Lsi01G002020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G002020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr01: 1890922 .. 1891341 (-)
RNA-Seq Expression	Lsi01G002020
Synteny	Lsi01G002020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAGAATTCCACGAATCCGACATCATATTCGCCGACCGCCAACGTCGCCGCCGCCGCCTTTTCCATCCTTCACTCGACTACGCCCAAATCCTCCTCACAACGCGTCGGAACTCCACCGACGACGACGATAACAACGACAACGACAACAACAACAACAACAAAGATTTCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGCTGGAAGAGGAATGGGACAGTGAAGACAACAACATAGTACCGCCACACGTCATCATAGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA

mRNA sequence

ATGGCCGAAGAATTCCACGAATCCGACATCATATTCGCCGACCGCCAACGTCGCCGCCGCCGCCTTTTCCATCCTTCACTCGACTACGCCCAAATCCTCCTCACAACGCGTCGGAACTCCACCGACGACGACGATAACAACGACAACGACAACAACAACAACAACAAAGATTTCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGCTGGAAGAGGAATGGGACAGTGAAGACAACAACATAGTACCGCCACACGTCATCATAGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA

Coding sequence (CDS)

ATGGCCGAAGAATTCCACGAATCCGACATCATATTCGCCGACCGCCAACGTCGCCGCCGCCGCCTTTTCCATCCTTCACTCGACTACGCCCAAATCCTCCTCACAACGCGTCGGAACTCCACCGACGACGACGATAACAACGACAACGACAACAACAACAACAACAAAGATTTCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTTCCGTTACAGTTCCGACATGGAGGAGCTGGAAGAGGAATGGGACAGTGAAGACAACAACATAGTACCGCCACACGTCATCATAGGGCGGCGCGTGGCCGGAAAAATGGCTTTCTCCGTCTGCACCGGCAACGGTAGGACGCTTAAAGGAAGAGATTTAAGTCAAGTTCGAAATTCTATTCTCAGAATGACCGGATTCCTCGAAACTTGA

Protein sequence

MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET

Homology

[Close]

BLAST of Lsi01G002020 vs. ExPASy TrEMBL
Match: A0A1S3AZZ7 (uncharacterized protein LOC103484414 OS=Cucumis melo OX=3656 GN=LOC103484414 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND--- 60
           MAEEFHESDIIFAD  R+RRRRR FHPSLD+AQILLTT      RN+T+DD+++D+D   
Sbjct: 1   MAEEFHESDIIFADHHRRRRRRRFFHPSLDFAQILLTTTNHRNPRNNTNDDNDSDSDHND 60

Query: 61  ---NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSED-NNIVPPHVIIGRRVAGKM 120
              +NNNNKDFAASLPVKIPETVFRYSSDMEEL+EEW+SED NNIVPPHVIIGRRVAGKM
Sbjct: 61  HHHHNNNNKDFAASLPVKIPETVFRYSSDMEELDEEWNSEDNNNIVPPHVIIGRRVAGKM 120

Query: 121 AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET 140
           AFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Sbjct: 121 AFSVRSGNGRTLKGRDLSEVRNSILRMTGFLET 153

[Close]

BLAST of Lsi01G002020 vs. ExPASy TrEMBL
Match: A0A0A0KNP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520440 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.2e-53
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN 60
           MAEEFHESDIIFAD     +RRRRR FHPSLD+AQILLTT     RN+T+DD ++D+D N
Sbjct: 1   MAEEFHESDIIFADHHHHYRRRRRRFFHPSLDFAQILLTTTHRNTRNNTNDDSDSDSDRN 60

Query: 61  -----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSED-NNIVPPHVIIGRRVAGKM 120
                NN+KDFAASLPVKIPETVFRYSSDMEEL+EEW+SED NNIVPPHVIIG+R++GKM
Sbjct: 61  HHHHHNNSKDFAASLPVKIPETVFRYSSDMEELDEEWNSEDNNNIVPPHVIIGQRLSGKM 120

Query: 121 AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET 140
           AFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Sbjct: 121 AFSVRSGNGRTLKGRDLSEVRNSILRMTGFLET 153

[Close]

BLAST of Lsi01G002020 vs. ExPASy TrEMBL
Match: A0A6J1EG03 (uncharacterized protein LOC111433041 OS=Cucurbita moschata OX=3662 GN=LOC111433041 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.0e-46
Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDF 60
           MAEEFH+SD+I AD     RRLFHPSLDYA  QI +TT R+S        ND N+N+KD 
Sbjct: 1   MAEEFHDSDVIIAD----HRRLFHPSLDYAHTQIPITTHRSSR-------NDTNSNSKDS 60

Query: 61  AASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120
           AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPH+IIGRRVAGKMAFS+CTGNGRT
Sbjct: 61  AASLPVKIPETVYRYNSSDMEEVDEDWDIED-NIVPPHLIIGRRVAGKMAFSLCTGNGRT 120

Query: 121 LKGRDLSQVRNSILRMTGFLET 140
           LKGRDLSQVRNSIL+MTGFLET
Sbjct: 121 LKGRDLSQVRNSILKMTGFLET 130

[Close]

BLAST of Lsi01G002020 vs. ExPASy TrEMBL
Match: A0A6J1IQW7 (uncharacterized protein LOC111477622 OS=Cucurbita maxima OX=3661 GN=LOC111477622 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.5e-46
Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDF 60
           MAEEFH+SD+I AD     R LFHPSLDYA  QIL+TT R+S        ND N+N+KD 
Sbjct: 1   MAEEFHDSDVIIAD----HRHLFHPSLDYAHTQILITTHRSSR-------NDANSNSKDS 60

Query: 61  AASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120
           AASLPVKIPETV+RY SSDMEE++E+WD +D +IVPPHVIIGRRVAGKMAFS+CTGNGRT
Sbjct: 61  AASLPVKIPETVYRYNSSDMEEVDEDWDIDD-DIVPPHVIIGRRVAGKMAFSLCTGNGRT 120

Query: 121 LKGRDLSQVRNSILRMTGFLET 140
           LKGRDLSQVRNSILRMTGFLET
Sbjct: 121 LKGRDLSQVRNSILRMTGFLET 130

[Close]

BLAST of Lsi01G002020 vs. ExPASy TrEMBL
Match: A0A6J1KS02 (uncharacterized protein LOC111497106 OS=Cucurbita maxima OX=3661 GN=LOC111497106 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.3e-43
Identity = 98/139 (70.50%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAA 60
           MAEEFHESDIIF+D     RRLFH SLD+ QIL+T  RNS           NNN    A+
Sbjct: 1   MAEEFHESDIIFSD--HHHRRLFHSSLDHTQILVTPHRNS----------KNNNKHSAAS 60

Query: 61  SLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRTLKG 120
           SLP+KIPETV R++SD EEL+EEWDS+D NIVPPH+II RR+AGKMAFSVCTGNGRTLKG
Sbjct: 61  SLPIKIPETVIRFTSDAEELDEEWDSDD-NIVPPHMIIRRRLAGKMAFSVCTGNGRTLKG 120

Query: 121 RDLSQVRNSILRMTGFLET 140
           RDL+ VRNSILRMTGFLET
Sbjct: 121 RDLNHVRNSILRMTGFLET 126

[Close]

BLAST of Lsi01G002020 vs. NCBI nr
Match: XP_038881487.1 (uncharacterized protein LOC120073009 [Benincasa hispida])

HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57
Identity = 119/142 (83.80%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTRRNSTDD-DDNNDNDNNNNNKD 60
           MAEEFHESDI+FAD  R++RRR  FHPSLDY QIL+TT  NS ++ +D+ D++NNNNNKD
Sbjct: 1   MAEEFHESDIVFADHHRRQRRRHFFHPSLDYTQILVTTHGNSRNNTNDDGDDNNNNNNKD 60

Query: 61  FAASLPVKIPETVFRYSSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120
           F ASLPVKIPETVFRY+SDMEEL+EEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT
Sbjct: 61  FIASLPVKIPETVFRYTSDMEELDEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120

Query: 121 LKGRDLSQVRNSILRMTGFLET 140
           LKGRDLSQVRNSILRMTGFLET
Sbjct: 121 LKGRDLSQVRNSILRMTGFLET 142

[Close]

BLAST of Lsi01G002020 vs. NCBI nr
Match: XP_008439696.1 (PREDICTED: uncharacterized protein LOC103484414 [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 4.2e-55
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MAEEFHESDIIFAD--RQRRRRRLFHPSLDYAQILLTTR-----RNSTDDDDNNDND--- 60
           MAEEFHESDIIFAD  R+RRRRR FHPSLD+AQILLTT      RN+T+DD+++D+D   
Sbjct: 1   MAEEFHESDIIFADHHRRRRRRRFFHPSLDFAQILLTTTNHRNPRNNTNDDNDSDSDHND 60

Query: 61  ---NNNNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSED-NNIVPPHVIIGRRVAGKM 120
              +NNNNKDFAASLPVKIPETVFRYSSDMEEL+EEW+SED NNIVPPHVIIGRRVAGKM
Sbjct: 61  HHHHNNNNKDFAASLPVKIPETVFRYSSDMEELDEEWNSEDNNNIVPPHVIIGRRVAGKM 120

Query: 121 AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET 140
           AFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Sbjct: 121 AFSVRSGNGRTLKGRDLSEVRNSILRMTGFLET 153

[Close]

BLAST of Lsi01G002020 vs. NCBI nr
Match: XP_004134921.2 (uncharacterized protein LOC101217175 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MAEEFHESDIIFADR----QRRRRRLFHPSLDYAQILLTT----RRNSTDDDDNNDNDNN 60
           MAEEFHESDIIFAD     +RRRRR FHPSLD+AQILLTT     RN+T+DD ++D+D N
Sbjct: 1   MAEEFHESDIIFADHHHHYRRRRRRFFHPSLDFAQILLTTTHRNTRNNTNDDSDSDSDRN 60

Query: 61  -----NNNKDFAASLPVKIPETVFRYSSDMEELEEEWDSED-NNIVPPHVIIGRRVAGKM 120
                NN+KDFAASLPVKIPETVFRYSSDMEEL+EEW+SED NNIVPPHVIIG+R++GKM
Sbjct: 61  HHHHHNNSKDFAASLPVKIPETVFRYSSDMEELDEEWNSEDNNNIVPPHVIIGQRLSGKM 120

Query: 121 AFSVCTGNGRTLKGRDLSQVRNSILRMTGFLET 140
           AFSV +GNGRTLKGRDLS+VRNSILRMTGFLET
Sbjct: 121 AFSVRSGNGRTLKGRDLSEVRNSILRMTGFLET 153

[Close]

BLAST of Lsi01G002020 vs. NCBI nr
Match: XP_023544879.1 (uncharacterized protein LOC111804348 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 9.3e-47
Identity = 108/142 (76.06%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDF 60
           MAEEFH+SD+I AD     RRLFHPSLDYA  QIL+TT R+S      ND + N N+KD 
Sbjct: 1   MAEEFHDSDVIIAD----HRRLFHPSLDYAHTQILITTHRSS-----RNDTNTNTNSKDS 60

Query: 61  AASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120
           AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPHVIIGRRVAGKMAFS+CTGNGRT
Sbjct: 61  AASLPVKIPETVYRYNSSDMEEMDEDWDIED-NIVPPHVIIGRRVAGKMAFSLCTGNGRT 120

Query: 121 LKGRDLSQVRNSILRMTGFLET 140
           LKGRDLSQVRNSIL+MTGFLET
Sbjct: 121 LKGRDLSQVRNSILKMTGFLET 132

[Close]

BLAST of Lsi01G002020 vs. NCBI nr
Match: XP_022925703.1 (uncharacterized protein LOC111433041 [Cucurbita moschata] >KAG7034675.1 hypothetical protein SDJN02_04405, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYA--QILLTTRRNSTDDDDNNDNDNNNNNKDF 60
           MAEEFH+SD+I AD     RRLFHPSLDYA  QI +TT R+S        ND N+N+KD 
Sbjct: 1   MAEEFHDSDVIIAD----HRRLFHPSLDYAHTQIPITTHRSSR-------NDTNSNSKDS 60

Query: 61  AASLPVKIPETVFRY-SSDMEELEEEWDSEDNNIVPPHVIIGRRVAGKMAFSVCTGNGRT 120
           AASLPVKIPETV+RY SSDMEE++E+WD ED NIVPPH+IIGRRVAGKMAFS+CTGNGRT
Sbjct: 61  AASLPVKIPETVYRYNSSDMEEVDEDWDIED-NIVPPHLIIGRRVAGKMAFSLCTGNGRT 120

Query: 121 LKGRDLSQVRNSILRMTGFLET 140
           LKGRDLSQVRNSIL+MTGFLET
Sbjct: 121 LKGRDLSQVRNSILKMTGFLET 130

[Close]

BLAST of Lsi01G002020 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 107.8 bits (268), Expect = 6.9e-24
Identity = 65/148 (43.92%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 1   MAEEFHESDIIFAD------RQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNN 60
           MAEEF ES+++F+D       +    RLF   ++  +    TRR                
Sbjct: 1   MAEEFDESEVVFSDGLSSVLHKENENRLFGSDMERKK----TRRIKR---------TTTE 60

Query: 61  NKDFAASLPVKIPETVFRYSSDMEE---LEEEWDSEDNNIVPPHVIIGRRV-AGKMAFSV 120
               ++SLPV IPE +FR     EE    EEE+      ++PPH++IGRR+  G+MAFSV
Sbjct: 61  KASLSSSLPVSIPENIFRRYVGKEEDEYSEEEYSEGGGEMIPPHIMIGRRIQGGQMAFSV 120

Query: 121 CTGNGRTLKGRDLSQVRNSILRMTGFLE 139
           C+G+GRTLKGRDLS+VRNS+LR+TGFLE
Sbjct: 121 CSGSGRTLKGRDLSRVRNSVLRLTGFLE 135

[Close]

BLAST of Lsi01G002020 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 95.1 bits (235), Expect = 4.6e-20
Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNN-----N 60
           M+EEF ES+IIF+D     RR               R +  + ++N   D   N     N
Sbjct: 1   MSEEFDESEIIFSDNYFPIRR---------------REDGNEKENNRPVDFRENSERVWN 60

Query: 61  KDFAASLPVKIPETVFRYSSDME--------ELEEEWDSED--NNIVPPHVIIGRRV-AG 120
           K    S    +P  V  +SS +           EEE+  +D    ++PPH+I+GRR+  G
Sbjct: 61  KSSRRSKTTPLPSAVTAFSSSLPVNIPMRRYSTEEEYSDDDGGRKMIPPHLIVGRRMEGG 120

Query: 121 KMAFSVCTGNGRTLKGRDLSQVRNSILRMTGFLE 139
           +MAFSVCTGNGRTLKGRDLS+VRNS+L++TGFLE
Sbjct: 121 QMAFSVCTGNGRTLKGRDLSRVRNSVLKLTGFLE 139

[Close]

BLAST of Lsi01G002020 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAA 60
           M+EEF ESDIIF+D+              ++I  ++R     +  N++      ++    
Sbjct: 1   MSEEFQESDIIFSDQ--------------SKISTSSRYTKLYNSRNDEKKGTRRHETAEK 60

Query: 61  SLPVKIPETVFRYSSDMEELEEEWDS--EDNNIVPPHVIIGRRVAGKMAFSVCTGNGRTL 120
           + PV+IP   FR          EWD+  E+++  PPHVII RR+  ++AFS C     TL
Sbjct: 61  TSPVRIPTNNFRCL--------EWDTTEEEDDKTPPHVIIERRMKEQIAFSAC-----TL 113

Query: 121 KGRDLSQVRNSILRMTGFLE 139
           KGRDLS+ RNS+LRMTGFLE
Sbjct: 121 KGRDLSRHRNSVLRMTGFLE 113

[Close]

BLAST of Lsi01G002020 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 )

HSP 1 Score: 71.2 bits (173), Expect = 7.2e-13
Identity = 54/140 (38.57%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 1   MAEEFHESDIIFADRQRRRRRLFHPSLDYAQILLTTRRNSTDDDDNNDNDNNNNNKDFAA 60
           M+EEF ES++IF+D                     TR+++    +N + +  +  KD  +
Sbjct: 1   MSEEFQESEVIFSDES------------------FTRKDNKISHNNENYERKSTEKDKIS 60

Query: 61  SLPVKIP-ETVFRYSSDMEELEEEWDSEDNNIVPPHVII-GRRVAGKMAFSVCTGNGRTL 120
           S PV+IP  T  RY+            E+  + PPHVII  RR   +MAFS C     TL
Sbjct: 61  S-PVRIPSRTTIRYT-----------EEEGEMTPPHVIIEKRRTEAQMAFSFC-----TL 105

Query: 121 KGRDLSQVRNSILRMTGFLE 139
           KGRDLS+ RN++LRMTGFLE
Sbjct: 121 KGRDLSRHRNTVLRMTGFLE 105

[Close]

BLAST of Lsi01G002020 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 68.2 bits (165), Expect = 6.1e-12
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 60  ASLPVKIPE--TVFRYS-SDMEELEEEW---DSEDNNIVPPHVIIGRRVAGKM--AFSVC 119
           +S P+ IP+   V+ YS  +       W   D ++ ++VPPH ++ +R+A     +FS+C
Sbjct: 59  SSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMC 118

Query: 120 TGNGRTLKGRDLSQVRNSILRMTGFLET 140
            G GRTLKGRDLS+ RN++L  TGFLE+
Sbjct: 119 EGIGRTLKGRDLSKTRNAVLTRTGFLES 146

The following BLAST results are available for this feature:

BLAST of Lsi01G002020 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G002020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZZ7	2.0e-55	80.39	uncharacterized protein LOC103484414 OS=Cucumis melo OX=3656 GN=LOC103484414 PE=...	[more]
A0A0A0KNP6	7.2e-53	77.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520440 PE=4 SV=1	[more]
A0A6J1EG03	5.0e-46	74.65	uncharacterized protein LOC111433041 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1IQW7	8.5e-46	74.65	uncharacterized protein LOC111477622 OS=Cucurbita maxima OX=3661 GN=LOC111477622...	[more]
A0A6J1KS02	2.3e-43	70.50	uncharacterized protein LOC111497106 OS=Cucurbita maxima OX=3661 GN=LOC111497106...	[more]

BLAST of Lsi01G002020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881487.1	1.5e-57	83.80	uncharacterized protein LOC120073009 [Benincasa hispida]	[more]
XP_008439696.1	4.2e-55	80.39	PREDICTED: uncharacterized protein LOC103484414 [Cucumis melo]	[more]
XP_004134921.2	1.5e-52	77.12	uncharacterized protein LOC101217175 [Cucumis sativus]	[more]
XP_023544879.1	9.3e-47	76.06	uncharacterized protein LOC111804348 [Cucurbita pepo subsp. pepo]	[more]
XP_022925703.1	1.0e-45	74.65	uncharacterized protein LOC111433041 [Cucurbita moschata] >KAG7034675.1 hypothet...	[more]

BLAST of Lsi01G002020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34340.1	6.9e-24	43.92	Protein of unknown function, DUF584	[more]
AT1G29640.1	4.6e-20	41.56	Protein of unknown function, DUF584	[more]
AT5G45630.1	1.2e-15	39.29	Protein of unknown function, DUF584	[more]
AT4G18980.1	7.2e-13	38.57	AtS40-3	[more]
AT4G21970.1	6.1e-12	42.05	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 37..138 e-value: 2.0E-28 score: 100.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..60
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 1..138
None	No IPR available	PANTHER	PTHR33083:SF49	OS01G0748300 PROTEIN	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G002020.1	Lsi01G002020.1	mRNA