Lsi01G001270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G001270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	p21-activated protein kinase-interacting protein 1-like
Location	chr01: 1324872 .. 1326658 (-)
RNA-Seq Expression	Lsi01G001270
Synteny	Lsi01G001270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCCAAACCGGCCCCAACAACAATTTGAAAATCTTGGAGGACTTGAATCTTTGTTTCTACTGCTTTCTGAAACAAGATTGCGATACCTTCCCTGAAAAGAATCTCTGAATCGACCTCCTCATGAATTGGCTCCAAATTCTGGCATTCAAACTCCTCATTGCTTACAATAGCTGTAGAAGCATCATCCGGGATGCTGAAGAGAAGAATCAATTGAAGAAAGAAAGCTTGGAATACCTCTTACAGACTGAACTTTGGAGCTTGAGATCTTAAATACAGAATGCTGGAAATTTGGGGAGGAGGAGATTTTTGAGCATTGATGCACCCTTCCTAGTTCCTCCAAAAATCCGAACTTTCTTCTGCAAATCTAAATAAAGGAGAAGCCCCACATTTTCTTGAATGATGATATGGCAGAGCTGGCACACATTTCTTAGAATGCCCAAAAGTTGCATTAGAAATCTCAATAGTTGCATTAGGATTTTCAATAATTGAAGCTGATCTCCTCTTCCATCGAAGTTAAGTCATCTGCCTTTTCTTCTTCCAGCAAATCCAAGAAAGCATTAATATTCAAATGCTTTTGCATTTAATGTGATGAGAAAAGTTCATTAATAATAGGCTCCATGACAATACTAAAAAAAGGAGAAAGAGGAGAATTAATAACCTCATTAACCACATTGGAATTAAAGTTCATTGGCGGTCTCAAAAAACCGTTCCAGAGATCATTTTTCATCCTCTTTTAGTTCTCATGTTGATAGAAGTTTTTTCCCCCTTGTGTTCAATTGTTATGGAAACTTGACCATTTAATTAGTTTCTGTTACCTTTGGATATCTTTGGATATTTCATTCTATCAATGATATTGTTTCTTATCCAAAAAAAATGTTATGGAAACTTGGACAGAACGACATCCTACTTACAGGTGGAGAGGACCGTTGTCTTACGGCGTGGGATGTAAAAAGTGGGAAGGTGGCATATACAATAGAAGAAGCACATGCTGCCCGTGTCAAAGGAATTGTTGTACTCACAAAGAATTCCTCTGGTGCTTTCTCTGAAGATGATCCCCATGTAGTTGCATCTGCATCAACAGATGGAGTTATACGTGTCTGGGATGTTCGAATGACTGCTATTAAGGACAAGCCAAATCCATTAGCTGAGGCAAATACAAAGTCAAGACTGACTTGTCTTGCCGGATCCGCTCTTAAATGTATGATTTCTTTTCTTTTCTCCTTATGTTGCTTTACGCCTTTACCTACTCATTTCTATGATGCATTTTCATCGTTTCACTTACATGTTGCACTTTGATATCCATGCTTTCCTCTGTTGTTTTTAAGAAACAAAATGTATGTGCGACTTCACTTGCACCTTAACTATTCTAATCCATTTTTCCTGTCTTAATCAGCTTTTAGGCGACCGCAAGTCGGGAAGAACACATCAGATGAAGGGCAAGGCGTACCAAGTGCCACTGATAAGAAGAAGTCGGCTGAGTAAGGAAACTAAATAGCGTATATTGAGTTTGGTTGATTATTTGATGATACTGCTGGCTGCGGGGGTGAGAATTGTTCTTCATATGGTTTCCCTTATGTGCCTGCTGTAGTAATTTTTGACAAGAAAACAAGTGTTTATATTCATTCGCATAGGATATATTATTTAATCGTTTAGATCACTCCAATTTTTGTTAGTGGGCTTGACAATGGTATACAAATTGTTGATCTGTGGCTTGCTTCGTGATGCATAGTATCTGAAATGGTAAGTAATAGTAAACATTTTGGTACAACGTGAACGACTTCT

mRNA sequence

ATGAATGGGAAGGTGGCATATACAATAGAAGAAGCACATGCTGCCCGTGTCAAAGGAATTGTTGTACTCACAAAGAATTCCTCTGGTGCTTTCTCTGAAGATGATCCCCATGTAGTTGCATCTGCATCAACAGATGGAGTTATACGTGTCTGGGATGTTCGAATGACTGCTATTAAGGACAAGCCAAATCCATTAGCTGAGGCAAATACAAAGTCAAGACTGACTTGTCTTGCCGGATCCGCTCTTAAATCTTTTAGGCGACCGCAAGTCGGGAAGAACACATCAGATGAAGGGCAAGGCGTACCAAGTGCCACTGATAAGAAGAAGTCGGCTGAGTAAGGAAACTAAATAGCGTATATTGAGTTTGGTTGATTATTTGATGATACTGCTGGCTGCGGGGGTGAGAATTGTTCTTCATATGGTTTCCCTTATGTGCCTGCTGTAGTAATTTTTGACAAGAAAACAAGTGTTTATATTCATTCGCATAGGATATATTATTTAATCGTTTAGATCACTCCAATTTTTGTTAGTGGGCTTGACAATGGTATACAAATTGTTGATCTGTGGCTTGCTTCGTGATGCATAGTATCTGAAATGGTAAGTAATAGTAAACATTTTGGTACAACGTGAACGACTTCT

Coding sequence (CDS)

ATGAATGGGAAGGTGGCATATACAATAGAAGAAGCACATGCTGCCCGTGTCAAAGGAATTGTTGTACTCACAAAGAATTCCTCTGGTGCTTTCTCTGAAGATGATCCCCATGTAGTTGCATCTGCATCAACAGATGGAGTTATACGTGTCTGGGATGTTCGAATGACTGCTATTAAGGACAAGCCAAATCCATTAGCTGAGGCAAATACAAAGTCAAGACTGACTTGTCTTGCCGGATCCGCTCTTAAATCTTTTAGGCGACCGCAAGTCGGGAAGAACACATCAGATGAAGGGCAAGGCGTACCAAGTGCCACTGATAAGAAGAAGTCGGCTGAGTAA

Protein sequence

MNGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDKPNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATDKKKSAE

Homology

[Close]

BLAST of Lsi01G001270 vs. ExPASy Swiss-Prot
Match: Q5ZKU8 (p21-activated protein kinase-interacting protein 1-like OS=Gallus gallus OX=9031 GN=PAK1IP1 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-06
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 30  AFSEDDPHVVASASTDGVIRVWDVRMTAIKDKPNPLAEANTKSRLTCLA-----GSALKS 89
           +F  +  HV+ +AS+DG I+VW++ +  I + P+ L E +TK+RLTCLA      S +K 
Sbjct: 246 SFEREGQHVIVTASSDGYIKVWNLDLNKINNVPSLLCEVSTKARLTCLAVWLDQASEMKE 305

Query: 90  FRRPQVGKNTSDEGQGVPSATDKKK 110
                     ++E +  PSA  KKK
Sbjct: 306 NCGKAATSTEANESE-KPSAVKKKK 329

[Close]

BLAST of Lsi01G001270 vs. ExPASy Swiss-Prot
Match: Q68FJ6 (p21-activated protein kinase-interacting protein 1-like OS=Xenopus laevis OX=8355 GN=pak1ip1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04
Identity = 36/123 (29.27%), Postives = 56/123 (45.53%), Query Frame = 0


Query: 11  EAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDKPNPLAEANT 70
           +AH  RVK + V+    +        HVV S+S+DG I++W + M  ++  P+ L E +T
Sbjct: 240 KAHENRVKNLHVIELQGT--------HVVVSSSSDGYIKMWRIDMEKVQTSPSLLCEVST 299

Query: 71  KSRLTCLA------------------GSALKSFRRPQVGK---NTSDEGQGVPSATDKKK 113
            +RLTCL+                   SA+K   RP+  K    T+D+         KK+
Sbjct: 300 SARLTCLSAWLPSGVDHKEKSNTAVTASAVKDCDRPKKKKAQNETTDKEASETQVVHKKR 354

[Close]

BLAST of Lsi01G001270 vs. ExPASy Swiss-Prot
Match: Q6TNS2 (p21-activated protein kinase-interacting protein 1-like OS=Danio rerio OX=7955 GN=pak1ip1 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.2e-04
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 11  EAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDKPNPLAEANT 70
           +AH  RVK I         +F +DD  V+ +AS DG I++W + + +I + P  L + NT
Sbjct: 247 KAHENRVKAI--------ESFMKDDFCVLVTASNDGFIKLWKLNLESI-ESPTLLGQLNT 304

Query: 71  KSRLTCL 78
            +RLTCL
Sbjct: 307 TARLTCL 304

[Close]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL
Match: A0A0A0KIP0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G524070 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVVLTKNSSGAF++DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVLTKNSSGAFTDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSDEGQ VPS  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDEGQVVPSVIE 339

[Close]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL
Match: A0A6J1CZG7 (p21-activated protein kinase-interacting protein 1-like OS=Momordica charantia OX=3673 GN=LOC111015687 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAY+IEEAHAARVKGIVVLTKNSSGAFS+DDPHVVASASTDGVIR+WDVRM AIKDK
Sbjct: 235 SGKVAYSIEEAHAARVKGIVVLTKNSSGAFSDDDPHVVASASTDGVIRIWDVRM-AIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGV-PSATDKKKSAE 113
           PNPLAEANTKSRLTCLAGSALKS RRPQVGKNTSDEGQ V P+ATD  + AE
Sbjct: 295 PNPLAEANTKSRLTCLAGSALKSLRRPQVGKNTSDEGQCVPPNATDNNEMAE 345

[Close]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL
Match: A0A1S3AZ39 (p21-activated protein kinase-interacting protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484350 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVV+TKNSSGAFS+DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVMTKNSSGAFSDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSD+GQ VP+  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDKGQVVPNVME 339

[Close]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL
Match: A0A5A7UEE3 (p21-activated protein kinase-interacting protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009200 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVV+T NSSGAFS+DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVMTNNSSGAFSDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSD+GQ VP+  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDKGQVVPNVME 339

[Close]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL
Match: A0A6J1EMF6 (p21-activated protein kinase-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433896 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAY+IEEAHAARVKGIVVLTKNSSGAFS+DDPH+VASAS+DGVIRVWDVRM AIKDK
Sbjct: 235 SGKVAYSIEEAHAARVKGIVVLTKNSSGAFSDDDPHIVASASSDGVIRVWDVRM-AIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATDKKKSAE 113
           PNPLAEANTKSRLTCLAGSALKS RRPQ+GKN  +EGQ  P ATD  +SAE
Sbjct: 295 PNPLAEANTKSRLTCLAGSALKSLRRPQLGKNI-EEGQCEPKATDNNESAE 343

[Close]

BLAST of Lsi01G001270 vs. NCBI nr
Match: XP_038883873.1 (p21-activated protein kinase-interacting protein 1-like [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 4.6e-44
Identity = 97/109 (88.99%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAHAARVKGIVVLTKNSS  FS+DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHAARVKGIVVLTKNSSSTFSDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATDKKKS 111
           PNPLAEANT SRLTCLAGSALKS RR QV KNTSDEGQGV +ATDKK +
Sbjct: 295 PNPLAEANTNSRLTCLAGSALKSLRRRQVRKNTSDEGQGVLNATDKKSA 343

[Close]

BLAST of Lsi01G001270 vs. NCBI nr
Match: XP_022146476.1 (p21-activated protein kinase-interacting protein 1-like [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAY+IEEAHAARVKGIVVLTKNSSGAFS+DDPHVVASASTDGVIR+WDVRM AIKDK
Sbjct: 235 SGKVAYSIEEAHAARVKGIVVLTKNSSGAFSDDDPHVVASASTDGVIRIWDVRM-AIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGV-PSATDKKKSAE 113
           PNPLAEANTKSRLTCLAGSALKS RRPQVGKNTSDEGQ V P+ATD  + AE
Sbjct: 295 PNPLAEANTKSRLTCLAGSALKSLRRPQVGKNTSDEGQCVPPNATDNNEMAE 345

[Close]

BLAST of Lsi01G001270 vs. NCBI nr
Match: XP_004134619.1 (p21-activated protein kinase-interacting protein 1-like [Cucumis sativus] >KGN49418.1 hypothetical protein Csa_003139 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVVLTKNSSGAF++DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVLTKNSSGAFTDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSDEGQ VPS  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDEGQVVPSVIE 339

[Close]

BLAST of Lsi01G001270 vs. NCBI nr
Match: XP_008439607.1 (PREDICTED: p21-activated protein kinase-interacting protein 1-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 6.6e-43
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVV+TKNSSGAFS+DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVMTKNSSGAFSDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSD+GQ VP+  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDKGQVVPNVME 339

[Close]

BLAST of Lsi01G001270 vs. NCBI nr
Match: KAA0052526.1 (p21-activated protein kinase-interacting protein 1-like [Cucumis melo var. makuwa] >TYK13299.1 p21-activated protein kinase-interacting protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GKVAYTIEEAH ARV+GIVV+T NSSGAFS+DDPHVVASASTDGVIRVWDVRMTAIKDK
Sbjct: 235 SGKVAYTIEEAHPARVRGIVVMTNNSSGAFSDDDPHVVASASTDGVIRVWDVRMTAIKDK 294

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGKNTSDEGQGVPSATD 107
           PNPLAEANTK+RLTCLAGSALKS RRPQ GKNTSD+GQ VP+  +
Sbjct: 295 PNPLAEANTKARLTCLAGSALKSLRRPQTGKNTSDKGQVVPNVME 339

[Close]

BLAST of Lsi01G001270 vs. TAIR 10
Match: AT1G65030.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 2.6e-29
Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 2   NGKVAYTIEEAHAARVKGIVVLTKNSSGAFSEDDPHVVASASTDGVIRVWDVRMTAIKDK 61
           +GK+AY+IE+AH AR+KGIVVLT+N S   S +DP+++ SAS+DG+IRVWDVRM A K+ 
Sbjct: 243 SGKLAYSIEDAHPARIKGIVVLTRNDSDG-SLEDPYLIGSASSDGIIRVWDVRMAA-KEN 302

Query: 62  PNPLAEANTKSRLTCLAGSALKSFRRPQVGK 93
             PLAE NTKSRLTCLAGSALKS RRPQ+GK
Sbjct: 303 TKPLAETNTKSRLTCLAGSALKSMRRPQIGK 331

The following BLAST results are available for this feature:

BLAST of Lsi01G001270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZKU8	5.1e-06	36.47	p21-activated protein kinase-interacting protein 1-like OS=Gallus gallus OX=9031...	[more]
Q68FJ6	1.6e-04	29.27	p21-activated protein kinase-interacting protein 1-like OS=Xenopus laevis OX=835...	[more]
Q6TNS2	6.2e-04	38.81	p21-activated protein kinase-interacting protein 1-like OS=Danio rerio OX=7955 G...	[more]

BLAST of Lsi01G001270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIP0	6.4e-44	88.57	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A6J1CZG7	6.4e-44	88.39	p21-activated protein kinase-interacting protein 1-like OS=Momordica charantia O...	[more]
A0A1S3AZ39	3.2e-43	86.67	p21-activated protein kinase-interacting protein 1-like OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UEE3	1.2e-42	85.71	p21-activated protein kinase-interacting protein 1-like OS=Cucumis melo var. mak...	[more]
A0A6J1EMF6	2.3e-41	84.68	p21-activated protein kinase-interacting protein 1-like OS=Cucurbita moschata OX...	[more]

BLAST of Lsi01G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883873.1	4.6e-44	88.99	p21-activated protein kinase-interacting protein 1-like [Benincasa hispida]	[more]
XP_022146476.1	1.3e-43	88.39	p21-activated protein kinase-interacting protein 1-like [Momordica charantia]	[more]
XP_004134619.1	1.3e-43	88.57	p21-activated protein kinase-interacting protein 1-like [Cucumis sativus] >KGN49...	[more]
XP_008439607.1	6.6e-43	86.67	PREDICTED: p21-activated protein kinase-interacting protein 1-like [Cucumis melo...	[more]
KAA0052526.1	2.5e-42	85.71	p21-activated protein kinase-interacting protein 1-like [Cucumis melo var. makuw...	[more]

BLAST of Lsi01G001270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65030.1	2.6e-29	69.23	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 2..52 e-value: 3.0E-4 score: 30.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 35..54 score: 9.238559
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 13..85 e-value: 1.8E-8 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101
None	No IPR available	PANTHER	PTHR44675	PAK1 INTERACTING PROTEIN 1	coord: 2..108
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 39..53
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 27..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G001270.1	Lsi01G001270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding