Lsi01G003600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G003600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	vesicle-associated protein 4-2
Location	chr01: 3193871 .. 3197041 (-)
RNA-Seq Expression	Lsi01G003600
Synteny	Lsi01G003600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATCAGTTTCCCCCGCTAATCATGAACCCAAGGACAACAACATTCAATAAAAAGCAAAAACGCCCCTTCCGGACCTCAACTCTTTTTCTTCACTTCAATTTAATTCTCTTCAGTTCCGCTCTATCTCTGATTCTCTCTCATCCTTCTCTCTCTCTCCACCTCGTCTTCCGCTTTCATTGAAGTAAAAAGTGACCCCTCCTCCTATTAACGGCCACCTAAAACTGCCGCGCCTGGTGCTCGCCGTGAATTTCCGAAGGCCGACGACGAGTTTTTTCACCGTCCGATGCTCTGATTGAGCTCACGGAGGTTTCAATGATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCTAGTGGCGCTACTACTTCGTCTCGTACCTCCCATCAAACTCATCCGCCTGTGGAGGGGACGAATCCTCATACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTTCCGACGCGGCGTCGGCTCAAGCTCGATCCATCGAATAAGCTTTTCTTTCCTTGTGAGTTTTTGCTTTTTATTCGTCAAATGAATTTAGTTCGATTATTCTTAGTTGGATTTGTTCTGCTCATTCTAGGTCTAGTGCGTATGATCTCGATCTGTTGATGACTTTTAACTATCAGTTGCATTTCGGTTTTAGAAAGTTTGAATTCTCTAATTCATTCGATTTTCTGGTTGATCTTAGTTTTAATTGATTCGTCTTTCTGTTTTTGAAGATGAACCTGGCAAGCAGGTCAGGAGTGCCATTGGAATAAAAAATACAAGCAAATCTTATGTTGCATTCAAGGTACGAATGAACGTCCTATTTGACGCATATCGTTTTGCATCTTTGTATCCGTATTTCGAGCATACAGTTTTTTTTTTGTTTTACAGTTTTGTTGATCAGTGGACAGTGGACAGTGAGTTCGTGTGCTAGTATTAATAGCTATAATTTCCAAAAATAGCTCTCTTCCTAATACTGTCTGTAAAATTCGGCTTATTGTGATTATTGATTTATTTTGTTTAAACTTTCGTATAGTTCCAAACAACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCGATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGGTAAACTATTTTCCTGGATTGCTTATCCATTTTGTCTCTTTTACTAGGTTCATTTGATCAATAATCTTGCTTATTTTCTTCTATCATCTTCTTATTAATTAAAATTTTGTAATTGCTGTCGATGTTGAATGGATCTTCTAGTTTTCAAGTTTGTTGAGGTTCCCGAAAGCAACGAGAAACCTGTGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACAAATGGATTATGTGCCTGAACTGGTGCGTCTCAACCTTCCCTTAGCTTGCTATTTCCAGTTATTTACGTTTTGTGGGTGTTTTATTCAACAAGTTAATTAGGTCTCAGTGCTAGAAATATTCAGTCTTGTTTCACTTTAGCTTGTTGATGATTCCTTAAGAGGAAATGGAATTGTCAATATCTAGACTCAAGAGTAGTTTCCTTTCAGTTGACACTAGTCAAAATTAGAGGGCTATGTTCATCTGTGATCCAGGTCTGGATGCCGTTTTAATTCACCAGGGGCCACACTGAAAGGAGTATTGAATCCGCACAAGAGTTTAAGTTGATAATTTGATGACCAGGAAACTTTTGTTGGATAGTCTCCTTATCGGAATATGCATCACATACCATCGCTGGCCATCCTATTGCATGCTTTAGTTTTGTTTCTAAGAGAGTTTTGACCATTTTCTTTTACTGGTTAGGACGTGTACTGAAAAGTCCATTAAGGTTATATCCAAATTTTGTTCTGGTTTGAACATTTAATTAAAAAATTTTGATCTTCTCTTGAATGGTGTAAATGCTTCTTCCCGACTTTTACAGATTAGTTTAAATGACCCCAGTTTTGTTTTCCCGCCCCCCTGTGTATTTCATTTACCTGATCTCATTTAAAGAAACAATAAATACTTCAATATCAAATTTATGAGTGCGACTTCATTCACTCATTCCTTGTTTTAAAATGGCCGTAAAACTCCAGAGTCTATGCCTTTTCTCGCTGGCTAGAAAATGCAAGTAAAATAAGTACTGATCAAACATTCTTTTTCTATCTTGATCTAGTTTGATGAACAGAAGGACCAAGTGTCTATAGAACAGATATTGCGGGTTGTTTTCCTGGATCCAGAACGTCCCAATGCAGTAAGTTGGCTTCTTGGATGATAAGAATCCAGATTTTGTGAGATATTGAAAATCATTTTAGATTTTTGTCCTTTTTTGGAATGAGAGATTTTGTGATGAATATAATTAGGAACTCTTTGTTTGGATGTTCACCGCAAAGAAAAAGAAAATAAGAAATTTACTAGTACAGCCTCCATCTAGTTTGAAATCTTGTGAATTTGAGGCATAAGTAACCGCTTTCATATCTGATTTTCTGAAGGCTTTAGAAAAATTGAAGCGCCAATTAGCCGAGGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAATCAGGCCCAAAAATAATTGGAGAAGGGCTGGTGATAGACGAATGGGTGAGTTAATCTTTTAGTTTGGTTATGCAGATCTTGTAATATTTTGAATGGAATGAATATCACTCTTAATGTTACTTCCATTTTGTGTTTGTTCAGAAAGAACGGAGGGAAAGATATCTAGCGAAACAGCAAGTTGAAGGGGTAGACTCTGTATAGGGTTTGGTTTCAGTTTTTCCGGCAATGCTTCTGTAATTTGAAAGGGATTTCCAAATGAACTCTCGAGGATCAATTCTACCCTTAAAAAGTCGTGTAATCTTTTTCGTATATTATCCAAAAATATTGTTTAGGTGAAGATGAACTTATTTTATTTTCATTGAACGAAAACCCCCATGAGGTCAAGTCTTGTGTAATTTGAGACACCAACTGGGATTTACCCTATTATATGTAGATAAAGATTGATTTCTTTCTCGCTAATAAAATGTCTGAGGAGGAATGTATCCAAGAAATCCACTTGTAAAAACTTATTCTATTAGCCAATATGTTGAAAATTTGATTAAAGCATAAAAATCTGAAAATTTTATTTGCAATTT

mRNA sequence

CGATCAGTTTCCCCCGCTAATCATGAACCCAAGGACAACAACATTCAATAAAAAGCAAAAACGCCCCTTCCGGACCTCAACTCTTTTTCTTCACTTCAATTTAATTCTCTTCAGTTCCGCTCTATCTCTGATTCTCTCTCATCCTTCTCTCTCTCTCCACCTCGTCTTCCGCTTTCATTGAAGTAAAAAGTGACCCCTCCTCCTATTAACGGCCACCTAAAACTGCCGCGCCTGGTGCTCGCCGTGAATTTCCGAAGGCCGACGACGAGTTTTTTCACCGTCCGATGCTCTGATTGAGCTCACGGAGGTTTCAATGATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCTAGTGGCGCTACTACTTCGTCTCGTACCTCCCATCAAACTCATCCGCCTGTGGAGGGGACGAATCCTCATACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTTCCGACGCGGCGTCGGCTCAAGCTCGATCCATCGAATAAGCTTTTCTTTCCTTATGAACCTGGCAAGCAGGTCAGGAGTGCCATTGGAATAAAAAATACAAGCAAATCTTATGTTGCATTCAAGTTCCAAACAACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCGATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGTTTTCAAGTTTGTTGAGGTTCCCGAAAGCAACGAGAAACCTGTGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACAAATGGATTATGTGCCTGAACTGGCTTTAGAAAAATTGAAGCGCCAATTAGCCGAGGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAATCAGGCCCAAAAATAATTGGAGAAGGGCTGGTGATAGACGAATGGAAAGAACGGAGGGAAAGATATCTAGCGAAACAGCAAGTTGAAGGGGTAGACTCTGTATAGGGTTTGGTTTCAGTTTTTCCGGCAATGCTTCTGTAATTTGAAAGGGATTTCCAAATGAACTCTCGAGGATCAATTCTACCCTTAAAAAGTCGTGTAATCTTTTTCGTATATTATCCAAAAATATTGTTTAGGTGAAGATGAACTTATTTTATTTTCATTGAACGAAAACCCCCATGAGGTCAAGTCTTGTGTAATTTGAGACACCAACTGGGATTTACCCTATTATATGTAGATAAAGATTGATTTCTTTCTCGCTAATAAAATGTCTGAGGAGGAATGTATCCAAGAAATCCACTTGTAAAAACTTATTCTATTAGCCAATATGTTGAAAATTTGATTAAAGCATAAAAATCTGAAAATTTTATTTGCAATTT

Coding sequence (CDS)

ATGATGGCTATTGATGATCAAAAGTCAACGTCCGATGGAAAGGTCTGGGGTTTTTTGAAGCAAACGTTTAGGCATTCCGCTAGTGGCGCTACTACTTCGTCTCGTACCTCCCATCAAACTCATCCGCCTGTGGAGGGGACGAATCCTCATACCTCCGCCTCTGTCTCCTCCGTTGCTAGGTCGCTGCTTCCGACGCGGCGTCGGCTCAAGCTCGATCCATCGAATAAGCTTTTCTTTCCTTATGAACCTGGCAAGCAGGTCAGGAGTGCCATTGGAATAAAAAATACAAGCAAATCTTATGTTGCATTCAAGTTCCAAACAACTGCACCAAAAAGCTGCTTCATGCGTCCTCCTGGTGCGATTCTTGCCCCTGGAGAGAGCATCATAGCCACTGTTTTCAAGTTTGTTGAGGTTCCCGAAAGCAACGAGAAACCTGTGGATCAAAAGAACAACAGGGTTAAGTTTAAAATTATGAGCTTGAAGGTGAAAGGACAAATGGATTATGTGCCTGAACTGGCTTTAGAAAAATTGAAGCGCCAATTAGCCGAGGCCGATGCTGCACTTGAGGCACGCAAGAAACCACCAGAAGAATCAGGCCCAAAAATAATTGGAGAAGGGCTGGTGATAGACGAATGGAAAGAACGGAGGGAAAGATATCTAGCGAAACAGCAAGTTGAAGGGGTAGACTCTGTATAG

Protein sequence

MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKERRERYLAKQQVEGVDSV

Homology

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BLAST of Lsi01G003600 vs. ExPASy Swiss-Prot
Match: Q8VYN2 (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.3e-83
Identity = 183/296 (61.82%), Postives = 205/296 (69.26%), Query Frame = 0


Query: 2   MAIDDQKSTSDGK-VWGFLKQTFRHSA---------------SGATTSSRTS-------- 61
           M + ++K TSDGK  WGF K  FR+S+               SGA++SS +S        
Sbjct: 1   MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60

Query: 62  -----HQTHPPVEGTNPH-----------TSASVSSVARSLLPTRRRLKLDPSNKLFFPY 121
                HQ H  +    PH            S SVSSVA+S LPT+RRLKLDPS KL+FPY
Sbjct: 61  HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120

Query: 122 EPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPES 181
           EPGKQVRSAI IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIATVFKFVE PE+
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180

Query: 182 NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL--------------------------ALE 232
           NEKP+DQ+ +RVKFKIMSLKVKG MDYVPEL                          ALE
Sbjct: 181 NEKPMDQR-SRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALE 240

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BLAST of Lsi01G003600 vs. ExPASy Swiss-Prot
Match: Q8LPQ7 (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-70
Identity = 169/288 (58.68%), Postives = 191/288 (66.32%), Query Frame = 0


Query: 2   MAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTS-------------------HQTH- 61
           MA+ + KS SDG+ WG  K  FR+S S A ++S +S                   HQ+  
Sbjct: 1   MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60

Query: 62  -----PPVE---GTNPHTSA----SVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQVRS 121
                PPV    G N H SA    S+SSVARSLLPT+RRLKLDPS KL+FPYEPGKQVRS
Sbjct: 61  FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120

Query: 122 AIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPESNEKPVDQK 181
           AI IKNTSKS+VAFKFQTT PKSCFMRP GAILAPGE IIATVFKFVE PE+NEKP++QK
Sbjct: 121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180

Query: 182 NNRVKFKIMSLKVKGQMDYVPEL--------------------------ALEKLKRQLAE 231
           +  VKFKIMSLK+K   DY+PEL                           +EKLK QLAE
Sbjct: 181 SG-VKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAE 240

[Close]

BLAST of Lsi01G003600 vs. ExPASy Swiss-Prot
Match: Q1ECE0 (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.0e-69
Identity = 139/205 (67.80%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 54  SVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSC 113
           ++SSVARSLLP RRRL+LDPS+ L+FPYEPGKQVRSAI +KNTSKS+ AFKFQTTAPKSC
Sbjct: 62  TMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSC 121

Query: 114 FMRPPGAILAPGESIIATVFKFVEVPESNEK-PVDQKNNRVKFKIMSLKVKGQMDYVPEL 173
           +MRPPG +LAPGES+ ATVFKFVE PE+NEK P++QK ++VKFKIMSLKVK  ++YVPEL
Sbjct: 122 YMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQK-SKVKFKIMSLKVKPGVEYVPEL 181

Query: 174 --------------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEG 232
                                     ALEKLKRQL EA+AA+EARKKPP E+GP+++GEG
Sbjct: 182 FDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRVVGEG 241

[Close]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL
Match: A0A1S3AZX4 (vesicle-associated protein 4-2 OS=Cucumis melo OX=3656 GN=LOC103484561 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117
Identity = 226/257 (87.94%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMA++DQKSTSDGKVWGFLKQTFRHS +GATTSSRTSHQTHPPV+GTNPHTSASVSSVAR
Sbjct: 1   MMAVEDQKSTSDGKVWGFLKQTFRHSTTGATTSSRTSHQTHPPVDGTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL
Match: A0A0A0KN70 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516890 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 226/257 (87.94%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMA++DQKSTSDGKVWGFLKQTF+HS  GATTSSRTSHQTHPPVEGTNPHTSASVSSVAR
Sbjct: 1   MMAVEDQKSTSDGKVWGFLKQTFKHSTGGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL
Match: A0A6J1ILI2 (vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111478109 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.6e-116
Identity = 225/257 (87.55%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTS RTSHQTHPPVE TNPHTSASVSSVAR
Sbjct: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSYRTSHQTHPPVERTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGES+IATVFKFVEVPE+NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESLIATVFKFVEVPENNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKP EE+GPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPAEETGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL
Match: A0A6J1GCU7 (vesicle-associated protein 4-2-like OS=Cucurbita moschata OX=3662 GN=LOC111453036 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115
Identity = 224/257 (87.16%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTS RTSHQT+PPVE TNPHTSASVSSVAR
Sbjct: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSYRTSHQTNPPVERTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGES+IATVFKFVEVPE+NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESLIATVFKFVEVPENNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKP EE+GPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPAEETGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL
Match: A0A6J1KMN5 (vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496681 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.4e-115
Identity = 222/256 (86.72%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 2   MAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVARS 61
           MAIDDQKSTSDGKVWGFLKQTFRHSASG TTSSRTSHQ HPPVEG NPHTSASVSSVARS
Sbjct: 1   MAIDDQKSTSDGKVWGFLKQTFRHSASGTTTSSRTSHQPHPPVEGMNPHTSASVSSVARS 60

Query: 62  LLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAI 121
           LLPTRRRLKLDPSNKLFFPYEPGKQ RSAIGIKNTSKS+VAFKFQTTAPKSCFMRPPGAI
Sbjct: 61  LLPTRRRLKLDPSNKLFFPYEPGKQARSAIGIKNTSKSFVAFKFQTTAPKSCFMRPPGAI 120

Query: 122 LAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL--------- 181
           LAPGESIIATVFKFVEVPE+NEKP+DQKNNRVKFKIMSLKVKGQMDYVPEL         
Sbjct: 121 LAPGESIIATVFKFVEVPENNEKPMDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQVS 180

Query: 182 -----------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKER 232
                            ALEKLKRQLAEADAALEARKKPPEE+GPKIIGEGLVIDEWKER
Sbjct: 181 IEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPPEEAGPKIIGEGLVIDEWKER 240

[Close]

BLAST of Lsi01G003600 vs. NCBI nr
Match: XP_008439916.1 (PREDICTED: vesicle-associated protein 4-2 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-117
Identity = 226/257 (87.94%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMA++DQKSTSDGKVWGFLKQTFRHS +GATTSSRTSHQTHPPV+GTNPHTSASVSSVAR
Sbjct: 1   MMAVEDQKSTSDGKVWGFLKQTFRHSTTGATTSSRTSHQTHPPVDGTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. NCBI nr
Match: XP_004134732.2 (vesicle-associated protein 4-2 [Cucumis sativus] >KGN49181.1 hypothetical protein Csa_003551 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 226/257 (87.94%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMA++DQKSTSDGKVWGFLKQTF+HS  GATTSSRTSHQTHPPVEGTNPHTSASVSSVAR
Sbjct: 1   MMAVEDQKSTSDGKVWGFLKQTFKHSTGGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. NCBI nr
Match: XP_038883586.1 (vesicle-associated protein 4-2 [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 228/257 (88.72%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR
Sbjct: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKG MDYVPEL        
Sbjct: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGPMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             AL+KLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALDKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. NCBI nr
Match: XP_022977981.1 (vesicle-associated protein 4-2-like [Cucurbita maxima] >XP_023543767.1 vesicle-associated protein 4-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.6e-115
Identity = 225/257 (87.55%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTS RTSHQTHPPVE TNPHTSASVSSVAR
Sbjct: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSYRTSHQTHPPVERTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGES+IATVFKFVEVPE+NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESLIATVFKFVEVPENNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKP EE+GPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPAEETGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. NCBI nr
Match: XP_022949731.1 (vesicle-associated protein 4-2-like [Cucurbita moschata] >KAG6603725.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033904.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 224/257 (87.16%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTSHQTHPPVEGTNPHTSASVSSVAR 60
           MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTS RTSHQT+PPVE TNPHTSASVSSVAR
Sbjct: 1   MMAIDDQKSTSDGKVWGFLKQTFRHSASGATTSYRTSHQTNPPVERTNPHTSASVSSVAR 60

Query: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120
           SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA
Sbjct: 61  SLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGA 120

Query: 121 ILAPGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL-------- 180
           ILAPGES+IATVFKFVEVPE+NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL        
Sbjct: 121 ILAPGESLIATVFKFVEVPENNEKPVDQKNNRVKFKIMSLKVKGQMDYVPELFDEQKDQV 180

Query: 181 ------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEGLVIDEWKE 232
                             ALEKLKRQLAEADAALEARKKP EE+GPKIIGEGLVIDEWKE
Sbjct: 181 SIEQILRVVFLDPERPNAALEKLKRQLAEADAALEARKKPAEETGPKIIGEGLVIDEWKE 240

[Close]

BLAST of Lsi01G003600 vs. TAIR 10
Match: AT4G21450.1 (PapD-like superfamily protein )

HSP 1 Score: 308.5 bits (789), Expect = 4.4e-84
Identity = 183/296 (61.82%), Postives = 205/296 (69.26%), Query Frame = 0


Query: 2   MAIDDQKSTSDGK-VWGFLKQTFRHSA---------------SGATTSSRTS-------- 61
           M + ++K TSDGK  WGF K  FR+S+               SGA++SS +S        
Sbjct: 1   MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60

Query: 62  -----HQTHPPVEGTNPH-----------TSASVSSVARSLLPTRRRLKLDPSNKLFFPY 121
                HQ H  +    PH            S SVSSVA+S LPT+RRLKLDPS KL+FPY
Sbjct: 61  HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120

Query: 122 EPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPES 181
           EPGKQVRSAI IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIATVFKFVE PE+
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180

Query: 182 NEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL--------------------------ALE 232
           NEKP+DQ+ +RVKFKIMSLKVKG MDYVPEL                          ALE
Sbjct: 181 NEKPMDQR-SRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALE 240

[Close]

BLAST of Lsi01G003600 vs. TAIR 10
Match: AT4G21450.3 (PapD-like superfamily protein )

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-80
Identity = 182/315 (57.78%), Postives = 205/315 (65.08%), Query Frame = 0


Query: 2   MAIDDQKSTSDGK-VWGFLKQTFRHSA---------------SGATTSSRTS-------- 61
           M + ++K TSDGK  WGF K  FR+S+               SGA++SS +S        
Sbjct: 1   MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60

Query: 62  -----HQTHPPVEGTNPH-----------TSASVSSVARSLLPTRRRLKLDPSNKLFFPY 121
                HQ H  +    PH            S SVSSVA+S LPT+RRLKLDPS KL+FP+
Sbjct: 61  HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPW 120

Query: 122 -------------------EPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAIL 181
                              EPGKQVRSAI IKNTSKS+VAFKFQTTAPKSCFMRPPGAIL
Sbjct: 121 FVSEDLRSIDTSLKFLSFNEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAIL 180

Query: 182 APGESIIATVFKFVEVPESNEKPVDQKNNRVKFKIMSLKVKGQMDYVPEL---------- 232
           APGE+IIATVFKFVE PE+NEKP+DQ+ +RVKFKIMSLKVKG MDYVPEL          
Sbjct: 181 APGETIIATVFKFVEPPENNEKPMDQR-SRVKFKIMSLKVKGPMDYVPELFDEQKDDVSK 240

[Close]

BLAST of Lsi01G003600 vs. TAIR 10
Match: AT4G05060.1 (PapD-like superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 5.6e-71
Identity = 169/288 (58.68%), Postives = 191/288 (66.32%), Query Frame = 0


Query: 2   MAIDDQKSTSDGKVWGFLKQTFRHSASGATTSSRTS-------------------HQTH- 61
           MA+ + KS SDG+ WG  K  FR+S S A ++S +S                   HQ+  
Sbjct: 1   MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60

Query: 62  -----PPVE---GTNPHTSA----SVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQVRS 121
                PPV    G N H SA    S+SSVARSLLPT+RRLKLDPS KL+FPYEPGKQVRS
Sbjct: 61  FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120

Query: 122 AIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPESNEKPVDQK 181
           AI IKNTSKS+VAFKFQTT PKSCFMRP GAILAPGE IIATVFKFVE PE+NEKP++QK
Sbjct: 121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180

Query: 182 NNRVKFKIMSLKVKGQMDYVPEL--------------------------ALEKLKRQLAE 231
           +  VKFKIMSLK+K   DY+PEL                           +EKLK QLAE
Sbjct: 181 SG-VKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAE 240

[Close]

BLAST of Lsi01G003600 vs. TAIR 10
Match: AT5G54110.1 (membrane-associated mannitol-induced )

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70
Identity = 139/205 (67.80%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 54  SVSSVARSLLPTRRRLKLDPSNKLFFPYEPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSC 113
           ++SSVARSLLP RRRL+LDPS+ L+FPYEPGKQVRSAI +KNTSKS+ AFKFQTTAPKSC
Sbjct: 62  TMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSC 121

Query: 114 FMRPPGAILAPGESIIATVFKFVEVPESNEK-PVDQKNNRVKFKIMSLKVKGQMDYVPEL 173
           +MRPPG +LAPGES+ ATVFKFVE PE+NEK P++QK ++VKFKIMSLKVK  ++YVPEL
Sbjct: 122 YMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQK-SKVKFKIMSLKVKPGVEYVPEL 181

Query: 174 --------------------------ALEKLKRQLAEADAALEARKKPPEESGPKIIGEG 232
                                     ALEKLKRQL EA+AA+EARKKPP E+GP+++GEG
Sbjct: 182 FDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRVVGEG 241

[Close]

BLAST of Lsi01G003600 vs. TAIR 10
Match: AT4G21450.2 (PapD-like superfamily protein )

HSP 1 Score: 221.1 bits (562), Expect = 9.3e-58
Identity = 130/211 (61.61%), Postives = 148/211 (70.14%), Query Frame = 0


Query: 2   MAIDDQKSTSDGK-VWGFLKQTFRHSA---------------SGATTSSRTS-------- 61
           M + ++K TSDGK  WGF K  FR+S+               SGA++SS +S        
Sbjct: 1   MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60

Query: 62  -----HQTHPPVEGTNPH-----------TSASVSSVARSLLPTRRRLKLDPSNKLFFPY 121
                HQ H  +    PH            S SVSSVA+S LPT+RRLKLDPS KL+FPY
Sbjct: 61  HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120

Query: 122 EPGKQVRSAIGIKNTSKSYVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEVPES 173
           EPGKQVRSAI IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIATVFKFVE PE+
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180

The following BLAST results are available for this feature:

BLAST of Lsi01G003600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYN2	6.3e-83	61.82	Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=...	[more]
Q8LPQ7	7.9e-70	58.68	Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=...	[more]
Q1ECE0	3.0e-69	67.80	Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=...	[more]

BLAST of Lsi01G003600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZX4	1.4e-117	87.94	vesicle-associated protein 4-2 OS=Cucumis melo OX=3656 GN=LOC103484561 PE=4 SV=1	[more]
A0A0A0KN70	1.8e-117	87.94	MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516890 PE=4 SV...	[more]
A0A6J1ILI2	7.6e-116	87.55	vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111478109 ...	[more]
A0A6J1GCU7	4.9e-115	87.16	vesicle-associated protein 4-2-like OS=Cucurbita moschata OX=3662 GN=LOC11145303...	[more]
A0A6J1KMN5	6.4e-115	86.72	vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496681 ...	[more]

BLAST of Lsi01G003600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439916.1	2.9e-117	87.94	PREDICTED: vesicle-associated protein 4-2 [Cucumis melo]	[more]
XP_004134732.2	3.7e-117	87.94	vesicle-associated protein 4-2 [Cucumis sativus] >KGN49181.1 hypothetical protei...	[more]
XP_038883586.1	4.9e-117	88.72	vesicle-associated protein 4-2 [Benincasa hispida]	[more]
XP_022977981.1	1.6e-115	87.55	vesicle-associated protein 4-2-like [Cucurbita maxima] >XP_023543767.1 vesicle-a...	[more]
XP_022949731.1	1.0e-114	87.16	vesicle-associated protein 4-2-like [Cucurbita moschata] >KAG6603725.1 Vesicle-a...	[more]

BLAST of Lsi01G003600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21450.1	4.4e-84	61.82	PapD-like superfamily protein	[more]
AT4G21450.3	5.1e-80	57.78	PapD-like superfamily protein	[more]
AT4G05060.1	5.6e-71	58.68	PapD-like superfamily protein	[more]
AT5G54110.1	2.1e-70	67.80	membrane-associated mannitol-induced	[more]
AT4G21450.2	9.3e-58	61.61	PapD-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 69..175 e-value: 8.8E-27 score: 93.1
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 68..191 score: 16.898014
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 64..224 e-value: 4.0E-22 score: 80.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..60
None	No IPR available	PANTHER	PTHR10809:SF101	VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED	coord: 173..230 coord: 34..172
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 173..230 coord: 34..172
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 57..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G003600.1	Lsi01G003600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005886	plasma membrane