PFNPLQVPSQGSA-----ARSSSVTPIQCGLREL 60
           M+CSNLTM VSSKPS SD+SAL FR   +P Q+P+  ++     +RSSSVTP+ CGLR+L
Sbjct: 1   MSCSNLTMLVSSKPSLSDSSALSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDL 60

Query: 61  RERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDV 120
           R+RI+SVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSE+LVEVLYNINEQLQT+DIDV
Sbjct: 61  RDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV 120

Query: 121 PLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSY 180
           PLTKVRPVKKVAL+VVTGDRGLCG FNN +IKKAE+RI +LK LG+DYT+ISVGKKGNSY
Sbjct: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSY 180

Query: 181 FLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVI 240
           F+RRPYIPVD+FLEG +LPTAK+AQAIADDVFSLF+SEEVDKVELLYTKFVSLVKS+PVI
Sbjct: 181 FIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVI 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQD 300
           HTLLPLSPKGEICDING CVDAA DEFFRLTTKEGKLTVERD +RTKT+DFSPILQFEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAANDEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQD 300

Query: 301 PAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQA 360
           P QILDALLPLYLNSQILR+LQESLASELAARMSAMS+ATDNA+ELKK LS VYNRQRQA
Sbjct: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQA 360

Query: 361 KITGEILEIVAGANAL 371
           KITGEILEIVAGA+AL
Sbjct: 361 KITGEILEIVAGADAL 376

[Close]

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot
Match: Q01908 (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 1.8e-169
Identity = 315/371 (84.91%), Postives = 344/371 (92.72%), Query Frame = 0


Query: 1   MACSNL-TMWVSSKPS-SSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERI 60
           MACSNL TMWVSSKPS S+D+S+L FR        +    +R+SSV+P+Q  LRELR+RI
Sbjct: 1   MACSNLTTMWVSSKPSLSADSSSLSFRSVLKCPTNTSSPPSRASSVSPLQASLRELRDRI 60

Query: 61  DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTK 120
           DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+LVEVLYNINEQLQT+D+DVPLTK
Sbjct: 61  DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTK 120

Query: 121 VRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRR 180
           VRPVKKVAL+VVTGDRGLCG FNN IIKKAE+RI ELK LGL+YTVISVGKKGNSYFLRR
Sbjct: 121 VRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRR 180

Query: 181 PYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLL 240
           PYIPVD++LE G+LPTAKEAQA+ADDVFSLFISEEVDKVELLYTKFVSLVKS+PVIHTLL
Sbjct: 181 PYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLL 240

Query: 241 PLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQI 300
           PLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVER+  RT T+DFSPILQFEQDP QI
Sbjct: 241 PLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQI 300

Query: 301 LDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITG 360
           LDALLPLYLNSQILR+LQESLASELAARMSAMS+A+DNAS+LKK+LS+VYNR+RQAKITG
Sbjct: 301 LDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITG 360

Query: 361 EILEIVAGANA 370
           EILEIVAGANA
Sbjct: 361 EILEIVAGANA 371

[Close]

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot
Match: P28552 (ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 8.9e-164
Identity = 310/372 (83.33%), Postives = 334/372 (89.78%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFR-PFNPLQVPSQGSAARSSSVTP-----IQCGLREL 60
           M+CSN+TM VSSKPS  DAS L FR  FNP Q+PSQ S   SSS TP     IQCGL++L
Sbjct: 1   MSCSNVTMLVSSKPSLPDASNLSFRSAFNPFQLPSQNS---SSSCTPSRPTSIQCGLKDL 60

Query: 61  RERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDV 120
           + RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+LVEVLY+INEQLQT+DI+ 
Sbjct: 61  KNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTDDIES 120

Query: 121 PLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSY 180
           PLTK+RPVKKVAL+V TGDRGLCG FNN I+KKAE+RIAELK LGL+YTV+SVG+KGNSY
Sbjct: 121 PLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLEYTVVSVGRKGNSY 180

Query: 181 FLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVI 240
           F RRPYIPVDRFLEGGSLPTAKEAQ IADDVFSLF+SEEVDKVELLYTKFVSLVKS+P+I
Sbjct: 181 FNRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPII 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQD 300
           HTLLPLSPKGEICDING CVDAAEDE FRLTTKEGKLTVERD +R+KT DFSPILQFEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQD 300

Query: 301 PAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQA 360
           P QILDALLPLYLNSQILR LQESLASELAARMSAMS+A DNASELK  L+ VYNR  QA
Sbjct: 301 PVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQA 360

Query: 361 KITGEILEIVAG 367
           KITGEILEIVAG
Sbjct: 361 KITGEILEIVAG 369

[Close]

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot
Match: P05435 (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPC PE=1 SV=2)

HSP 1 Score: 548.9 bits (1413), Expect = 4.4e-155
Identity = 285/334 (85.33%), Postives = 312/334 (93.41%), Query Frame = 0


Query: 37  SAARSSSVTPIQC-GLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSES 96
           +A    +  PIQC  LRELR+RI SVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+
Sbjct: 29  NATTLPTTNPIQCANLRELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSET 88

Query: 97  LVEVLYNINEQLQTEDIDVPLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAEL 156
           LVEVLYN+NEQLQTED+DVPLTK+R VKKVAL+VVTGDRGLCG FNNM++KKAESRIAEL
Sbjct: 89  LVEVLYNMNEQLQTEDVDVPLTKIRTVKKVALMVVTGDRGLCGGFNNMLLKKAESRIAEL 148

Query: 157 KTLGLDYTVISVGKKGNSYFLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVD 216
           K LG+DYT+IS+GKKGN+YF+RRP IPVDR+ +G +LPTAKEAQAIADDVFSLF+SEEVD
Sbjct: 149 KKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFDGTNLPTAKEAQAIADDVFSLFVSEEVD 208

Query: 217 KVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVER 276
           KVE+LYTKFVSLVKSDPVIHTLLPLSPKGEICDING CVDAAEDE FRLTTKEGKLTVER
Sbjct: 209 KVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGKCVDAAEDELFRLTTKEGKLTVER 268

Query: 277 DAVRTKTSDFSPILQFEQDPAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATD 336
           D ++T+T  FSPIL+FEQDPAQILDALLPLYLNSQILR+LQESLASELAARM+AMSNATD
Sbjct: 269 DMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAMSNATD 328

Query: 337 NASELKKTLSIVYNRQRQAKITGEILEIVAGANA 370
           NA+ELKKTLSI YNR RQAKITGEILEIVAGANA
Sbjct: 329 NANELKKTLSINYNRARQAKITGEILEIVAGANA 362

[Close]

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot
Match: P0C1M0 (ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.7e-143
Identity = 271/371 (73.05%), Postives = 318/371 (85.71%), Query Frame = 0


Query: 1   MACSNL-TMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERID 60
           M+CS+L T W SS  +SS ++              + S  RS  +  ++C LRELR RID
Sbjct: 1   MSCSHLSTAWSSSALASSASTT------------RRRSPPRSGLL--VRCSLRELRTRID 60

Query: 61  SVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKV 120
           SV+NTQKITEAMKLVAAAKVRRAQEAVV+ RPFSE+LVEVLYN+N+++QTEDID+PLT+ 
Sbjct: 61  SVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLPLTRT 120

Query: 121 RPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRP 180
           RPVKKVAL+V+TG+RGLCGSFNN ++KKAE+RI ELK LGL YTV+SVGKKGN+YF RRP
Sbjct: 121 RPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYFQRRP 180

Query: 181 YIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLP 240
           YIP++R LE  S+PT K++QAI D V+SLF+SEEVDKVELLY+KFVSLV+SDP+I TLLP
Sbjct: 181 YIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLP 240

Query: 241 LSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQIL 300
           +SPKGEICD+NGVCVDA EDE FRLTTKEGKLTVER+ V+ +T  FSP++QFEQDP QIL
Sbjct: 241 MSPKGEICDVNGVCVDATEDELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQIL 300

Query: 301 DALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGE 360
           DALLPLYLNSQILR+LQESLASELAARMSAMS+ATDNA EL+K LSI YNRQRQAKITGE
Sbjct: 301 DALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGE 357

Query: 361 ILEIVAGANAL 371
           ILEIVAGA+AL
Sbjct: 361 ILEIVAGADAL 357

[Close]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL
Match: A0A1S3B017 (ATP synthase gamma chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484608 PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 8.5e-194
Identity = 363/371 (97.84%), Postives = 366/371 (98.65%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSNL MWVSSKPSSSD+SAL FRP NPLQVPSQGSA+RSSSV+PIQCGLRELRERIDS
Sbjct: 1   MACSNLAMWVSSKPSSSDSSALSFRPVNPLQVPSQGSASRSSSVSPIQCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYF RRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFSRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL
Match: A0A0A0KL78 (ATP synthase gamma chain OS=Cucumis sativus OX=3659 GN=Csa_6G513760 PE=3 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.2e-191
Identity = 356/371 (95.96%), Postives = 362/371 (97.57%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACS L MWVSSKPSSSD+SAL FRP NP +VPS GSA+RSSSVTPIQCGLRELRERIDS
Sbjct: 1   MACSKLAMWVSSKPSSSDSSALSFRPVNPFRVPSHGSASRSSSVTPIQCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCG FNNMIIKKAESRIAELKTLGLDYT+ISVGKKGNSYF RRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGGFNNMIIKKAESRIAELKTLGLDYTIISVGKKGNSYFFRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKS+PVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSNPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEI+AGANALT
Sbjct: 361 LEIIAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL
Match: A0A5D3CM68 (ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006490 PE=3 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.0e-190
Identity = 357/364 (98.08%), Postives = 360/364 (98.90%), Query Frame = 0


Query: 8   MWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDSVKNTQKI 67
           MWVSSKPSSSD+SAL FRP NPLQVPSQGSA+RSSSV+PIQCGLRELRERIDSVKNTQKI
Sbjct: 1   MWVSSKPSSSDSSALSFRPVNPLQVPSQGSASRSSSVSPIQCGLRELRERIDSVKNTQKI 60

Query: 68  TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL 127
           TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL
Sbjct: 61  TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL 120

Query: 128 IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPYIPVDRFL 187
           IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYF RRPYIPVDRFL
Sbjct: 121 IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFSRRPYIPVDRFL 180

Query: 188 EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC 247
           EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC
Sbjct: 181 EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC 240

Query: 248 DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILDALLPLYL 307
           DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILDALLPLYL
Sbjct: 241 DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILDALLPLYL 300

Query: 308 NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA 367
           NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA
Sbjct: 301 NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA 360

Query: 368 NALT 372
           NALT
Sbjct: 361 NALT 364

[Close]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL
Match: A0A6J1GF38 (ATP synthase gamma chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453360 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.7e-189
Identity = 356/371 (95.96%), Postives = 360/371 (97.04%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSN TMWVSSK SSSD SAL FR FNPLQVP QGSA+RSSSVTPI CGLRELRERIDS
Sbjct: 1   MACSNFTMWVSSKSSSSDDSALSFRHFNPLQVPLQGSASRSSSVTPIHCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLT VR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTNVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKG+ICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGDICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESL SELAARMSAMS+ATDNASE KKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLGSELAARMSAMSSATDNASESKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL
Match: A0A6J1IV72 (ATP synthase gamma chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478692 PE=3 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.7e-189
Identity = 356/371 (95.96%), Postives = 360/371 (97.04%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSN TMWV SK SSSDASAL FR FNPLQVP QGSA+RSSSVTPI CGLRELRERIDS
Sbjct: 1   MACSNFTMWVYSKSSSSDASALSFRHFNPLQVPLQGSASRSSSVTPIHCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLT VR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTNVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLG+DYTVISVGKKGNSYFLRRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGVDYTVISVGKKGNSYFLRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDIN VCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDF PILQFEQDP QILD
Sbjct: 241 SPKGEICDINRVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFPPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMS+ATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSSATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. NCBI nr
Match: XP_038881980.1 (ATP synthase gamma chain, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 691.8 bits (1784), Expect = 3.2e-195
Identity = 366/371 (98.65%), Postives = 367/371 (98.92%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSNLTMWVSSKPSSSDAS L FRPFNPLQVPSQGSA+RS SVTPIQCGLRELRERIDS
Sbjct: 1   MACSNLTMWVSSKPSSSDASVLSFRPFNPLQVPSQGSASRSLSVTPIQCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. NCBI nr
Match: XP_008439983.1 (PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo])

HSP 1 Score: 686.0 bits (1769), Expect = 1.8e-193
Identity = 363/371 (97.84%), Postives = 366/371 (98.65%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSNL MWVSSKPSSSD+SAL FRP NPLQVPSQGSA+RSSSV+PIQCGLRELRERIDS
Sbjct: 1   MACSNLAMWVSSKPSSSDSSALSFRPVNPLQVPSQGSASRSSSVSPIQCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYF RRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFSRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. NCBI nr
Match: XP_004134761.1 (ATP synthase gamma chain, chloroplastic [Cucumis sativus] >KGN49112.1 hypothetical protein Csa_003475 [Cucumis sativus])

HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190
Identity = 356/371 (95.96%), Postives = 362/371 (97.57%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACS L MWVSSKPSSSD+SAL FRP NP +VPS GSA+RSSSVTPIQCGLRELRERIDS
Sbjct: 1   MACSKLAMWVSSKPSSSDSSALSFRPVNPFRVPSHGSASRSSSVTPIQCGLRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCG FNNMIIKKAESRIAELKTLGLDYT+ISVGKKGNSYF RRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGGFNNMIIKKAESRIAELKTLGLDYTIISVGKKGNSYFFRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKS+PVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSNPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEI+AGANALT
Sbjct: 361 LEIIAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. NCBI nr
Match: TYK13047.1 (ATP synthase gamma chain [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 4.1e-190
Identity = 357/364 (98.08%), Postives = 360/364 (98.90%), Query Frame = 0


Query: 8   MWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDSVKNTQKI 67
           MWVSSKPSSSD+SAL FRP NPLQVPSQGSA+RSSSV+PIQCGLRELRERIDSVKNTQKI
Sbjct: 1   MWVSSKPSSSDSSALSFRPVNPLQVPSQGSASRSSSVSPIQCGLRELRERIDSVKNTQKI 60

Query: 68  TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL 127
           TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL
Sbjct: 61  TEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVAL 120

Query: 128 IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPYIPVDRFL 187
           IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYF RRPYIPVDRFL
Sbjct: 121 IVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFSRRPYIPVDRFL 180

Query: 188 EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC 247
           EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC
Sbjct: 181 EGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEIC 240

Query: 248 DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILDALLPLYL 307
           DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDP QILDALLPLYL
Sbjct: 241 DINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILDALLPLYL 300

Query: 308 NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA 367
           NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA
Sbjct: 301 NSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEILEIVAGA 360

Query: 368 NALT 372
           NALT
Sbjct: 361 NALT 364

[Close]

BLAST of Lsi01G004260 vs. NCBI nr
Match: XP_023543714.1 (ATP synthase gamma chain, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023543715.1 ATP synthase gamma chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.2 bits (1733), Expect = 2.6e-189
Identity = 356/371 (95.96%), Postives = 361/371 (97.30%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERIDS 60
           MACSN TMWVSSK SSSDASAL FR FNPLQVP QGSA+RSSSVTPI C LRELRERIDS
Sbjct: 1   MACSNFTMWVSSKSSSSDASALSFRHFNPLQVPLQGSASRSSSVTPIHCALRELRERIDS 60

Query: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVR 120
           VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLT VR
Sbjct: 61  VKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTNVR 120

Query: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPY 180
           PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLG+DYTVISVGKKGNSYFLRRPY
Sbjct: 121 PVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGVDYTVISVGKKGNSYFLRRPY 180

Query: 181 IPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240
           IPVDRFLEGGSL TAKEAQAIADDVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPL
Sbjct: 181 IPVDRFLEGGSLSTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPL 240

Query: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQILD 300
           SPKGEICDINGVCVDAAEDEFFRLTTKEGKLT+ERDAVRTKTSDFSPILQFEQDP QILD
Sbjct: 241 SPKGEICDINGVCVDAAEDEFFRLTTKEGKLTIERDAVRTKTSDFSPILQFEQDPVQILD 300

Query: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITGEI 360
           ALLPLYLNSQILRSLQESLASELAARMSAMS+ATDNASELKKTLSIVYNRQRQAKITGEI
Sbjct: 301 ALLPLYLNSQILRSLQESLASELAARMSAMSSATDNASELKKTLSIVYNRQRQAKITGEI 360

Query: 361 LEIVAGANALT 372
           LEIVAGANALT
Sbjct: 361 LEIVAGANALT 371

[Close]

BLAST of Lsi01G004260 vs. TAIR 10
Match: AT4G04640.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 596.7 bits (1537), Expect = 1.3e-170
Identity = 315/371 (84.91%), Postives = 344/371 (92.72%), Query Frame = 0


Query: 1   MACSNL-TMWVSSKPS-SSDASALCFRPFNPLQVPSQGSAARSSSVTPIQCGLRELRERI 60
           MACSNL TMWVSSKPS S+D+S+L FR        +    +R+SSV+P+Q  LRELR+RI
Sbjct: 1   MACSNLTTMWVSSKPSLSADSSSLSFRSVLKCPTNTSSPPSRASSVSPLQASLRELRDRI 60

Query: 61  DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTK 120
           DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+LVEVLYNINEQLQT+D+DVPLTK
Sbjct: 61  DSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTK 120

Query: 121 VRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRR 180
           VRPVKKVAL+VVTGDRGLCG FNN IIKKAE+RI ELK LGL+YTVISVGKKGNSYFLRR
Sbjct: 121 VRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRR 180

Query: 181 PYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLL 240
           PYIPVD++LE G+LPTAKEAQA+ADDVFSLFISEEVDKVELLYTKFVSLVKS+PVIHTLL
Sbjct: 181 PYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLL 240

Query: 241 PLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPAQI 300
           PLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVER+  RT T+DFSPILQFEQDP QI
Sbjct: 241 PLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQI 300

Query: 301 LDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYNRQRQAKITG 360
           LDALLPLYLNSQILR+LQESLASELAARMSAMS+A+DNAS+LKK+LS+VYNR+RQAKITG
Sbjct: 301 LDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITG 360

Query: 361 EILEIVAGANA 370
           EILEIVAGANA
Sbjct: 361 EILEIVAGANA 371

[Close]

BLAST of Lsi01G004260 vs. TAIR 10
Match: AT1G15700.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 466.8 bits (1200), Expect = 1.6e-131
Identity = 251/384 (65.36%), Postives = 302/384 (78.65%), Query Frame = 0


Query: 1   MACSNLTMWVSSKPSSSDASA-------------LCFRPFNPLQVPSQGSAARSSSVTPI 60
           M  S  T W+ S PS+S++++             + + PF  L  P++ S+        I
Sbjct: 1   MTGSISTSWLLSSPSNSNSASSSESYSFIATLKPVRYYPFQSL-TPNRISSRSPLPSIQI 60

Query: 61  QCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQL 120
           + G+RELRERIDSVKNTQKITEAM+LVAAA+VRRAQ+AV+ GRPF+E+LVE+LY+IN+  
Sbjct: 61  RAGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSA 120

Query: 121 QTEDIDVPLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISV 180
           Q EDID PL+ VRPVK+VAL+VVTGD+GLCG FNN + KKA  R+ ELK  G+D  VISV
Sbjct: 121 QLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISV 180

Query: 181 GKKGNSYFLRRPYIPVDRFLEGGSL-PTAKEAQAIADDVFSLFISEEVDKVELLYTKFVS 240
           GKKGN+YF RR    VD+ +EGG + PT KEAQ IADDVFSLF+SEEVDKVEL+YTKFVS
Sbjct: 181 GKKGNAYFSRRDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 240

Query: 241 LVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFS 300
           LVKSDPVIHTLLPLS KGE CD+ G CVDA EDE FRLT+K+GKL VER  +  +  + S
Sbjct: 241 LVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLAVERTKLEVEKPEIS 300

Query: 301 PILQFEQDPAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSI 360
           P++QFEQDP QILDA++PLYLNSQILR+LQESLASELA+RM+AMSNATDNA ELKK L++
Sbjct: 301 PLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTM 360

Query: 361 VYNRQRQAKITGEILEIVAGANAL 371
            YNR RQAKITGE+LEIVAGA AL
Sbjct: 361 AYNRARQAKITGELLEIVAGAEAL 383

[Close]

BLAST of Lsi01G004260 vs. TAIR 10
Match: AT2G33040.1 (gamma subunit of Mt ATP synthase )

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-22
Identity = 93/321 (28.97%), Postives = 150/321 (46.73%), Query Frame = 0


Query: 54  LRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDID 113
           +R R+ SVKN QKIT+AMK+VAA+K+R  Q    N R   +    +L +         ID
Sbjct: 48  VRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGD------NPSID 107

Query: 114 VPLTKVRPVKKVALIVVTGDRGLCGSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNS 173
                   VKK  ++ ++ D+GLCG  N+ ++K + +          +   + VG+K  +
Sbjct: 108 --------VKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKA 167

Query: 174 YFLR---RPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKS 233
              R      +     L    L  A +   +ADD+     + E D + ++Y KF S+V  
Sbjct: 168 IMFRDSKNDIVLSVTELNKNPLNYA-QVSVLADDILK---NVEFDALRIVYNKFHSVVAF 227

Query: 234 DPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKL-TVERDAVRTKTSDFSPIL 293
            P + T+L      +  +I G               K G+L + E +   TK        
Sbjct: 228 LPTVSTVLSPEIIEKESEIGG---------------KLGELDSYEIEGGETK-------- 287

Query: 294 QFEQDPAQILDALLPLYLNSQILRSLQESLASELAARMSAMSNATDNASELKKTLSIVYN 353
                  +IL  L     +  +  ++ E+  SE+ ARMSAM +++ NA E+   L++ YN
Sbjct: 288 ------GEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYN 321

Query: 354 RQRQAKITGEILEIVAGANAL 371
           R RQA IT E++EI++GA+AL
Sbjct: 348 RTRQASITTELIEIISGASAL 321

The following BLAST results are available for this feature:

BLAST of Lsi01G004260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29790	3.4e-171	84.04	ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=...	[more]
Q01908	1.8e-169	84.91	ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP...	[more]
P28552	8.9e-164	83.33	ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV...	[more]
P05435	4.4e-155	85.33	ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPC PE=...	[more]
P0C1M0	1.7e-143	73.05	ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1	[more]

BLAST of Lsi01G004260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B017	8.5e-194	97.84	ATP synthase gamma chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484608 ...	[more]
A0A0A0KL78	5.2e-191	95.96	ATP synthase gamma chain OS=Cucumis sativus OX=3659 GN=Csa_6G513760 PE=3 SV=1	[more]
A0A5D3CM68	2.0e-190	98.08	ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1GF38	1.7e-189	95.96	ATP synthase gamma chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IV72	3.7e-189	95.96	ATP synthase gamma chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Lsi01G004260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881980.1	3.2e-195	98.65	ATP synthase gamma chain, chloroplastic-like [Benincasa hispida]	[more]
XP_008439983.1	1.8e-193	97.84	PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo]	[more]
XP_004134761.1	1.1e-190	95.96	ATP synthase gamma chain, chloroplastic [Cucumis sativus] >KGN49112.1 hypothetic...	[more]
TYK13047.1	4.1e-190	98.08	ATP synthase gamma chain [Cucumis melo var. makuwa]	[more]
XP_023543714.1	2.6e-189	95.96	ATP synthase gamma chain, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_02...	[more]

BLAST of Lsi01G004260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04640.1	1.3e-170	84.91	ATPase, F1 complex, gamma subunit protein	[more]
AT1G15700.1	1.6e-131	65.36	ATPase, F1 complex, gamma subunit protein	[more]
AT2G33040.1	4.6e-22	28.97	gamma subunit of Mt ATP synthase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..71
None	No IPR available	GENE3D	3.40.1380.10		coord: 118..241 e-value: 9.6E-36 score: 124.8
None	No IPR available	GENE3D	1.10.287.80	ATP synthase, gamma subunit, helix hairpin domain	coord: 50..117 e-value: 1.7E-13 score: 53.0
None	No IPR available	GENE3D	1.10.287.80	ATP synthase, gamma subunit, helix hairpin domain	coord: 268..370 e-value: 1.4E-28 score: 102.1
None	No IPR available	PANTHER	PTHR11693:SF23	ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC	coord: 1..370
IPR000131	ATP synthase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 348..369 score: 69.09 coord: 215..232 score: 40.67 coord: 122..141 score: 59.5 coord: 317..336 score: 66.7
IPR000131	ATP synthase, F1 complex, gamma subunit	TIGRFAM	TIGR01146	TIGR01146	coord: 50..370 e-value: 1.4E-107 score: 357.7
IPR000131	ATP synthase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 51..370 e-value: 5.4E-89 score: 298.6
IPR000131	ATP synthase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 1..370
IPR000131	ATP synthase, F1 complex, gamma subunit	HAMAP	MF_00815	ATP_synth_gamma_bact	coord: 48..370 score: 32.20892
IPR000131	ATP synthase, F1 complex, gamma subunit	CDD	cd12151	F1-ATPase_gamma	coord: 51..367 e-value: 5.74387E-117 score: 338.783
IPR023632	ATP synthase, F1 complex, gamma subunit conserved site	PROSITE	PS00153	ATPASE_GAMMA	coord: 356..369
IPR035968	ATP synthase, F1 complex, gamma subunit superfamily	SUPERFAMILY	52943	ATP synthase (F1-ATPase), gamma subunit	coord: 50..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004260.1	Lsi01G004260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism