Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGTTACAGAGAGAGAAGAGAAAGGTAATTCATCGAACACGAAACTTGTAGAAATCAAGAAGGAAGAAGTAGAAGAAGAAGATTTCGACCTTTGGTTGAACGAAGTGTTGAAGGATTTCGATTCGTTTACTTCATCAATCGATAAAGCTCTGATTAGTGAAGAGGAGGAAGATGCCGAAGAATCGGCGAGGTCAACGAAACGAACAAGAACCAAAGAATCAGACAAAGCAGAATCAATGATAAATAAGGCGGCGAATATGGAGGAAGATGAAACTGAATGGGGAATGGATCCTCTGGACATAACCAAGGAAATAGTATTGAAATACCACGACTTCATTGACGAAATTTATCAAATGTTGAAAGATGAACCGAAAGATGAACGGAAAGAAGTAAAAATCCAATGGCAGAAATGGTGTGGGATTATTGACAGAGCAAATGTCCTGGTTAAGTCTCTGAATCGAAGTCTGAAAACACTGGCTTTCGAAATGGCATGGATGAAATCCATGGATGAATTTAAGAAGGAATATTCTCTCAGAGAAACCCATGTTCCTGATCTAATAGCTTTACTTCGAGACATAAATACACGTATAGAATCTTCCCCTCATTTCAGCCTTGTTTCAGACATAAACATGAGGGGAGAAGTGTTAACACTGTGTTTAGATGAGCTTGAGAGATCCAAGGAAGATTTGACTGAAATGGTTGAAGTAATCGAAGAACTCAAGGAATTAGATTTAGAAGATGAAGAAGATGGAGAATTAGATTTAGATTTAGAATTAGAAGCTGATGAGTTTCAGGAATTAGATTTACCAGATGCTGAAGAAACAGAGTAA
mRNA sequence
ATGACAGTTACAGAGAGAGAAGAGAAAGGTAATTCATCGAACACGAAACTTGTAGAAATCAAGAAGGAAGAAGTAGAAGAAGAAGATTTCGACCTTTGGTTGAACGAAGTGTTGAAGGATTTCGATTCGTTTACTTCATCAATCGATAAAGCTCTGATTAGTGAAGAGGAGGAAGATGCCGAAGAATCGGCGAGGTCAACGAAACGAACAAGAACCAAAGAATCAGACAAAGCAGAATCAATGATAAATAAGGCGGCGAATATGGAGGAAGATGAAACTGAATGGGGAATGGATCCTCTGGACATAACCAAGGAAATAGTATTGAAATACCACGACTTCATTGACGAAATTTATCAAATGTTGAAAGATGAACCGAAAGATGAACGGAAAGAAGTAAAAATCCAATGGCAGAAATGGTGTGGGATTATTGACAGAGCAAATGTCCTGGTTAAGTCTCTGAATCGAAGTCTGAAAACACTGGCTTTCGAAATGGCATGGATGAAATCCATGGATGAATTTAAGAAGGAATATTCTCTCAGAGAAACCCATGTTCCTGATCTAATAGCTTTACTTCGAGACATAAATACACGTATAGAATCTTCCCCTCATTTCAGCCTTGTTTCAGACATAAACATGAGGGGAGAAGTGTTAACACTGTGTTTAGATGAGCTTGAGAGATCCAAGGAAGATTTGACTGAAATGGTTGAAGTAATCGAAGAACTCAAGGAATTAGATTTAGAAGATGAAGAAGATGGAGAATTAGATTTAGATTTAGAATTAGAAGCTGATGAGTTTCAGGAATTAGATTTACCAGATGCTGAAGAAACAGAGTAA
Coding sequence (CDS)
ATGACAGTTACAGAGAGAGAAGAGAAAGGTAATTCATCGAACACGAAACTTGTAGAAATCAAGAAGGAAGAAGTAGAAGAAGAAGATTTCGACCTTTGGTTGAACGAAGTGTTGAAGGATTTCGATTCGTTTACTTCATCAATCGATAAAGCTCTGATTAGTGAAGAGGAGGAAGATGCCGAAGAATCGGCGAGGTCAACGAAACGAACAAGAACCAAAGAATCAGACAAAGCAGAATCAATGATAAATAAGGCGGCGAATATGGAGGAAGATGAAACTGAATGGGGAATGGATCCTCTGGACATAACCAAGGAAATAGTATTGAAATACCACGACTTCATTGACGAAATTTATCAAATGTTGAAAGATGAACCGAAAGATGAACGGAAAGAAGTAAAAATCCAATGGCAGAAATGGTGTGGGATTATTGACAGAGCAAATGTCCTGGTTAAGTCTCTGAATCGAAGTCTGAAAACACTGGCTTTCGAAATGGCATGGATGAAATCCATGGATGAATTTAAGAAGGAATATTCTCTCAGAGAAACCCATGTTCCTGATCTAATAGCTTTACTTCGAGACATAAATACACGTATAGAATCTTCCCCTCATTTCAGCCTTGTTTCAGACATAAACATGAGGGGAGAAGTGTTAACACTGTGTTTAGATGAGCTTGAGAGATCCAAGGAAGATTTGACTGAAATGGTTGAAGTAATCGAAGAACTCAAGGAATTAGATTTAGAAGATGAAGAAGATGGAGAATTAGATTTAGATTTAGAATTAGAAGCTGATGAGTTTCAGGAATTAGATTTACCAGATGCTGAAGAAACAGAGTAA
Protein sequence
MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDAEESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPLDITKEIVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE
Homology
BLAST of Lsi01G001870 vs. ExPASy TrEMBL
Match:
A0A5A7UDN3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008660 PE=4 SV=1)
HSP 1 Score: 284.6 bits (727), Expect = 4.3e-73
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISE 60
MTVTEREE+GNSSNT +VEIKKE V E++ D LN LKD S D+ I
Sbjct: 1 MTVTEREEEGNSSNTNIVEIKKEPVEFDQEEQDGIDALLNLALKD---GCFSDDQLQIDN 60
Query: 61 EEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETEWGMDPLDITKEIVLKYHDFI 120
EEED EES RSTKRTRT ESD+AES+ I N+E ++ E GMDPL++ +EIVLKYHDFI
Sbjct: 61 EEEDTEESERSTKRTRTAESDEAESLAIKNTGNLEANQPELGMDPLEVMEEIVLKYHDFI 120
Query: 121 DEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSM 180
+EIYQML KD+ KDE K+VKIQWQKW GI+DR N+LV+ LNRSLKT+ EM WMKS+
Sbjct: 121 NEIYQMLKDDQKDDQKDEHKKVKIQWQKWRGILDRGNLLVEVLNRSLKTVEIEMEWMKSI 180
Query: 181 DEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKED 240
+ +EYS+R THVPDL+ALLRDIN RIE SPHF VSD+ R EVL +CLDELE SKE+
Sbjct: 181 EGLHREYSIRRTHVPDLLALLRDINERIELSPHFKAVSDMTKRDEVLPMCLDELETSKEE 240
Query: 241 LTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD 270
LTEMVEVI+ELK LDL+ + EDGE + E+ DE ++++
Sbjct: 241 LTEMVEVIQELKVLDLDKDEAVEDGERE---EIGIDEIEKVN 276
BLAST of Lsi01G001870 vs. ExPASy TrEMBL
Match:
A0A0A0KKJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521060 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 4.1e-68
Identity = 160/279 (57.35%), Postives = 207/279 (74.19%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA--------- 60
MTVTEREE+GNSSNT +VEIK E VE F L E ++ D+ +S + K
Sbjct: 1 MTVTEREEEGNSSNTYIVEIKNEPVE---FVLLQQEKQEEIDALSSVLLKGAYFYDDQLQ 60
Query: 61 LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDETEWGMDPLDITKEIVLKY 120
+ E+EEDAEES RSTKR RT ESD+ E S I A++EE++ E G+DPL++ +EIVLKY
Sbjct: 61 IEIEKEEDAEESERSTKRIRTAESDEVESSSIKNTASLEENQPELGIDPLEVLEEIVLKY 120
Query: 121 HDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSM 180
HDFI+EIYQML KDE+K+VKIQWQKW I+D+ N++V+ L RSLKT+ EM WMKS+
Sbjct: 121 HDFINEIYQML----KDEQKKVKIQWQKWRYILDKGNLIVEDLTRSLKTVEIEMEWMKSI 180
Query: 181 DEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKED 240
DE +EYS+R+THVPDL+ALLRDIN RIESSP+F +VSD+ R EVL +CLDELE S+E+
Sbjct: 181 DELHREYSIRKTHVPDLLALLRDINERIESSPNFKVVSDMKKRDEVLKMCLDELETSQEE 240
Query: 241 LTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD 270
L EM EVI+ELKELDL+D+E E + E++ D Q+++
Sbjct: 241 LAEMFEVIQELKELDLQDDEAVEDGEEEEIKVDALQKIN 272
BLAST of Lsi01G001870 vs. ExPASy TrEMBL
Match:
A0A0A0KIE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521050 PE=4 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 161/444 (36.26%), Postives = 207/444 (46.62%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALIS 60
MT TEREE+GNSS T +VEIK E E E+ED + LN L D++ +
Sbjct: 1 MTATEREEEGNSSTTNIVEIKNELVEFEPEPEQEDINGLLN--LASKDAYFYDGQPQIEI 60
Query: 61 EEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDETEWGMDPLDITKEIVLKYHDF 120
E+EEDAEES RSTKR RT E D+ E S I A+N++ ++ E G+DPL++ +EI+LKYHD
Sbjct: 61 EKEEDAEESERSTKRIRTAEPDEEESSSIKNASNLDVNQLELGIDPLEVMEEIILKYHDL 120
Query: 121 IDEIYQMLKDEPKDERKE------------------------------------------ 180
I+EIYQMLKDE KDE+K+
Sbjct: 121 INEIYQMLKDEQKDEQKDKQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQ 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 KDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQ 240
Query: 241 ----------------------------------------------------------VK 278
VK
Sbjct: 241 KDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQKDEQEDEQEDEQTDEHKKVK 300
BLAST of Lsi01G001870 vs. ExPASy TrEMBL
Match:
A0A5D3CBX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00350 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 6.5e-29
Identity = 96/263 (36.50%), Postives = 154/263 (58.56%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEE-- 60
M+ TE E+ GNSSNT + +IKKE ++E++ D+ ++D ++ EEE
Sbjct: 1 MSDTENEDSGNSSNTSMADIKKENIQEQEQDI--------------NLDICTLNCEEEID 60
Query: 61 ---DAEESARSTKRTRTKESDKAESMINKAANMEEDE----------TEWGMDPLDITKE 120
++E RS KR R S++AES N +E E E G DPL +T+E
Sbjct: 61 IISTSDELERSPKRPRITGSNEAES---SKKNEQESEYNPDSDTSTFNEIGQDPLLVTEE 120
Query: 121 IVLKYHDFIDEIYQMLKDEPKDERKEVKIQWQKWC-GIIDRANVLVKSLNRSLKTLAFEM 180
++LKY++FID +YQ+LK+ DE K Q W IIDR + LV +L R L+ +A +M
Sbjct: 121 VLLKYYEFIDYVYQILKN---DEEK------QDWSFEIIDRVDTLVVTLGRRLRVVALDM 180
Query: 181 AWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDEL 240
A ++++DE + Y ++TH+P +++ +R +N I SS F LVSDI RG+VL+ CL E
Sbjct: 181 AGLEAVDELQNIYEFKKTHIPVILSAIRQVNVEIASSSSFRLVSDIKNRGKVLSNCLGEF 237
Query: 241 ERSKEDLTEMVEVIEELKELDLE 248
ER +++L++ ++ ++ +K +E
Sbjct: 241 ERWRQELSQRIDAMQPMKRRAME 237
BLAST of Lsi01G001870 vs. ExPASy TrEMBL
Match:
A0A0A0KH35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185210 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 3.3e-25
Identity = 95/256 (37.11%), Postives = 147/256 (57.42%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDA 60
MT+TE EE NSSNTK +IK + +++++ D +N + S +I+ L +
Sbjct: 1 MTLTENEENANSSNTKTPDIKNKNIQQQEQD--INLQICASTSQEQNIEIVLTN------ 60
Query: 61 EESARSTKRTRTKESDKAESMINKAANMEEDE-----TEWGMDPLDITKEIVLKYHDFID 120
EE RS KR+R ESD+AES N N +E + G DPL +EI+LKY+DFI+
Sbjct: 61 EELVRSPKRSRITESDEAESSKN---NEQESYFFLGCEDLGEDPLLEAEEILLKYNDFIE 120
Query: 121 EIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKK 180
+YQ+LK+ DE+K Q W I+ R L L+ L L F++ ++ F+K
Sbjct: 121 YVYQILKN---DEKK------QDWSEIVKRVQNLANLLHLKLAVLIFDIECLEQHPRFEK 180
Query: 181 EYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMV 240
+Y+ R +H+P++I ++ IN I SS FSLV D R +VL +CL E ER ++ L+ ++
Sbjct: 181 QYNFRLSHIPNIITVIEQINIEIISSKCFSLVLDNKNRRKVLPICLREFERWRQQLSLLI 236
Query: 241 EVIEELKELDLEDEED 252
E ++ LK++ LE + D
Sbjct: 241 EKVQRLKKMALEIDRD 236
BLAST of Lsi01G001870 vs. NCBI nr
Match:
XP_038881500.1 (interaptin-like [Benincasa hispida])
HSP 1 Score: 320.9 bits (821), Expect = 1.1e-83
Identity = 195/300 (65.00%), Postives = 228/300 (76.00%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEV------EEEDFDLWLNEVLKDFD--SFTSSIDKAL 60
MTVTE+ E+ NSSNTK+VEIKKE+V EE+D DLWLNE++KD D I+K L
Sbjct: 1 MTVTEKSERANSSNTKVVEIKKEQVEGGEEEEEKDIDLWLNELVKDSDLNDHQLPIEKDL 60
Query: 61 ISEE--EEDAEESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPLDITKEIVLKY 120
I+EE EEDAEE RSTKRTRT ES M N AAN E DE+EWG+DPL+IT+EIVLKY
Sbjct: 61 INEEEDEEDAEELERSTKRTRTTES----MMKNTAANAEADESEWGIDPLEITEEIVLKY 120
Query: 121 HDFIDEIYQMLKDEPK------DERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEM 180
DFI +I+QMLKDE K DE E KIQWQKW I++RA VLV++LNR L TLA EM
Sbjct: 121 RDFIHDIFQMLKDEQKEDKEKEDEENEAKIQWQKWSEILERAKVLVETLNRGLGTLALEM 180
Query: 181 AWMKSMDEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDEL 240
WMKS+DEF+KEY+LRETHVPDL+ALLRDINT IESS HF LVSD+ R EVL++CLDEL
Sbjct: 181 EWMKSIDEFEKEYTLRETHVPDLLALLRDINTGIESSTHFRLVSDMKNRDEVLSMCLDEL 240
Query: 241 ERSKEDLTEMVEVIEELKELDL-------EDEEDGELDLDLELEADEFQELDLPDAEETE 278
ERS E+LTEMVEVI+ELKEL+L ED EDGE +L LELE DE++ELDL E+TE
Sbjct: 241 ERSNEELTEMVEVIQELKELELQDVEEDGEDGEDGEDELVLELEDDEYEELDLEVDEKTE 296
BLAST of Lsi01G001870 vs. NCBI nr
Match:
KAA0052577.1 (hypothetical protein E6C27_scaffold120G001820 [Cucumis melo var. makuwa] >TYK13248.1 hypothetical protein E5676_scaffold255G008660 [Cucumis melo var. makuwa])
HSP 1 Score: 284.6 bits (727), Expect = 8.8e-73
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEV-----EEEDFDLWLNEVLKDFDSFTSSIDKALISE 60
MTVTEREE+GNSSNT +VEIKKE V E++ D LN LKD S D+ I
Sbjct: 1 MTVTEREEEGNSSNTNIVEIKKEPVEFDQEEQDGIDALLNLALKD---GCFSDDQLQIDN 60
Query: 61 EEEDAEESARSTKRTRTKESDKAESM-INKAANMEEDETEWGMDPLDITKEIVLKYHDFI 120
EEED EES RSTKRTRT ESD+AES+ I N+E ++ E GMDPL++ +EIVLKYHDFI
Sbjct: 61 EEEDTEESERSTKRTRTAESDEAESLAIKNTGNLEANQPELGMDPLEVMEEIVLKYHDFI 120
Query: 121 DEIYQML----KDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSM 180
+EIYQML KD+ KDE K+VKIQWQKW GI+DR N+LV+ LNRSLKT+ EM WMKS+
Sbjct: 121 NEIYQMLKDDQKDDQKDEHKKVKIQWQKWRGILDRGNLLVEVLNRSLKTVEIEMEWMKSI 180
Query: 181 DEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKED 240
+ +EYS+R THVPDL+ALLRDIN RIE SPHF VSD+ R EVL +CLDELE SKE+
Sbjct: 181 EGLHREYSIRRTHVPDLLALLRDINERIELSPHFKAVSDMTKRDEVLPMCLDELETSKEE 240
Query: 241 LTEMVEVIEELKELDLEDE---EDGELDLDLELEADEFQELD 270
LTEMVEVI+ELK LDL+ + EDGE + E+ DE ++++
Sbjct: 241 LTEMVEVIQELKVLDLDKDEAVEDGERE---EIGIDEIEKVN 276
BLAST of Lsi01G001870 vs. NCBI nr
Match:
KGN49359.1 (hypothetical protein Csa_002997 [Cucumis sativus])
HSP 1 Score: 268.1 bits (684), Expect = 8.6e-68
Identity = 160/279 (57.35%), Postives = 207/279 (74.19%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKA--------- 60
MTVTEREE+GNSSNT +VEIK E VE F L E ++ D+ +S + K
Sbjct: 1 MTVTEREEEGNSSNTYIVEIKNEPVE---FVLLQQEKQEEIDALSSVLLKGAYFYDDQLQ 60
Query: 61 LISEEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDETEWGMDPLDITKEIVLKY 120
+ E+EEDAEES RSTKR RT ESD+ E S I A++EE++ E G+DPL++ +EIVLKY
Sbjct: 61 IEIEKEEDAEESERSTKRIRTAESDEVESSSIKNTASLEENQPELGIDPLEVLEEIVLKY 120
Query: 121 HDFIDEIYQMLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSM 180
HDFI+EIYQML KDE+K+VKIQWQKW I+D+ N++V+ L RSLKT+ EM WMKS+
Sbjct: 121 HDFINEIYQML----KDEQKKVKIQWQKWRYILDKGNLIVEDLTRSLKTVEIEMEWMKSI 180
Query: 181 DEFKKEYSLRETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKED 240
DE +EYS+R+THVPDL+ALLRDIN RIESSP+F +VSD+ R EVL +CLDELE S+E+
Sbjct: 181 DELHREYSIRKTHVPDLLALLRDINERIESSPNFKVVSDMKKRDEVLKMCLDELETSQEE 240
Query: 241 LTEMVEVIEELKELDLEDEEDGELDLDLELEADEFQELD 270
L EM EVI+ELKELDL+D+E E + E++ D Q+++
Sbjct: 241 LAEMFEVIQELKELDLQDDEAVEDGEEEEIKVDALQKIN 272
BLAST of Lsi01G001870 vs. NCBI nr
Match:
XP_011658523.2 (rho GTPase-activating protein gacV [Cucumis sativus] >KAE8647736.1 hypothetical protein Csa_004393 [Cucumis sativus])
HSP 1 Score: 243.8 bits (621), Expect = 1.7e-60
Identity = 160/332 (48.19%), Postives = 206/332 (62.05%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKE------EVEEEDFDLWLNEVLKDFDSFTSSIDKALIS 60
MT TEREE+GNSS T +VEIK E E E+ED + LN L D++ +
Sbjct: 1 MTATEREEEGNSSTTNIVEIKNELVEFEPEPEQEDINGLLN--LASKDAYFYDGQPQIEI 60
Query: 61 EEEEDAEESARSTKRTRTKESDKAE-SMINKAANMEEDETEWGMDPLDITKEIVLKYHDF 120
E+EEDAEES RSTKR RT E D+ E S I A+N++ ++ E G+DPL++ +EI+LKYHD
Sbjct: 61 EKEEDAEESERSTKRIRTAEPDEEESSSIKNASNLDVNQLELGIDPLEVMEEIILKYHDL 120
Query: 121 IDEIYQMLKDEPKDERKE------------------------------------------ 180
I+EIYQMLKDE KDE+K+
Sbjct: 121 INEIYQMLKDEQKDEQKDKQKDEQKDEQKDEQKDEQKDEQQDEQKDEQKDEQEDEQEDEQ 180
Query: 181 ------VKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSLRETHVP 240
VKIQWQKW I+D+ N++V+ LN SLKT+ EM WMKS+DE +EYS+R+THVP
Sbjct: 181 TDEHKKVKIQWQKWRDILDKGNLMVEDLNGSLKTVEIEMEWMKSVDELHREYSIRKTHVP 240
Query: 241 DLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIEELKELD 278
DL+ALLRDIN RIESSP+F +VSD+ R VL +CLDELE S+E+L EMVEVI+ELKEL
Sbjct: 241 DLLALLRDINERIESSPNFKVVSDMKKRDGVLKMCLDELETSQEELAEMVEVIQELKELH 300
BLAST of Lsi01G001870 vs. NCBI nr
Match:
XP_038902312.1 (myelin transcription factor 1-like [Benincasa hispida])
HSP 1 Score: 208.4 bits (529), Expect = 8.1e-50
Identity = 133/278 (47.84%), Postives = 189/278 (67.99%), Query Frame = 0
Query: 1 MTVTEREEKGNSSNTKLVEIKKEEVEEEDFDLWLNEVLKDFDSFTSSIDKALISEEEEDA 60
MTV EREE+GNSSNTK+ E KK+ VEEE+ D+ L + + I K I+EE +D
Sbjct: 1 MTVREREERGNSSNTKVAENKKQNVEEEEEDINLQ---IGASNSQNQIKKVRITEESKDG 60
Query: 61 EESARSTKRTRTKESDKAESMINKAANMEEDETEWGMDPLDITKEIVLKYHDFIDEIY-Q 120
EES RS+KR+R KES++AES IN+ E D +E G DPL T+EIV++YHDFID IY Q
Sbjct: 61 EESERSSKRSRIKESEEAESTINEEEE-ESDSSEVGKDPLLATEEIVMEYHDFIDYIYHQ 120
Query: 121 MLKDEPKDERKEVKIQWQKWCGIIDRANVLVKSLNRSLKTLAFEMAWMKSMDEFKKEYSL 180
+LK++ QKW I++R +LVK++NRSL+T+ EM ++++++F+K+Y
Sbjct: 121 ILKEDE-----------QKWSEIVERGKLLVKTVNRSLRTVKLEMECIEAVEDFEKQYLF 180
Query: 181 RETHVPDLIALLRDINTRIESSPHFSLVSDINMRGEVLTLCLDELERSKEDLTEMVEVIE 240
R+TH+P +++LLR IN+RIESS +F LVS+I R +VL +CL ELE SK++L+EM++VI+
Sbjct: 181 RKTHIPQILSLLRHINSRIESSTNFRLVSNIKNRRKVLPMCLRELETSKQELSEMIDVIQ 240
Query: 241 ELKELDLEDEEDGELDLDLELEADEFQELDLPDAEETE 278
LKELDL+ E+D + + D D EETE
Sbjct: 241 VLKELDLKSEDDDD-------------DADDDDEEETE 250
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UDN3 | 4.3e-73 | 60.99 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KKJ1 | 4.1e-68 | 57.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521060 PE=4 SV=1 | [more] |
A0A0A0KIE8 | 1.3e-48 | 36.26 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521050 PE=4 SV=1 | [more] |
A0A5D3CBX0 | 6.5e-29 | 36.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KH35 | 3.3e-25 | 37.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185210 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_038881500.1 | 1.1e-83 | 65.00 | interaptin-like [Benincasa hispida] | [more] |
KAA0052577.1 | 8.8e-73 | 60.99 | hypothetical protein E6C27_scaffold120G001820 [Cucumis melo var. makuwa] >TYK132... | [more] |
KGN49359.1 | 8.6e-68 | 57.35 | hypothetical protein Csa_002997 [Cucumis sativus] | [more] |
XP_011658523.2 | 1.7e-60 | 48.19 | rho GTPase-activating protein gacV [Cucumis sativus] >KAE8647736.1 hypothetical ... | [more] |
XP_038902312.1 | 8.1e-50 | 47.84 | myelin transcription factor 1-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |