Lsi01G002810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G002810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Glutaredoxin
Location	chr01: 2504731 .. 2505135 (+)
RNA-Seq Expression	Lsi01G002810
Synteny	Lsi01G002810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCAAGCAATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTCCTCCTGCAAGGCACCCGAGGCTTCCGACGATGGGGTTGAAAAATTGGTGTCCAAGAACGCCGTTGTGGTTCTGGCGAGGCGTGGATGTTGTATGAGCCATGTTTTGAAACTGTTGTTGTTGGGCCACGGTGTGAATCCGACCGTCGTTGCCGTCGGTGAAGAAGATGAAGTAGATATCGCCGGCGAGATTGAGAAATTTTCCCCCGGCACCGGAGACGGGAATGATAGGAGAGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTTGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCCTTGTGGCTTTGA

mRNA sequence

ATGCATCAAGCAATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTCCTCCTGCAAGGCACCCGAGGCTTCCGACGATGGGGTTGAAAAATTGGTGTCCAAGAACGCCGTTGTGGTTCTGGCGAGGCGTGGATGTTGTATGAGCCATGTTTTGAAACTGTTGTTGTTGGGCCACGGTGTGAATCCGACCGTCGTTGCCGTCGGTGAAGAAGATGAAGTAGATATCGCCGGCGAGATTGAGAAATTTTCCCCCGGCACCGGAGACGGGAATGATAGGAGAGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTTGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCCTTGTGGCTTTGA

Coding sequence (CDS)

ATGCATCAAGCAATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTCCTCCTGCAAGGCACCCGAGGCTTCCGACGATGGGGTTGAAAAATTGGTGTCCAAGAACGCCGTTGTGGTTCTGGCGAGGCGTGGATGTTGTATGAGCCATGTTTTGAAACTGTTGTTGTTGGGCCACGGTGTGAATCCGACCGTCGTTGCCGTCGGTGAAGAAGATGAAGTAGATATCGCCGGCGAGATTGAGAAATTTTCCCCCGGCACCGGAGACGGGAATGATAGGAGAGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTTGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCCTTGTGGCTTTGA

Protein sequence

MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL

Homology

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BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.3e-27
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 23  EASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEK 82
           + + + V  +V +NAV+V+ RRGCCM HV++ LLLG GVNP V+ + EE E ++  E+E 
Sbjct: 29  QGNGERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELEN 88

Query: 83  FSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
                G G    V+ P V+VGG++FGGL++VMA HISGELVP LK+ GALWL
Sbjct: 89  IGVQGGGGT---VKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-24
Identity = 67/143 (46.85%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 1   MHQAIPY---RTW------IPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHV 60
           M+QAIPY   R W        AAA+     P   ++ V + V++  VVV+ R GCC+SHV
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPVVVVGRSGCCLSHV 60

Query: 61  LKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLE 120
           +K LL G GVNP V         ++AGE E      G G    V  P VFVGG++ GGL+
Sbjct: 61  VKRLLQGLGVNPAV--------HEVAGEAELAGVVAGGGG---VALPAVFVGGRLLGGLD 120

Query: 121 KVMAAHISGELVPALKDAGALWL 135
           ++MA HISGELVP LK+AGALWL
Sbjct: 121 RLMAVHISGELVPILKEAGALWL 132

[Close]

BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 8.5e-24
Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 32  LVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGN 91
           +V +NAVVV ARRGCC+ HV K LLL HGVNP VV +GEED  +    +           
Sbjct: 59  VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVSD--------- 118

Query: 92  DRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
             + + P++++GGK+FGGLE +MAAHI+G+LVP L+ AGALWL
Sbjct: 119 --KEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.5e-23
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 14  AASSSCKAPEASDD--GVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEE 73
           A S++  A  A+D+   V + V +  VVV+ RRGCCM+HV + LLLG G NP V+ VG++
Sbjct: 4   ARSAAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDD 63

Query: 74  DE----VDIAGEIEKFSPG-----TGD-GNDRRVQFPVVFVGGKMFGGLEKVMAAHISGE 133
            +    VD A +  +   G      GD G    V FP VF+GG++ GGL+++MA H++GE
Sbjct: 64  ADPAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGE 123

Query: 134 LVPALKDAGALWL 135
           LVP LK AGALWL
Sbjct: 124 LVPVLKQAGALWL 136

[Close]

BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 10  WIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVG 69
           ++PAAA     A E + + VE+L S++AVVV +   CCM H +K L  G GV+P V    
Sbjct: 13  YMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAV---- 72

Query: 70  EEDEVDIAG-EIEK-FSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALK 129
            E ++D  G ++E+  +   G G       PVVF+GGK+ G +++VMAAHI+G LVP LK
Sbjct: 73  HELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLK 132

Query: 130 DAGALWL 135
           +AGALWL
Sbjct: 133 EAGALWL 135

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BLAST of Lsi01G002810 vs. ExPASy TrEMBL
Match: U3RBI2 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX1 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.2e-58
Identity = 119/134 (88.81%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSSCKA E S DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG
Sbjct: 1   MHQAIPYRTWIPAAASSSCKAHEPSGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
            NP VV VGEEDEVD AGEI KF+ G GDG   RVQFPVVF+GGKMFGGLEKVMAAHISG
Sbjct: 61  ANPAVVVVGEEDEVDTAGEIGKFASGGGDG---RVQFPVVFIGGKMFGGLEKVMAAHISG 120

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 121 ELVPALKDAGALWL 131

[Close]

BLAST of Lsi01G002810 vs. ExPASy TrEMBL
Match: A0A6J1IR73 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111478640 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 117/138 (84.78%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDG----VEKLVSKNAVVVLARRGCCMSHVLKLLL 60
           MHQAIPYRTW+PAAASS  KAPEAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLL
Sbjct: 1   MHQAIPYRTWVPAAASSR-KAPEASADGAAASVEKLVSKNAVVVLARHGCCMSHVLKLLL 60

Query: 61  LGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAA 120
           LGHG NP V AVGEEDEV+IAGEI KF  G GDGN+ RVQ PVVFVGGKMFGGLEKVMAA
Sbjct: 61  LGHGANPAVFAVGEEDEVNIAGEIGKFVTGAGDGNEGRVQLPVVFVGGKMFGGLEKVMAA 120

Query: 121 HISGELVPALKDAGALWL 135
           HI+GELVPALKDAGALWL
Sbjct: 121 HIAGELVPALKDAGALWL 137

[Close]

BLAST of Lsi01G002810 vs. ExPASy TrEMBL
Match: A0A5D3CMJ3 (Glutaredoxin-C9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007790 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 115/134 (85.82%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSS KA E S DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG
Sbjct: 1   MHQAIPYRTWIPAAASSSRKAHEPSGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
            NP VV VGEEDEVD  GEI  F+   GDG   RVQFPVVF+GGKMFGGLEKVMAAHISG
Sbjct: 61  TNPAVVVVGEEDEVDTTGEIGNFASAAGDG---RVQFPVVFIGGKMFGGLEKVMAAHISG 120

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 121 ELVPALKDAGALWL 131

[Close]

BLAST of Lsi01G002810 vs. ExPASy TrEMBL
Match: A0A1S3B087 (glutaredoxin-C9 OS=Cucumis melo OX=3656 GN=LOC103484489 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 115/134 (85.82%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSS KA E S DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG
Sbjct: 1   MHQAIPYRTWIPAAASSSRKAHEPSGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
            NP VV VGEEDEVD  GEI  F+   GDG   RVQFPVVF+GGKMFGGLEKVMAAHISG
Sbjct: 61  TNPAVVVVGEEDEVDTTGEIGNFASAAGDG---RVQFPVVFIGGKMFGGLEKVMAAHISG 120

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 121 ELVPALKDAGALWL 131

[Close]

BLAST of Lsi01G002810 vs. ExPASy TrEMBL
Match: A0A6J1EDX5 (monothiol glutaredoxin-S9-like OS=Cucurbita moschata OX=3662 GN=LOC111433316 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.8e-54
Identity = 115/138 (83.33%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDG----VEKLVSKNAVVVLARRGCCMSHVLKLLL 60
           MHQAIPYRTW+PAAASS  KAPEA  DG    V KLVSKNAVVVLAR GCCMSHVLKLLL
Sbjct: 1   MHQAIPYRTWVPAAASSR-KAPEAPADGAAASVGKLVSKNAVVVLARHGCCMSHVLKLLL 60

Query: 61  LGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAA 120
           LGHG NP V AVGEEDEV+IAGEI KF  G GDGN+ RVQ PVVFVGGKMFGGLEKVMAA
Sbjct: 61  LGHGANPAVFAVGEEDEVNIAGEIGKFVTGAGDGNEGRVQLPVVFVGGKMFGGLEKVMAA 120

Query: 121 HISGELVPALKDAGALWL 135
           HI+GELVPALKDAGALWL
Sbjct: 121 HIAGELVPALKDAGALWL 137

[Close]

BLAST of Lsi01G002810 vs. NCBI nr
Match: XP_038881313.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 3.6e-64
Identity = 127/134 (94.78%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSSCKA E S DGVEKLVSKNAVVVLA+RGCCMSHVLKLLLLGHG
Sbjct: 21  MHQAIPYRTWIPAAASSSCKAAEPSGDGVEKLVSKNAVVVLAKRGCCMSHVLKLLLLGHG 80

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
           VNP VVAVGEEDEVDIAGEI KFSPGTGDGND RVQFPVVFVGGKMFGGLEKVMAAHISG
Sbjct: 81  VNPAVVAVGEEDEVDIAGEIGKFSPGTGDGNDGRVQFPVVFVGGKMFGGLEKVMAAHISG 140

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 141 ELVPALKDAGALWL 154

[Close]

BLAST of Lsi01G002810 vs. NCBI nr
Match: NP_001274395.1 (glutaredoxin [Cucumis sativus] >AGX01493.1 glutaredoxin [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 6.6e-58
Identity = 119/134 (88.81%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSSCKA E S DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG
Sbjct: 1   MHQAIPYRTWIPAAASSSCKAHEPSGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
            NP VV VGEEDEVD AGEI KF+ G GDG   RVQFPVVF+GGKMFGGLEKVMAAHISG
Sbjct: 61  ANPAVVVVGEEDEVDTAGEIGKFASGGGDG---RVQFPVVFIGGKMFGGLEKVMAAHISG 120

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 121 ELVPALKDAGALWL 131

[Close]

BLAST of Lsi01G002810 vs. NCBI nr
Match: XP_023543691.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55
Identity = 118/138 (85.51%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDG----VEKLVSKNAVVVLARRGCCMSHVLKLLL 60
           MHQAIPYRTW+PAAASS  KAPEAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLL
Sbjct: 1   MHQAIPYRTWVPAAASSR-KAPEASADGAAASVEKLVSKNAVVVLARHGCCMSHVLKLLL 60

Query: 61  LGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAA 120
           LGHG NP VVAVGEEDEV+IAGEI KF  G GDGN+ RVQ PVVFVGGKMFGGLEKVMAA
Sbjct: 61  LGHGANPAVVAVGEEDEVNIAGEIGKFVAGAGDGNEGRVQLPVVFVGGKMFGGLEKVMAA 120

Query: 121 HISGELVPALKDAGALWL 135
           HI+GELVPALKDAGALWL
Sbjct: 121 HIAGELVPALKDAGALWL 137

[Close]

BLAST of Lsi01G002810 vs. NCBI nr
Match: XP_022978780.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 4.0e-55
Identity = 117/138 (84.78%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDG----VEKLVSKNAVVVLARRGCCMSHVLKLLL 60
           MHQAIPYRTW+PAAASS  KAPEAS DG    VEKLVSKNAVVVLAR GCCMSHVLKLLL
Sbjct: 1   MHQAIPYRTWVPAAASSR-KAPEASADGAAASVEKLVSKNAVVVLARHGCCMSHVLKLLL 60

Query: 61  LGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAA 120
           LGHG NP V AVGEEDEV+IAGEI KF  G GDGN+ RVQ PVVFVGGKMFGGLEKVMAA
Sbjct: 61  LGHGANPAVFAVGEEDEVNIAGEIGKFVTGAGDGNEGRVQLPVVFVGGKMFGGLEKVMAA 120

Query: 121 HISGELVPALKDAGALWL 135
           HI+GELVPALKDAGALWL
Sbjct: 121 HIAGELVPALKDAGALWL 137

[Close]

BLAST of Lsi01G002810 vs. NCBI nr
Match: XP_008439802.2 (PREDICTED: glutaredoxin-C9 [Cucumis melo] >KAA0052658.1 glutaredoxin-C9 [Cucumis melo var. makuwa] >TYK13167.1 glutaredoxin-C9 [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 5.3e-55
Identity = 115/134 (85.82%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MHQAIPYRTWIPAAASSSCKAPEASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60
           MHQAIPYRTWIPAAASSS KA E S DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG
Sbjct: 1   MHQAIPYRTWIPAAASSSRKAHEPSGDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHG 60

Query: 61  VNPTVVAVGEEDEVDIAGEIEKFSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISG 120
            NP VV VGEEDEVD  GEI  F+   GDG   RVQFPVVF+GGKMFGGLEKVMAAHISG
Sbjct: 61  TNPAVVVVGEEDEVDTTGEIGNFASAAGDG---RVQFPVVFIGGKMFGGLEKVMAAHISG 120

Query: 121 ELVPALKDAGALWL 135
           ELVPALKDAGALWL
Sbjct: 121 ELVPALKDAGALWL 131

[Close]

BLAST of Lsi01G002810 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.5e-28
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 23  EASDDGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEK 82
           + + + V  +V +NAV+V+ RRGCCM HV++ LLLG GVNP V+ + EE E ++  E+E 
Sbjct: 29  QGNGERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELEN 88

Query: 83  FSPGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
                G G    V+ P V+VGG++FGGL++VMA HISGELVP LK+ GALWL
Sbjct: 89  IGVQGGGGT---VKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Lsi01G002810 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 111.3 bits (277), Expect = 6.0e-25
Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 32  LVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGN 91
           +V +NAVVV ARRGCC+ HV K LLL HGVNP VV +GEED  +    +           
Sbjct: 59  VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVSD--------- 118

Query: 92  DRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
             + + P++++GGK+FGGLE +MAAHI+G+LVP L+ AGALWL
Sbjct: 119 --KEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Lsi01G002810 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 27  DGVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPG 86
           + ++K++S+ +VV+ ++  CCMSH +K L L  GVNPT+    E DE++I  EIE+    
Sbjct: 2   ENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIY---ELDEINIGREIEQALAQ 61

Query: 87  TGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
            G         PVVF+GG++ GG  +VM+ H++  LVP LK AGALWL
Sbjct: 62  LGCS----PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Lsi01G002810 vs. TAIR 10
Match: AT1G03850.1 (Glutaredoxin family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 32  LVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEEDEVDIAGEIEKFSPGTGDGN 91
           +V +NAVVV ARRGCC+ HV K LLL HGVNP VV +GEED  +    +           
Sbjct: 59  VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVSD--------- 118

Query: 92  DRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKD 129
             + + P++++GGK+FGGLE +MAAHI+G  +    D
Sbjct: 119 --KEKLPMMYIGGKLFGGLENLMAAHINGHSIKIRTD 144

[Close]

BLAST of Lsi01G002810 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 29  VEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPTVVAVGEED----EVDIAGEIEKFS 88
           +E + ++NAVV+ +   CCM H +K L  G GV+P   AV E D     V+I   + +  
Sbjct: 34  IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSP---AVHELDLLPYGVEIHRALLRLL 93

Query: 89  PGTGDGNDRRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 135
             +  G       PVVF+GGKM G +E+VMA+HI+G LVP LKDAGALWL
Sbjct: 94  GCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

The following BLAST results are available for this feature:

BLAST of Lsi01G002810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	6.3e-27	51.79	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	2.9e-24	46.85	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q84TF4	8.5e-24	52.43	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2	[more]
Q0JP62	5.5e-23	45.86	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q0JDM4	1.5e-20	44.88	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]

BLAST of Lsi01G002810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
U3RBI2	3.2e-58	88.81	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX1 PE=2 SV=1	[more]
A0A6J1IR73	1.9e-55	84.78	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111478640 PE=3 SV=1	[more]
A0A5D3CMJ3	2.5e-55	85.82	Glutaredoxin-C9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0077...	[more]
A0A1S3B087	2.5e-55	85.82	glutaredoxin-C9 OS=Cucumis melo OX=3656 GN=LOC103484489 PE=3 SV=1	[more]
A0A6J1EDX5	4.8e-54	83.33	monothiol glutaredoxin-S9-like OS=Cucurbita moschata OX=3662 GN=LOC111433316 PE=...	[more]

BLAST of Lsi01G002810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881313.1	3.6e-64	94.78	glutaredoxin-C9-like [Benincasa hispida]	[more]
NP_001274395.1	6.6e-58	88.81	glutaredoxin [Cucumis sativus] >AGX01493.1 glutaredoxin [Cucumis sativus]	[more]
XP_023543691.1	1.1e-55	85.51	glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978780.1	4.0e-55	84.78	glutaredoxin-C9-like [Cucurbita maxima]	[more]
XP_008439802.2	5.3e-55	85.82	PREDICTED: glutaredoxin-C9 [Cucumis melo] >KAA0052658.1 glutaredoxin-C9 [Cucumis...	[more]

BLAST of Lsi01G002810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	4.5e-28	51.79	Thioredoxin superfamily protein	[more]
AT1G03850.2	6.0e-25	52.43	Glutaredoxin family protein	[more]
AT4G15690.1	2.2e-19	43.52	Thioredoxin superfamily protein	[more]
AT1G03850.1	1.1e-18	46.39	Glutaredoxin family protein	[more]
AT5G14070.1	2.5e-18	45.45	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 38..106 e-value: 8.3E-6 score: 25.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 20..133 e-value: 9.8E-23 score: 82.0
None	No IPR available	PANTHER	PTHR10168:SF111	MONOTHIOL GLUTAREDOXIN-S9	coord: 23..134
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 26..133 score: 19.016916
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 29..134 e-value: 1.0E-32 score: 110.0
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 23..134
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 29..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G002810.1	Lsi01G002810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity