Lsi01G001490 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G001490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr01: 1536587 .. 1538983 (+)
RNA-Seq Expression	Lsi01G001490
Synteny	Lsi01G001490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTAGGAAACTTGATATCAAACAGAGAGTAGATCATGATAAAATTGTCCCGACATTCTAGCTTCCTAACCCACCATGCAGTATTACTAGACTCGATAAAAAATAATAATAATAAATAAATAAATAAATAAAATCCATGAAGGATAGAAGCAAAGAATGATTCTTTCCTCTACAAGAGTTTCATTCTTTCTAGATACAAATTATATTTAAAAATTATAGCTGTTCGCCCTCTTTCAGCATCATGGTCTCAACATCTCTGTTCTTGGAACATCCGTTGAAGTTTTGATTACTGTTGACACAATCCAGAATGTCACATTCCTCATTAGACTTTGCAAGGGACTTTTTTCTGATAATGAGAAACTTCCTCAGGAATTTTAAAATCCAAACCAAATATGGAACAGGGACCGCAGCGTCGAGTGTCATCATCTCGGGCATTGGTCTTGTGTTGCTTTATGTCTTTAGTCTGAAGAAAAAGGAGAAATTTGACCAGCGTGTTCTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACTAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAGATATCTGGAGAAGTTAAAGAAAATGATCAACACAGACCGTCCTAATTTCATGAAGCTCCAGGTTAAGCATTTAACTCTTACATCATGTTTGAGAGTGAATTCTGAAATGATTGAAATCACTTTTTGTCAGGTCCAAAATTATTTTTGATCATGTCTTTTAATCATGATTAAAAGTATTTTTTGAAAAATAATTTTGAACGTGACAAAAGTGATTTTGTTGGAAAAACATTACAGATTATTGCTGATCAATCAATTCATTCATGTATCAAATCAGTTGTGTGAAGGCTTATTTGATTTCCTTGATGTGCAACAGAGCATTGTTGCAAAGCTGGAAATGAGAGGACAAGAAGATAAAGCTATTGAAATATTAAAAAGAGCAGCAAAAGAAGCTCAGAAGAATTCACTTCCACACCAAGAATATGAATATCAGATGCTCCTCGTGGAAGCACTCATTTACAAGGTGTTTCTCATTACAAACTCGTTAACTATTTGTTGAAATTTTATGTGTTTGTATGCATAAATCATAGGCCAAAATGCAGGGCTACTTGCAGAAGAATGAACAGGTTTCTCAAAGAAATATAACAATTGTCTGCAAATATGAAGCACATATATGAGCATATACATGAAACTAGTTAAACATATAATATGATGTTAATTATACATGGTATGTAATGACAAGAGGATGCTGAAAATATATACCTGTAGATAAATTTTCAAAGCATACTCTTCAAGTTTGACATGGAACAAAAATTGTGAATCAATCAAGCCTCCTACTCTCTTTTTTGATGCATTTCTAGGGAAATATTAGGGAGGCGGAAATGGTTCCATGCTTGAATAATGAGGACACATCGGATGTTCGACGCTCATTATATAAGGTATATTATTTCTCATAAATTTCTTGTAGCGAAAAGGCCAAAACTATACAAATAACCTTATATTAAGTAATAAATTGATCGGGTTTATCAAAGGAAGGTCAATTGACCAGCTAGAAAGTAGATGGGTTGCCATTTTTTTGTTGAGTTCATACAGTCCACCATAATTTGGCTCAAACCCAATGATGACTTGTTGCAATTAAAAGCTTCCCCTTTAATAGTAGTTTTAAAACATTTATGAAAGATCAAAGATAATATTGCAAAGAATATGAGCACTTTTGAAACAAAAGACGAAATTGAGAAGCATTTTTTATAATTTAACCAAACTCCAAATCCTATTGCAAGGATTAGTATCTATAAATCATGCTCTTTCATTCACCCTAATAGCTTAAAGACCTTATATTTCAACAACAAACAAGTTGATGGCAAGTTCAAAAGCAAATGCATTCAGACTTTTCTCAGTGGCATTTATTCAAACATTTTGCAGGCTATAATTCAACTGTTGCTGAATAACACCCAGAAAGCAAGAGAAGAATGGGAAGAGTTTAGGAATATGAGAAACCAATTCCTCTTACCACCTGACGTTAAAGACTCTCACTTTTACACTCTCCTGGCCGAATTCGAGCAGTTTAAACTAGTCGTCGACCTGCTCAAAAAAGACATTCATGAGAAGCAGAAAGCAAAATAGTGGGGGAAAAAAGAAAAAGAATTATAACTATTTTCTTTCTTGGAAATACATTTTACAGCAATTATGTATGCTATGGGTAGAAATGTGAATAATTGAGGAAATTCCAAATAACAAAAATAAAATGGAGGGGAAATTTGAATACCCCCATTCTTCTCGTCGGACCTGATGGTAAAACCAGTCTTAATCCTATGCACCCTTTTCCTTTTACACAATATATATATTTAAAAAAAAA

mRNA sequence

ATGGAAAGGACCGCAGCGTCGAGTGTCATCATCTCGGGCATTGGTCTTGTGTTGCTTTATGTCTTTAGTCTGAAGAAAAAGGAGAAATTTGACCAGCGTGTTCTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACTAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAGATATCTGGAGAAATTATTGCTGATCAATCAATTCATTCATGTATCAAATCAGTTGTGTGAAGGCTTATTTGATTTCCTTGATGTGCAACAGAGCATTGTTGCAAAGCTGGAAATGAGAGGACAAGAAGATAAAGCTATTGAAATATTAAAAAGAGCAGCAAAAGAAGCTCAGAAGAATTCACTTCCACACCAAGAATATGAATATCAGATGCTCCTCGTGGAAGCACTCATTTACAAGGCCAAAATGCAGGGCTACTTGCAGAAGAATGAACAGGGAAATATTAGGGAGGCGGAAATGGTTCCATGCTTGAATAATGAGGACACATCGGATGTTCGACGCTCATTATATAAGGCTATAATTCAACTGTTGCTGAATAACACCCAGAAAGCAAGAGAAGAATGGGAAGAGTTTAGGAATATGAGAAACCAATTCCTCTTACCACCTGACGTTAAAGACTCTCACTTTTACACTCTCCTGGCCGAATTCGAGCAGTTTAAACTAGTCGTCGACCTGCTCAAAAAAGACATTCATGAGAAGCAGAAAGCAAAATAGTGGGGGAAAAAAGAAAAAGAATTATAACTATTTTCTTTCTTGGAAATACATTTTACAGCAATTATGTATGCTATGGGTAGAAATGTGAATAATTGAGGAAATTCCAAATAACAAAAATAAAATGGAGGGGAAATTTGAATACCCCCATTCTTCTCGTCGGACCTGATGGTAAAACCAGTCTTAATCCTATGCACCCTTTTCCTTTTACACAATATATATATTTAAAAAAAAA

Coding sequence (CDS)

ATGGAAAGGACCGCAGCGTCGAGTGTCATCATCTCGGGCATTGGTCTTGTGTTGCTTTATGTCTTTAGTCTGAAGAAAAAGGAGAAATTTGACCAGCGTGTTCTTACAAGGTCAATGTCCATGGGAGCTCTACATGGTGGCAAACTAGCCATGAAAAGATTGCTTCAATACCACAAAATGAGAGCAACCCCAAAAAACAAAGATAGATATCTGGAGAAATTATTGCTGATCAATCAATTCATTCATGTATCAAATCAGTTGTGTGAAGGCTTATTTGATTTCCTTGATGTGCAACAGAGCATTGTTGCAAAGCTGGAAATGAGAGGACAAGAAGATAAAGCTATTGAAATATTAAAAAGAGCAGCAAAAGAAGCTCAGAAGAATTCACTTCCACACCAAGAATATGAATATCAGATGCTCCTCGTGGAAGCACTCATTTACAAGGCCAAAATGCAGGGCTACTTGCAGAAGAATGAACAGGGAAATATTAGGGAGGCGGAAATGGTTCCATGCTTGAATAATGAGGACACATCGGATGTTCGACGCTCATTATATAAGGCTATAATTCAACTGTTGCTGAATAACACCCAGAAAGCAAGAGAAGAATGGGAAGAGTTTAGGAATATGAGAAACCAATTCCTCTTACCACCTGACGTTAAAGACTCTCACTTTTACACTCTCCTGGCCGAATTCGAGCAGTTTAAACTAGTCGTCGACCTGCTCAAAAAAGACATTCATGAGAAGCAGAAAGCAAAATAG

Protein sequence

MERTAASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPKNKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEAQKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLYKAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDIHEKQKAK

Homology

[Close]

BLAST of Lsi01G001490 vs. ExPASy TrEMBL
Match: A0A6J1CZJ5 (uncharacterized protein LOC111015701 OS=Momordica charantia OX=3673 GN=LOC111015701 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 165/248 (66.53%), Postives = 191/248 (77.02%), Query Frame = 0


Query: 5   AASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATP 64
           AASSVIISGIGLVL+YV++ +K+EK D+RV  RSMS+GALHGGKLAMKRLLQY KMRAT 
Sbjct: 36  AASSVIISGIGLVLIYVYTQRKREKNDRRVFMRSMSIGALHGGKLAMKRLLQYQKMRATE 95

Query: 65  KNKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKE 124
           KN+D+ LEKL            + +   DF  + QSIVAKLEMRGQEDKAIEILK+AAKE
Sbjct: 96  KNQDQVLEKL---------EKMIKDCAPDFAKL-QSIVAKLEMRGQEDKAIEILKKAAKE 155

Query: 125 AQKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSL 184
           A++NSL H EYEYQ+LLVE LIYK            GNI EAE   CLN E+TSDVRRSL
Sbjct: 156 AKENSLLHYEYEYQILLVEMLIYK------------GNIGEAERASCLNQEETSDVRRSL 215

Query: 185 YKAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKD 244
           YKAIIQ+LLNN +KA+E+WEEF+ MR++FLLPPDVKDS FY L+ EFE FK VVDLL KD
Sbjct: 216 YKAIIQVLLNNPKKAKEKWEEFKEMRSRFLLPPDVKDSQFYKLVTEFEMFKQVVDLLGKD 261

Query: 245 IHEKQKAK 253
           I E+ K K
Sbjct: 276 IEERNKEK 261

[Close]

BLAST of Lsi01G001490 vs. ExPASy TrEMBL
Match: A0A6J1EIU2 (uncharacterized protein LOC111433729 OS=Cucurbita moschata OX=3662 GN=LOC111433729 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.6e-66
Identity = 147/247 (59.51%), Postives = 178/247 (72.06%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           ASSVIISGIGL+L+Y ++ +KKEK  QRV TRSMS+GALHGG++AMKR+LQYHK+RA  +
Sbjct: 37  ASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
            +  YLEKL          N       DF  + Q ++AK+EM GQEDKAIEILK+A KEA
Sbjct: 97  IQHDYLEKL---------ENMTNTDTPDFPHI-QDVLAKMEMIGQEDKAIEILKKAVKEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
           ++ SL + EYEYQMLLVEALIYK            G+I EA    CLN+++ SDVRR LY
Sbjct: 157 KEKSLSYHEYEYQMLLVEALIYK------------GDIEEAAKAECLNHDEPSDVRRLLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           K II+LLLNN QKA EEWE+FR MR QF LPPD+KDS FY L+  FE FK VVDLLK+DI
Sbjct: 217 KTIIELLLNNPQKAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDI 261

Query: 246 HEKQKAK 253
            +K+K K
Sbjct: 277 DQKKKTK 261

[Close]

BLAST of Lsi01G001490 vs. ExPASy TrEMBL
Match: A0A6J1KTB7 (uncharacterized protein LOC111497439 OS=Cucurbita maxima OX=3661 GN=LOC111497439 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-65
Identity = 145/247 (58.70%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           ASSVIISGIGL+L+Y ++ +KKEK  QRV TRSMS+GALHGG++AMKR+LQY KMRA  +
Sbjct: 37  ASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYQKMRANQE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
            +  YLEKL          N       DF  + Q+++ K+EMRGQEDKAIEILK+A KEA
Sbjct: 97  IQYDYLEKL---------ENTTSTDTPDFPHI-QTVLTKMEMRGQEDKAIEILKKAVKEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
           ++ SL + EYEYQMLLVEALIYK            G+I EA    CLN+++ SDVRR LY
Sbjct: 157 KEQSLSYHEYEYQMLLVEALIYK------------GDIEEAAKAECLNHDEPSDVRRLLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           K II+LLLNN QKA EEWE+FR MR  F LPPD++DS FY L+  FE FK VVDLLK+DI
Sbjct: 217 KTIIELLLNNPQKAEEEWEKFREMRRHFFLPPDIRDSGFYKLVNHFEDFKRVVDLLKQDI 261

Query: 246 HEKQKAK 253
            +K+K K
Sbjct: 277 DQKKKTK 261

[Close]

BLAST of Lsi01G001490 vs. ExPASy TrEMBL
Match: A0A0A0KLZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523380 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 141/247 (57.09%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           AS+ I+SG+GLVL+Y  +   K+K  QRV TRS+S+GALHGGK+AMKRLLQ+ KMRA P+
Sbjct: 37  ASTFIVSGVGLVLVYFVTRILKKKNSQRVFTRSISIGALHGGKIAMKRLLQFQKMRANPE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
           NKD++++KL   +  I +  ++     +F  + Q+IV KLEM GQEDKAIE LK AA+EA
Sbjct: 97  NKDKFMKKL---DSRIKLDTKIESEHPNFTKI-QNIVTKLEMLGQEDKAIEKLKNAAEEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
           +K SLP  E+EYQMLLVE  IYK            G++ +AE +PCL N+ TSDVRR LY
Sbjct: 157 KKKSLPLYEHEYQMLLVELYIYK------------GDLVKAEELPCLKNDATSDVRRPLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           KAII++L N TQ+A +EWEEFR MR+ FLLPPDVKDSHFY LLA+F+ FK VV +L++DI
Sbjct: 217 KAIIKVLQNETQEAIKEWEEFREMRSAFLLPPDVKDSHFYALLADFDSFKRVVQVLREDI 267

Query: 246 HEKQKAK 253
            +K +AK
Sbjct: 277 FKKPRAK 267

[Close]

BLAST of Lsi01G001490 vs. ExPASy TrEMBL
Match: A0A5D3CMZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009020 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 9.4e-43
Identity = 107/193 (55.44%), Postives = 135/193 (69.95%), Query Frame = 0


Query: 60  MRATPKNKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILK 119
           MRA P+ KD+YL+KL           ++   L DFL + Q+IVAKLEM GQEDK IE LK
Sbjct: 1   MRANPEKKDKYLKKL---------DTKIESDLPDFLKL-QNIVAKLEMLGQEDKVIEKLK 60

Query: 120 RAAKEAQKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSD 179
            AA++A+K S P  EYEYQMLLVE  IYK            G   +AE +PCLNN D SD
Sbjct: 61  IAAEKAEK-SFPLYEYEYQMLLVELYIYK------------GEFAKAEELPCLNNNDNSD 120

Query: 180 VRRSLYKAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVD 239
           VRR L+KAII++LLN TQ+A +EWEEFR +R+ +LLPPDVKDS FYTLLA+F+ F+ VV 
Sbjct: 121 VRRPLFKAIIKVLLNETQEAIKEWEEFRKLRSDYLLPPDVKDSQFYTLLADFDSFERVVK 170

Query: 240 LLKKDIHEKQKAK 253
           +L++DI +K +AK
Sbjct: 181 VLREDIFKKPRAK 170

[Close]

BLAST of Lsi01G001490 vs. NCBI nr
Match: XP_038882985.1 (uncharacterized protein LOC120074072 [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 8.3e-78
Identity = 173/249 (69.48%), Postives = 189/249 (75.90%), Query Frame = 0


Query: 5   AASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATP 64
           AAS  IISGIGLVL+YVF+   KEK DQRV  RS+SMGALH GKLAMKRLLQYHKMRATP
Sbjct: 36  AASGFIISGIGLVLIYVFTQIIKEKNDQRVFIRSISMGALHDGKLAMKRLLQYHKMRATP 95

Query: 65  KNKDRYLEKL-LLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAK 124
           K K+ YLEK   LIN      N             QSI+AKLEM GQEDKAIEILKRAA+
Sbjct: 96  KKKNTYLEKFEKLINTDTDRPN---------FPKLQSILAKLEMIGQEDKAIEILKRAAR 155

Query: 125 EAQKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRS 184
           EA++NS P+ EYEYQMLLVEALIYK            GN   AE VPCLNN D SDVRRS
Sbjct: 156 EARENSRPYHEYEYQMLLVEALIYK------------GNFAAAEKVPCLNNNDASDVRRS 215

Query: 185 LYKAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKK 244
           LYKAIIQLLLNNTQKA EEWEEF+NMR+ FLLPPDVKDS F+TLLA+F+ FK VV++LKK
Sbjct: 216 LYKAIIQLLLNNTQKAEEEWEEFKNMRSHFLLPPDVKDSQFHTLLADFQSFKQVVNVLKK 263

Query: 245 DIHEKQKAK 253
           DI EKQKAK
Sbjct: 276 DIFEKQKAK 263

[Close]

BLAST of Lsi01G001490 vs. NCBI nr
Match: XP_022146501.1 (uncharacterized protein LOC111015701 [Momordica charantia])

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-75
Identity = 165/248 (66.53%), Postives = 191/248 (77.02%), Query Frame = 0


Query: 5   AASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATP 64
           AASSVIISGIGLVL+YV++ +K+EK D+RV  RSMS+GALHGGKLAMKRLLQY KMRAT 
Sbjct: 36  AASSVIISGIGLVLIYVYTQRKREKNDRRVFMRSMSIGALHGGKLAMKRLLQYQKMRATE 95

Query: 65  KNKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKE 124
           KN+D+ LEKL            + +   DF  + QSIVAKLEMRGQEDKAIEILK+AAKE
Sbjct: 96  KNQDQVLEKL---------EKMIKDCAPDFAKL-QSIVAKLEMRGQEDKAIEILKKAAKE 155

Query: 125 AQKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSL 184
           A++NSL H EYEYQ+LLVE LIYK            GNI EAE   CLN E+TSDVRRSL
Sbjct: 156 AKENSLLHYEYEYQILLVEMLIYK------------GNIGEAERASCLNQEETSDVRRSL 215

Query: 185 YKAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKD 244
           YKAIIQ+LLNN +KA+E+WEEF+ MR++FLLPPDVKDS FY L+ EFE FK VVDLL KD
Sbjct: 216 YKAIIQVLLNNPKKAKEKWEEFKEMRSRFLLPPDVKDSQFYKLVTEFEMFKQVVDLLGKD 261

Query: 245 IHEKQKAK 253
           I E+ K K
Sbjct: 276 IEERNKEK 261

[Close]

BLAST of Lsi01G001490 vs. NCBI nr
Match: XP_022926668.1 (uncharacterized protein LOC111433729 [Cucurbita moschata])

HSP 1 Score: 262.7 bits (670), Expect = 3.3e-66
Identity = 147/247 (59.51%), Postives = 178/247 (72.06%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           ASSVIISGIGL+L+Y ++ +KKEK  QRV TRSMS+GALHGG++AMKR+LQYHK+RA  +
Sbjct: 37  ASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
            +  YLEKL          N       DF  + Q ++AK+EM GQEDKAIEILK+A KEA
Sbjct: 97  IQHDYLEKL---------ENMTNTDTPDFPHI-QDVLAKMEMIGQEDKAIEILKKAVKEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
           ++ SL + EYEYQMLLVEALIYK            G+I EA    CLN+++ SDVRR LY
Sbjct: 157 KEKSLSYHEYEYQMLLVEALIYK------------GDIEEAAKAECLNHDEPSDVRRLLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           K II+LLLNN QKA EEWE+FR MR QF LPPD+KDS FY L+  FE FK VVDLLK+DI
Sbjct: 217 KTIIELLLNNPQKAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDI 261

Query: 246 HEKQKAK 253
            +K+K K
Sbjct: 277 DQKKKTK 261

[Close]

BLAST of Lsi01G001490 vs. NCBI nr
Match: KAG7026464.1 (hypothetical protein SDJN02_10464, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 4.3e-66
Identity = 146/247 (59.11%), Postives = 180/247 (72.87%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           ASSVIISGIGL+L+Y ++ +KKEK  QRV TRSMS+GALHGG++AMKR+LQYHK+RA  +
Sbjct: 37  ASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKIRANQE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
            +  YLEKL          N +     DF  + Q+++AK+EM GQEDKAIEILK+A KEA
Sbjct: 97  IQHDYLEKL---------ENTMNTDTPDFPHI-QNVMAKMEMIGQEDKAIEILKKAVKEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
           ++ SL + EYEYQMLLVEALIYK            G+I EA    CLN+++ SDVRR LY
Sbjct: 157 KEKSLSYHEYEYQMLLVEALIYK------------GDIEEAAKAECLNHDEPSDVRRLLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           K II+LLLNN Q+A EEWE+FR MR QF LPPD+KDS FY L+  FE FK VVDLLK+DI
Sbjct: 217 KTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDI 261

Query: 246 HEKQKAK 253
            +K+K K
Sbjct: 277 DQKKKTK 261

[Close]

BLAST of Lsi01G001490 vs. NCBI nr
Match: XP_023518384.1 (uncharacterized protein LOC111781887 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 9.5e-66
Identity = 146/247 (59.11%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 6   ASSVIISGIGLVLLYVFSLKKKEKFDQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPK 65
           ASSVIISGIGL+L+Y ++ +KKEK  QRV TRSMS+GALHGG++AMKR+LQYHKMRA  +
Sbjct: 37  ASSVIISGIGLMLIYAYTQRKKEKKTQRVFTRSMSIGALHGGRIAMKRMLQYHKMRANQE 96

Query: 66  NKDRYLEKLLLINQFIHVSNQLCEGLFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEA 125
            +  YLE L          N       DF  + Q+++AK+EM GQEDKAIEILK+A KEA
Sbjct: 97  IQHHYLETL---------ENMTNTDTPDFPHI-QNVLAKMEMIGQEDKAIEILKKAVKEA 156

Query: 126 QKNSLPHQEYEYQMLLVEALIYKAKMQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLY 185
            + SL + EYEYQMLLVEALIYK            G+I EA    CLN+++ SDVRR LY
Sbjct: 157 NEKSLSYHEYEYQMLLVEALIYK------------GDIEEAAKAECLNHDEPSDVRRLLY 216

Query: 186 KAIIQLLLNNTQKAREEWEEFRNMRNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDI 245
           K II+LLLNN Q+A EEWE+FR MR QF LPPD+KDS FY L+  FE FK VVDLLK+DI
Sbjct: 217 KTIIELLLNNPQEAEEEWEKFREMREQFFLPPDIKDSGFYKLVNHFEDFKRVVDLLKQDI 261

Query: 246 HEKQKAK 253
            +K+K K
Sbjct: 277 DQKKKTK 261

[Close]

BLAST of Lsi01G001490 vs. TAIR 10
Match: AT2G34530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-23
Identity = 79/223 (35.43%), Postives = 117/223 (52.47%), Query Frame = 0


Query: 31  DQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPKNKDRYLEKLLLINQFIHVSNQLCEG 90
           D+R L++S+SMGA+ GGKLA++RLL  H  R    +         L N  +     L + 
Sbjct: 70  DERTLSKSVSMGAIRGGKLALQRLLDLHSYRGDTSS---------LANAELEFEALLSKE 129

Query: 91  LFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEAQKNSLPHQEYEYQMLLVEALIYKAK 150
             DF  +Q+ IV K+EM G+E K  E+LK+A ++A+K    H+ YE +MLLVE LIY   
Sbjct: 130 KPDFGLLQRDIV-KMEMSGKEAKGAELLKKALEKARKEGKGHEAYEIEMLLVEMLIY--- 189

Query: 151 MQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLYKAIIQLLLNNTQKAREE-WEEFRNM 210
                     GN+ EA    CL +E  +D RR LY+ II  L  +  K  EE +  FR +
Sbjct: 190 ---------LGNMEEASKCKCLEDEVITDARRPLYQTIIHYLQGHPMKQVEETFNRFREI 249

Query: 211 RNQFLLPPDVKDSHFYTLLAEFEQFKLVVDLLKKDIHEKQKAK 253
           +     P   ++     +   F++FK V++ LK +I +  K K
Sbjct: 250 QIGLQWPGSSEECEIDQV--TFDEFKKVMESLKHEIEDGNKRK 268

[Close]

BLAST of Lsi01G001490 vs. TAIR 10
Match: AT2G34530.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-19
Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 31  DQRVLTRSMSMGALHGGKLAMKRLLQYHKMRATPKNKDRYLEKLLLINQFIHVSNQLCEG 90
           D+R L++S+SMGA+ GGKLA++RLL  H  R    +         L N  +     L + 
Sbjct: 70  DERTLSKSVSMGAIRGGKLALQRLLDLHSYRGDTSS---------LANAELEFEALLSKE 129

Query: 91  LFDFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEAQKNSLPHQEYEYQMLLVEALIYKAK 150
             DF  +Q+ IV K+EM G+E K  E+LK+A ++A+K    H+ YE +MLLVE LIY   
Sbjct: 130 KPDFGLLQRDIV-KMEMSGKEAKGAELLKKALEKARKEGKGHEAYEIEMLLVEMLIY--- 189

Query: 151 MQGYLQKNEQGNIREAEMVPCLNNEDTSDVRRSLYKA 188
                     GN+ EA    CL +E  +D RR LY+A
Sbjct: 190 ---------LGNMEEASKCKCLEDEVITDARRPLYQA 204

[Close]

BLAST of Lsi01G001490 vs. TAIR 10
Match: AT2G34540.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 9.0e-06
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 93  DFLDVQQSIVAKLEMRGQEDKAIEILKRAAKEAQKNSLPHQEYEYQMLLVEALIYKAKMQ 152
           D   ++   V K++  G+ ++A+++L+ A    +  + P   +  QM LVE LI   + Q
Sbjct: 173 DIDSIKMEAVRKMK-EGKCEEAVQLLRDA--NMRYRNEPEANFNVQMALVEILILLERYQ 232

Query: 153 GYLQKNEQGNIREAEMVPCLNNEDT--SDVRRSLYKAIIQLLLNNTQKAREEWEEFR 208
                       EA    CLN+E+   SDVR  LYKAII  +L+   +A++ W+EFR
Sbjct: 233 ------------EAAEYSCLNDENAQISDVRIPLYKAIIYTMLDKDTEAKQCWKEFR 274

The following BLAST results are available for this feature:

BLAST of Lsi01G001490 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G001490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZJ5	1.9e-75	66.53	uncharacterized protein LOC111015701 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1EIU2	1.6e-66	59.51	uncharacterized protein LOC111433729 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A6J1KTB7	1.3e-65	58.70	uncharacterized protein LOC111497439 OS=Cucurbita maxima OX=3661 GN=LOC111497439...	[more]
A0A0A0KLZ3	2.8e-63	57.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523380 PE=4 SV=1	[more]
A0A5D3CMZ4	9.4e-43	55.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi01G001490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882985.1	8.3e-78	69.48	uncharacterized protein LOC120074072 [Benincasa hispida]	[more]
XP_022146501.1	3.9e-75	66.53	uncharacterized protein LOC111015701 [Momordica charantia]	[more]
XP_022926668.1	3.3e-66	59.51	uncharacterized protein LOC111433729 [Cucurbita moschata]	[more]
KAG7026464.1	4.3e-66	59.11	hypothetical protein SDJN02_10464, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023518384.1	9.5e-66	59.11	uncharacterized protein LOC111781887 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G001490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34530.1	1.3e-23	35.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G34530.2	4.2e-19	39.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G34540.2	9.0e-06	32.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	PANTHER	PTHR36350	TRANSMEMBRANE PROTEIN	coord: 5..251
None	No IPR available	PANTHER	PTHR36350:SF3	TRANSMEMBRANE PROTEIN	coord: 5..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G001490.1	Lsi01G001490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane