Lsi01G001880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G001880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01: 1805183 .. 1807069 (-)
RNA-Seq ExpressionLsi01G001880
SyntenyLsi01G001880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATTGGGGGTTACGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGATTTCATGGAATTCTATGCTCAAAGGGTGTCTCAAATGCGGGGATTTAAGTATGGCTTGTAACATGTTCGACAAAATGTCTGAAAGGAATGTCGTTTCTTGGACGACGATTATTGATGGGCTGCTGGAGTTCGGGAGAGTTGAGGTTGCTGTGCGCTTGTTCTGGGAGATGCCCACTAGGGATGTAGCTGCCTGGAATTCAATGGTTCATGGATTTTTTAGTAATGGTAGAGTTGAAGATGCTATAGAGTTGTTTCAGAAAATGCCTTCTCAGAACGTGATTTCATGGACTTCGGTCATTGGTGGGCTTGACCAGAATGGAAGGAGTTTTGAAGCTCTAGTAGTTTTCCAAAAGATGTTGGCTTCCTTTTTCAAACCCACTTCAAGCACATTGGCCTGTGCATTGACAGCTTGTGCAAACATATGTGCTTCCTTCATAGGTGTTCAGATTCATGGTCTAATTTTTAAGACTGGTTATTGCTTTGATGAGTATGTATCTGCTTCCCTTGTAACATTTTATGCCAACTGCAAGCTTATAGAGAATGCTTCAAGCATTTTCAAAGATAGCATGTGCAGAAATGTCGTGGTCTGGACAGCTCTTTTAACGGGATATGGATCGAACTGTAAGCACGAAGATGCATTACAGGTTTTCAAGGGCATGATGAGAATGTGTGTACTTCCTAATCAATCTTCTCTTACTAGTGCTCTCAATTCATGTTGTGGATTAGAGGCTGTTGATAAAGGCAGGGAAGTTCATACTGTAGCCCACAAGCTAGGTTTGGAAAATGATATCTTTGTCAGTAATTCTCTTGTTGTCATGTATACTAAATGTGGACATATTAATGATGGGGTTGCTGTCTTCACAAGAATGTCTAGAAAGAATGTTGTGTCCTGGAATTCAATTATTGTTGGATGTGCCCAACATGGTTTTGGTATGTGCGCTTTAACTCTATTTGCTCAAATGATTCGTATGAGGGTGGATCCAGACGAAATCACGCTCGTGGGACTACTTTCTGCCTGTAGCCATTCTGGGATGTTAACAAAAGGTAGATGCTTTTTCAAACATTTTGGTAAAAACTTGTGTATTGAGATGACAAACGAGCATTATGCTTCTATGATCGACCTCTTAGGTCGATGCGGCCAATTGGAAGAAGCGGAAGCGTTAATTCATAACATGCCTGGTAAAGCAAACTACATGGTGTGGCTTGTATTGCTTAGCAGTTCCACCAACCATTCTAATGTGGATGTAGCTGAAAGAGCAGCAAAATGTGTGTTGGATCTACAACCAAACTGTAGTGCTGCTTATACATTACTCTCAAATTTATATGCTTCTACTGGCAAATGGACTGAAGTTTCCAAAATAAGGAAAAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGCTGGATTACAATTAAAGGGATCAAGCACAATTTCCTTTCGGGAGATCTGTCTCATCCGTTGAGCAGAAAGATACACCAAAAGTTGGAATGGCTAGGTGGAAAGTTGAAGGAACTGGGTTATGTGCCTGATCCTAAATTCTCCTTGCACGATGTCGAGACGGAGCAAAAGGAAGAGATGCTGTCTTATCATAGTGAGAGAATTGCTATTGGGTTTGGATTAATCAGTACAGTTGAGGGTAGCACAATAACAGTAATGAAAAACCTCCGCATCTGTGGTGATTGCCATAATGCCATCAAGCTAATATCGAGAGTTGTTGGTCGCAAAATCGTCGTAAGAGACACGAGCCGCTTTCATCACTTTCGTAGCGGAACCTGTTCTTGTGGAGATTACTGGTAG

mRNA sequence

ATGATGATTGGGGGTTACGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGATTTCATGGAATTCTATGCTCAAAGGGTGTCTCAAATGCGGGGATTTAAGTATGGCTTGTAACATGTTCGACAAAATGTCTGAAAGGAATGTCGTTTCTTGGACGACGATTATTGATGGGCTGCTGGAGTTCGGGAGAGTTGAGGTTGCTGTGCGCTTGTTCTGGGAGATGCCCACTAGGGATGTAGCTGCCTGGAATTCAATGGTTCATGGATTTTTTAGTAATGGTAGAGTTGAAGATGCTATAGAGTTGTTTCAGAAAATGCCTTCTCAGAACGTGATTTCATGGACTTCGGTCATTGGTGGGCTTGACCAGAATGGAAGGAGTTTTGAAGCTCTAGTAGTTTTCCAAAAGATGTTGGCTTCCTTTTTCAAACCCACTTCAAGCACATTGGCCTGTGCATTGACAGCTTGTGCAAACATATGTGCTTCCTTCATAGGTGTTCAGATTCATGGTCTAATTTTTAAGACTGGTTATTGCTTTGATGAGTATGTATCTGCTTCCCTTGTAACATTTTATGCCAACTGCAAGCTTATAGAGAATGCTTCAAGCATTTTCAAAGATAGCATGTGCAGAAATGTCGTGGTCTGGACAGCTCTTTTAACGGGATATGGATCGAACTGTAAGCACGAAGATGCATTACAGGTTTTCAAGGGCATGATGAGAATGTGTGTACTTCCTAATCAATCTTCTCTTACTAGTGCTCTCAATTCATGTTGTGGATTAGAGGCTGTTGATAAAGGCAGGGAAGTTCATACTGTAGCCCACAAGCTAGGTTTGGAAAATGATATCTTTGTCAGTAATTCTCTTGTTGTCATGTATACTAAATGTGGACATATTAATGATGGGGTTGCTGTCTTCACAAGAATGTCTAGAAAGAATGTTGTGTCCTGGAATTCAATTATTGTTGGATGTGCCCAACATGGTTTTGGTATGTGCGCTTTAACTCTATTTGCTCAAATGATTCGTATGAGGGTGGATCCAGACGAAATCACGCTCGTGGGACTACTTTCTGCCTGTAGCCATTCTGGGATGTTAACAAAAGGTAGATGCTTTTTCAAACATTTTGGTAAAAACTTGTGTATTGAGATGACAAACGAGCATTATGCTTCTATGATCGACCTCTTAGGTCGATGCGGCCAATTGGAAGAAGCGGAAGCGTTAATTCATAACATGCCTGGTAAAGCAAACTACATGGTGTGGCTTGTATTGCTTAGCAGTTCCACCAACCATTCTAATGTGGATGTAGCTGAAAGAGCAGCAAAATGTGTGTTGGATCTACAACCAAACTGTAGTGCTGCTTATACATTACTCTCAAATTTATATGCTTCTACTGGCAAATGGACTGAAGTTTCCAAAATAAGGAAAAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGCTGGATTACAATTAAAGGGATCAAGCACAATTTCCTTTCGGGAGATCTGTCTCATCCGTTGAGCAGAAAGATACACCAAAAGTTGGAATGGCTAGGTGGAAAGTTGAAGGAACTGGGTTATGTGCCTGATCCTAAATTCTCCTTGCACGATGTCGAGACGGAGCAAAAGGAAGAGATGCTGTCTTATCATAGTGAGAGAATTGCTATTGGGTTTGGATTAATCAGTACAGTTGAGGGTAGCACAATAACAGTAATGAAAAACCTCCGCATCTGTGGTGATTGCCATAATGCCATCAAGCTAATATCGAGAGTTGTTGGTCGCAAAATCGTCGTAAGAGACACGAGCCGCTTTCATCACTTTCGTAGCGGAACCTGTTCTTGTGGAGATTACTGGTAG

Coding sequence (CDS)

ATGATGATTGGGGGTTACGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGATTTCATGGAATTCTATGCTCAAAGGGTGTCTCAAATGCGGGGATTTAAGTATGGCTTGTAACATGTTCGACAAAATGTCTGAAAGGAATGTCGTTTCTTGGACGACGATTATTGATGGGCTGCTGGAGTTCGGGAGAGTTGAGGTTGCTGTGCGCTTGTTCTGGGAGATGCCCACTAGGGATGTAGCTGCCTGGAATTCAATGGTTCATGGATTTTTTAGTAATGGTAGAGTTGAAGATGCTATAGAGTTGTTTCAGAAAATGCCTTCTCAGAACGTGATTTCATGGACTTCGGTCATTGGTGGGCTTGACCAGAATGGAAGGAGTTTTGAAGCTCTAGTAGTTTTCCAAAAGATGTTGGCTTCCTTTTTCAAACCCACTTCAAGCACATTGGCCTGTGCATTGACAGCTTGTGCAAACATATGTGCTTCCTTCATAGGTGTTCAGATTCATGGTCTAATTTTTAAGACTGGTTATTGCTTTGATGAGTATGTATCTGCTTCCCTTGTAACATTTTATGCCAACTGCAAGCTTATAGAGAATGCTTCAAGCATTTTCAAAGATAGCATGTGCAGAAATGTCGTGGTCTGGACAGCTCTTTTAACGGGATATGGATCGAACTGTAAGCACGAAGATGCATTACAGGTTTTCAAGGGCATGATGAGAATGTGTGTACTTCCTAATCAATCTTCTCTTACTAGTGCTCTCAATTCATGTTGTGGATTAGAGGCTGTTGATAAAGGCAGGGAAGTTCATACTGTAGCCCACAAGCTAGGTTTGGAAAATGATATCTTTGTCAGTAATTCTCTTGTTGTCATGTATACTAAATGTGGACATATTAATGATGGGGTTGCTGTCTTCACAAGAATGTCTAGAAAGAATGTTGTGTCCTGGAATTCAATTATTGTTGGATGTGCCCAACATGGTTTTGGTATGTGCGCTTTAACTCTATTTGCTCAAATGATTCGTATGAGGGTGGATCCAGACGAAATCACGCTCGTGGGACTACTTTCTGCCTGTAGCCATTCTGGGATGTTAACAAAAGGTAGATGCTTTTTCAAACATTTTGGTAAAAACTTGTGTATTGAGATGACAAACGAGCATTATGCTTCTATGATCGACCTCTTAGGTCGATGCGGCCAATTGGAAGAAGCGGAAGCGTTAATTCATAACATGCCTGGTAAAGCAAACTACATGGTGTGGCTTGTATTGCTTAGCAGTTCCACCAACCATTCTAATGTGGATGTAGCTGAAAGAGCAGCAAAATGTGTGTTGGATCTACAACCAAACTGTAGTGCTGCTTATACATTACTCTCAAATTTATATGCTTCTACTGGCAAATGGACTGAAGTTTCCAAAATAAGGAAAAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGCTGGATTACAATTAAAGGGATCAAGCACAATTTCCTTTCGGGAGATCTGTCTCATCCGTTGAGCAGAAAGATACACCAAAAGTTGGAATGGCTAGGTGGAAAGTTGAAGGAACTGGGTTATGTGCCTGATCCTAAATTCTCCTTGCACGATGTCGAGACGGAGCAAAAGGAAGAGATGCTGTCTTATCATAGTGAGAGAATTGCTATTGGGTTTGGATTAATCAGTACAGTTGAGGGTAGCACAATAACAGTAATGAAAAACCTCCGCATCTGTGGTGATTGCCATAATGCCATCAAGCTAATATCGAGAGTTGTTGGTCGCAAAATCGTCGTAAGAGACACGAGCCGCTTTCATCACTTTCGTAGCGGAACCTGTTCTTGTGGAGATTACTGGTAG

Protein sequence

MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSWTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNVISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGLIFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDALQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMYTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLVGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPGKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDPKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISRVVGRKIVVRDTSRFHHFRSGTCSCGDYW
Homology
BLAST of Lsi01G001880 vs. ExPASy Swiss-Prot
Match: Q9FHF9 (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H49 PE=2 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 3.8e-223
Identity = 368/628 (58.60%), Postives = 467/628 (74.36%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSW 61
           MI GY    RL DAL LF EMPV+D++SWNSM+ GC++CGD++ A  +FD+M ER+VVSW
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW 131

Query: 62  TTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNVI 121
           T +++G    G+V+ A RLF++MP +D AAWNSMVHG+   G+V+DA++LF++MP +NVI
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191

Query: 122 SWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGLI 181
           SWT++I GLDQN RS EAL +F+ ML    K TS    C +TACAN  A  +G+Q+HGLI
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251

Query: 182 FKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDAL 241
            K G+ ++EYVSASL+TFYANCK I ++  +F + +   V VWTALL+GY  N KHEDAL
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311

Query: 242 QVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMY 301
            +F GM+R  +LPNQS+  S LNSC  L  +D G+E+H VA KLGLE D FV NSLVVMY
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371

Query: 302 TKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLV 361
           +  G++ND V+VF ++ +K++VSWNSIIVGCAQHG G  A  +F QMIR+  +PDEIT  
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431

Query: 362 GLLSACSHSGMLTKGRCFFKHFGKNL-CIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 421
           GLLSACSH G L KGR  F +    +  I+   +HY  M+D+LGRCG+L+EAE LI  M 
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491

Query: 422 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 481
            K N MVWL LLS+   HS+VD  E+AA  + +L    SAAY LLSN+YAS G+W+ VSK
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSK 551

Query: 482 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 541
           +R KMK  GI+K+PGSSW+ I+G KH F SGD  H    +I++KLE+L  KLKELGY PD
Sbjct: 552 LRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPD 611

Query: 542 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 601
            + +LHDVE EQKEEML YHSER+AI FGLI+TVEGS +TVMKNLR+C DCH  IKLIS 
Sbjct: 612 YRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISG 671

Query: 602 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IV+RD  RFHHF++GTCSCGDYW
Sbjct: 672 VVGREIVLRDPIRFHHFKNGTCSCGDYW 697

BLAST of Lsi01G001880 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 8.3e-138
Identity = 242/627 (38.60%), Postives = 379/627 (60.45%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSW 61
           M+ GYA+ G ++DA  +F  MP K+ +SWN++L   ++   +  AC +F       +VSW
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222

Query: 62  TTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNVI 121
             ++ G ++  ++  A + F  M  RDV +WN+++ G+  +G++++A +LF + P Q+V 
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282

Query: 122 SWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGLI 181
           +WT+++ G  QN    EA  +F KM      P  + ++        +      +++   +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQGE--RMEMAKEL 342

Query: 182 FKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDAL 241
           F    C +     +++T YA C  I  A ++F     R+ V W A++ GY  +    +AL
Sbjct: 343 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 402

Query: 242 QVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMY 301
           ++F  M R     N+SS +SAL++C  + A++ G+++H    K G E   FV N+L++MY
Sbjct: 403 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 462

Query: 302 TKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLV 361
            KCG I +   +F  M+ K++VSWN++I G ++HGFG  AL  F  M R  + PD+ T+V
Sbjct: 463 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 522

Query: 362 GLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPG 421
            +LSACSH+G++ KGR +F    ++  +   ++HYA M+DLLGR G LE+A  L+ NMP 
Sbjct: 523 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 582

Query: 422 KANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKI 481
           + +  +W  LL +S  H N ++AE AA  +  ++P  S  Y LLSNLYAS+G+W +V K+
Sbjct: 583 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 642

Query: 482 RKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDP 541
           R +M+D+G+ K PG SWI I+   H F  GD  HP   +I   LE L  ++K+ GYV   
Sbjct: 643 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 702

Query: 542 KFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISRV 601
              LHDVE E+KE M+ YHSER+A+ +G++    G  I V+KNLR+C DCHNAIK ++R+
Sbjct: 703 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 762

Query: 602 VGRKIVVRDTSRFHHFRSGTCSCGDYW 629
            GR I++RD +RFHHF+ G+CSCGDYW
Sbjct: 763 TGRLIILRDNNRFHHFKDGSCSCGDYW 781

BLAST of Lsi01G001880 vs. ExPASy Swiss-Prot
Match: Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 476.9 bits (1226), Expect = 3.6e-133
Identity = 247/629 (39.27%), Postives = 372/629 (59.14%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSM-ACNMFDKMSERNVVS 61
           +I      G ++ AL++F+ M  K+ I+WNS+L G  K     M A  +FD++ E +  S
Sbjct: 67  IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFS 126

Query: 62  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 121
           +  ++   +     E A   F  MP +D A+WN+M+ G+   G +E A ELF  M  +N 
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNE 186

Query: 122 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 181
           +SW ++I G  + G   +A        + FFK                        + G+
Sbjct: 187 VSWNAMISGYIECGDLEKA--------SHFFKV---------------------APVRGV 246

Query: 182 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKD-SMCRNVVVWTALLTGYGSNCKHED 241
           +  T          +++T Y   K +E A ++FKD ++ +N+V W A+++GY  N + ED
Sbjct: 247 VAWT----------AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 306

Query: 242 ALQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVV 301
            L++F+ M+   + PN S L+SAL  C  L A+  GR++H +  K  L ND+    SL+ 
Sbjct: 307 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 366

Query: 302 MYTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEIT 361
           MY KCG + D   +F  M +K+VV+WN++I G AQHG    AL LF +MI  ++ PD IT
Sbjct: 367 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 426

Query: 362 LVGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNM 421
            V +L AC+H+G++  G  +F+   ++  +E   +HY  M+DLLGR G+LEEA  LI +M
Sbjct: 427 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 486

Query: 422 PGKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVS 481
           P + +  V+  LL +   H NV++AE AA+ +L L    +A Y  L+N+YAS  +W +V+
Sbjct: 487 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 546

Query: 482 KIRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVP 541
           ++RK+MK+  ++K PG SWI I+   H+F S D  HP    IH+KL+ L  K+K  GY P
Sbjct: 547 RVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKP 606

Query: 542 DPKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLIS 601
           + +F+LH+VE EQKE++L +HSE++A+ FG I   +GS I V KNLRICGDCH AIK IS
Sbjct: 607 ELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFIS 656

Query: 602 RVVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
            +  R+I+VRDT+RFHHF+ G+CSCGDYW
Sbjct: 667 EIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

BLAST of Lsi01G001880 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.9e-130
Identity = 260/728 (35.71%), Postives = 388/728 (53.30%), Query Frame = 0

Query: 6   YAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSWTTII 65
           Y++ G    A KLF EMP++   SWN++L    K GD+   C  FD++ +R+ VSWTT+I
Sbjct: 59  YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118

Query: 66  DGLLEFGRVEVAVRLFWEM------PT--------------------------------- 125
            G    G+   A+R+  +M      PT                                 
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178

Query: 126 -------------------------------RDVAAWNSMVHGFFSNGRVEDAIELFQKM 185
                                          RD+++WN+M+      G+++ A+  F++M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 186 PSQNVISWTSVIGGLDQNGRSFEALVVFQKMLA-SFFKPTSSTLACALTACANICASFIG 245
             +++++W S+I G +Q G    AL +F KML  S   P   TLA  L+ACAN+    IG
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298

Query: 246 VQIHGLIFKTGYCFDEYVSASLVTFYANC-------KLIE-------------------- 305
            QIH  I  TG+     V  +L++ Y+ C       +LIE                    
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358

Query: 306 ------NASSIFKDSMCRNVVVWTALLTGYGSNCKHEDALQVFKGMMRMCVLPNQSSLTS 365
                  A +IF     R+VV WTA++ GY  +  + +A+ +F+ M+     PN  +L +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418

Query: 366 ALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMYTKCGHINDGVAVFTRM-SRK 425
            L+    L ++  G+++H  A K G    + VSN+L+ MY K G+I      F  +   +
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478

Query: 426 NVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLVGLLSACSHSGMLTKGRCFF 485
           + VSW S+I+  AQHG    AL LF  M+   + PD IT VG+ SAC+H+G++ +GR +F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538

Query: 486 KHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPGKANYMVWLVLLSSSTNHSN 545
                   I  T  HYA M+DL GR G L+EA+  I  MP + + + W  LLS+   H N
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598

Query: 546 VDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWIT 605
           +D+ + AA+ +L L+P  S AY+ L+NLY++ GKW E +KIRK MKD  + K+ G SWI 
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658

Query: 606 IKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDPKFSLHDVETEQKEEMLSYH 629
           +K   H F   D +HP   +I+  ++ +  ++K++GYVPD    LHD+E E KE++L +H
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718

BLAST of Lsi01G001880 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.7e-127
Identity = 248/687 (36.10%), Postives = 389/687 (56.62%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSE------ 61
           ++  Y+    L DA K+F EM V D++SWNS+++   K G   +A  MF +M+       
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227

Query: 62  ----------------------------------RNVVSWTTIIDGLLEFGRVEVAVRLF 121
                                             +N+     ++D   + G ++ A  +F
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287

Query: 122 WEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQ----NVISWTSVIGGLDQNGRSF 181
             M  +DV +WN+MV G+   GR EDA+ LF+KM  +    +V++W++ I G  Q G  +
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347

Query: 182 EALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL-------IFKTGYCFDE 241
           EAL V ++ML+S  KP   TL   L+ CA++ A   G +IH         + K G+  + 
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407

Query: 242 YVSASLVTFYANCKLIENASSIFKDSMC---RNVVVWTALLTGYGSNCKHEDALQVFKGM 301
            V   L+  YA CK ++ A ++F DS+    R+VV WT ++ GY  +     AL++   M
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMF-DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 467

Query: 302 MR--MCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLEN--DIFVSNSLVVMYTK 361
                   PN  +++ AL +C  L A+  G+++H  A +   +N   +FVSN L+ MY K
Sbjct: 468 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAK 527

Query: 362 CGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLVGL 421
           CG I+D   VF  M  KN V+W S++ G   HG+G  AL +F +M R+    D +TL+ +
Sbjct: 528 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 587

Query: 422 LSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPGKA 481
           L ACSHSGM+ +G  +F        +    EHYA ++DLLGR G+L  A  LI  MP + 
Sbjct: 588 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 647

Query: 482 NYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRK 541
             +VW+  LS    H  V++ E AA+ + +L  N   +YTLLSNLYA+ G+W +V++IR 
Sbjct: 648 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 707

Query: 542 KMKDEGILKQPGSSWITIKGIK--HNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDP 601
            M+ +G+ K+PG SW  ++GIK    F  GD +HP +++I+Q L     ++K++GYVP+ 
Sbjct: 708 LMRHKGVKKRPGCSW--VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 767

Query: 602 KFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISRV 629
            F+LHDV+ E+K+++L  HSE++A+ +G+++T +G+ I + KNLR+CGDCH A   +SR+
Sbjct: 768 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 827

BLAST of Lsi01G001880 vs. ExPASy TrEMBL
Match: A0A5D3CMS7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008650 PE=3 SV=1)

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 570/628 (90.76%), Postives = 596/628 (94.90%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAE GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS
Sbjct: 1   MMIEGYAENGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVE+A  LF  MPT+DVAAWNSMVHGFFSNGR+EDAIELF+KMP +NV
Sbjct: 61  WTTIINGLLEFGRVEIAECLFRVMPTKDVAAWNSMVHGFFSNGRIEDAIELFEKMPYRNV 120

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           I+WTSVIGGLD NGRSFEALVVFQKMLAS+FKP+SSTLACALTACANICA FIGVQIHGL
Sbjct: 121 ITWTSVIGGLDHNGRSFEALVVFQKMLASYFKPSSSTLACALTACANICAPFIGVQIHGL 180

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           IFKTGYCFDEYVSASL++FYANCKLIENASSIF D++ RNVVVWTALLTGYG NCKH DA
Sbjct: 181 IFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNVRRNVVVWTALLTGYGLNCKHTDA 240

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSS TSALNSCCGLEAVD+GREVH VAHKLGLENDIFVSNSLVVM
Sbjct: 241 LQVFKGMMRMSVLPNQSSFTSALNSCCGLEAVDRGREVHAVAHKLGLENDIFVSNSLVVM 300

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 301 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 360

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSACSHSGMLTKGRCFFKHFGKN CIEMT+EHY+SM+DLLGRCGQLEEAEALIH MP
Sbjct: 361 AGLLSACSHSGMLTKGRCFFKHFGKNFCIEMTSEHYSSMVDLLGRCGQLEEAEALIHIMP 420

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV  AERAAK VLDLQPNCSAAYTLLSNLYASTGKWTEV K
Sbjct: 421 GKANYMVWLALLSSSINHSNVHTAERAAKHVLDLQPNCSAAYTLLSNLYASTGKWTEVFK 480

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYV D
Sbjct: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVAD 540

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVE EQKEEMLSYHSER+AIGFGLISTV+GSTITVMKNLRICGDCHNA+KL S+
Sbjct: 541 PKFSLHDVEMEQKEEMLSYHSERLAIGFGLISTVDGSTITVMKNLRICGDCHNAVKLTSK 600

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRDTSRFHHFR+GTCSCGDYW
Sbjct: 601 VVGREIVVRDTSRFHHFRNGTCSCGDYW 628

BLAST of Lsi01G001880 vs. ExPASy TrEMBL
Match: A0A1S3AZY7 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484402 PE=3 SV=1)

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 570/628 (90.76%), Postives = 596/628 (94.90%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAE GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS
Sbjct: 86  MMIEGYAENGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 145

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVE+A  LF  MPT+DVAAWNSMVHGFFSNGR+EDAIELF+KMP +NV
Sbjct: 146 WTTIINGLLEFGRVEIAECLFRVMPTKDVAAWNSMVHGFFSNGRIEDAIELFEKMPYRNV 205

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           I+WTSVIGGLD NGRSFEALVVFQKMLAS+FKP+SSTLACALTACANICA FIGVQIHGL
Sbjct: 206 ITWTSVIGGLDHNGRSFEALVVFQKMLASYFKPSSSTLACALTACANICAPFIGVQIHGL 265

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           IFKTGYCFDEYVSASL++FYANCKLIENASSIF D++ RNVVVWTALLTGYG NCKH DA
Sbjct: 266 IFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNVRRNVVVWTALLTGYGLNCKHTDA 325

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSS TSALNSCCGLEAVD+GREVH VAHKLGLENDIFVSNSLVVM
Sbjct: 326 LQVFKGMMRMSVLPNQSSFTSALNSCCGLEAVDRGREVHAVAHKLGLENDIFVSNSLVVM 385

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 386 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 445

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSACSHSGMLTKGRCFFKHFGKN CIEMT+EHY+SM+DLLGRCGQLEEAEALIH MP
Sbjct: 446 AGLLSACSHSGMLTKGRCFFKHFGKNFCIEMTSEHYSSMVDLLGRCGQLEEAEALIHIMP 505

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV  AERAAK VLDLQPNCSAAYTLLSNLYASTGKWTEV K
Sbjct: 506 GKANYMVWLALLSSSINHSNVHTAERAAKHVLDLQPNCSAAYTLLSNLYASTGKWTEVFK 565

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYV D
Sbjct: 566 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVAD 625

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVE EQKEEMLSYHSER+AIGFGLISTV+GSTITVMKNLRICGDCHNA+KL S+
Sbjct: 626 PKFSLHDVEMEQKEEMLSYHSERLAIGFGLISTVDGSTITVMKNLRICGDCHNAVKLTSK 685

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRDTSRFHHFR+GTCSCGDYW
Sbjct: 686 VVGREIVVRDTSRFHHFRNGTCSCGDYW 713

BLAST of Lsi01G001880 vs. ExPASy TrEMBL
Match: A0A0A0KLU7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G521040 PE=3 SV=1)

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 564/628 (89.81%), Postives = 592/628 (94.27%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMIGGYA++GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDL+MACNMFDKMSERNVVS
Sbjct: 11  MMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS 70

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVEVA  LF  MPT+DV AWNSMVHGFFSNGRVEDAIELF+KMP++NV
Sbjct: 71  WTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNV 130

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTSVIGGLD NGRSFEALVVF KMLAS FK TSSTLACALTACANIC  FIGVQIHGL
Sbjct: 131 ISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGL 190

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTGYCF+EY+SASL++FYANCKLI+NASSIF D++ RNVVVWTALLTGYG NC+H DA
Sbjct: 191 IVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDA 250

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSSLTSALNSCCGLEAVD+GREVH VAHKLGLE+DIFVSNSLVVM
Sbjct: 251 LQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVM 310

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 311 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 370

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSAC HSGMLTKGRCFFKHFGKN  IEMTNEHY+SM+DLLGR GQLEEAEALIH MP
Sbjct: 371 AGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMP 430

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV VAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK
Sbjct: 431 GKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 490

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYVPD
Sbjct: 491 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPD 550

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFS HDVETEQKEEMLSYHSER+AIGFGLISTVEGSTI VMKNLRICGDCHNA+KL S+
Sbjct: 551 PKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSK 610

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRD SRFHHF +GTCSCGDYW
Sbjct: 611 VVGREIVVRDPSRFHHFHNGTCSCGDYW 637

BLAST of Lsi01G001880 vs. ExPASy TrEMBL
Match: A0A6J1CKH5 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012276 PE=3 SV=1)

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 553/628 (88.06%), Postives = 592/628 (94.27%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAEKGRL+DAL LF EMPVKDLISWNSMLKGCL CGDLSMA NMFDKM ERNVVS
Sbjct: 85  MMIAGYAEKGRLDDALILFDEMPVKDLISWNSMLKGCLNCGDLSMAWNMFDKMPERNVVS 144

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTIIDGLLEFGRVE+A RLFWEMPTRDVAAWNSM+HG+FSNGRVEDA ELF+KMP +NV
Sbjct: 145 WTTIIDGLLEFGRVEIAERLFWEMPTRDVAAWNSMIHGYFSNGRVEDAFELFEKMPLRNV 204

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTS+IGGL QNG+SFEAL++FQKML SF KPT STLAC LT CAN+CA F+GVQIHGL
Sbjct: 205 ISWTSMIGGLGQNGKSFEALLIFQKMLTSFVKPTPSTLACVLTVCANMCALFLGVQIHGL 264

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTGYCFDEY+SASL+TFYANCKLIENAS IF D++ RNVVVWTALLTGYG NCKHE+A
Sbjct: 265 IVKTGYCFDEYISASLITFYANCKLIENASDIFNDNLRRNVVVWTALLTGYGLNCKHENA 324

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMR+CV+PNQSSLTSALNSCCGLEAVD+GREVHTVAHKLGLENDIFVSNSLVVM
Sbjct: 325 LQVFKGMMRICVIPNQSSLTSALNSCCGLEAVDRGREVHTVAHKLGLENDIFVSNSLVVM 384

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCG+I DGVAVFTRMS KNVVSWNSIIVGCAQHGFGM ALTLFAQMIR RVD DEITL
Sbjct: 385 YTKCGYIYDGVAVFTRMSIKNVVSWNSIIVGCAQHGFGMWALTLFAQMIRARVDADEITL 444

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
           VGLLSACSHSGMLTKGRCFFKHFG+NLCIEMT+EHYASM+DLLGRCG+LEEAEALI NMP
Sbjct: 445 VGLLSACSHSGMLTKGRCFFKHFGENLCIEMTDEHYASMVDLLGRCGRLEEAEALILNMP 504

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
            KANYMVWL LLSSST H NVDVAERAAKC+LD QPNCSAAY LLSNLYASTGKW EVS+
Sbjct: 505 IKANYMVWLALLSSSTKHYNVDVAERAAKCLLDQQPNCSAAYILLSNLYASTGKWNEVSR 564

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           +RKKMKD+GILKQPGSSWITIKG++H+FLSGD SHPLSRKI+QKLEWLGGKLKELGYVPD
Sbjct: 565 VRKKMKDDGILKQPGSSWITIKGVRHDFLSGDRSHPLSRKIYQKLEWLGGKLKELGYVPD 624

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVETEQKEEMLSYHSER+AIGFGLISTVEGSTITVMKNLR+CGDCHNAIKLI++
Sbjct: 625 PKFSLHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHNAIKLIAK 684

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRD+SRFHHF SGTCSCGDYW
Sbjct: 685 VVGREIVVRDSSRFHHFHSGTCSCGDYW 712

BLAST of Lsi01G001880 vs. ExPASy TrEMBL
Match: A0A6J1EEY6 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433598 PE=3 SV=1)

HSP 1 Score: 1146.7 bits (2965), Expect = 0.0e+00
Identity = 548/628 (87.26%), Postives = 589/628 (93.79%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAE GRLEDALKLFYEMPVKDL+SWNSMLKGCLKCGDLSMA N+FDKM +RNV+S
Sbjct: 87  MMIAGYAENGRLEDALKLFYEMPVKDLVSWNSMLKGCLKCGDLSMAWNVFDKMPQRNVIS 146

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTIIDGLLEFGRVEVA R FWEMPTRDVAAWNSMVHG+FSNGRVEDA+ELF+KMP +NV
Sbjct: 147 WTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELFEKMPFRNV 206

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTSVIGGLDQNGRS+EAL+VFQKMLASF KPTSSTLACALTACANI   FIGVQIHGL
Sbjct: 207 ISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFFIGVQIHGL 266

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTG+CFDEY++ASL+TFYANCKLI+NA  IF D + RNV VWTALLTGYG NCKH+DA
Sbjct: 267 IVKTGHCFDEYIAASLITFYANCKLIQNAFDIFNDDLRRNVAVWTALLTGYGLNCKHDDA 326

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           L+VFKGMMRMCVLPNQSSLTSALNSCCGLEAVD+GREVH+VA+KLG+ENDIFV NSLV M
Sbjct: 327 LRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGREVHSVAYKLGVENDIFVGNSLVAM 386

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCG I DGVAVFTRMSRKNVVSWNSIIVGCAQHGFGM ALTLFAQMIR RVD DEITL
Sbjct: 387 YTKCGQIRDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMWALTLFAQMIRSRVDQDEITL 446

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
           +GLLSACSHSG+LTKGR FFKHFGKNLCIEMTNEHYASM+DLLGR G+L+EAEALIH MP
Sbjct: 447 IGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYASMVDLLGRHGELDEAEALIHTMP 506

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
            KANY VWL LLSS + HSNVDVAERAAKCVL+LQP+CSAAYTLLSNLYAS+GKWTEVSK
Sbjct: 507 IKANYTVWLALLSSCSKHSNVDVAERAAKCVLELQPSCSAAYTLLSNLYASSGKWTEVSK 566

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWIT+KGI+H+FLSGD SHP SRKI+QKLEWL GKLKELGYVPD
Sbjct: 567 IRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPSSRKIYQKLEWLRGKLKELGYVPD 626

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVE+EQKEEMLS HSER+AIGFGLISTVEGSTITVMKNLRICGDCHNAIKLI++
Sbjct: 627 PKFSLHDVESEQKEEMLSTHSERLAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLIAK 686

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRD+SRFHHFRSG CSCGDYW
Sbjct: 687 VVGREIVVRDSSRFHHFRSGACSCGDYW 714

BLAST of Lsi01G001880 vs. NCBI nr
Match: XP_038881432.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial [Benincasa hispida])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 587/628 (93.47%), Postives = 609/628 (96.97%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMIGGYAEKGRL+DALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMF+KMSERNVVS
Sbjct: 85  MMIGGYAEKGRLDDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFEKMSERNVVS 144

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTIIDGLLEFGRVEVA RLFWEMPT+DVAAWNSMVHGFFSNGR+EDAIELF+KMPS+NV
Sbjct: 145 WTTIIDGLLEFGRVEVAERLFWEMPTKDVAAWNSMVHGFFSNGRIEDAIELFEKMPSRNV 204

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTSVIGGLDQNGRSFEALV FQKMLASFFKPTSSTLACALTACANICASF+GV+IHGL
Sbjct: 205 ISWTSVIGGLDQNGRSFEALVFFQKMLASFFKPTSSTLACALTACANICASFMGVKIHGL 264

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTGYCFDEYVSASL+TFYANCKLIENASSIF D+  RNVVVWTAL+TGYG N KHEDA
Sbjct: 265 IVKTGYCFDEYVSASLITFYANCKLIENASSIFNDNTHRNVVVWTALVTGYGLNGKHEDA 324

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVD+GREVHTVAHKLGLENDIFVSNSL+VM
Sbjct: 325 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGREVHTVAHKLGLENDIFVSNSLIVM 384

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFT+MSRKNVVSWNSIIVGCAQHGFGM ALTLF QMIRMRVDPDEITL
Sbjct: 385 YTKCGHINDGIAVFTKMSRKNVVSWNSIIVGCAQHGFGMWALTLFTQMIRMRVDPDEITL 444

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
           VGLLSACSHSGML KGRCFFKHFGKNL IEMTNEHY SM+DLLGRCGQLEEAEALIHNMP
Sbjct: 445 VGLLSACSHSGMLKKGRCFFKHFGKNLRIEMTNEHYVSMVDLLGRCGQLEEAEALIHNMP 504

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
            KANYMVWL LLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK
Sbjct: 505 SKANYMVWLALLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 564

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKH+F+SGD SHPL RKI+QKLEWL GKLKELGYVPD
Sbjct: 565 IRKKMKDEGILKQPGSSWITIKGIKHDFVSGDRSHPLRRKIYQKLEWLRGKLKELGYVPD 624

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVETEQKEEMLSYHSER+AIGFGLISTVEGSTITVMKNLRICGDCHNAIKLIS+
Sbjct: 625 PKFSLHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISK 684

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRDTSRFHHFRSG CSCGDYW
Sbjct: 685 VVGREIVVRDTSRFHHFRSGMCSCGDYW 712

BLAST of Lsi01G001880 vs. NCBI nr
Match: KAA0052578.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13247.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 570/628 (90.76%), Postives = 596/628 (94.90%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAE GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS
Sbjct: 1   MMIEGYAENGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVE+A  LF  MPT+DVAAWNSMVHGFFSNGR+EDAIELF+KMP +NV
Sbjct: 61  WTTIINGLLEFGRVEIAECLFRVMPTKDVAAWNSMVHGFFSNGRIEDAIELFEKMPYRNV 120

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           I+WTSVIGGLD NGRSFEALVVFQKMLAS+FKP+SSTLACALTACANICA FIGVQIHGL
Sbjct: 121 ITWTSVIGGLDHNGRSFEALVVFQKMLASYFKPSSSTLACALTACANICAPFIGVQIHGL 180

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           IFKTGYCFDEYVSASL++FYANCKLIENASSIF D++ RNVVVWTALLTGYG NCKH DA
Sbjct: 181 IFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNVRRNVVVWTALLTGYGLNCKHTDA 240

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSS TSALNSCCGLEAVD+GREVH VAHKLGLENDIFVSNSLVVM
Sbjct: 241 LQVFKGMMRMSVLPNQSSFTSALNSCCGLEAVDRGREVHAVAHKLGLENDIFVSNSLVVM 300

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 301 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 360

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSACSHSGMLTKGRCFFKHFGKN CIEMT+EHY+SM+DLLGRCGQLEEAEALIH MP
Sbjct: 361 AGLLSACSHSGMLTKGRCFFKHFGKNFCIEMTSEHYSSMVDLLGRCGQLEEAEALIHIMP 420

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV  AERAAK VLDLQPNCSAAYTLLSNLYASTGKWTEV K
Sbjct: 421 GKANYMVWLALLSSSINHSNVHTAERAAKHVLDLQPNCSAAYTLLSNLYASTGKWTEVFK 480

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYV D
Sbjct: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVAD 540

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVE EQKEEMLSYHSER+AIGFGLISTV+GSTITVMKNLRICGDCHNA+KL S+
Sbjct: 541 PKFSLHDVEMEQKEEMLSYHSERLAIGFGLISTVDGSTITVMKNLRICGDCHNAVKLTSK 600

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRDTSRFHHFR+GTCSCGDYW
Sbjct: 601 VVGREIVVRDTSRFHHFRNGTCSCGDYW 628

BLAST of Lsi01G001880 vs. NCBI nr
Match: XP_008439681.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46460, mitochondrial [Cucumis melo])

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 570/628 (90.76%), Postives = 596/628 (94.90%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMI GYAE GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS
Sbjct: 86  MMIEGYAENGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 145

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVE+A  LF  MPT+DVAAWNSMVHGFFSNGR+EDAIELF+KMP +NV
Sbjct: 146 WTTIINGLLEFGRVEIAECLFRVMPTKDVAAWNSMVHGFFSNGRIEDAIELFEKMPYRNV 205

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           I+WTSVIGGLD NGRSFEALVVFQKMLAS+FKP+SSTLACALTACANICA FIGVQIHGL
Sbjct: 206 ITWTSVIGGLDHNGRSFEALVVFQKMLASYFKPSSSTLACALTACANICAPFIGVQIHGL 265

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           IFKTGYCFDEYVSASL++FYANCKLIENASSIF D++ RNVVVWTALLTGYG NCKH DA
Sbjct: 266 IFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNVRRNVVVWTALLTGYGLNCKHTDA 325

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSS TSALNSCCGLEAVD+GREVH VAHKLGLENDIFVSNSLVVM
Sbjct: 326 LQVFKGMMRMSVLPNQSSFTSALNSCCGLEAVDRGREVHAVAHKLGLENDIFVSNSLVVM 385

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 386 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 445

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSACSHSGMLTKGRCFFKHFGKN CIEMT+EHY+SM+DLLGRCGQLEEAEALIH MP
Sbjct: 446 AGLLSACSHSGMLTKGRCFFKHFGKNFCIEMTSEHYSSMVDLLGRCGQLEEAEALIHIMP 505

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV  AERAAK VLDLQPNCSAAYTLLSNLYASTGKWTEV K
Sbjct: 506 GKANYMVWLALLSSSINHSNVHTAERAAKHVLDLQPNCSAAYTLLSNLYASTGKWTEVFK 565

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYV D
Sbjct: 566 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVAD 625

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFSLHDVE EQKEEMLSYHSER+AIGFGLISTV+GSTITVMKNLRICGDCHNA+KL S+
Sbjct: 626 PKFSLHDVEMEQKEEMLSYHSERLAIGFGLISTVDGSTITVMKNLRICGDCHNAVKLTSK 685

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRDTSRFHHFR+GTCSCGDYW
Sbjct: 686 VVGREIVVRDTSRFHHFRNGTCSCGDYW 713

BLAST of Lsi01G001880 vs. NCBI nr
Match: XP_011658273.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 [Cucumis sativus] >XP_031743942.1 pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 564/628 (89.81%), Postives = 592/628 (94.27%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMIGGYA++GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDL+MACNMFDKMSERNVVS
Sbjct: 86  MMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS 145

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVEVA  LF  MPT+DV AWNSMVHGFFSNGRVEDAIELF+KMP++NV
Sbjct: 146 WTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNV 205

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTSVIGGLD NGRSFEALVVF KMLAS FK TSSTLACALTACANIC  FIGVQIHGL
Sbjct: 206 ISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGL 265

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTGYCF+EY+SASL++FYANCKLI+NASSIF D++ RNVVVWTALLTGYG NC+H DA
Sbjct: 266 IVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDA 325

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSSLTSALNSCCGLEAVD+GREVH VAHKLGLE+DIFVSNSLVVM
Sbjct: 326 LQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVM 385

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 386 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 445

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSAC HSGMLTKGRCFFKHFGKN  IEMTNEHY+SM+DLLGR GQLEEAEALIH MP
Sbjct: 446 AGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMP 505

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV VAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK
Sbjct: 506 GKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 565

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYVPD
Sbjct: 566 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPD 625

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFS HDVETEQKEEMLSYHSER+AIGFGLISTVEGSTI VMKNLRICGDCHNA+KL S+
Sbjct: 626 PKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSK 685

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRD SRFHHF +GTCSCGDYW
Sbjct: 686 VVGREIVVRDPSRFHHFHNGTCSCGDYW 712

BLAST of Lsi01G001880 vs. NCBI nr
Match: XP_031743943.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 1166.8 bits (3017), Expect = 0.0e+00
Identity = 564/628 (89.81%), Postives = 592/628 (94.27%), Query Frame = 0

Query: 1   MMIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVS 60
           MMIGGYA++GRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDL+MACNMFDKMSERNVVS
Sbjct: 11  MMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS 70

Query: 61  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 120
           WTTII+GLLEFGRVEVA  LF  MPT+DV AWNSMVHGFFSNGRVEDAIELF+KMP++NV
Sbjct: 71  WTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNV 130

Query: 121 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 180
           ISWTSVIGGLD NGRSFEALVVF KMLAS FK TSSTLACALTACANIC  FIGVQIHGL
Sbjct: 131 ISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGL 190

Query: 181 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDA 240
           I KTGYCF+EY+SASL++FYANCKLI+NASSIF D++ RNVVVWTALLTGYG NC+H DA
Sbjct: 191 IVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDA 250

Query: 241 LQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVM 300
           LQVFKGMMRM VLPNQSSLTSALNSCCGLEAVD+GREVH VAHKLGLE+DIFVSNSLVVM
Sbjct: 251 LQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVM 310

Query: 301 YTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITL 360
           YTKCGHINDG+AVFTRMSRKNVVSWNSIIVGCAQHGFG  ALTLFAQMIR RVDPDEITL
Sbjct: 311 YTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITL 370

Query: 361 VGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 420
            GLLSAC HSGMLTKGRCFFKHFGKN  IEMTNEHY+SM+DLLGR GQLEEAEALIH MP
Sbjct: 371 AGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMP 430

Query: 421 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 480
           GKANYMVWL LLSSS NHSNV VAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK
Sbjct: 431 GKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 490

Query: 481 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 540
           IRKKMKDEGILKQPGSSWITIKGIKHNF+SGD SHPLSRKI+QKLEWLGGKLKELGYVPD
Sbjct: 491 IRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPD 550

Query: 541 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 600
           PKFS HDVETEQKEEMLSYHSER+AIGFGLISTVEGSTI VMKNLRICGDCHNA+KL S+
Sbjct: 551 PKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSK 610

Query: 601 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IVVRD SRFHHF +GTCSCGDYW
Sbjct: 611 VVGREIVVRDPSRFHHFHNGTCSCGDYW 637

BLAST of Lsi01G001880 vs. TAIR 10
Match: AT5G46460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 775.8 bits (2002), Expect = 2.7e-224
Identity = 368/628 (58.60%), Postives = 467/628 (74.36%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSW 61
           MI GY    RL DAL LF EMPV+D++SWNSM+ GC++CGD++ A  +FD+M ER+VVSW
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW 131

Query: 62  TTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNVI 121
           T +++G    G+V+ A RLF++MP +D AAWNSMVHG+   G+V+DA++LF++MP +NVI
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191

Query: 122 SWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGLI 181
           SWT++I GLDQN RS EAL +F+ ML    K TS    C +TACAN  A  +G+Q+HGLI
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251

Query: 182 FKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDAL 241
            K G+ ++EYVSASL+TFYANCK I ++  +F + +   V VWTALL+GY  N KHEDAL
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311

Query: 242 QVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMY 301
            +F GM+R  +LPNQS+  S LNSC  L  +D G+E+H VA KLGLE D FV NSLVVMY
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371

Query: 302 TKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLV 361
           +  G++ND V+VF ++ +K++VSWNSIIVGCAQHG G  A  +F QMIR+  +PDEIT  
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431

Query: 362 GLLSACSHSGMLTKGRCFFKHFGKNL-CIEMTNEHYASMIDLLGRCGQLEEAEALIHNMP 421
           GLLSACSH G L KGR  F +    +  I+   +HY  M+D+LGRCG+L+EAE LI  M 
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491

Query: 422 GKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSK 481
            K N MVWL LLS+   HS+VD  E+AA  + +L    SAAY LLSN+YAS G+W+ VSK
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSK 551

Query: 482 IRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPD 541
           +R KMK  GI+K+PGSSW+ I+G KH F SGD  H    +I++KLE+L  KLKELGY PD
Sbjct: 552 LRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPD 611

Query: 542 PKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISR 601
            + +LHDVE EQKEEML YHSER+AI FGLI+TVEGS +TVMKNLR+C DCH  IKLIS 
Sbjct: 612 YRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISG 671

Query: 602 VVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
           VVGR+IV+RD  RFHHF++GTCSCGDYW
Sbjct: 672 VVGREIVLRDPIRFHHFKNGTCSCGDYW 697

BLAST of Lsi01G001880 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 492.3 bits (1266), Expect = 5.9e-139
Identity = 242/627 (38.60%), Postives = 379/627 (60.45%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSW 61
           M+ GYA+ G ++DA  +F  MP K+ +SWN++L   ++   +  AC +F       +VSW
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222

Query: 62  TTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNVI 121
             ++ G ++  ++  A + F  M  RDV +WN+++ G+  +G++++A +LF + P Q+V 
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282

Query: 122 SWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGLI 181
           +WT+++ G  QN    EA  +F KM      P  + ++        +      +++   +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQGE--RMEMAKEL 342

Query: 182 FKTGYCFDEYVSASLVTFYANCKLIENASSIFKDSMCRNVVVWTALLTGYGSNCKHEDAL 241
           F    C +     +++T YA C  I  A ++F     R+ V W A++ GY  +    +AL
Sbjct: 343 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 402

Query: 242 QVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMY 301
           ++F  M R     N+SS +SAL++C  + A++ G+++H    K G E   FV N+L++MY
Sbjct: 403 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 462

Query: 302 TKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLV 361
            KCG I +   +F  M+ K++VSWN++I G ++HGFG  AL  F  M R  + PD+ T+V
Sbjct: 463 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 522

Query: 362 GLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPG 421
            +LSACSH+G++ KGR +F    ++  +   ++HYA M+DLLGR G LE+A  L+ NMP 
Sbjct: 523 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 582

Query: 422 KANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKI 481
           + +  +W  LL +S  H N ++AE AA  +  ++P  S  Y LLSNLYAS+G+W +V K+
Sbjct: 583 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 642

Query: 482 RKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDP 541
           R +M+D+G+ K PG SWI I+   H F  GD  HP   +I   LE L  ++K+ GYV   
Sbjct: 643 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 702

Query: 542 KFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISRV 601
              LHDVE E+KE M+ YHSER+A+ +G++    G  I V+KNLR+C DCHNAIK ++R+
Sbjct: 703 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 762

Query: 602 VGRKIVVRDTSRFHHFRSGTCSCGDYW 629
            GR I++RD +RFHHF+ G+CSCGDYW
Sbjct: 763 TGRLIILRDNNRFHHFKDGSCSCGDYW 781

BLAST of Lsi01G001880 vs. TAIR 10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 476.9 bits (1226), Expect = 2.6e-134
Identity = 247/629 (39.27%), Postives = 372/629 (59.14%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSM-ACNMFDKMSERNVVS 61
           +I      G ++ AL++F+ M  K+ I+WNS+L G  K     M A  +FD++ E +  S
Sbjct: 67  IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFS 126

Query: 62  WTTIIDGLLEFGRVEVAVRLFWEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQNV 121
           +  ++   +     E A   F  MP +D A+WN+M+ G+   G +E A ELF  M  +N 
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNE 186

Query: 122 ISWTSVIGGLDQNGRSFEALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL 181
           +SW ++I G  + G   +A        + FFK                        + G+
Sbjct: 187 VSWNAMISGYIECGDLEKA--------SHFFKV---------------------APVRGV 246

Query: 182 IFKTGYCFDEYVSASLVTFYANCKLIENASSIFKD-SMCRNVVVWTALLTGYGSNCKHED 241
           +  T          +++T Y   K +E A ++FKD ++ +N+V W A+++GY  N + ED
Sbjct: 247 VAWT----------AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 306

Query: 242 ALQVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVV 301
            L++F+ M+   + PN S L+SAL  C  L A+  GR++H +  K  L ND+    SL+ 
Sbjct: 307 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 366

Query: 302 MYTKCGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEIT 361
           MY KCG + D   +F  M +K+VV+WN++I G AQHG    AL LF +MI  ++ PD IT
Sbjct: 367 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 426

Query: 362 LVGLLSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNM 421
            V +L AC+H+G++  G  +F+   ++  +E   +HY  M+DLLGR G+LEEA  LI +M
Sbjct: 427 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 486

Query: 422 PGKANYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVS 481
           P + +  V+  LL +   H NV++AE AA+ +L L    +A Y  L+N+YAS  +W +V+
Sbjct: 487 PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVA 546

Query: 482 KIRKKMKDEGILKQPGSSWITIKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVP 541
           ++RK+MK+  ++K PG SWI I+   H+F S D  HP    IH+KL+ L  K+K  GY P
Sbjct: 547 RVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKP 606

Query: 542 DPKFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLIS 601
           + +F+LH+VE EQKE++L +HSE++A+ FG I   +GS I V KNLRICGDCH AIK IS
Sbjct: 607 ELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFIS 656

Query: 602 RVVGRKIVVRDTSRFHHFRSGTCSCGDYW 629
            +  R+I+VRDT+RFHHF+ G+CSCGDYW
Sbjct: 667 EIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

BLAST of Lsi01G001880 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 467.2 bits (1201), Expect = 2.0e-131
Identity = 260/728 (35.71%), Postives = 388/728 (53.30%), Query Frame = 0

Query: 6   YAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSERNVVSWTTII 65
           Y++ G    A KLF EMP++   SWN++L    K GD+   C  FD++ +R+ VSWTT+I
Sbjct: 59  YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118

Query: 66  DGLLEFGRVEVAVRLFWEM------PT--------------------------------- 125
            G    G+   A+R+  +M      PT                                 
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178

Query: 126 -------------------------------RDVAAWNSMVHGFFSNGRVEDAIELFQKM 185
                                          RD+++WN+M+      G+++ A+  F++M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 186 PSQNVISWTSVIGGLDQNGRSFEALVVFQKMLA-SFFKPTSSTLACALTACANICASFIG 245
             +++++W S+I G +Q G    AL +F KML  S   P   TLA  L+ACAN+    IG
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298

Query: 246 VQIHGLIFKTGYCFDEYVSASLVTFYANC-------KLIE-------------------- 305
            QIH  I  TG+     V  +L++ Y+ C       +LIE                    
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358

Query: 306 ------NASSIFKDSMCRNVVVWTALLTGYGSNCKHEDALQVFKGMMRMCVLPNQSSLTS 365
                  A +IF     R+VV WTA++ GY  +  + +A+ +F+ M+     PN  +L +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418

Query: 366 ALNSCCGLEAVDKGREVHTVAHKLGLENDIFVSNSLVVMYTKCGHINDGVAVFTRM-SRK 425
            L+    L ++  G+++H  A K G    + VSN+L+ MY K G+I      F  +   +
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478

Query: 426 NVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLVGLLSACSHSGMLTKGRCFF 485
           + VSW S+I+  AQHG    AL LF  M+   + PD IT VG+ SAC+H+G++ +GR +F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538

Query: 486 KHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPGKANYMVWLVLLSSSTNHSN 545
                   I  T  HYA M+DL GR G L+EA+  I  MP + + + W  LLS+   H N
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598

Query: 546 VDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWIT 605
           +D+ + AA+ +L L+P  S AY+ L+NLY++ GKW E +KIRK MKD  + K+ G SWI 
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658

Query: 606 IKGIKHNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDPKFSLHDVETEQKEEMLSYH 629
           +K   H F   D +HP   +I+  ++ +  ++K++GYVPD    LHD+E E KE++L +H
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718

BLAST of Lsi01G001880 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 458.0 bits (1177), Expect = 1.2e-128
Identity = 248/687 (36.10%), Postives = 389/687 (56.62%), Query Frame = 0

Query: 2   MIGGYAEKGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLSMACNMFDKMSE------ 61
           ++  Y+    L DA K+F EM V D++SWNS+++   K G   +A  MF +M+       
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227

Query: 62  ----------------------------------RNVVSWTTIIDGLLEFGRVEVAVRLF 121
                                             +N+     ++D   + G ++ A  +F
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287

Query: 122 WEMPTRDVAAWNSMVHGFFSNGRVEDAIELFQKMPSQ----NVISWTSVIGGLDQNGRSF 181
             M  +DV +WN+MV G+   GR EDA+ LF+KM  +    +V++W++ I G  Q G  +
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347

Query: 182 EALVVFQKMLASFFKPTSSTLACALTACANICASFIGVQIHGL-------IFKTGYCFDE 241
           EAL V ++ML+S  KP   TL   L+ CA++ A   G +IH         + K G+  + 
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407

Query: 242 YVSASLVTFYANCKLIENASSIFKDSMC---RNVVVWTALLTGYGSNCKHEDALQVFKGM 301
            V   L+  YA CK ++ A ++F DS+    R+VV WT ++ GY  +     AL++   M
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMF-DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 467

Query: 302 MR--MCVLPNQSSLTSALNSCCGLEAVDKGREVHTVAHKLGLEN--DIFVSNSLVVMYTK 361
                   PN  +++ AL +C  L A+  G+++H  A +   +N   +FVSN L+ MY K
Sbjct: 468 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAK 527

Query: 362 CGHINDGVAVFTRMSRKNVVSWNSIIVGCAQHGFGMCALTLFAQMIRMRVDPDEITLVGL 421
           CG I+D   VF  M  KN V+W S++ G   HG+G  AL +F +M R+    D +TL+ +
Sbjct: 528 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 587

Query: 422 LSACSHSGMLTKGRCFFKHFGKNLCIEMTNEHYASMIDLLGRCGQLEEAEALIHNMPGKA 481
           L ACSHSGM+ +G  +F        +    EHYA ++DLLGR G+L  A  LI  MP + 
Sbjct: 588 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 647

Query: 482 NYMVWLVLLSSSTNHSNVDVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRK 541
             +VW+  LS    H  V++ E AA+ + +L  N   +YTLLSNLYA+ G+W +V++IR 
Sbjct: 648 PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRS 707

Query: 542 KMKDEGILKQPGSSWITIKGIK--HNFLSGDLSHPLSRKIHQKLEWLGGKLKELGYVPDP 601
            M+ +G+ K+PG SW  ++GIK    F  GD +HP +++I+Q L     ++K++GYVP+ 
Sbjct: 708 LMRHKGVKKRPGCSW--VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 767

Query: 602 KFSLHDVETEQKEEMLSYHSERIAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLISRV 629
            F+LHDV+ E+K+++L  HSE++A+ +G+++T +G+ I + KNLR+CGDCH A   +SR+
Sbjct: 768 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 827

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FHF93.8e-22358.60Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop... [more]
Q9SY028.3e-13838.60Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q9M4P33.6e-13339.27Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop... [more]
Q9SHZ82.9e-13035.71Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q9LFL51.7e-12736.10Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3CMS70.0e+0090.76Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AZY70.0e+0090.76pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucumis ... [more]
A0A0A0KLU70.0e+0089.81DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5210... [more]
A0A6J1CKH50.0e+0088.06pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Momordic... [more]
A0A6J1EEY60.0e+0087.26pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
XP_038881432.10.0e+0093.47pentatricopeptide repeat-containing protein At5g46460, mitochondrial [Benincasa ... [more]
KAA0052578.10.0e+0090.76pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13247... [more]
XP_008439681.10.0e+0090.76PREDICTED: pentatricopeptide repeat-containing protein At5g46460, mitochondrial ... [more]
XP_011658273.10.0e+0089.81pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 ... [more]
XP_031743943.10.0e+0089.81pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 ... [more]
Match NameE-valueIdentityDescription
AT5G46460.12.7e-22458.60Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G02750.15.9e-13938.60Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G16835.12.6e-13439.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22070.12.0e-13135.71pentatricopeptide (PPR) repeat-containing protein [more]
AT5G16860.11.2e-12836.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 219..267
e-value: 4.6E-8
score: 33.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 461..490
e-value: 0.019
score: 15.2
coord: 2..25
e-value: 1.2E-4
score: 22.1
coord: 59..88
e-value: 2.5E-4
score: 21.1
coord: 121..147
e-value: 0.033
score: 14.4
coord: 323..352
e-value: 3.1E-4
score: 20.8
coord: 295..322
e-value: 0.46
score: 10.8
coord: 91..119
e-value: 3.5E-7
score: 30.0
coord: 396..420
e-value: 0.0027
score: 17.8
coord: 28..58
e-value: 8.8E-7
score: 28.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 28..59
e-value: 1.5E-6
score: 26.0
coord: 323..357
e-value: 2.8E-4
score: 18.8
coord: 91..120
e-value: 4.3E-7
score: 27.7
coord: 1..24
e-value: 3.7E-4
score: 18.5
coord: 222..255
e-value: 7.9E-7
score: 26.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 88..122
score: 11.805378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 26..60
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 10.292718
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 494..618
e-value: 4.5E-39
score: 133.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 339..520
e-value: 3.0E-22
score: 81.4
coord: 88..169
e-value: 2.4E-17
score: 65.3
coord: 170..285
e-value: 2.1E-15
score: 58.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..87
e-value: 1.3E-22
score: 82.0
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 39..255
NoneNo IPR availablePANTHERPTHR47924:SF1SUBFAMILY NOT NAMEDcoord: 39..255
coord: 219..622
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 219..622

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G001880.1Lsi01G001880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding