Lsi01G003190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G003190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Heat stress transcription factor B-2a-like
Location	chr01: 2821120 .. 2829729 (+)
RNA-Seq Expression	Lsi01G003190
Synteny	Lsi01G003190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTAGACAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGTGTTCTCGTCTTCTAATGATATTCTATTCCTGGAAACGCCCCATTTTCAAGACAAGAAAGAAAGGAAGAAGAAAGATAAAAATAAAGTGCATTGTTGTCTTTGTATTCTCTGTACAGGCTTTTGGAGGTAAGCTTGTGGACATATGTTTTTAGATATATATATATATATATATATACAGATGTTCTTTTCACCTTTTCTTTGACTCATTTAAGTACTTTACATAGATAATCGAATATTTACATTTGAAATTTTTAAAGTTATAGCATTAAGATTGAACTAATACTGTTTATTACCTAGATTGTGTTCTTTCTTCTTAATATGTCAATGCATGTGGGAAATGTTTTCAGTATGCTAGATGAGTAAGTTTACTTCGTACCAGGACCTGTTTTCTTTATTTCTGAGGTGTTAGTCTGTAAATTTGTTGTATCTTGTGGGATTCTTTTGGACTTTTACTCCCAATAAAAAAACAAATCCTCATATATATTATTACATCACTTTAACTGAAATGATTTATAACTTAACTGAAATTTTTTCTTAAATTCATTTAATTAATATGTTATTATTAGGGGTATTTTTTAAAAATAGAAAAATAAAGAAAACTATTTACAGAAAATAGCAAAATTTTTAGATAGTAGTGATAGATGTTGATAGAAGTCTATAGGGTCTATTGATAAAAATGATAGAAGTCTCAATATCTATCCGTGTTTTTTTTTTTGCTATTTTTTTTGTAAATAATTTGACATTTTTTCTATCTATGAAAATTTTTCTTATTATTATACTACATAACTTGGTTTGTATTTTTTTTTTCATTCAAAAAATAAAAATAAAATAAAATAAAAACTTTCGAGGTAAATATTCACATAAAGATGTCTATAAGCATCATTTTAGTAAAATATATACATTTCATTATAGAAAATTTTCACAGATAGAAAAAATATCGAACTATTTACATAAAATAGCAAAAAAATCATTGATAGACATTGATAGACTCCTATTTTGCTATTTTGTGTAAATAGTTTTTCTTATTTTTCTATTTTTTAAAAATTTCTCTTTCATTATTTGTGGCTTCTAAAATAAACTAGAAATTATTCTTTCTAAATATATCTCAACCTCAAATTTTCTCGATATTAGCGGTTTAAATCTCCCTTCCCCGTTTTGTTGACTAAAATAATCTCTCAAAAACACTAATATACCTAACTTAAAAATTATATATATACACCAAAAGAAAGTGAGAAACATGAAAAGCATGAATCAACATTAAAAGAATTAGGTGAAAATGGAAATAGTTTAAGATTTTTTTTTTTTTTTTCTTTTGAAGAAAGTTGATGAGAAGATGATAATGTTTACTTGGAAATAAAAATATATGAGAAATTTTGTATGGTATAGTTGGAGTTTGTGATTTGGAAGATGTTAATTTGTCAAAAGTAGGAAGATTTTCTTTCAAAACCAAAATAAAAATAATCTTTTGACTAAATGGTAGTATTATCTCTAAACTTTGTCCATTATTTCAATTCTTTTGAATGTTGTAATATTATCTTTGATTTTGAATAAATGTTTCAAAATTCTTTTGAATGTTGTAATATTATCTTTGACTTTGAATAAATGTTTCAAAATTACCATTAAAGTATAGCAGAAAGTTTGCTGTTTCATATTATTGTCACTCAACTTTCGAGGTCCAATTTTTCGTTTAACATTTTAATATATTTGTACTACAAGGATATTTAAGCAAAAGTTAATGTAATATTATACTTTGGAAAGGTTATTTTTAAACATATAGCAATATTTTGGTGTATTTTTTGTATTTTCTGCTCAAGTACACGATACTAAATATGAGCCCAACGTAGGTGGTGGACCTTTTGCGATTTTAAGCCGGCCCAAATTTGGAGCTGAACATAGCCGAGCCCGCTTCTTTTTAAGCCCAATGTCAAGGCATTTTCCATGTAGAATATTCATGAGAAAAATATAAGGAAATTTTCAGAAAAGAATAAAAATAATGTTGCTGCCCAGGATCGAACTGGGGACCTTTAGTGTGTAAGACTAACGTGATAACCACTACACCACAGCAACTTATTGTGTTGTTGTAACACTTAAATTTAAATTTGTAATCTATTAAAAAATCTTAATGAGGTCATTCTGCCGGAAAAAGAATATATATTCAATGTGGTTAGTAAAAAAAACTAGTTATACCATTTTGGTCTATATATTTTATATTTTATTTTATTTTAGTCCTAATTATACTTTCAATTGTCTAATTTTAGTCCCTACATTTACTAAATTTTTAGGGAAGTTTGAGGTAAGGAGTGAAGTTATTAAGTCTTGATAGTTGTTTAGTGTGGGGCTAGAACCACAAACTCTTTGGACCAAACCAGGAGATTCAAATTTAAATGATTAAAAGAGATTTAAAATACTAAAAAGAAATACAATGAAACCAAATATGGGTAGCAAGATCTTCATCTGATGGCATTCTCGATATTTATATAAAGTGAATTAGGCGTGTGATGCTATTATTCTTATGATTTTTATTTTTTTTATTTTTTTCTTTTCTATCATTCAAAATCAAAACAAAATGTCAAAGTGAACTTATCTCAATAGTAATTAGTATGGTCTTCCTCCCTAAAGGTTAAAGGTTAGATTACTCAAATCTCATCATTGTTGTACTAAAGAAATCAAAACAAAAAAAAGGAGAAGATTGCACAAACCACCTTTTAACGATGATAATCCCTAATCAAGCTCTATGTCGTTGTTTTCAACTCGAATATCCACTAATTTTATATCTTTACTGAATCAAAAGAGAACAAGAGGAATACTAAAATGAAGAACAGTAGAACAAAAAAAGAAAATCTTATGTCAATGTTGCCCTTATCCTACATACGTGTGAGTCACCCAAATGTAAGTTAAGGAACTAATTACAATACTTAACAAAAATTTAAGGAAGTGATTGATGAAATTAAAAGTTTATAAGTGTAATGATAATAAAGACTCTAATTTAATTTAGGGATGGTCGGTATAATTTTCCAAAAACAAAAATGCTATTAATTCAAATTCTCCATTAATGTTTAAGCCAGCCCAAGTTCTCGGTAGGAGCCCAATAATATAGGCGAACCCGCCTCTTTCTAAGCTCAATCTCAAGTCATTTTCCATTAGAATGCTATTGCTAATGAGTGAAACTATAAGGAAATTTCCAGGAATATAAATATATATTAAAAAAAAGGTGAGAGAAAATAAATATAGAAAAAATGGATGGGAAACATTGTTGCTGCCCAGGATCGAACTGAGGACCTTTAGTGTGTAAGACTAACGTGATAACCACTACACCACAGCAACTTCATGCTTTAAAAGGTTCTATAATTTCAATTTTTCATAAACTTGAATGAATTATTGCATACACATGCACGTGCCCATTTAAATCCGCCGAGTGTCAAAATTGAAAATTCAACCAATCCGTCAACAAAGTTTTTTTTTCTTACAAGTTTCTGGCTCTTGTGTAAATATTTTAATGATACAAACTTTCAATAAAAAAATTTTAATGGACTTTCTTAAATAATGACTTTGAGAACTTTTTACTACATATGATATGACTAGAGATCGTTAGATATATTCGTCTATAATTTTAATTTTCATTGACTCACGCTTCTTTTCTTATTCTTTAATGACAGATGAAGATCTTTTAAACCTTACCTCTTCTTCTTTTACTTCGTCTTCTTTTCAATTTACCATTAATAACTAACTATATGAATCTTTTTTTATCTCCATCATATGGATAATACCAGCTTTATTCTGATTTTTAATCTTTCTACGGAGAGTAATTATGTATTATGTGCCATCTTATTATGTATTATACTAGTTTACCCACTTTTTAAGGGAAAATATATATACTCTTTTATTTTCGAGTGATTTTAATTTATAAAGATTTATATGTTTGGTTATATCTTTTTAAAAAGTGATTTTAATTGCAATTTGATTTTTCTTTTTGGAGAAAACTTGTGTGTAGTCCTCCATTGCACTCAATTAAAAATTGTCACGTGGCAATTCATTTCTTTTAAAAAAAATTATTAAAAAATTAATTTTTTGTATAGAAGAAGGGAGAGTATGGAACTTACGTATAATTTTTGCTTTTTTTTCTTCTTCTTTTCGCACAATGACTATATGAAAATTTGAGAGCAATTTTATAATTTTTTGTATCATTGAGAGTTTTATCATGTGGATTTTGATTTTTTTTTAATATGAAAATTCATTTTTTCGAATAATTACCAAAACTAATCATTTAGAAAATGATTATTTATCCATCTAATTATTTCAAAATTGATTTTTTTTTTTTTTTTGCCAAACACACACATATACATAGTCTTTGGATCTTCTAGTCATTAATCCAAAAACATTCTTAATACTCCAAGAAAATGGGCAGATAGCTGGATAGAAAAATAAATAGTGAATCACTAAAAGCATTTGAAAAAAAAAAAAACATTGAAAATTATATGAATAAAATTTTTTTTTTCGAGATTATATAATTTTCAGAACTTTAATATTAGTATCAACATTTTAGTGAGTCCACAAATCTCGTGGTTCATCCCTGTAGCCATCATTATTGAACATTTTTTACTAAATTATGCATAACACGCATCATCCTGACCCTTCCTTTTGATATGATCAAGATGTTGAGGAGAATCACAGCCGTCCATTAATTACATCCTTAAAATCCTTTTCCCCCTTTTCCCAATTCCCACAATGAAGTGGGTAGTTGGTGTAATGTTTTTTTTATAGAATATGTCAATTACTATTTATTCTCTCCCACCGCCCCCACTCCACGCCATAAATCAAGTTTAATTAAATTAATTTGCGTTACATCTCTATATTCTTTATTGTAATCTACTGTTTCTATCACATTACATAAGAATTCAAATTATAAAAGTATTGCTTCGGATTGATTTTTATTGGAAAAATCAATCAAAATTGAACCAAATCAAGAGTATATATATAATCTTAAATAAATTGTAATATTAAATATCTTTTAGTATTTTAATTATTATGGTACCTATATATTTGTTGTTTAAGAAAAAGACCAATTATTAGGGTGAAAAAAGTGTCCCCACAAAAATGTACAATTTCAATCTAGAAAAAAAGAAAAGACTAAATTTTAATTTAAAATTAGCAAAAATGACCAATTCAAAATAAAAGTGGAAATAAAAAGGAAAATTTTCACAAATAGGAAAAAGTCAAACTATTTACAGAAAATAGTAAAAAAAACATTGATAGACATTGATAGACTTTTATCAATATCTATGAGTGATAGAGTTCTATCATTTATATCACTGATAGAGCTTGATAGATTTCTATCCGCGTATATCACAACTATCTAAAAATTTTGTTGTTTTTGTGTAAATTGTTTCCCTTATTTTTCTATTTTTAAAAGTTCCTCAAATAAAAATGAAAAATTGGAAGAAAAAAATGCCAAACACCGAGAACCAAACCAATAATAAACCAAATTAAATAAAAACCAATTCATTTATTTTGTTCTTCATTGGATATTGGTTTGGATAATTTTTTTTTATAAAATTGATTGGTTTAGTTTGGTTCTTGGTTGGCTCCAAAATCAATAAAATTGAACCTTAAATGTTAGTACAGAACTTCCAATTTTCATTAAAAAAAAAAAAAAAAAAAAAACTAACTTTTGAATCACGTGTAATTATTGAGCTAGTTTTAAATTAACATAATTTTCTAGGATTAATAGAAATATACATATAATTTTTTTTTTAATTTTGAATTTCACAAGATTTATCAGTTAGTCAATGAAATCACTCACATGGGATGCAGACATACAGAGCCAAAGAGAAAGAGGAGAAAGTGGGTCAGAGTTCGCGGCCCTTATTTTGAAATTTTTATGTCATTTTTCAACATTGCATTATGGAAAATAATATTCCTAAACAACTAAATTGTTCTTTCTTTCTTTTCTTTTTTTTTTTCATTTTATTTAATTATTTATACGAAAAACCATATCTTATTTTCATTTTCCTCTCTAACATTGTAAAATTTTCTAGCATAATTATAGAAAACAGGTTCTTTCACTGCACTCTTGTACACACACAATACACATCATCTAAAATAGGGATAGAATTAAGAATTTTTTCTGTACTATTTATTATACATATAAAAAAAATGTTAGTGCATGAATCTAGCCGAACAAATCAAATTGGGTTGGTGTGATCTGCTCGGTAGATAAATGATATCTTTAGAGTAAGATGTTGTATTGATGTGGTACTATACCCAACACACTCTAATGCTATGTAGGACTTCGTAAGAGGTAGTGCATACGTTTCATGAAGAGTGACAAGTTCTATCATAGGTGTCAGGGTCGTCCATTCAGGCGATCGAAATCATCAAGGAGATCTCCTGCCTCGGCTCGGTAAGTATCGAGTCCCAGCAGATCTTGAACCACCCATAATAAATATGATTTTTGAGTTAGGAACATATTCATTTAGGATCCACACTTATTAATATAATTGATCAATTTGAAGAGTCCAGTTTACAATCCTATTATTTTATATTCTAGTCTGATATATCATGCATTATGATATTACTAGAAGAAGCAAAAAGTTTTGATTTTATAACTATTTTGTTAACATGTTTTTTTTTCCCATATATTTACTTCAATGGGTCCAGCTTATATCACCAAACAACCTTGAAGAAAAAGGCAGAGAATTGGGAAAAGGACAAAAGAAATAAAGACCAAAGGCAACAGCCACCCTTTATAGAACCTGGTAGCTTCCTAGCAAATTGGTGCCGGTGTGGGAGGGGTTATAAATAGAGAAGCTGCTCAACTTTGAACAAATTTTGGGTGTGAAAATTGGCATTAAAGTAATTATGCAGTCTTCAAGAACCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTAGAAGAAGCTGGAAGCTTCCATTTCAAAGCAGCTGATCAAGAAGAAGAGGAAGAAGAAGAAGAAAAGGATGGTGGCAATAGGATTGTGTCCTGGAATGCAGAGGGAAGTGGGTTCATTGTTTGGTCTCCTGCTGATTTCTCTGAGCTTTTATTGCCCAAGTATTTCAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGTATGTAATTCTCTCCTTTCTCTCTTTTATCTTTTTGAGAATGTCCCCACCATTTTCTATTCTCATAAACATCTTGAAGAAGAGGTATTCATTGTAAAGTGAGTCCAATTGACCTTTTTCCTGATTTGGAATGCTTATTCTCCTATGGATTTGGGAAGGAGTACAAGACAGAATGACTTAGGATATATTTGATCTTTTATATATGTTCTTAACATCATTTTTTGAGTCGGGTTTCAATCTAATTCTTGATATTTTGGAGTCAGGGGTTCAAGAAAACGTCGTCGAAAAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGAGGAAACAGGCATTTGTTGGTGGAGATTGTTCGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAACTGCAACAATGGCGGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAAGAGAACAATAACTTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCCAAATTCAAAGCACTACATATTAGATTGCTCGACTGTCTAGGTCAGTGCATTGAAAAATAGTCTATGGAGAGTTTTGATTGTTAGAAAGAGGGGTTGGTTGTGAAATTTCAGAAAGTTAGTAATGCTTTTGGGTTATCCATTTGCTCCATGTTGAGTTAACACTGTCCACAGAGTTATAACAATACTTTGGATTTCTGTAAAAGTTAGATATGAACAGATCATTTTATACACTAGTTCAATGATAGTCTAATTACGGATG

mRNA sequence

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTGTCAGGGTCGTCCATTCAGGCGATCGAAATCATCAAGGAGATCTCCTGCCTCGGCTCGTCTTCAAGAACCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTAGAAGAAGCTGGAAGCTTCCATTTCAAAGCAGCTGATCAAGAAGAAGAGGAAGAAGAAGAAGAAAAGGATGGTGGCAATAGGATTGTGTCCTGGAATGCAGAGGGAAGTGGGTTCATTGTTTGGTCTCCTGCTGATTTCTCTGAGCTTTTATTGCCCAAGTATTTCAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGGGTTCAAGAAAACGTCGTCGAAAAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGAGGAAACAGGCATTTGTTGGTGGAGATTGTTCGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAACTGCAACAATGGCGGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAAGAGAACAATAACTTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCCAAATTCAAAGCACTACATATTAGATTGCTCGACTGTCTAGGTCAGTGCATTGAAAAATAGTCTATGGAGAGTTTTGATTGTTAGAAAGAGGGGTTGGTTGTGAAATTTCAGAAAGTTAGTAATGCTTTTGGGTTATCCATTTGCTCCATGTTGAGTTAACACTGTCCACAGAGTTATAACAATACTTTGGATTTCTGTAAAAGTTAGATATGAACAGATCATTTTATACACTAGTTCAATGATAGTCTAATTACGGATG

Coding sequence (CDS)

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTGTCAGGGTCGTCCATTCAGGCGATCGAAATCATCAAGGAGATCTCCTGCCTCGGCTCGTCTTCAAGAACCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTAGAAGAAGCTGGAAGCTTCCATTTCAAAGCAGCTGATCAAGAAGAAGAGGAAGAAGAAGAAGAAAAGGATGGTGGCAATAGGATTGTGTCCTGGAATGCAGAGGGAAGTGGGTTCATTGTTTGGTCTCCTGCTGATTTCTCTGAGCTTTTATTGCCCAAGTATTTCAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGGGTTCAAGAAAACGTCGTCGAAAAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGAGGAAACAGGCATTTGTTGGTGGAGATTGTTCGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAACTGCAACAATGGCGGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAAGAGAACAATAACTTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCCAAATTCAAAGCACTACATATTAGATTGCTCGACTGTCTAGGTCAGTGCATTGAAAAATAG

Protein sequence

MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGSSIQAIEIIKEISCLGSSSRTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKDGGNRIVSWNAEGSGFIVWSPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGNRHLLVEIVRKKCEPSVFPAFLRSSHEGTATMAVDQENGDHLLLMEENNNLRRQKLELQAQIAKFKALHIRLLDCLGQCIEK

Homology

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BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.4e-41
Identity = 96/209 (45.93%), Postives = 128/209 (61.24%), Query Frame = 0


Query: 23  ENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASL--AIDERPQCPVCKAD 82
           EN  G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ QS S   +  ++PQCPVCKA+
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 83  ISHTTMVPLYGRGQTAEEVEP-EAKAMHHDINIPPRPSA--CGNQ-MLATSSTHQQQLPY 142
           +S  T++PLYGRG   +  +P E KA +  I IP RP +  CG   +L T+ ++  QL  
Sbjct: 93  VSEKTLIPLYGRG--GQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQ 152

Query: 143 RNPYQRPN--HDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSD- 202
           R  YQ+ +    P   G+Y    ++P+L+    + +   H    MIG+  + R+FGNS  
Sbjct: 153 RRGYQQQSQTRQPAYQGSY---MSSPMLSPGGATANMLQH---SMIGEVAYARIFGNSST 212

Query: 203 NLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
            +Y+Y NSY L  SS  RMRRQ  Q   S
Sbjct: 213 TMYTYPNSYNLAISSSPRMRRQLSQADRS 233

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BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.1e-36
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 24  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDE-RPQCPVCKADIS 83
           N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLH+Q +S+++D+ +  CPVCK++I+
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 84  HTTMVPLYGRGQTAEEVEPEAK---AMHHDINIPPRPSACGNQMLATSS-----THQQQL 143
            T++VPLYGRG ++      +K   A+  DI   P PSA  N + + SS      HQ   
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLS 156

Query: 144 PYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDN 203
           P  + +Q   + P  F   E        +LA      F +PV+GM GD V+TR+FG   N
Sbjct: 157 PSFHNHQ---YSPRGFTTTES------TDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTN 216

Query: 204 LYSYRNSYQLTGSSRNRMRRQEMQVSGSSI 225
             +    YQ       RM ++E  ++  SI
Sbjct: 217 --TIAQPYQ-----SQRMMQREKSLNRVSI 230

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BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.9e-31
Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVSGS 223
           G+S  RMRR+ MQ   S
Sbjct: 226 GTSGPRMRRRIMQADKS 230

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BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot
Match: Q9SCW4 (Heat stress transcription factor B-2a OS=Arabidopsis thaliana OX=3702 GN=HSFB2A PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.6e-29
Identity = 75/206 (36.41%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 238 SSSRTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKDGGNRIVSWNAEGSGFIVW 297
           SSS+   P PFL+KT++L+E++                      + ++SWN +GS FIVW
Sbjct: 14  SSSQRSIPTPFLTKTFNLVEDSSI--------------------DDVISWNEDGSSFIVW 73

Query: 298 SPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGNRHLLVEIVRK 357
           +P DF++ LLPK+FKHNNFSSF+RQLNTYGFKK    RWEF ++ F+RG + LL EI R+
Sbjct: 74  NPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRR 133

Query: 358 KCEPSVFPAFLRSSHEGTATMAVDQEN-----------------------------GDHL 415
           K   +       SS +   TM V   N                             G  +
Sbjct: 134 KITTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSV 193

[Close]

BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot
Match: Q94BZ5 (Heat stress transcription factor A-5 OS=Arabidopsis thaliana OX=3702 GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-27
Identity = 70/168 (41.67%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 245 PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKDGGNRIVSWNAEGSGFIVWSPADFSE 304
           PAPFL KTY++++++ +                    ++IVSW+A  + FIVW+ A+FS 
Sbjct: 21  PAPFLVKTYEMVDDSST--------------------DQIVSWSANNNSFIVWNHAEFSR 80

Query: 305 LLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGNRHLLVEIVRKKCEPSVF 364
           LLLP YFKHNNFSSFIRQLNTYGF+K   +RWEF ++ F +  +HLL  I R+K      
Sbjct: 81  LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRK------ 140

Query: 365 PAFLRSSHEGTATMAVDQENGDHLLLMEENNNLRRQKLELQAQIAKFK 413
           P     SH      + DQE     +L E+ + L R+K  ++A++ KFK
Sbjct: 141 PI---HSHSHPPASSTDQERA---VLQEQMDKLSREKAAIEAKLLKFK 156

[Close]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL
Match: A0A0A0KK60 (Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 5.5e-120
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 219

[Close]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL
Match: A0A5A7UGP7 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007450 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.3e-117
Identity = 201/222 (90.54%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAF+QYFAQGW HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEVE EAKAMH DINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEE SA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 219

[Close]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL
Match: A0A1S3AZB8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.3e-117
Identity = 201/222 (90.54%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAF+QYFAQGW HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEVE EAKAMH DINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEE SA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 219

[Close]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL
Match: A0A6J1KVR4 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496874 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 191/223 (85.65%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGW HVSGTGGTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHD-INIPPRPSAC 120
           ++S SLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEV PEA+A+H D ++IPPRPSAC
Sbjct: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120

Query: 121 GNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGM 180
           GNQ+LAT STHQQQL YRNPYQRPNHDP LFGNYEEDS AP LNLARTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180

Query: 181 IGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           IGDF++ RVFGNSDNLYSY+NSY LTGS RNR+RRQEMQ   S
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKS 223

[Close]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL
Match: A0A6J1CKD0 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111012249 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 3.6e-111
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MAFEQYFAQGW-THVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWL 60
           MAFEQY+A GW  HVS TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWL
Sbjct: 1   MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWL 60

Query: 61  HIQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSAC 120
           H+QSASLA DE PQCPVCKADISHTTMVPLYGRGQ+AEEVEPEAKA+H DI+IPPRPSAC
Sbjct: 61  HVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC 120

Query: 121 GNQMLATSST--HQQQLPYRNPYQRPNHDPFLFGNYEED-SAAPLLNLARTSFSGFHHPV 180
           GN MLAT S    QQQLPYRNPYQRPNHDP LF NYEED SAAPLLNLARTSFS FHHPV
Sbjct: 121 GNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPV 180

Query: 181 VGMIGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           VGMIGD ++TRVFGNS+NLYSYRNSY +TGSS NR+RRQEMQ S S
Sbjct: 181 VGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQEMQASKS 226

[Close]

BLAST of Lsi01G003190 vs. NCBI nr
Match: KAG6594605.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731.5 bits (1887), Expect = 4.2e-207
Identity = 364/450 (80.89%), Postives = 388/450 (86.22%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGW HVSGTGGTDRE  KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHD-INIPPRPSAC 120
           ++S SLAIDE+PQCPVCKADISHTTMVPLYGRGQ AEEV PEAKAMH D ++IPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGM 180
           GNQ+LAT STHQQQL YRNPYQRPNHDP LFGNYEEDS AP LNL RTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLGRTSFSGFHHPVVGM 180

Query: 181 IGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGSSIQAIEII----KEISC 240
           IGDF++ RVFGNSDNLYSY+NSY LTGS RNR+RRQEMQ    S+  I I     K   C
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAE-KSLNRISIFLFCCKLHIC 240

Query: 241 L----------GS-------SSRTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEK 300
           L          GS       SS+TRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEE+
Sbjct: 241 LLFNETTVERRGSLDFPYSWSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEE 300

Query: 301 DGGNRIVSWNAEGSGFIVWSPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEF 360
           +  NRIVSWNAEG+GFIVWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEF
Sbjct: 301 E--NRIVSWNAEGNGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEF 360

Query: 361 KHEKFQRGNRHLLVEIVRKKCEPSVFPAFLRSSHEGTATMAVDQENGDHLLLMEENNNLR 420
           KHEKFQRGN+ +L EIVRKKCEPSVFPAFLRSSHEG  TMAV Q NGDHL LMEEN NLR
Sbjct: 361 KHEKFQRGNKQMLGEIVRKKCEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLR 420

Query: 421 RQKLELQAQIAKFKALHIRLLDCLGQCIEK 429
           R+KLELQA+IA+FKALHIRLLDCL QCI+K
Sbjct: 421 RRKLELQARIARFKALHIRLLDCLDQCIKK 447

[Close]

BLAST of Lsi01G003190 vs. NCBI nr
Match: KAG6604446.1 (DNA-directed RNA polymerase II subunit RPB2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.7e-163
Identity = 298/389 (76.61%), Postives = 321/389 (82.52%), Query Frame = 0


Query: 42   VVTLCGHLYCWPCIYKWLHIQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEP 101
            +VTLCGHLYCWPCIYKWLH+QSASLAIDE PQCPVCKADISHTTMVPLYGRG+TAE+VEP
Sbjct: 1283 MVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGRGRTAEQVEP 1342

Query: 102  EAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPL 161
            EAKAMH DI+IPPRPSACGNQMLAT STHQQQLPYRNPYQRPNHDP LFGNYEEDSAA L
Sbjct: 1343 EAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASL 1402

Query: 162  LNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSG 221
            LNL RTSFSGF H V GMIG+FV+ RVFGNSDNL    NSY  TGS R+ +RRQEMQ   
Sbjct: 1403 LNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL----NSYLGTGSRRDGLRRQEMQ--- 1462

Query: 222  SSIQAIEIIKEISCLGSSSRTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKD-- 281
                             SSR RNPAPFLSKTYDLL+EAGSFHFKAAD+E+EE+EE+++  
Sbjct: 1463 -----------------SSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEENG 1522

Query: 282  GGNRIVSWNAEGSGFIVWSPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFK 341
            GGNRIVSWNA+GSGFIVWSPADFSE                      GFKKTS KRWEFK
Sbjct: 1523 GGNRIVSWNADGSGFIVWSPADFSE----------------------GFKKTSPKRWEFK 1582

Query: 342  HEKFQRGNRHLLVEIVRKKCEPSVFPAFLRSSHEGTATMAVDQENGDHLLLMEENNNLRR 401
            HEKFQRG+R +LVEIVRKKCEPSVFPA+LRSSHEG ATMAVDQENGDHLLLMEEN NLRR
Sbjct: 1583 HEKFQRGHRRMLVEIVRKKCEPSVFPAYLRSSHEGAATMAVDQENGDHLLLMEENKNLRR 1625

Query: 402  QKLELQAQIAKFKALHIRLLDCLGQCIEK 429
            QKLELQAQIA+FKALHIRLLDC+G+ IEK
Sbjct: 1643 QKLELQAQIAQFKALHIRLLDCVGRRIEK 1625

[Close]

BLAST of Lsi01G003190 vs. NCBI nr
Match: XP_038881993.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881995.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881996.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881997.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881998.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 4.0e-125
Identity = 210/222 (94.59%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQMLAT S HQQQLPYRNPYQ+PNHDP LFGNYEEDSAAPLLNLARTSFSGFHHP+VGMI
Sbjct: 121 NQMLATPSIHQQQLPYRNPYQQPNHDPLLFGNYEEDSAAPLLNLARTSFSGFHHPLVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 222

[Close]

BLAST of Lsi01G003190 vs. NCBI nr
Match: XP_004134707.1 (E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743484.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743485.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743486.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743487.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743488.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >KGN49224.1 hypothetical protein Csa_003905 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-119
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 219

[Close]

BLAST of Lsi01G003190 vs. NCBI nr
Match: XP_004134706.1 (E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743482.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743483.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-119
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 20  MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 79

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 80  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 139

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 140 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 199

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVSGS 223
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQV  S
Sbjct: 200 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKS 238

[Close]

BLAST of Lsi01G003190 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 152.9 bits (385), Expect = 5.8e-37
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 24  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDE-RPQCPVCKADIS 83
           N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLH+Q +S+++D+ +  CPVCK++I+
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 84  HTTMVPLYGRGQTAEEVEPEAK---AMHHDINIPPRPSACGNQMLATSS-----THQQQL 143
            T++VPLYGRG ++      +K   A+  DI   P PSA  N + + SS      HQ   
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLS 156

Query: 144 PYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDN 203
           P  + +Q   + P  F   E        +LA      F +PV+GM GD V+TR+FG   N
Sbjct: 157 PSFHNHQ---YSPRGFTTTES------TDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTN 216

Query: 204 LYSYRNSYQLTGSSRNRMRRQEMQVSGSSI 225
             +    YQ       RM ++E  ++  SI
Sbjct: 217 --TIAQPYQ-----SQRMMQREKSLNRVSI 230

[Close]

BLAST of Lsi01G003190 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 136.3 bits (342), Expect = 5.6e-32
Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVSGS 223
           G+S  RMRR+ MQ   S
Sbjct: 226 GTSGPRMRRRIMQADKS 230

[Close]

BLAST of Lsi01G003190 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 136.3 bits (342), Expect = 5.6e-32
Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVSGS 223
           G+S  RMRR+ MQ   S
Sbjct: 226 GTSGPRMRRRIMQADKS 230

[Close]

BLAST of Lsi01G003190 vs. TAIR 10
Match: AT5G62020.1 (heat shock transcription factor B2A )

HSP 1 Score: 130.2 bits (326), Expect = 4.0e-30
Identity = 75/206 (36.41%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 238 SSSRTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKDGGNRIVSWNAEGSGFIVW 297
           SSS+   P PFL+KT++L+E++                      + ++SWN +GS FIVW
Sbjct: 14  SSSQRSIPTPFLTKTFNLVEDSSI--------------------DDVISWNEDGSSFIVW 73

Query: 298 SPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGNRHLLVEIVRK 357
           +P DF++ LLPK+FKHNNFSSF+RQLNTYGFKK    RWEF ++ F+RG + LL EI R+
Sbjct: 74  NPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRR 133

Query: 358 KCEPSVFPAFLRSSHEGTATMAVDQEN-----------------------------GDHL 415
           K   +       SS +   TM V   N                             G  +
Sbjct: 134 KITTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSV 193

[Close]

BLAST of Lsi01G003190 vs. TAIR 10
Match: AT4G13980.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-28
Identity = 70/168 (41.67%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 245 PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEKDGGNRIVSWNAEGSGFIVWSPADFSE 304
           PAPFL KTY++++++ +                    ++IVSW+A  + FIVW+ A+FS 
Sbjct: 21  PAPFLVKTYEMVDDSST--------------------DQIVSWSANNNSFIVWNHAEFSR 80

Query: 305 LLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGNRHLLVEIVRKKCEPSVF 364
           LLLP YFKHNNFSSFIRQLNTYGF+K   +RWEF ++ F +  +HLL  I R+K      
Sbjct: 81  LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRK------ 140

Query: 365 PAFLRSSHEGTATMAVDQENGDHLLLMEENNNLRRQKLELQAQIAKFK 413
           P     SH      + DQE     +L E+ + L R+K  ++A++ KFK
Sbjct: 141 PI---HSHSHPPASSTDQERA---VLQEQMDKLSREKAAIEAKLLKFK 156

The following BLAST results are available for this feature:

BLAST of Lsi01G003190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	8.4e-41	45.93	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	8.1e-36	42.38	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	7.9e-31	38.07	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q9SCW4	5.6e-29	36.41	Heat stress transcription factor B-2a OS=Arabidopsis thaliana OX=3702 GN=HSFB2A ...	[more]
Q94BZ5	2.4e-27	41.67	Heat stress transcription factor A-5 OS=Arabidopsis thaliana OX=3702 GN=HSFA5 PE...	[more]

BLAST of Lsi01G003190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK60	5.5e-120	91.89	Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1	[more]
A0A5A7UGP7	3.3e-117	90.54	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AZB8	3.3e-117	90.54	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 ...	[more]
A0A6J1KVR4	1.5e-112	85.65	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1CKD0	3.6e-111	85.84	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Lsi01G003190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594605.1	4.2e-207	80.89	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. soror...	[more]
KAG6604446.1	1.7e-163	76.61	DNA-directed RNA polymerase II subunit RPB2, partial [Cucurbita argyrosperma sub...	[more]
XP_038881993.1	4.0e-125	94.59	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 u...	[more]
XP_004134707.1	1.1e-119	91.89	E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743484.1 ...	[more]
XP_004134706.1	1.1e-119	91.89	E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743482.1 ...	[more]

BLAST of Lsi01G003190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	5.8e-37	42.38	RING membrane-anchor 3	[more]
AT4G03510.1	5.6e-32	38.07	RING membrane-anchor 1	[more]
AT4G03510.2	5.6e-32	38.07	RING membrane-anchor 1	[more]
AT5G62020.1	4.0e-30	36.41	heat shock transcription factor B2A	[more]
AT4G13980.1	1.7e-28	41.67	winged-helix DNA-binding transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 387..414
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 2..229
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 29..79 e-value: 7.34066E-27 score: 99.6859
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 25..92
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 244..357 e-value: 3.6E-39 score: 146.1
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 248..357 e-value: 2.1E-27 score: 95.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 31..77 e-value: 6.5E-9 score: 45.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 31..78 score: 12.504031
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 31..77 e-value: 9.4E-8 score: 31.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 240..358 e-value: 3.6E-30 score: 106.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..91 e-value: 2.4E-16 score: 60.9
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..229
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 46..55
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 281..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G003190.1	Lsi01G003190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0043565	sequence-specific DNA binding