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Lsi01G002600 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTTGGCCTCCTACTGTTTTGTCGGCTCTGTTTCTCGACAACTTCAACCAAAATTTGCGACTGAGTTATATCGCCCAGCGCTGTTGGGTTCCAAAGACAGCTTTCACATTGCCCTGATCGCCGACGAAGACTCGGCCGGAACCATTCATAAACGAGAGGTGGCGCGTCAGTCACCGGGAGGCCCTGATCCCCGCCACCACTAA ATGTTGTTGGCCTCCTACTGTTTTGTCGGCTCTGTTTCTCGACAACTTCAACCAAAATTTGCGACTGAGTTATATCGCCCAGCGCTGTTGGGTTCCAAAGACAGCTTTCACATTGCCCTGATCGCCGACGAAGACTCGGCCGGAACCATTCATAAACGAGAGGTGGCGCGTCAGTCACCGGGAGGCCCTGATCCCCGCCACCACTAA ATGTTGTTGGCCTCCTACTGTTTTGTCGGCTCTGTTTCTCGACAACTTCAACCAAAATTTGCGACTGAGTTATATCGCCCAGCGCTGTTGGGTTCCAAAGACAGCTTTCACATTGCCCTGATCGCCGACGAAGACTCGGCCGGAACCATTCATAAACGAGAGGTGGCGCGTCAGTCACCGGGAGGCCCTGATCCCCGCCACCACTAA MLLASYCFVGSVSRQLQPKFATELYRPALLGSKDSFHIALIADEDSAGTIHKREVARQSPGGPDPRHH Homology
BLAST of Lsi01G002600 vs. ExPASy TrEMBL
Match: A0A0A0KNI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518900 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.5e-16 Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of Lsi01G002600 vs. ExPASy TrEMBL
Match: A0A5A7UEP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008020 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.5e-15 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of Lsi01G002600 vs. ExPASy TrEMBL
Match: A0A0A0KLM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518910 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Lsi01G002600 vs. NCBI nr
Match: KAA0052636.1 (hypothetical protein E6C27_scaffold120G002460 [Cucumis melo var. makuwa] >TYK13190.1 hypothetical protein E5676_scaffold255G008020 [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of Lsi01G002600 vs. NCBI nr
Match: KAE8647712.1 (hypothetical protein Csa_003203 [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 2.1e-12 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Lsi01G002600 vs. NCBI nr
Match: KAE8647711.1 (hypothetical protein Csa_003452 [Cucumis sativus]) HSP 1 Score: 77.4 bits (189), Expect = 5.3e-11 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Lsi01G002600 vs. NCBI nr
Match: KAG6581347.1 (hypothetical protein SDJN03_21349, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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