Lsi01G004220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G004220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr01: 3587912 .. 3588544 (+)
RNA-Seq Expression	Lsi01G004220
Synteny	Lsi01G004220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAGGTCGGAAATTGACGACGAGTCGGAGCGAGCGATTTCTCGGTAGCTATAGCTACAGTCATAGCCAAGACTCCAGCGGGACCGACTCGTCGGAACTGGGCGAAGAGGATGTTTGGCCGATGGCGGATAGCGTGGAGACGGACAGGGAAGATTTCGGCGAAGAGAATTCGTTGGCAGCCTGCGGCGACGGAGGGAGTAATAATCAGGGAGGGATTCCGATGAGGCGGGGTAGTGGGGTTCCTCGGGATACACGTGAGCAACACGTAGGCGGGCTGTCGTTGGCATTTGAAGATCCGAGTAGGATGACGTCGGCGAGAATCGTGCATCAGTTTCGGGGGAACGACACGGTGGCGTCTCCACGAGGGCGGCAGATGGCAACGTCAGCGCCCGTGAACGTCCCGGATTGGAGCAAAATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGAGGAGACGTTGGATGACCCGGATTCGGAGATCGTTCCGCCACATGAATACTTGGCCAGAAGTCGAAAAAAGAACGCCACTTCGGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACTTGAGACGGGTCCGGGATGCGGTTTGGATGCAAACCGGGTTCGATGGATAA

mRNA sequence

ATGGCTAAAGGTCGGAAATTGACGACGAGTCGGAGCGAGCGATTTCTCGGTAGCTATAGCTACAGTCATAGCCAAGACTCCAGCGGGACCGACTCGTCGGAACTGGGCGAAGAGGATGTTTGGCCGATGGCGGATAGCGTGGAGACGGACAGGGAAGATTTCGGCGAAGAGAATTCGTTGGCAGCCTGCGGCGACGGAGGGAGTAATAATCAGGGAGGGATTCCGATGAGGCGGGGTAGTGGGGTTCCTCGGGATACACGTGAGCAACACGTAGGCGGGCTGTCGTTGGCATTTGAAGATCCGAGTAGGATGACGTCGGCGAGAATCGTGCATCAGTTTCGGGGGAACGACACGGTGGCGTCTCCACGAGGGCGGCAGATGGCAACGTCAGCGCCCGTGAACGTCCCGGATTGGAGCAAAATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGAGGAGACGTTGGATGACCCGGATTCGGAGATCGTTCCGCCACATGAATACTTGGCCAGAAGTCGAAAAAAGAACGCCACTTCGGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACTTGAGACGGGTCCGGGATGCGGTTTGGATGCAAACCGGGTTCGATGGATAA

Coding sequence (CDS)

ATGGCTAAAGGTCGGAAATTGACGACGAGTCGGAGCGAGCGATTTCTCGGTAGCTATAGCTACAGTCATAGCCAAGACTCCAGCGGGACCGACTCGTCGGAACTGGGCGAAGAGGATGTTTGGCCGATGGCGGATAGCGTGGAGACGGACAGGGAAGATTTCGGCGAAGAGAATTCGTTGGCAGCCTGCGGCGACGGAGGGAGTAATAATCAGGGAGGGATTCCGATGAGGCGGGGTAGTGGGGTTCCTCGGGATACACGTGAGCAACACGTAGGCGGGCTGTCGTTGGCATTTGAAGATCCGAGTAGGATGACGTCGGCGAGAATCGTGCATCAGTTTCGGGGGAACGACACGGTGGCGTCTCCACGAGGGCGGCAGATGGCAACGTCAGCGCCCGTGAACGTCCCGGATTGGAGCAAAATTCTCCGAGTGGACTCGGTGGACTCGCTACACGAGTTGGAGGAGACGTTGGATGACCCGGATTCGGAGATCGTTCCGCCACATGAATACTTGGCCAGAAGTCGAAAAAAGAACGCCACTTCGGTTTTCGTCGGTGTCGGCCGGACCCTCAAGGGCCGGGACTTGAGACGGGTCCGGGATGCGGTTTGGATGCAAACCGGGTTCGATGGATAA

Protein sequence

MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSLAACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTVASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNATSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG

Homology

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BLAST of Lsi01G004220 vs. ExPASy TrEMBL
Match: A0A5D3CNN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006520 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.5e-98
Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y++SQ S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNNSQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           AA G GG N + GGIP+RRGSGVP DTRE+HVGGLSLAFEDPSRMTSARIVHQFRGNDTV
Sbjct: 61  AAYGGGGINISHGGIPVRRGSGVPVDTRERHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSV+SL E +E LDDPDSEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVESLQEFDEPLDDPDSEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

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BLAST of Lsi01G004220 vs. ExPASy TrEMBL
Match: A0A1S3AZM7 (uncharacterized protein LOC103484606 OS=Cucumis melo OX=3656 GN=LOC103484606 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.5e-98
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y+HSQ S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNHSQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           AA G GG N + GGI +RRGSGVP DTRE+HVGGLSLAFEDPSRMTSARIVHQFRGNDTV
Sbjct: 61  AAYGGGGINISHGGISVRRGSGVPVDTRERHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSV+SL E +E LDDPDSEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVESLQEFDEPLDDPDSEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

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BLAST of Lsi01G004220 vs. ExPASy TrEMBL
Match: A0A0A0KHD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513790 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 184/211 (87.20%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y+H+Q S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNHNQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           A    GG N + GGIP+RRGSGVP DTRE+HVGGLSLAFEDPSR TSARIVHQFRGNDTV
Sbjct: 61  AGYDGGGINISHGGIPVRRGSGVPGDTRERHVGGLSLAFEDPSRKTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSVDSL E +E LDDP+SEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLQEFDEPLDDPESEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

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BLAST of Lsi01G004220 vs. ExPASy TrEMBL
Match: A0A6J1EM13 (uncharacterized protein LOC111433787 OS=Cucurbita moschata OX=3662 GN=LOC111433787 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.1e-92
Identity = 179/215 (83.26%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDR-EDFGEENS 60
           MAKGRKLTTSRSERFLG+Y YSHS DS+GTDSS+LGEEDVWPM D+VE DR EDFGE NS
Sbjct: 1   MAKGRKLTTSRSERFLGTYGYSHSHDSTGTDSSDLGEEDVWPMDDTVEPDREEDFGEGNS 60

Query: 61  LAACGDGG----SNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRG 120
            A  G  G    SN  GGI +R+G GVPRDTRE+HVGGLSLAFEDP RMTS RIVHQFRG
Sbjct: 61  SALAGGSGDGTNSNRHGGISVRKGKGVPRDTRERHVGGLSLAFEDPGRMTSGRIVHQFRG 120

Query: 121 NDTVASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSR 180
           ND+ ASPRGRQMATSAPVNVPDWSKILRVDS DSLHEL+ETLDD DSEIVPPHEYLARSR
Sbjct: 121 NDSQASPRGRQMATSAPVNVPDWSKILRVDSADSLHELDETLDDRDSEIVPPHEYLARSR 180

Query: 181 KKNATSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           K NATSVFVGVGRTLKGRD+RRVRDAVW QTGFDG
Sbjct: 181 KMNATSVFVGVGRTLKGRDMRRVRDAVWRQTGFDG 215

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BLAST of Lsi01G004220 vs. ExPASy TrEMBL
Match: A0A6J1GE59 (uncharacterized protein LOC111453370 OS=Cucurbita moschata OX=3662 GN=LOC111453370 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.7e-91
Identity = 178/210 (84.76%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTS+SER LGSYSYSHSQ ++ TDSSELGEEDVWPM D VETDREDFGEENSL
Sbjct: 1   MAKGRKLTTSQSERLLGSYSYSHSQGNTETDSSELGEEDVWPMPDRVETDREDFGEENSL 60

Query: 61  AACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTVA 120
             C  GG  + G IP+R GSGVP   RE+HVGGLSLAFEDP RM SARIVH+FRG+DTVA
Sbjct: 61  -PCVGGGRKSHGEIPVRTGSGVP---RERHVGGLSLAFEDPERMASARIVHRFRGHDTVA 120

Query: 121 SPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNAT 180
           SPRGRQMATSAPVNVPDWSKILRVDSVDSLHEL+E LDDPDSEIVPPHEYLARSRKKNAT
Sbjct: 121 SPRGRQMATSAPVNVPDWSKILRVDSVDSLHELDEPLDDPDSEIVPPHEYLARSRKKNAT 180

Query: 181 SVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           S FVGVGRTLKGRD+RRVRDAVW QTGFDG
Sbjct: 181 SGFVGVGRTLKGRDMRRVRDAVWRQTGFDG 206

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BLAST of Lsi01G004220 vs. NCBI nr
Match: XP_038882726.1 (uncharacterized protein LOC120073884 [Benincasa hispida])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 195/210 (92.86%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSYSY+H+Q+S+G+DSSELGEEDVWPMAD+VETDREDFGEENS 
Sbjct: 1   MAKGRKLTTSRSERFLGSYSYNHNQNSTGSDSSELGEEDVWPMADTVETDREDFGEENSF 60

Query: 61  AACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTVA 120
           AACG GGSNN GGIP+RRGSGVPRDTRE+HVGGLSLAFEDPSRMTSARIVHQFRGN+TVA
Sbjct: 61  AACGGGGSNNHGGIPVRRGSGVPRDTRERHVGGLSLAFEDPSRMTSARIVHQFRGNETVA 120

Query: 121 SPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNAT 180
           SPRGRQMATSAPVNVPDWSKILRV+SVDSLHEL+ETLDDPDSEIVPPHEYLARSRKKNAT
Sbjct: 121 SPRGRQMATSAPVNVPDWSKILRVESVDSLHELDETLDDPDSEIVPPHEYLARSRKKNAT 180

Query: 181 SVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           SVFVGVGRTLKGRDLRRVRDAVW+QTGFDG
Sbjct: 181 SVFVGVGRTLKGRDLRRVRDAVWLQTGFDG 210

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BLAST of Lsi01G004220 vs. NCBI nr
Match: TYK13050.1 (uncharacterized protein E5676_scaffold255G006520 [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y++SQ S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNNSQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           AA G GG N + GGIP+RRGSGVP DTRE+HVGGLSLAFEDPSRMTSARIVHQFRGNDTV
Sbjct: 61  AAYGGGGINISHGGIPVRRGSGVPVDTRERHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSV+SL E +E LDDPDSEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVESLQEFDEPLDDPDSEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

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BLAST of Lsi01G004220 vs. NCBI nr
Match: XP_008439981.1 (PREDICTED: uncharacterized protein LOC103484606 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y+HSQ S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNHSQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           AA G GG N + GGI +RRGSGVP DTRE+HVGGLSLAFEDPSRMTSARIVHQFRGNDTV
Sbjct: 61  AAYGGGGINISHGGISVRRGSGVPVDTRERHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSV+SL E +E LDDPDSEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVESLQEFDEPLDDPDSEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

[Close]

BLAST of Lsi01G004220 vs. NCBI nr
Match: XP_004134758.1 (uncharacterized protein LOC101218032 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 3.3e-96
Identity = 184/211 (87.20%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y+H+Q S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNHNQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           A    GG N + GGIP+RRGSGVP DTRE+HVGGLSLAFEDPSR TSARIVHQFRGNDTV
Sbjct: 61  AGYDGGGINISHGGIPVRRGSGVPGDTRERHVGGLSLAFEDPSRKTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSVDSL E +E LDDP+SEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLQEFDEPLDDPESEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211

[Close]

BLAST of Lsi01G004220 vs. NCBI nr
Match: KAE8647661.1 (hypothetical protein Csa_002850 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 5.3e-94
Identity = 181/208 (87.02%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENSL 60
           MAKGRKLTTSRSERFLGSY+Y+H+Q S+G+DSSELGEEDVWPM DSVET+RE+F EENSL
Sbjct: 1   MAKGRKLTTSRSERFLGSYTYNHNQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENSL 60

Query: 61  AACGDGGSN-NQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
           A    GG N + GGIP+RRGSGVP DTRE+HVGGLSLAFEDPSR TSARIVHQFRGNDTV
Sbjct: 61  AGYDGGGINISHGGIPVRRGSGVPGDTRERHVGGLSLAFEDPSRKTSARIVHQFRGNDTV 120

Query: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLARSRKKNA 180
           ASPRGRQMATSAPVNVPDWSKILRVDSVDSL E +E LDDP+SEIVPPHEYLARSRKKNA
Sbjct: 121 ASPRGRQMATSAPVNVPDWSKILRVDSVDSLQEFDEPLDDPESEIVPPHEYLARSRKKNA 180

Query: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTG 208
           TSVFVGVGRTLKGRDLRRVRDAVWMQTG
Sbjct: 181 TSVFVGVGRTLKGRDLRRVRDAVWMQTG 208

[Close]

BLAST of Lsi01G004220 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-42
Identity = 109/223 (48.88%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLG-SYSYSHSQDSSGTDSSELGEEDVWPMADSVETDREDFGEENS 60
           MA+GRKLT S+SER+LG SYSY  S  +S TD SEL EED+W  A            ++S
Sbjct: 1   MARGRKLTMSQSERYLGSSYSYGDSNGNSATDESELTEEDIWSHA-----------VDHS 60

Query: 61  LAACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDTV 120
                  G+ N     +R G         +  GGLSLAFED S  +S RIVHQ RG    
Sbjct: 61  PEMLESHGAWNTRDAVVRNG---------RVGGGLSLAFEDAS--SSPRIVHQIRGGGEG 120

Query: 121 ASPRG------RQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPDSEIVPPHEYLAR 180
               G      RQ+A+SAPVNVPDWSKI RV+SV+S+HE +E  ++    ++PPHEYLA+
Sbjct: 121 GGGGGGGGRVERQLASSAPVNVPDWSKIYRVNSVESIHESDEEEEEDSGMMMPPHEYLAK 180

Query: 181 SRKKNAT------SVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           S+++ +       SVF GVGRTLKGR+LRRVRDA+W QTGF G
Sbjct: 181 SQQRRSRKSGGGGSVFEGVGRTLKGRELRRVRDAIWSQTGFYG 201

[Close]

BLAST of Lsi01G004220 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 167.9 bits (424), Expect = 8.5e-42
Identity = 109/227 (48.02%), Postives = 135/227 (59.47%), Query Frame = 0


Query: 1   MAKGRKLTT-SRSERFLGSYSYSHSQDSSGTDSSELGEEDVWPMA---DSVETDREDFGE 60
           MAKGRK TT +RS+R+LGSY+Y  S  +S TD  ELGEED+W  A   D    + E +G 
Sbjct: 1   MAKGRKPTTMNRSDRYLGSYTYGDSHGNSVTDELELGEEDIWSPAVIHDDTTENEESYGT 60

Query: 61  ENSLAACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFE-----DPSRMTSARIVH 120
            N  A  G  G                       VGGLSLAFE      PS  +S  IV 
Sbjct: 61  WNLRATLGKNG----------------------RVGGLSLAFEGSLVAPPS--SSPMIVQ 120

Query: 121 QFRGNDTVASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLD-DPDSEIVPPHEY 180
           +  G         R++A+SAPVNVPDWSKI RVDSV+S+HEL++  D D +S ++PPHEY
Sbjct: 121 KIHGGGGEGEEDRRKLASSAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMMPPHEY 180

Query: 181 LARSRKKNA-------TSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
           LA+S+ + +        SVF GVGRTLKGR+LRRVRDA+W QTGF G
Sbjct: 181 LAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQTGFYG 203

[Close]

BLAST of Lsi01G004220 vs. TAIR 10
Match: AT4G21930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-28
Identity = 94/221 (42.53%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 1   MAKGRKLTTSRSERFLGSYSYS--HSQDSSGTDSSELGEEDVWPMADSVETDREDFGEEN 60
           M KGR L  SRSERFLGS+  S  H  D   T   EL EEDVW + +  E          
Sbjct: 1   MGKGRSLPISRSERFLGSHQQSDDHHVDGETTFELELMEEDVWSVVEPDEPKELGAWNAR 60

Query: 61  SLAACGDGGSNNQGGIPMRRGSGVPRDTREQHVGGLSLAFEDPSRMTSARIVHQFRGNDT 120
           SL A G       G +       VP D                                 
Sbjct: 61  SLEASGSEWRRKGGRV---SDLTVPSD--------------------------------- 120

Query: 121 VASPRGRQMATSAPVNVPDWSKILRVDSVDSLHELEETLDDPD-------SEIVPPHEYL 180
               R R +ATSAPV VPDWSKIL+V+SV S+H      D+ D       S +VPPHEY+
Sbjct: 121 --GQRKRHVATSAPVKVPDWSKILKVESVKSMHNNNNDNDNADVADCDWESAMVPPHEYV 180

Query: 181 -ARSRK-KNATSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211
            ARSR     +SVF+GVGRTLKGRD+RRVRDAVW QTGF G
Sbjct: 181 AARSRNGDGGSSVFLGVGRTLKGRDMRRVRDAVWSQTGFYG 183

[Close]

BLAST of Lsi01G004220 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 128 ATSAPVNVPDWSKILRVDSVDSLHELEETLDDPD------SEIVPPHEYLARSRKKNATS 187
           A+S PVNVPDWSKILR +  D+     E  DD D       + +PPHE+LA++R   + S
Sbjct: 76  ASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDGGDWLPPHEFLAKTRMA-SFS 135

Query: 188 VFVGVGRTLKGRDLRRVRDAVWMQTGF 209
           V  GVGRTLKGRDL RVR+A++ + GF
Sbjct: 136 VHEGVGRTLKGRDLSRVRNAIFEKFGF 161

[Close]

BLAST of Lsi01G004220 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 110 VHQFRGNDTVASPRGRQMAT---SAPVNVPDWSKILRV---------DSVDSLHELEETL 169
           + + R   T     G +  T   S PVN+PDWSKIL+          D  D   E ++  
Sbjct: 55  ISRLRRKPTKTGDSGNREITKTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDS 114

Query: 170 DDPDSEIVPPHEYLARSRKKNATSVFVGVGRTLKGRDLRRVRDAVWMQTGF 209
           +D    ++PPHEYLAR R+ ++ +V  G+G T KGRDLRR+R+A+W + GF
Sbjct: 115 NDGGRRMIPPHEYLAR-RRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGF 164

The following BLAST results are available for this feature:

BLAST of Lsi01G004220 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G004220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNN0	6.5e-98	88.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZM7	8.5e-98	88.63	uncharacterized protein LOC103484606 OS=Cucumis melo OX=3656 GN=LOC103484606 PE=...	[more]
A0A0A0KHD0	1.6e-96	87.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513790 PE=4 SV=1	[more]
A0A6J1EM13	4.1e-92	83.26	uncharacterized protein LOC111433787 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1GE59	7.7e-91	84.76	uncharacterized protein LOC111453370 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]

BLAST of Lsi01G004220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882726.1	4.6e-106	92.86	uncharacterized protein LOC120073884 [Benincasa hispida]	[more]
TYK13050.1	1.3e-97	88.63	uncharacterized protein E5676_scaffold255G006520 [Cucumis melo var. makuwa]	[more]
XP_008439981.1	1.8e-97	88.63	PREDICTED: uncharacterized protein LOC103484606 [Cucumis melo]	[more]
XP_004134758.1	3.3e-96	87.20	uncharacterized protein LOC101218032 [Cucumis sativus]	[more]
KAE8647661.1	5.3e-94	87.02	hypothetical protein Csa_002850 [Cucumis sativus]	[more]

BLAST of Lsi01G004220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11700.1	2.9e-42	48.88	Protein of unknown function, DUF584	[more]
AT1G61930.1	8.5e-42	48.02	Protein of unknown function, DUF584	[more]
AT4G21930.1	4.1e-28	42.53	Protein of unknown function, DUF584	[more]
AT5G60680.1	5.2e-15	51.72	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.5e-14	39.64	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 33..209 e-value: 1.9E-39 score: 136.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 1..210
None	No IPR available	PANTHER	PTHR33083:SF51	SUBFAMILY NOT NAMED	coord: 1..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004220.1	Lsi01G004220.1	mRNA