Lsi01G003730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G003730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr01: 3288460 .. 3289557 (+)
RNA-Seq Expression	Lsi01G003730
Synteny	Lsi01G003730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCCATTTCCAGATGATTTCAAGTGCCCTATTTCTCTGGAAATAATGTCGGACCCTGTAATACTCTCCTCCGGCCACACCTTTGATCGTTCTTCAATCCAGCGCTGGCTCGACGCCGGTCACCGGACTTGCCCAATCACCCAATTGCCCCTTCCTCAAAACCCTTCCCTAATCCCTAACCATGCCCTCCGAAGCTTAATTTCAAATTTCAACCCTGTTTCACTTTCCAAGCCATTTCTCCCTCATCCGCCGCCTCAAACCCTAATCTCGATTCTCATCTCTCCTTCTTCCTCCCTCGATTCCAAGCTCGATTGCCTCAATCAACTCGCCAGGGTTTCAAAGCGCGATTCCGCTATGCGTCGAAGATTGACCGAGTCCGGTGCCGTCTCGGCCGTTCTTAAATGCGTCCGTTCTGACGATCCCAGCCTCCAAGAGAAGGCTCTCTCGCTCTTGCTTAATCTTAGTTTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAGGGAGCTATTGGTCTCACCGTGGCTGCTCTTCAAGCGAGGTCCGCCGATTGCAGAGCCGTAGCGGCCACGATGCTGACGAGCTTGGCGGTTGTGGAGGTTAACAAGGCTACAATTGGGGCATATCCTTATGCGGTTCGTTCTCTGGTTTATCTCTTACGCAACGGCAGCATCAGAGAGCAGAAGGAAGCTGCAACTGCGCTTTACGCCATTTGTTCATTCCCTGGGAACCGTGTGCGGGCTGTGGAATGTGGGGCCGTTCCCATTTTGCTTAAAATTGCAAATTCTGGGCTGGATAGAGCAGTGGAAGTTCTGGGGGTTTTGGCGAAGTGCAAGGAAGGTCGAGAAGAGATGCAACGGTTCAAGGGATGTGTGGAGATTTTGGGTCGTGTTTTGAGAAACGGAGGCCCAAGAGGAGTTCAATATGCTCTTCTAACTCTGACTTCCCTCTGCTGCCATTGCGAGCGAGTGTGTGTGGAGGCCAGAAGAGAAGGCGTTTTGGGAATCTGTATGACATTGATTGATGACGATAATGAAAAGATCAGAGCAAATGCTGCAAATTTAATTCATTTACTCCGCGGAAACAACCCATGA

mRNA sequence

ATGGCGGCTCCATTTCCAGATGATTTCAAGTGCCCTATTTCTCTGGAAATAATGTCGGACCCTGTAATACTCTCCTCCGGCCACACCTTTGATCGTTCTTCAATCCAGCGCTGGCTCGACGCCGGTCACCGGACTTGCCCAATCACCCAATTGCCCCTTCCTCAAAACCCTTCCCTAATCCCTAACCATGCCCTCCGAAGCTTAATTTCAAATTTCAACCCTGTTTCACTTTCCAAGCCATTTCTCCCTCATCCGCCGCCTCAAACCCTAATCTCGATTCTCATCTCTCCTTCTTCCTCCCTCGATTCCAAGCTCGATTGCCTCAATCAACTCGCCAGGGTTTCAAAGCGCGATTCCGCTATGCGTCGAAGATTGACCGAGTCCGGTGCCGTCTCGGCCGTTCTTAAATGCGTCCGTTCTGACGATCCCAGCCTCCAAGAGAAGGCTCTCTCGCTCTTGCTTAATCTTAGTTTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAGGGAGCTATTGGTCTCACCGTGGCTGCTCTTCAAGCGAGGTCCGCCGATTGCAGAGCCGTAGCGGCCACGATGCTGACGAGCTTGGCGGTTGTGGAGGTTAACAAGGCTACAATTGGGGCATATCCTTATGCGGTTCGTTCTCTGGTTTATCTCTTACGCAACGGCAGCATCAGAGAGCAGAAGGAAGCTGCAACTGCGCTTTACGCCATTTGTTCATTCCCTGGGAACCGTGTGCGGGCTGTGGAATGTGGGGCCGTTCCCATTTTGCTTAAAATTGCAAATTCTGGGCTGGATAGAGCAGTGGAAGTTCTGGGGGTTTTGGCGAAGTGCAAGGAAGGTCGAGAAGAGATGCAACGGTTCAAGGGATGTGTGGAGATTTTGGGTCGTGTTTTGAGAAACGGAGGCCCAAGAGGAGTTCAATATGCTCTTCTAACTCTGACTTCCCTCTGCTGCCATTGCGAGCGAGTGTGTGTGGAGGCCAGAAGAGAAGGCGTTTTGGGAATCTGTATGACATTGATTGATGACGATAATGAAAAGATCAGAGCAAATGCTGCAAATTTAATTCATTTACTCCGCGGAAACAACCCATGA

Coding sequence (CDS)

ATGGCGGCTCCATTTCCAGATGATTTCAAGTGCCCTATTTCTCTGGAAATAATGTCGGACCCTGTAATACTCTCCTCCGGCCACACCTTTGATCGTTCTTCAATCCAGCGCTGGCTCGACGCCGGTCACCGGACTTGCCCAATCACCCAATTGCCCCTTCCTCAAAACCCTTCCCTAATCCCTAACCATGCCCTCCGAAGCTTAATTTCAAATTTCAACCCTGTTTCACTTTCCAAGCCATTTCTCCCTCATCCGCCGCCTCAAACCCTAATCTCGATTCTCATCTCTCCTTCTTCCTCCCTCGATTCCAAGCTCGATTGCCTCAATCAACTCGCCAGGGTTTCAAAGCGCGATTCCGCTATGCGTCGAAGATTGACCGAGTCCGGTGCCGTCTCGGCCGTTCTTAAATGCGTCCGTTCTGACGATCCCAGCCTCCAAGAGAAGGCTCTCTCGCTCTTGCTTAATCTTAGTTTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAGGGAGCTATTGGTCTCACCGTGGCTGCTCTTCAAGCGAGGTCCGCCGATTGCAGAGCCGTAGCGGCCACGATGCTGACGAGCTTGGCGGTTGTGGAGGTTAACAAGGCTACAATTGGGGCATATCCTTATGCGGTTCGTTCTCTGGTTTATCTCTTACGCAACGGCAGCATCAGAGAGCAGAAGGAAGCTGCAACTGCGCTTTACGCCATTTGTTCATTCCCTGGGAACCGTGTGCGGGCTGTGGAATGTGGGGCCGTTCCCATTTTGCTTAAAATTGCAAATTCTGGGCTGGATAGAGCAGTGGAAGTTCTGGGGGTTTTGGCGAAGTGCAAGGAAGGTCGAGAAGAGATGCAACGGTTCAAGGGATGTGTGGAGATTTTGGGTCGTGTTTTGAGAAACGGAGGCCCAAGAGGAGTTCAATATGCTCTTCTAACTCTGACTTCCCTCTGCTGCCATTGCGAGCGAGTGTGTGTGGAGGCCAGAAGAGAAGGCGTTTTGGGAATCTGTATGACATTGATTGATGACGATAATGAAAAGATCAGAGCAAATGCTGCAAATTTAATTCATTTACTCCGCGGAAACAACCCATGA

Protein sequence

MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAICSFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLLRGNNP

Homology

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BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot
Match: O81902 (U-box domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUB8 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.5e-118
Identity = 227/369 (61.52%), Postives = 280/369 (75.88%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MA   P+DF+CPISLEIMSDPVIL SGHTFDR SIQ+W+D+G+RTCPIT+LPL + P LI
Sbjct: 1   MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLP-------HPPPQTLISILISPSSSLDSKLDCLNQLAR 120
           PNHALRSLI NF  VSL +   P       H   Q LIS L+S SSS  SKL+ L +L R
Sbjct: 61  PNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120

Query: 121 VSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIG 180
           ++KRDS++RR++TESGAV A L CV S +  LQEK+LSLLLNLSL+DDNKVGLVA+G I 
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIR 180

Query: 181 LTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAA 240
             V  L+  S DC+A+AAT+LTSLAVVEVNKATIG+YP A+ +LV LLR G+ RE+KE+A
Sbjct: 181 RIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESA 240

Query: 241 TALYAICSFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCV 300
           TALYA+CSFP NR R V+CG+VPIL++ A+SGL+RAVEVLG+L KC+ GREEM +  G V
Sbjct: 241 TALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVKCRGGREEMSKVSGFV 300

Query: 301 EILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANA 360
           E+L  VLRNG  +G+QY+L  L  LCC    +  E +REGV+ IC    D+++EKIR NA
Sbjct: 301 EVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKIRRNA 360

Query: 361 ANLIHLLRG 363
             L+H L G
Sbjct: 361 TILVHTLLG 369

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BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot
Match: Q5VRH9 (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-48
Identity = 135/377 (35.81%), Postives = 209/377 (55.44%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           PD+F+CPISLE+M DPVI+SSG T++RS IQ+WLD+GH+TCP TQ PL  + SL PN  L
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPL-SHTSLTPNFVL 288

Query: 66  RSLISNF---NPVSLSKPFLPHPPPQT----------LISILIS-PSSSLDSKLDCLNQL 125
           +SLIS +   N + L K        +           L+S++    S + D +     ++
Sbjct: 289 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 348

Query: 126 ARVSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGA 185
             ++KR+   R  + E+GA+  ++  + S DP  QE A++ LLNLS+ ++NK  +V   A
Sbjct: 349 RLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHA 408

Query: 186 IGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKE 245
           I   V  L+  S + R  AA  L SL+VV+ NK TIGA   A+  L+ LL +GS R +K+
Sbjct: 409 IPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGA-AGAIPPLINLLCDGSPRGKKD 468

Query: 246 AATALYAICSFPGNRVRAVECGAVPILLKI----ANSGLDRAVEVLGVLAKCKEGREEMQ 305
           AATA++ +C + GN+VRAV+ G V  L+          +D A+ +L +LA   EG+  + 
Sbjct: 469 AATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIA 528

Query: 306 RFKGCVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNE 365
           R +  +  L  V++ G PR  + A   L  LC       + A+  GV      L +   +
Sbjct: 529 RSEP-IPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTD 588

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BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot
Match: Q9SNC6 (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.9e-48
Identity = 128/373 (34.32%), Postives = 210/373 (56.30%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           PDDF+CPISLE+M DPVI+SSG T++R+ I++W++ GH TCP TQ  L  + +L PN+ L
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQAL-TSTTLTPNYVL 316

Query: 66  RSLISNFNPVSLSKPFLPHPPPQ---TLISILISPS--------------SSLDSKLDCL 125
           RSLI+ +   +  +P  P PP       +S   SP+               + + +    
Sbjct: 317 RSLIAQWCEANDIEP--PKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAA 376

Query: 126 NQLARVSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVA 185
            ++  ++KR++  R  + E+GA+  ++  + + D  +QE +++ LLNLS+ ++NK  +V+
Sbjct: 377 GEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVS 436

Query: 186 EGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIRE 245
            GAI   V  L+  S + R  AA  L SL+V++ NK TIGA   A+  LV LL  G+ R 
Sbjct: 437 AGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALG-AIPPLVVLLNEGTQRG 496

Query: 246 QKEAATALYAICSFPGNRVRAVECGAVPILLKI---ANSGL-DRAVEVLGVLAKCKEGRE 305
           +K+AATAL+ +C + GN+ +A+  G +P L ++     SG+ D A+ +L +L+   EG+ 
Sbjct: 497 KKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKA 556

Query: 306 EMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDD 358
            +      V  L   +R G PR  + A   L  LC    +  VEA++ G++G  + L  +
Sbjct: 557 IIGS-SDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGN 616

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BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot
Match: Q8VZ40 (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-45
Identity = 140/384 (36.46%), Postives = 219/384 (57.03%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           P+ F+CPISLE+M DPVI+S+G T++RSSIQ+WLDAGH+TCP +Q  L  +  L PN+ L
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETL-LHAGLTPNYVL 308

Query: 66  RSLIS---NFNPVSLSKPFLPHPPPQ-TLISILISPSSSLDSK----LDCLNQLAR---- 125
           +SLI+     N + L       P  Q +  +  I  SSS D      L  L +LA     
Sbjct: 309 KSLIALWCESNGIEL-------PQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTE 368

Query: 126 -----------VSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDN 185
                      ++KR+   R  + E+GA+  +++ + S DP  QE +++ LLNLS+++ N
Sbjct: 369 QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGN 428

Query: 186 KVGLVAEGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLR 245
           K  +V  GAI   V  L+  S + R  AA  L SL+V++ NK  IGA   A+++L+ LL 
Sbjct: 429 KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGA-AGAIQALISLLE 488

Query: 246 NGSIREQKEAATALYAICSFPGNRVRAVECGAV-PI--LLKIANSGL-DRAVEVLGVLAK 305
            G+ R +K+AATA++ +C + GN+ RAV+ G V P+  LLK A  G+ D A+ +L +L+ 
Sbjct: 489 EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILST 548

Query: 306 CKEGREEMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCC-HCERVCVEARREGVLGI 362
            +EG+  +   +  + +L  ++R G PR  + A   L  LC  + ER+ V AR  G    
Sbjct: 549 NQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNV-AREVGADVA 608

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BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot
Match: Q8GUG9 (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 4.8e-45
Identity = 124/370 (33.51%), Postives = 206/370 (55.68%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           P DF CP+SLE+M DPVI+++G T++R+ IQRW+D G+ TCP TQ  L +N +L PN+ L
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKL-ENFTLTPNYVL 301

Query: 66  RSLISNF-------NPVSLSKPFLPHPPPQTLISILIS--PSSSLDSKLDCLNQLARVSK 125
           RSLIS +        P         +    ++I  L+    S S + + + ++++  +SK
Sbjct: 302 RSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 361

Query: 126 RDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTV 185
           R +  R  + E+GA+  ++  + S+D + QE A++ +LNLS+ ++NK  ++  GA+   V
Sbjct: 362 RSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIV 421

Query: 186 AALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATAL 245
             L+A + + R  AA  L SL++ + NK  IG    A+ +LV LL NG+ R +K+AATAL
Sbjct: 422 QVLRAGTMEARENAAATLFSLSLADENKIIIGG-SGAIPALVDLLENGTPRGKKDAATAL 481

Query: 246 YAICSFPGNRVRAVECGAVPILLKIANSG-----LDRAVEVLGVLAKCKEGREEMQRFKG 305
           + +C + GN+ RAV  G V  L+K+ +       +D A+ +L VLA  ++ +  + +   
Sbjct: 482 FNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANT 541

Query: 306 CVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRA 362
              ++G +L+    R  + A   L SLC       +   R G +   M L  +  E+ + 
Sbjct: 542 LPALIG-ILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKR 601

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BLAST of Lsi01G003730 vs. ExPASy TrEMBL
Match: A0A0A0KHY9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G516760 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.6e-192
Identity = 348/365 (95.34%), Postives = 357/365 (97.81%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           +RRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ
Sbjct: 121 VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNR+R VECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQ FKGCVEIL RVL
Sbjct: 241 SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTL SLCCHCER+CVEARREG+LGICMTLIDDD+EKIRANAANLIH+L
Sbjct: 301 RNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           +GN P
Sbjct: 361 KGNTP 365

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BLAST of Lsi01G003730 vs. ExPASy TrEMBL
Match: A0A5A7UEY0 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006950 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.6e-192
Identity = 348/365 (95.34%), Postives = 356/365 (97.53%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           +RRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGL VAALQ
Sbjct: 121 VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLIVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNR+R VECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQ FKGCVEIL RVL
Sbjct: 241 SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTLTSLCCHCER+C EARREGVLGICMTLIDDD+EKIRANAANLIH+L
Sbjct: 301 RNGSPRGVQYALLTLTSLCCHCERLCAEARREGVLGICMTLIDDDSEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           +GN P
Sbjct: 361 KGNTP 365

[Close]

BLAST of Lsi01G003730 vs. ExPASy TrEMBL
Match: A0A1S3B0K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484570 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.6e-192
Identity = 348/365 (95.34%), Postives = 356/365 (97.53%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           +RRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGL VAALQ
Sbjct: 121 VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLIVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNR+R VECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQ FKGCVEIL RVL
Sbjct: 241 SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTLTSLCCHCER+C EARREGVLGICMTLIDDD+EKIRANAANLIH+L
Sbjct: 301 RNGSPRGVQYALLTLTSLCCHCERLCAEARREGVLGICMTLIDDDSEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           +GN P
Sbjct: 361 KGNTP 365

[Close]

BLAST of Lsi01G003730 vs. ExPASy TrEMBL
Match: A0A6J1IPS0 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111477712 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.3e-188
Identity = 342/364 (93.96%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNP+LI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPNLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHP PQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPSPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           MRRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIG TVAALQ
Sbjct: 121 MRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGHTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARS DCRAVAATMLTSLAVVEVNKATIGAYP+AVRSLV LLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSPDCRAVAATMLTSLAVVEVNKATIGAYPHAVRSLVCLLRNGNYREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFP NR+RAVECG VPILLKIANSGLDRAVEVLG+LAKC+EGREEMQRFKGCVEILG VL
Sbjct: 241 SFPRNRLRAVECGVVPILLKIANSGLDRAVEVLGLLAKCREGREEMQRFKGCVEILGCVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQY+LLTL+SLCCHCER+CVEARREGVLGICMTLIDD+NEKIRANAANLIH+L
Sbjct: 301 RNGAPRGVQYSLLTLSSLCCHCERLCVEARREGVLGICMTLIDDNNEKIRANAANLIHIL 360

Query: 361 RGNN 365
           RGNN
Sbjct: 361 RGNN 364

[Close]

BLAST of Lsi01G003730 vs. ExPASy TrEMBL
Match: A0A6J1GE93 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453362 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 339/364 (93.13%), Postives = 352/364 (96.70%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNP+LI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPNLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLI+NFNPVSLSKPFLPHP PQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLIANFNPVSLSKPFLPHPSPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           MRRRLTESGAVSAVLKCV SDDP LQEK LSLLLNLSLDDDNKVGLVAEGAIG TVAALQ
Sbjct: 121 MRRRLTESGAVSAVLKCVGSDDPRLQEKGLSLLLNLSLDDDNKVGLVAEGAIGHTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARS DCRAVAATMLTSLAVVEVNKATIGAYP+AVRSLV LLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSPDCRAVAATMLTSLAVVEVNKATIGAYPHAVRSLVCLLRNGNYREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFP NR+RAVECG VPILLKIANSGLDRAVEVLG+LAKC+EGREEMQRFKGCVEILG VL
Sbjct: 241 SFPRNRLRAVECGVVPILLKIANSGLDRAVEVLGLLAKCREGREEMQRFKGCVEILGCVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTL+SLCCHCER+CVEARREGVLGIC+TLIDD+NEKIRANAANLIH+L
Sbjct: 301 RNGAPRGVQYALLTLSSLCCHCERLCVEARREGVLGICITLIDDNNEKIRANAANLIHIL 360

Query: 361 RGNN 365
           RGNN
Sbjct: 361 RGNN 364

[Close]

BLAST of Lsi01G003730 vs. NCBI nr
Match: XP_038883486.1 (U-box domain-containing protein 8 [Benincasa hispida])

HSP 1 Score: 695.3 bits (1793), Expect = 2.9e-196
Identity = 356/365 (97.53%), Postives = 361/365 (98.90%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           MRRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ
Sbjct: 121 MRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKC+EGREEMQRFKGCVEILG VL
Sbjct: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCREGREEMQRFKGCVEILGCVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNGGPRGVQYALLTL SLCCHCER+CVEARREGVLGICMTLIDDDNEKIRANAANLIH+L
Sbjct: 301 RNGGPRGVQYALLTLASLCCHCERLCVEARREGVLGICMTLIDDDNEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           RGNNP
Sbjct: 361 RGNNP 365

[Close]

BLAST of Lsi01G003730 vs. NCBI nr
Match: XP_004134742.1 (U-box domain-containing protein 8 [Cucumis sativus] >KGN49168.1 hypothetical protein Csa_003225 [Cucumis sativus])

HSP 1 Score: 681.8 bits (1758), Expect = 3.3e-192
Identity = 348/365 (95.34%), Postives = 357/365 (97.81%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           +RRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ
Sbjct: 121 VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNR+R VECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQ FKGCVEIL RVL
Sbjct: 241 SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTL SLCCHCER+CVEARREG+LGICMTLIDDD+EKIRANAANLIH+L
Sbjct: 301 RNGSPRGVQYALLTLASLCCHCERLCVEARREGILGICMTLIDDDSEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           +GN P
Sbjct: 361 KGNTP 365

[Close]

BLAST of Lsi01G003730 vs. NCBI nr
Match: XP_008439933.1 (PREDICTED: U-box domain-containing protein 8 [Cucumis melo] >KAA0052736.1 U-box domain-containing protein 8 [Cucumis melo var. makuwa] >TYK13087.1 U-box domain-containing protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 680.2 bits (1754), Expect = 9.5e-192
Identity = 348/365 (95.34%), Postives = 356/365 (97.53%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           +RRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGL VAALQ
Sbjct: 121 VRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLIVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGNNREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFPGNR+R VECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQ FKGCVEIL RVL
Sbjct: 241 SFPGNRLRVVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQWFKGCVEILSRVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTLTSLCCHCER+C EARREGVLGICMTLIDDD+EKIRANAANLIH+L
Sbjct: 301 RNGSPRGVQYALLTLTSLCCHCERLCAEARREGVLGICMTLIDDDSEKIRANAANLIHIL 360

Query: 361 RGNNP 366
           +GN P
Sbjct: 361 KGNTP 365

[Close]

BLAST of Lsi01G003730 vs. NCBI nr
Match: XP_022977363.1 (U-box domain-containing protein 8-like [Cucurbita maxima])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 342/364 (93.96%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNP+LI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPNLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHP PQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPSPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           MRRRLTESGAVSAVLKCV SDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIG TVAALQ
Sbjct: 121 MRRRLTESGAVSAVLKCVGSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGHTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARS DCRAVAATMLTSLAVVEVNKATIGAYP+AVRSLV LLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSPDCRAVAATMLTSLAVVEVNKATIGAYPHAVRSLVCLLRNGNYREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFP NR+RAVECG VPILLKIANSGLDRAVEVLG+LAKC+EGREEMQRFKGCVEILG VL
Sbjct: 241 SFPRNRLRAVECGVVPILLKIANSGLDRAVEVLGLLAKCREGREEMQRFKGCVEILGCVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQY+LLTL+SLCCHCER+CVEARREGVLGICMTLIDD+NEKIRANAANLIH+L
Sbjct: 301 RNGAPRGVQYSLLTLSSLCCHCERLCVEARREGVLGICMTLIDDNNEKIRANAANLIHIL 360

Query: 361 RGNN 365
           RGNN
Sbjct: 361 RGNN 364

[Close]

BLAST of Lsi01G003730 vs. NCBI nr
Match: XP_023544487.1 (U-box domain-containing protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 341/364 (93.68%), Postives = 351/364 (96.43%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MAAP+PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNP+LI
Sbjct: 1   MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPNLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLPHPPPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120
           PNHALRSLISNFNPVSLSKPFLPHP PQTLISILISPSSSLDSKLDCLNQLARVSKRDSA
Sbjct: 61  PNHALRSLISNFNPVSLSKPFLPHPSPQTLISILISPSSSLDSKLDCLNQLARVSKRDSA 120

Query: 121 MRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTVAALQ 180
           MRRRLTESGAVSAVLKCV SDDP LQEK LSLLLNLSLDDDNKVGLVAEGAIG TVAALQ
Sbjct: 121 MRRRLTESGAVSAVLKCVGSDDPRLQEKGLSLLLNLSLDDDNKVGLVAEGAIGHTVAALQ 180

Query: 181 ARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATALYAIC 240
           ARS DCRAVAATMLTSLAVVEVNKATIGAYP+AVRSLV LLRNG+ REQKEAATALYAIC
Sbjct: 181 ARSPDCRAVAATMLTSLAVVEVNKATIGAYPHAVRSLVCLLRNGNYREQKEAATALYAIC 240

Query: 241 SFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCVEILGRVL 300
           SFP NR+RAVECG VPILLKIANSGLDRAVEVLG+LAKC+EGREEMQRFKGCVEILG VL
Sbjct: 241 SFPRNRLRAVECGVVPILLKIANSGLDRAVEVLGLLAKCREGREEMQRFKGCVEILGCVL 300

Query: 301 RNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANAANLIHLL 360
           RNG PRGVQYALLTL+SLCCHCER CVEARREGVLGICMTLIDD+NEKIRANAANLIH+L
Sbjct: 301 RNGAPRGVQYALLTLSSLCCHCERQCVEARREGVLGICMTLIDDNNEKIRANAANLIHIL 360

Query: 361 RGNN 365
           RGNN
Sbjct: 361 RGNN 364

[Close]

BLAST of Lsi01G003730 vs. TAIR 10
Match: AT4G21350.1 (plant U-box 8 )

HSP 1 Score: 425.6 bits (1093), Expect = 3.9e-119
Identity = 227/369 (61.52%), Postives = 280/369 (75.88%), Query Frame = 0


Query: 1   MAAPFPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLI 60
           MA   P+DF+CPISLEIMSDPVIL SGHTFDR SIQ+W+D+G+RTCPIT+LPL + P LI
Sbjct: 1   MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60

Query: 61  PNHALRSLISNFNPVSLSKPFLP-------HPPPQTLISILISPSSSLDSKLDCLNQLAR 120
           PNHALRSLI NF  VSL +   P       H   Q LIS L+S SSS  SKL+ L +L R
Sbjct: 61  PNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120

Query: 121 VSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIG 180
           ++KRDS++RR++TESGAV A L CV S +  LQEK+LSLLLNLSL+DDNKVGLVA+G I 
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIR 180

Query: 181 LTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAA 240
             V  L+  S DC+A+AAT+LTSLAVVEVNKATIG+YP A+ +LV LLR G+ RE+KE+A
Sbjct: 181 RIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESA 240

Query: 241 TALYAICSFPGNRVRAVECGAVPILLKIANSGLDRAVEVLGVLAKCKEGREEMQRFKGCV 300
           TALYA+CSFP NR R V+CG+VPIL++ A+SGL+RAVEVLG+L KC+ GREEM +  G V
Sbjct: 241 TALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVKCRGGREEMSKVSGFV 300

Query: 301 EILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRANA 360
           E+L  VLRNG  +G+QY+L  L  LCC    +  E +REGV+ IC    D+++EKIR NA
Sbjct: 301 EVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKIRRNA 360

Query: 361 ANLIHLLRG 363
             L+H L G
Sbjct: 361 TILVHTLLG 369

[Close]

BLAST of Lsi01G003730 vs. TAIR 10
Match: AT3G46510.1 (plant U-box 13 )

HSP 1 Score: 192.6 bits (488), Expect = 5.6e-49
Identity = 128/373 (34.32%), Postives = 210/373 (56.30%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           PDDF+CPISLE+M DPVI+SSG T++R+ I++W++ GH TCP TQ  L  + +L PN+ L
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQAL-TSTTLTPNYVL 316

Query: 66  RSLISNFNPVSLSKPFLPHPPPQ---TLISILISPS--------------SSLDSKLDCL 125
           RSLI+ +   +  +P  P PP       +S   SP+               + + +    
Sbjct: 317 RSLIAQWCEANDIEP--PKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAA 376

Query: 126 NQLARVSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVA 185
            ++  ++KR++  R  + E+GA+  ++  + + D  +QE +++ LLNLS+ ++NK  +V+
Sbjct: 377 GEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVS 436

Query: 186 EGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIRE 245
            GAI   V  L+  S + R  AA  L SL+V++ NK TIGA   A+  LV LL  G+ R 
Sbjct: 437 AGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALG-AIPPLVVLLNEGTQRG 496

Query: 246 QKEAATALYAICSFPGNRVRAVECGAVPILLKI---ANSGL-DRAVEVLGVLAKCKEGRE 305
           +K+AATAL+ +C + GN+ +A+  G +P L ++     SG+ D A+ +L +L+   EG+ 
Sbjct: 497 KKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKA 556

Query: 306 EMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDD 358
            +      V  L   +R G PR  + A   L  LC    +  VEA++ G++G  + L  +
Sbjct: 557 IIGS-SDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGN 616

[Close]

BLAST of Lsi01G003730 vs. TAIR 10
Match: AT3G54850.1 (plant U-box 14 )

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 140/384 (36.46%), Postives = 219/384 (57.03%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           P+ F+CPISLE+M DPVI+S+G T++RSSIQ+WLDAGH+TCP +Q  L  +  L PN+ L
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETL-LHAGLTPNYVL 308

Query: 66  RSLIS---NFNPVSLSKPFLPHPPPQ-TLISILISPSSSLDSK----LDCLNQLAR---- 125
           +SLI+     N + L       P  Q +  +  I  SSS D      L  L +LA     
Sbjct: 309 KSLIALWCESNGIEL-------PQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTE 368

Query: 126 -----------VSKRDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDN 185
                      ++KR+   R  + E+GA+  +++ + S DP  QE +++ LLNLS+++ N
Sbjct: 369 QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGN 428

Query: 186 KVGLVAEGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLR 245
           K  +V  GAI   V  L+  S + R  AA  L SL+V++ NK  IGA   A+++L+ LL 
Sbjct: 429 KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGA-AGAIQALISLLE 488

Query: 246 NGSIREQKEAATALYAICSFPGNRVRAVECGAV-PI--LLKIANSGL-DRAVEVLGVLAK 305
            G+ R +K+AATA++ +C + GN+ RAV+ G V P+  LLK A  G+ D A+ +L +L+ 
Sbjct: 489 EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILST 548

Query: 306 CKEGREEMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCC-HCERVCVEARREGVLGI 362
            +EG+  +   +  + +L  ++R G PR  + A   L  LC  + ER+ V AR  G    
Sbjct: 549 NQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNV-AREVGADVA 608

[Close]

BLAST of Lsi01G003730 vs. TAIR 10
Match: AT1G23030.1 (ARM repeat superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-46
Identity = 124/370 (33.51%), Postives = 206/370 (55.68%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           P DF CP+SLE+M DPVI+++G T++R+ IQRW+D G+ TCP TQ  L +N +L PN+ L
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKL-ENFTLTPNYVL 301

Query: 66  RSLISNF-------NPVSLSKPFLPHPPPQTLISILIS--PSSSLDSKLDCLNQLARVSK 125
           RSLIS +        P         +    ++I  L+    S S + + + ++++  +SK
Sbjct: 302 RSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 361

Query: 126 RDSAMRRRLTESGAVSAVLKCVRSDDPSLQEKALSLLLNLSLDDDNKVGLVAEGAIGLTV 185
           R +  R  + E+GA+  ++  + S+D + QE A++ +LNLS+ ++NK  ++  GA+   V
Sbjct: 362 RSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIV 421

Query: 186 AALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGSIREQKEAATAL 245
             L+A + + R  AA  L SL++ + NK  IG    A+ +LV LL NG+ R +K+AATAL
Sbjct: 422 QVLRAGTMEARENAAATLFSLSLADENKIIIGG-SGAIPALVDLLENGTPRGKKDAATAL 481

Query: 246 YAICSFPGNRVRAVECGAVPILLKIANSG-----LDRAVEVLGVLAKCKEGREEMQRFKG 305
           + +C + GN+ RAV  G V  L+K+ +       +D A+ +L VLA  ++ +  + +   
Sbjct: 482 FNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANT 541

Query: 306 CVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTLIDDDNEKIRA 362
              ++G +L+    R  + A   L SLC       +   R G +   M L  +  E+ + 
Sbjct: 542 LPALIG-ILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKR 601

[Close]

BLAST of Lsi01G003730 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 )

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-46
Identity = 125/377 (33.16%), Postives = 214/377 (56.76%), Query Frame = 0


Query: 6   PDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPSLIPNHAL 65
           P++F+CPISLE+M+DPVI+SSG T++R  I++WL+ GH TCP TQ  L  +  + PN+ L
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSD-IMTPNYVL 316

Query: 66  RSLISNF---NPVSLSK-PFLPHPPPQTLIS--------------ILISPSSSLDSKLDC 125
           RSLI+ +   N +   K P +  P  +   S              +L   S   + +   
Sbjct: 317 RSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSA 376

Query: 126 LNQLARVSKRDSAMRRRLTESGAVSAVLKCVR-SDDPSLQEKALSLLLNLSLDDDNKVGL 185
             ++  ++K+++  R  +  SGA+  ++  +  S+D   QE A++ +LNLS+  +NK  +
Sbjct: 377 AGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKI 436

Query: 186 V-AEGAIGLTVAALQARSADCRAVAATMLTSLAVVEVNKATIGAYPYAVRSLVYLLRNGS 245
           V + GA+   V  LQ  S + R  AA  L SL+V++ NK TIGA   A+  LV LL  GS
Sbjct: 437 VYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGA-AGAIPPLVTLLSEGS 496

Query: 246 IREQKEAATALYAICSFPGNRVRAVECGAVPILLKI---ANSGL-DRAVEVLGVLAKCKE 305
            R +K+AATAL+ +C F GN+ +AV  G VP+L+++     SG+ D ++ +L +L+   +
Sbjct: 497 QRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPD 556

Query: 306 GREEMQRFKGCVEILGRVLRNGGPRGVQYALLTLTSLCCHCERVCVEARREGVLGICMTL 359
           G+ E+      V +L   +R+G PR  + +   L  LC   ++  +EA++ G++ + + +
Sbjct: 557 GKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEM 616

The following BLAST results are available for this feature:

BLAST of Lsi01G003730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81902	5.5e-118	61.52	U-box domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUB8 PE=2 S...	[more]
Q5VRH9	2.1e-48	35.81	U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
Q9SNC6	7.9e-48	34.32	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]
Q8VZ40	1.6e-45	36.46	U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1...	[more]
Q8GUG9	4.8e-45	33.51	U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2...	[more]

BLAST of Lsi01G003730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHY9	1.6e-192	95.34	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G516760 PE...	[more]
A0A5A7UEY0	4.6e-192	95.34	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B0K2	4.6e-192	95.34	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484570 PE=4 ...	[more]
A0A6J1IPS0	5.3e-188	93.96	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111477712 P...	[more]
A0A6J1GE93	1.7e-186	93.13	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453362...	[more]

BLAST of Lsi01G003730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883486.1	2.9e-196	97.53	U-box domain-containing protein 8 [Benincasa hispida]	[more]
XP_004134742.1	3.3e-192	95.34	U-box domain-containing protein 8 [Cucumis sativus] >KGN49168.1 hypothetical pro...	[more]
XP_008439933.1	9.5e-192	95.34	PREDICTED: U-box domain-containing protein 8 [Cucumis melo] >KAA0052736.1 U-box ...	[more]
XP_022977363.1	1.1e-187	93.96	U-box domain-containing protein 8-like [Cucurbita maxima]	[more]
XP_023544487.1	1.2e-186	93.68	U-box domain-containing protein 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G003730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21350.1	3.9e-119	61.52	plant U-box 8	[more]
AT3G46510.1	5.6e-49	34.32	plant U-box 13	[more]
AT3G54850.1	1.2e-46	36.46	plant U-box 14	[more]
AT1G23030.1	3.4e-46	33.51	ARM repeat superfamily protein	[more]
AT2G28830.1	3.4e-46	33.16	PLANT U-BOX 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 118..158 e-value: 0.12 score: 21.5 coord: 159..199 e-value: 78.0 score: 6.3 coord: 279..320 e-value: 100.0 score: 5.4
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 129..171 score: 9.2924
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 8..72 e-value: 1.1E-32 score: 124.6
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 6..72 e-value: 1.8E-20 score: 72.9
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 4..79 score: 34.579609
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 269..365 e-value: 1.7E-11 score: 45.2 coord: 84..268 e-value: 4.2E-25 score: 90.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 5..76 e-value: 4.5E-28 score: 99.1
None	No IPR available	PANTHER	PTHR23315:SF112	U-BOX DOMAIN-CONTAINING PROTEIN 8	coord: 1..361
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 1..361
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 9..50 e-value: 1.5671E-25 score: 95.3782
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 3..72
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 88..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G003730.1	Lsi01G003730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity