Lsi01G004100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G004100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CRIB domain-containing protein RIC10-like
Location	chr01: 3480789 .. 3481458 (+)
RNA-Seq Expression	Lsi01G004100
Synteny	Lsi01G004100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGTAGTCGTGAAAGATCGTGATATGGAAATCGGATATCCGACCGATGTGAAGCATGTAGCTCATATCGGATTGGATAATTCATCTCCATCCGGTTCAGCCCCCAGTTGGGTATATATTATTTCTCTTAATTTTTCTTTTTCAATTATTTGCTCTTCCGATGTATTATTTTTCATCCCTTGTAGTTTGAAATTAAAAAATAAAAATAATAATAATAATAATAATAATAACGCAGATGAATGAATTTAAAGCTGGTGACGTGAGTGAACGAAGGGATTCGAGTTCAACGGCTGTAACTGCTCTTACTCATTGGTCCACTCATTCCCAAGGTTTGTAATTTTAAAATTAATCATATAGTTTTGAAAGGGTTTAACGTGAATTAATTACCAAAATTAACATAGATTTGATTGTGTGTTCGATGTGCAGAATTTGATCTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCCAAAGAAACCAAAGAAAAAAAAGAGTTGCAAGAATACGACGACGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCCACATGCAATAACCCAGTAGAGCCGATCCCAAATTATCAAATTTAGAAAAAATAATTATATATATGGGCTTAGCTTTTCCATAATTTGTTACACAACTTTTTCAAAGCGTG

mRNA sequence

ATGATTGTAGTCGTGAAAGATCGTGATATGGAAATCGGATATCCGACCGATGTGAAGCATGTAGCTCATATCGGATTGGATAATTCATCTCCATCCGGTTCAGCCCCCAGTTGGATGAATGAATTTAAAGCTGGTGACGTGAGTGAACGAAGGGATTCGAGTTCAACGGCTGTAACTGCTCTTACTCATTGGTCCACTCATTCCCAAGAATTTGATCTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCCAAAGAAACCAAAGAAAAAAAAGAGTTGCAAGAATACGACGACGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCCACATGCAATAACCCAGTAGAGCCGATCCCAAATTATCAAATTTAGAAAAAATAATTATATATATGGGCTTAGCTTTTCCATAATTTGTTACACAACTTTTTCAAAGCGTG

Coding sequence (CDS)

ATGATTGTAGTCGTGAAAGATCGTGATATGGAAATCGGATATCCGACCGATGTGAAGCATGTAGCTCATATCGGATTGGATAATTCATCTCCATCCGGTTCAGCCCCCAGTTGGATGAATGAATTTAAAGCTGGTGACGTGAGTGAACGAAGGGATTCGAGTTCAACGGCTGTAACTGCTCTTACTCATTGGTCCACTCATTCCCAAGAATTTGATCTTTCAATAGGTTACCAATCGGCATCCGACATGTCGATGGAGCTTCCAAAGAAACCAAAGAAAAAAAAGAGTTGCAAGAATACGACGACGTCGTCGTCGTCAAGAACAACGAAGTCAAAAGCCACATGCAATAACCCAGTAGAGCCGATCCCAAATTATCAAATTTAG

Protein sequence

MIVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTALTHWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTTTSSSSRTTKSKATCNNPVEPIPNYQI

Homology

[Close]

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-11
Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MIVVVKDRD-MEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGD--VSERRDSSSTA 60
           +  V K+RD +EIG+PTDVKHVAHIG + S  SGSAP WM+EFK G   +S R  S S A
Sbjct: 18  IFAVEKERDEIEIGFPTDVKHVAHIGWEGS--SGSAPGWMSEFKVGAELLSPRPSSFSNA 77

Query: 61  VTALTHW-STHSQEFDLSIGYQSASDMSMELP-------KKPKKKKSCKNTTTSSSSRTT 112
             + + + S+ S +FD     +  SD   ++P        K  KKKS +   +SSSS + 
Sbjct: 78  RPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLPKNNKKKSSRRKKSSSSSSSP 137

[Close]

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot
Match: F4I5N6 (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 6  KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKA-----GDVSERRDSSSTAV 59
          KD+DM+IG+PTDVKHVAHIG D   P+ + PSWM +FK      G V  R D+++  +
Sbjct: 22 KDKDMQIGFPTDVKHVAHIGSD--GPATNVPSWMGDFKPQENENGQVVSRADANNNQI 77

[Close]

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 6   KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSE------RRDSSSTAVT 65
           K+ +M+IG PTDVKHVAHIG D  S + +APSWMN+FK+  V E        DSS    +
Sbjct: 30  KEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQGLGEDDSSVKCQS 89

Query: 66  ALTHWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTTTSSSSRTTKSKATCNN 118
                +    +   S    S+   S    +  K K+   N  TSSS RT    +T ++
Sbjct: 90  EFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTKDEDSTSSS 147

[Close]

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 6  KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKA-----GDVSERRDSS 55
          K+++M+IG+PTDVKHVAHIG D   P+ + PSWMN+FK      G V  R +S+
Sbjct: 23 KEQEMQIGFPTDVKHVAHIGSD--GPTNTTPSWMNDFKTQEHEKGQVVSRGNSN 74

[Close]

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.9e-07
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 6   KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAG---DVSERRDSSSTAVTALT 65
           K+ +++IG PTDVKHVAHIG D  S + +APSWM EF +G   + +E      +++  ++
Sbjct: 28  KEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEGVGEDDSSIKCMS 87

Query: 66  HWSTHSQEF-DLSIGYQSASDMSMELPK---KPKKKKSCKNTTTSSSSRTTK 111
            +   S++  +L    + A+       K     K K+   N  TSSSSR  K
Sbjct: 88  EYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPK 139

[Close]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL
Match: A0A5D3CMM6 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006630 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTAL 61
           I VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL
Sbjct: 18  IFVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTAL 77

Query: 62  THWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVE 121
           +HWSTHSQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATCNNPVE
Sbjct: 78  SHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCNNPVE 137

Query: 122 PIPNYQI 128
           PIPNYQI
Sbjct: 138 PIPNYQI 144

[Close]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL
Match: A0A1S3B0N0 (CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484596 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTAL 61
           I VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL
Sbjct: 18  IFVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTAL 77

Query: 62  THWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVE 121
           +HWSTHSQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATCNNPVE
Sbjct: 78  SHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCNNPVE 137

Query: 122 PIPNYQI 128
           PIPNYQI
Sbjct: 138 PIPNYQI 144

[Close]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL
Match: A0A1S3B004 (CRIB domain-containing protein RIC10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484596 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 113/125 (90.40%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 4   VVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTALTH 63
           VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL+H
Sbjct: 22  VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTALSH 81

Query: 64  WSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVEPI 123
           WSTHSQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATCNNPVEPI
Sbjct: 82  WSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCNNPVEPI 141

Query: 124 PNYQI 128
           PNYQI
Sbjct: 142 PNYQI 146

[Close]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL
Match: A0A0A0KL87 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G514880 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.6e-53
Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 4   VVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTALTH 63
           VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTALTH
Sbjct: 23  VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTALTH 82

Query: 64  WSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVEPI 123
           WST+SQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATC NPVEPI
Sbjct: 83  WSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCKNPVEPI 142

Query: 124 PNYQI 128
           PN+QI
Sbjct: 143 PNFQI 147

[Close]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL
Match: A0A6J1CL66 (CRIB domain-containing protein RIC10-like OS=Momordica charantia OX=3673 GN=LOC111012448 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-41
Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKA----GDVSERRDSSSTA 61
           I VVK+RDMEIG+PTDVKHVAHIGLD+SSPS SAPSWMNEFK     GD SERRDS+STA
Sbjct: 18  IFVVKERDMEIGHPTDVKHVAHIGLDSSSPSASAPSWMNEFKTAQSLGDASERRDSNSTA 77

Query: 62  VTALTHWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTTTSSSSRTTKSKATCNN 121
           +TALTHWSTHSQEFDLSIGYQSASD S+E PKK KKKKSCKN+T+  SS ++ S  T   
Sbjct: 78  ITALTHWSTHSQEFDLSIGYQSASDASLEAPKKSKKKKSCKNSTSVRSSSSSSSSRTS-- 137

Query: 122 PVEPIPNYQI 128
             + IPNYQ+
Sbjct: 138 --KQIPNYQL 143

[Close]

BLAST of Lsi01G004100 vs. NCBI nr
Match: XP_038882223.1 (CRIB domain-containing protein RIC10-like [Benincasa hispida])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTAL 61
           I VVKDR++EIGYPTDVKHVAHIGLD+SS S SAPSWMNEFKAGDVSERRDSSSTAVTAL
Sbjct: 18  IFVVKDREIEIGYPTDVKHVAHIGLDSSSLSASAPSWMNEFKAGDVSERRDSSSTAVTAL 77

Query: 62  THWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTTTSSSSRTTKSKATCNNPVEP 121
           THWSTHSQEFDLSIGYQSASDMS+ELPKKPKKKKSCKN TTSSSS+TTKSK TCNNPVEP
Sbjct: 78  THWSTHSQEFDLSIGYQSASDMSLELPKKPKKKKSCKN-TTSSSSKTTKSKPTCNNPVEP 137

Query: 122 IPNYQI 128
           IPNYQI
Sbjct: 138 IPNYQI 142

[Close]

BLAST of Lsi01G004100 vs. NCBI nr
Match: XP_008439967.1 (PREDICTED: CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo] >TYK13061.1 CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTAL 61
           I VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL
Sbjct: 18  IFVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTAL 77

Query: 62  THWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVE 121
           +HWSTHSQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATCNNPVE
Sbjct: 78  SHWSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCNNPVE 137

Query: 122 PIPNYQI 128
           PIPNYQI
Sbjct: 138 PIPNYQI 144

[Close]

BLAST of Lsi01G004100 vs. NCBI nr
Match: XP_008439966.1 (PREDICTED: CRIB domain-containing protein RIC10-like isoform X1 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 113/125 (90.40%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 4   VVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTALTH 63
           VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL+H
Sbjct: 22  VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTALSH 81

Query: 64  WSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVEPI 123
           WSTHSQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATCNNPVEPI
Sbjct: 82  WSTHSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCNNPVEPI 141

Query: 124 PNYQI 128
           PNYQI
Sbjct: 142 PNYQI 146

[Close]

BLAST of Lsi01G004100 vs. NCBI nr
Match: XP_011658161.1 (CRIB domain-containing protein RIC10 isoform X2 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 7.9e-53
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 2   IVVVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTAL 61
           I VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTAL
Sbjct: 18  IFVVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTAL 77

Query: 62  THWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVE 121
           THWST+SQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATC NPVE
Sbjct: 78  THWSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCKNPVE 137

Query: 122 PIPNYQI 128
           PIPN+QI
Sbjct: 138 PIPNFQI 144

[Close]

BLAST of Lsi01G004100 vs. NCBI nr
Match: XP_011658160.1 (CRIB domain-containing protein RIC10 isoform X1 [Cucumis sativus] >KGN49127.1 hypothetical protein Csa_003276 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 4   VVKDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSERRDSSSTAVTALTH 63
           VVKDR+MEIGYPTDVKHVAHIGLDNSSPS SAPSWMNEFK G+VSERRDSSSTAVTALTH
Sbjct: 23  VVKDREMEIGYPTDVKHVAHIGLDNSSPSASAPSWMNEFKGGEVSERRDSSSTAVTALTH 82

Query: 64  WSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTT-TSSSSRTTKSKATCNNPVEPI 123
           WST+SQEFD+SIGYQSASD+S+ELPKKPKKK+S KNTT +SSSSRTTKSKATC NPVEPI
Sbjct: 83  WSTNSQEFDISIGYQSASDLSLELPKKPKKKRSSKNTTMSSSSSRTTKSKATCKNPVEPI 142

Query: 124 PNYQI 128
           PN+QI
Sbjct: 143 PNFQI 147

[Close]

BLAST of Lsi01G004100 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 68.2 bits (165), Expect = 5.6e-12
Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 1   MIVVVKDRD-MEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGD--VSERRDSSSTA 60
           +  V K+RD +EIG+PTDVKHVAHIG + S  SGSAP WM+EFK G   +S R  S S A
Sbjct: 18  IFAVEKERDEIEIGFPTDVKHVAHIGWEGS--SGSAPGWMSEFKVGAELLSPRPSSFSNA 77

Query: 61  VTALTHW-STHSQEFDLSIGYQSASDMSMELP-------KKPKKKKSCKNTTTSSSSRTT 112
             + + + S+ S +FD     +  SD   ++P        K  KKKS +   +SSSS + 
Sbjct: 78  RPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLPKNNKKKSSRRKKSSSSSSSP 137

[Close]

BLAST of Lsi01G004100 vs. TAIR 10
Match: AT1G04450.1 (ROP-interactive CRIB motif-containing protein 3 )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 6  KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKA-----GDVSERRDSSSTAV 59
          KD+DM+IG+PTDVKHVAHIG D   P+ + PSWM +FK      G V  R D+++  +
Sbjct: 22 KDKDMQIGFPTDVKHVAHIGSD--GPATNVPSWMGDFKPQENENGQVVSRADANNNQI 77

[Close]

BLAST of Lsi01G004100 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 6   KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAGDVSE------RRDSSSTAVT 65
           K+ +M+IG PTDVKHVAHIG D  S + +APSWMN+FK+  V E        DSS    +
Sbjct: 30  KEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQGLGEDDSSVKCQS 89

Query: 66  ALTHWSTHSQEFDLSIGYQSASDMSMELPKKPKKKKSCKNTTTSSSSRTTKSKATCNN 118
                +    +   S    S+   S    +  K K+   N  TSSS RT    +T ++
Sbjct: 90  EFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTKDEDSTSSS 147

[Close]

BLAST of Lsi01G004100 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 )

HSP 1 Score: 57.4 bits (137), Expect = 9.8e-09
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 6  KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKA-----GDVSERRDSS 55
          K+++M+IG+PTDVKHVAHIG D   P+ + PSWMN+FK      G V  R +S+
Sbjct: 23 KEQEMQIGFPTDVKHVAHIGSD--GPTNTTPSWMNDFKTQEHEKGQVVSRGNSN 74

[Close]

BLAST of Lsi01G004100 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 )

HSP 1 Score: 54.7 bits (130), Expect = 6.4e-08
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 6   KDRDMEIGYPTDVKHVAHIGLDNSSPSGSAPSWMNEFKAG---DVSERRDSSSTAVTALT 65
           K+ +++IG PTDVKHVAHIG D  S + +APSWM EF +G   + +E      +++  ++
Sbjct: 28  KEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEGVGEDDSSIKCMS 87

Query: 66  HWSTHSQEF-DLSIGYQSASDMSMELPK---KPKKKKSCKNTTTSSSSRTTK 111
            +   S++  +L    + A+       K     K K+   N  TSSSSR  K
Sbjct: 88  EYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPK 139

The following BLAST results are available for this feature:

BLAST of Lsi01G004100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0Y9	7.8e-11	43.44	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
F4I5N6	3.6e-08	50.00	CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1...	[more]
Q1G3K8	3.6e-08	36.44	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]
F4IVV0	1.4e-07	51.85	CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1...	[more]
Q1PF35	8.9e-07	34.82	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1...	[more]

BLAST of Lsi01G004100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CMM6	1.2e-54	89.76	CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3B0N0	1.2e-54	89.76	CRIB domain-containing protein RIC10-like isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
A0A1S3B004	2.0e-54	90.40	CRIB domain-containing protein RIC10-like isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KL87	6.6e-53	88.80	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G514880 PE=4 S...	[more]
A0A6J1CL66	5.8e-41	73.08	CRIB domain-containing protein RIC10-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Lsi01G004100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882223.1	1.1e-54	92.06	CRIB domain-containing protein RIC10-like [Benincasa hispida]	[more]
XP_008439967.1	2.5e-54	89.76	PREDICTED: CRIB domain-containing protein RIC10-like isoform X2 [Cucumis melo] >...	[more]
XP_008439966.1	4.2e-54	90.40	PREDICTED: CRIB domain-containing protein RIC10-like isoform X1 [Cucumis melo]	[more]
XP_011658161.1	7.9e-53	88.19	CRIB domain-containing protein RIC10 isoform X2 [Cucumis sativus]	[more]
XP_011658160.1	1.4e-52	88.80	CRIB domain-containing protein RIC10 isoform X1 [Cucumis sativus] >KGN49127.1 hy...	[more]

BLAST of Lsi01G004100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04900.1	5.6e-12	43.44	ROP-interactive CRIB motif-containing protein 10	[more]
AT1G04450.1	2.6e-09	50.00	ROP-interactive CRIB motif-containing protein 3	[more]
AT4G28556.1	2.6e-09	36.44	PAK-box/P21-Rho-binding family protein	[more]
AT2G33460.1	9.8e-09	51.85	ROP-interactive CRIB motif-containing protein 1	[more]
AT2G20430.1	6.4e-08	34.82	ROP-interactive CRIB motif-containing protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 12..45 e-value: 0.0013 score: 28.0
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 11..50 e-value: 1.7E-8 score: 34.7
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 12..25 score: 8.766596
IPR036936	CRIB domain superfamily	GENE3D	3.90.810.10	CRIB domain	coord: 6..56 e-value: 1.9E-5 score: 26.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..127
None	No IPR available	PANTHER	PTHR46325:SF24	CRIB DOMAIN-CONTAINING PROTEIN RIC10-LIKE	coord: 2..114
None	No IPR available	CDD	cd00132	CRIB	coord: 10..49 e-value: 2.10982E-6 score: 40.1145
IPR044510	CRIB domain-containing protein RIC1-like	PANTHER	PTHR46325	CRIB DOMAIN-CONTAINING PROTEIN RIC8	coord: 2..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004100.1	Lsi01G004100.1	mRNA