Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGTGCTAGGCTACGGGCTAGACAAAAGGAACGGCTTGCTAAAAGAAACGCATTGGAAGAATCCTTCTCTCGTGAGGGAGTGACTCTACGTGGGTCACTCCCTCATCCTCAGTGTCCTCACACCAACGCAGCAGATCCAGATCAAGCAGCAGGATCATTGGAAACGAATAAAGAGAGGACTTCAGTATTCTTCTTGGAGGATGACAAACTTGTTCATTTGCCAGATGCTCCAAAGAGCCGGATCGATTCAACCTTGAGGCTGGGAAGAATTTCAAGGCATAAAATTACCAATAATTTAGATCTCGCTGTAGGTCCAATAGGTTATTCGGCTGCTGATAATTGTCTACCAAGTCAACATTTTGTGGGTTCCAATGCTGCAAACTCAGTCCCAATCAACTTGTTACCGGTTCTTGGACTTTGTGCCCCTAATGCTAATCAGCTTGAGACATCACGTAAGAACTTGTCAAGATCAAATGGTAAGCAGATCCGAACAGGAGCTGGACCTGATTTTCCATTTAAATTATCTCCTTGCTCTGGAACTTTAAGTGGCACTGATATTGGTGGTGCTGAGGCTGTGCCAGACAAGGAATTGCCAGCTTCGTCAGCAGAACGCTTGCACAGCCATCTTTTATTTGCCCAGGTAAATTTTCCATCGTCTAGATGGCTTTCTCTGTTAACTATACTTCAGATTTTCTTGATATTCAATGTCTTATCTCTGGTTTACAGGAAAAGACGACACCACCTAATTTTCCCTTCGATGAGAAATTGCTGCCCAGATATCCAATCCCATCTAAGAACTTGGCAAGTGCACGGCTTGACTTCTTATCAAATTTGTCCCTGGATAGCAGAGTTGAAGCTGTTAATGGTTGTCTTCCAACTATACCTTTGCTGCCCAATTTAAAACTTCCTTCCCTAGATGTTATGAGGGGCAATGCACAAGATGAGGAGGAGGCTCCCTCCTTGGGTTTGGGACGGATGCTCCCCACATTCTCGGCGTTTCCTGAGAATCATAGGAAGGTGCTTGAAAACATAATGATGAGGACTGGATCTGGATCTGCCAACTACTTCAGAAGAAAACCAAAAGGAGATGGTTGGTCAGAAGATGAACTTGATTTTCTCTGGATTGGTGTTCGTAGGCATGGAAAGGGAAACTGGGACCCCATGCTTAAAGATCCTAGACTGAAATTCTCAAGGTACAAAACTTCAGAAGATTTATCATCCAGGTGGGAGGAGGAGCAACTAAAGATTTTGGATGGGTCAGCTTGTCAGATGCCAAAATCATCTAAGCAGAGCAGGTTACAGAAATCTTCTCCATTTCCAAGTCTCCCTGATGGGATGATGACACGAGCTCTGCATGGAAGTAGACTAGTTACAGGACCAAAGTTTCATACTCATCTAACAGATATTAAACTGGGTCTTGGTGATCTCGTTCCTAACCTTCCTCGATTTGAAGCATCAGATCGACTTGGTCTGCAAAATGAGCAATTTGCAACTATACCAACCTGGAACCATGACAAATATCACACGTATTTTCCAGGAGAATCATCGGCAGGAGCTTCTGATAGATCAGGGACTAATTCAACCATGCCTGTGGATAACCCTTTTATGTTCAATTCTTTGGGAACTAGTCACTTAGGTTCTTTGGGTGTAAATGGCTCTCGTGCCTTTGATACACAGGGAAAGGAGAATGACGAACCTGGTCTTGATAGCTATGGGAAGTTGCCTAATCTGTTGGATAGATCTTTGAAACTATTTCATGAATCACCTAGCAGTTTGGAAAATGGTTCAGGACTGCTGCCTGATCCCAGTAAAGGGCTCAGTGTAGCAAATTCCAAAGATGAAGTAACGGATAGCAATTCTTCAAAGGACAAACTACCTCATTGGCTAAGGGAAGCTGTAAATGTTTCTTCAAAGCCTCCAGACCCTAACCTGCCTCCTACTGTGTCAGCTGTTGCACAATCAGTTCGCTTGCTGTATGGGGAAGACAAGTTTATTACTATTCCCCCATTTGTGAACCCAGGTCCACCTCCCTCTTTACCCAAGGATCCAAGACGGAGTCTAAAGAAGAAACGAAAACGGAAATCCGTTATTTTCAGGCACTCTTCAGCAGATGTTGTAGGAAGCAGCAGCCAGCAGGAGGAGCTTGAAGGTGGCCCTGCCCATGGAGATGCCACTGTTTCTTGCTCCATCTCATTGGTCTCACCACATGCCATGCATCATCCACAGCCACAGGAAATGGCAGGAACTTCAGCTTCAAGGCTTCCAGGTCTGGAATCTGACCTTAGCATACCTTCTCTGAACTTGAACATGAATCCATCATCCTCATCTCTGCACACGAACCAGCAGAAGAAAACAAGCATGGGCTTATCCCCATCGCCAGAAGTTCTTCAGTTAGTTGCGTCTTGTGTCGCTCCTGGTTCACATATGTCATCTATATCGGGGAAGTTGAACTCAAGTATCCTTGAAAAGACGCTCCCACCATCAACTTCCCATGATCCAGAGGAGGATCTATTGGGTTCTAAAGGTTCGCCAGGAAAAGGTAAAAAACAGAGGTTATCATTCAGTTCATTAGATTTCTACAATCAAGAAAAACCCGATTCCCTCGAAAGCGATGACTCGAGTAAGACACAATCAGACCCCTCACGGAGCAAAAGACCTGATGGGGAAGAAATATCATCTGAAGGGACCGTTTCGGATCGTCATGCAAGTGACCAAGAATTATAGTTGTAATAAGAACCTGTAACAGTATAGTCATTTTTTAGTGCTGCGCGAGGCTGTATGTCAATGTGCTTGAATTTTTGTAGGCATTCCCCAATGAGTTAAGGGCATTGGTAAATGTAGGCTTATTAGTAGCATATCTTGTGTAAAGCTTTCTTCAAGAGAAATGTCAAATATAGTTCTCTCTTTTGGTATTCACTCCACGTTCTGTTGTCTGATCCATATTTGATTATTGGTCACAAGTTTGAGAGAAGATGTGTTAAAAGTAAAACATATTCATACATTCAGCTGAACCAAAAGCACTTGTACTTCGTTGAGTCTGTGTAAATTTGTAGCCTTAGGCAAAGCATTTACTCAAAAGCTATAATGTAAATCTTCTTCATTTGGTTTTTCTTTTTAACTCTTGCCTTAT
mRNA sequence
ATGAACAGTGCTAGGCTACGGGCTAGACAAAAGGAACGGCTTGCTAAAAGAAACGCATTGGAAGAATCCTTCTCTCGTGAGGGAGTGACTCTACGTGGGTCACTCCCTCATCCTCAGTGTCCTCACACCAACGCAGCAGATCCAGATCAAGCAGCAGGATCATTGGAAACGAATAAAGAGAGGACTTCAGTATTCTTCTTGGAGGATGACAAACTTGTTCATTTGCCAGATGCTCCAAAGAGCCGGATCGATTCAACCTTGAGGCTGGGAAGAATTTCAAGGCATAAAATTACCAATAATTTAGATCTCGCTGTAGGTCCAATAGGTTATTCGGCTGCTGATAATTGTCTACCAAGTCAACATTTTGTGGGTTCCAATGCTGCAAACTCAGTCCCAATCAACTTGTTACCGGTTCTTGGACTTTGTGCCCCTAATGCTAATCAGCTTGAGACATCACGTAAGAACTTGTCAAGATCAAATGGTAAGCAGATCCGAACAGGAGCTGGACCTGATTTTCCATTTAAATTATCTCCTTGCTCTGGAACTTTAAGTGGCACTGATATTGGTGGTGCTGAGGCTGTGCCAGACAAGGAATTGCCAGCTTCGTCAGCAGAACGCTTGCACAGCCATCTTTTATTTGCCCAGGAAAAGACGACACCACCTAATTTTCCCTTCGATGAGAAATTGCTGCCCAGATATCCAATCCCATCTAAGAACTTGGCAAGTGCACGGCTTGACTTCTTATCAAATTTGTCCCTGGATAGCAGAGTTGAAGCTGTTAATGGTTGTCTTCCAACTATACCTTTGCTGCCCAATTTAAAACTTCCTTCCCTAGATGTTATGAGGGGCAATGCACAAGATGAGGAGGAGGCTCCCTCCTTGGGTTTGGGACGGATGCTCCCCACATTCTCGGCGTTTCCTGAGAATCATAGGAAGGTGCTTGAAAACATAATGATGAGGACTGGATCTGGATCTGCCAACTACTTCAGAAGAAAACCAAAAGGAGATGGTTGGTCAGAAGATGAACTTGATTTTCTCTGGATTGGTGTTCGTAGGCATGGAAAGGGAAACTGGGACCCCATGCTTAAAGATCCTAGACTGAAATTCTCAAGGTACAAAACTTCAGAAGATTTATCATCCAGGTGGGAGGAGGAGCAACTAAAGATTTTGGATGGGTCAGCTTGTCAGATGCCAAAATCATCTAAGCAGAGCAGGTTACAGAAATCTTCTCCATTTCCAAGTCTCCCTGATGGGATGATGACACGAGCTCTGCATGGAAGTAGACTAGTTACAGGACCAAAGTTTCATACTCATCTAACAGATATTAAACTGGGTCTTGGTGATCTCGTTCCTAACCTTCCTCGATTTGAAGCATCAGATCGACTTGGTCTGCAAAATGAGCAATTTGCAACTATACCAACCTGGAACCATGACAAATATCACACGTATTTTCCAGGAGAATCATCGGCAGGAGCTTCTGATAGATCAGGGACTAATTCAACCATGCCTGTGGATAACCCTTTTATGTTCAATTCTTTGGGAACTAGTCACTTAGGTTCTTTGGGTGTAAATGGCTCTCGTGCCTTTGATACACAGGGAAAGGAGAATGACGAACCTGGTCTTGATAGCTATGGGAAGTTGCCTAATCTGTTGGATAGATCTTTGAAACTATTTCATGAATCACCTAGCAGTTTGGAAAATGGTTCAGGACTGCTGCCTGATCCCAGTAAAGGGCTCAGTGTAGCAAATTCCAAAGATGAAGTAACGGATAGCAATTCTTCAAAGGACAAACTACCTCATTGGCTAAGGGAAGCTGTAAATGTTTCTTCAAAGCCTCCAGACCCTAACCTGCCTCCTACTGTGTCAGCTGTTGCACAATCAGTTCGCTTGCTGTATGGGGAAGACAAGTTTATTACTATTCCCCCATTTGTGAACCCAGGTCCACCTCCCTCTTTACCCAAGGATCCAAGACGGAGTCTAAAGAAGAAACGAAAACGGAAATCCGTTATTTTCAGGCACTCTTCAGCAGATGTTGTAGGAAGCAGCAGCCAGCAGGAGGAGCTTGAAGGTGGCCCTGCCCATGGAGATGCCACTGTTTCTTGCTCCATCTCATTGGTCTCACCACATGCCATGCATCATCCACAGCCACAGGAAATGGCAGGAACTTCAGCTTCAAGGCTTCCAGGTCTGGAATCTGACCTTAGCATACCTTCTCTGAACTTGAACATGAATCCATCATCCTCATCTCTGCACACGAACCAGCAGAAGAAAACAAGCATGGGCTTATCCCCATCGCCAGAAGTTCTTCAGTTAGTTGCGTCTTGTGTCGCTCCTGGTTCACATATGTCATCTATATCGGGGAAGTTGAACTCAAGTATCCTTGAAAAGACGCTCCCACCATCAACTTCCCATGATCCAGAGGAGGATCTATTGGGTTCTAAAGGTTCGCCAGGAAAAGGTAAAAAACAGAGGTTATCATTCAGTTCATTAGATTTCTACAATCAAGAAAAACCCGATTCCCTCGAAAGCGATGACTCGAGTAAGACACAATCAGACCCCTCACGGAGCAAAAGACCTGATGGGGAAGAAATATCATCTGAAGGGACCGTTTCGGATCGTCATGCAAGTGACCAAGAATTATAGTTGTAATAAGAACCTGTAACAGTATAGTCATTTTTTAGTGCTGCGCGAGGCTGTATGTCAATGTGCTTGAATTTTTGTAGGCATTCCCCAATGAGTTAAGGGCATTGGTAAATGTAGGCTTATTAGTAGCATATCTTGTGTAAAGCTTTCTTCAAGAGAAATGTCAAATATAGTTCTCTCTTTTGGTATTCACTCCACGTTCTGTTGTCTGATCCATATTTGATTATTGGTCACAAGTTTGAGAGAAGATGTGTTAAAAGTAAAACATATTCATACATTCAGCTGAACCAAAAGCACTTGTACTTCGTTGAGTCTGTGTAAATTTGTAGCCTTAGGCAAAGCATTTACTCAAAAGCTATAATGTAAATCTTCTTCATTTGGTTTTTCTTTTTAACTCTTGCCTTAT
Coding sequence (CDS)
ATGAACAGTGCTAGGCTACGGGCTAGACAAAAGGAACGGCTTGCTAAAAGAAACGCATTGGAAGAATCCTTCTCTCGTGAGGGAGTGACTCTACGTGGGTCACTCCCTCATCCTCAGTGTCCTCACACCAACGCAGCAGATCCAGATCAAGCAGCAGGATCATTGGAAACGAATAAAGAGAGGACTTCAGTATTCTTCTTGGAGGATGACAAACTTGTTCATTTGCCAGATGCTCCAAAGAGCCGGATCGATTCAACCTTGAGGCTGGGAAGAATTTCAAGGCATAAAATTACCAATAATTTAGATCTCGCTGTAGGTCCAATAGGTTATTCGGCTGCTGATAATTGTCTACCAAGTCAACATTTTGTGGGTTCCAATGCTGCAAACTCAGTCCCAATCAACTTGTTACCGGTTCTTGGACTTTGTGCCCCTAATGCTAATCAGCTTGAGACATCACGTAAGAACTTGTCAAGATCAAATGGTAAGCAGATCCGAACAGGAGCTGGACCTGATTTTCCATTTAAATTATCTCCTTGCTCTGGAACTTTAAGTGGCACTGATATTGGTGGTGCTGAGGCTGTGCCAGACAAGGAATTGCCAGCTTCGTCAGCAGAACGCTTGCACAGCCATCTTTTATTTGCCCAGGAAAAGACGACACCACCTAATTTTCCCTTCGATGAGAAATTGCTGCCCAGATATCCAATCCCATCTAAGAACTTGGCAAGTGCACGGCTTGACTTCTTATCAAATTTGTCCCTGGATAGCAGAGTTGAAGCTGTTAATGGTTGTCTTCCAACTATACCTTTGCTGCCCAATTTAAAACTTCCTTCCCTAGATGTTATGAGGGGCAATGCACAAGATGAGGAGGAGGCTCCCTCCTTGGGTTTGGGACGGATGCTCCCCACATTCTCGGCGTTTCCTGAGAATCATAGGAAGGTGCTTGAAAACATAATGATGAGGACTGGATCTGGATCTGCCAACTACTTCAGAAGAAAACCAAAAGGAGATGGTTGGTCAGAAGATGAACTTGATTTTCTCTGGATTGGTGTTCGTAGGCATGGAAAGGGAAACTGGGACCCCATGCTTAAAGATCCTAGACTGAAATTCTCAAGGTACAAAACTTCAGAAGATTTATCATCCAGGTGGGAGGAGGAGCAACTAAAGATTTTGGATGGGTCAGCTTGTCAGATGCCAAAATCATCTAAGCAGAGCAGGTTACAGAAATCTTCTCCATTTCCAAGTCTCCCTGATGGGATGATGACACGAGCTCTGCATGGAAGTAGACTAGTTACAGGACCAAAGTTTCATACTCATCTAACAGATATTAAACTGGGTCTTGGTGATCTCGTTCCTAACCTTCCTCGATTTGAAGCATCAGATCGACTTGGTCTGCAAAATGAGCAATTTGCAACTATACCAACCTGGAACCATGACAAATATCACACGTATTTTCCAGGAGAATCATCGGCAGGAGCTTCTGATAGATCAGGGACTAATTCAACCATGCCTGTGGATAACCCTTTTATGTTCAATTCTTTGGGAACTAGTCACTTAGGTTCTTTGGGTGTAAATGGCTCTCGTGCCTTTGATACACAGGGAAAGGAGAATGACGAACCTGGTCTTGATAGCTATGGGAAGTTGCCTAATCTGTTGGATAGATCTTTGAAACTATTTCATGAATCACCTAGCAGTTTGGAAAATGGTTCAGGACTGCTGCCTGATCCCAGTAAAGGGCTCAGTGTAGCAAATTCCAAAGATGAAGTAACGGATAGCAATTCTTCAAAGGACAAACTACCTCATTGGCTAAGGGAAGCTGTAAATGTTTCTTCAAAGCCTCCAGACCCTAACCTGCCTCCTACTGTGTCAGCTGTTGCACAATCAGTTCGCTTGCTGTATGGGGAAGACAAGTTTATTACTATTCCCCCATTTGTGAACCCAGGTCCACCTCCCTCTTTACCCAAGGATCCAAGACGGAGTCTAAAGAAGAAACGAAAACGGAAATCCGTTATTTTCAGGCACTCTTCAGCAGATGTTGTAGGAAGCAGCAGCCAGCAGGAGGAGCTTGAAGGTGGCCCTGCCCATGGAGATGCCACTGTTTCTTGCTCCATCTCATTGGTCTCACCACATGCCATGCATCATCCACAGCCACAGGAAATGGCAGGAACTTCAGCTTCAAGGCTTCCAGGTCTGGAATCTGACCTTAGCATACCTTCTCTGAACTTGAACATGAATCCATCATCCTCATCTCTGCACACGAACCAGCAGAAGAAAACAAGCATGGGCTTATCCCCATCGCCAGAAGTTCTTCAGTTAGTTGCGTCTTGTGTCGCTCCTGGTTCACATATGTCATCTATATCGGGGAAGTTGAACTCAAGTATCCTTGAAAAGACGCTCCCACCATCAACTTCCCATGATCCAGAGGAGGATCTATTGGGTTCTAAAGGTTCGCCAGGAAAAGGTAAAAAACAGAGGTTATCATTCAGTTCATTAGATTTCTACAATCAAGAAAAACCCGATTCCCTCGAAAGCGATGACTCGAGTAAGACACAATCAGACCCCTCACGGAGCAAAAGACCTGATGGGGAAGAAATATCATCTGAAGGGACCGTTTCGGATCGTCATGCAAGTGACCAAGAATTATAG
Protein sequence
MNSARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTSVFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFVGSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTLSGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASARLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTFSAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLKDPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRALHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTYFPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDSYGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLREAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKKRKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTSASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMSSISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Homology
BLAST of Lsi01G000310 vs. ExPASy Swiss-Prot
Match:
F4KBP5 (Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana OX=3702 GN=CHR4 PE=2 SV=1)
HSP 1 Score: 459.9 bits (1182), Expect = 6.4e-128
Identity = 339/917 (36.97%), Postives = 458/917 (49.95%), Query Frame = 0
Query: 5 RLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTSV 64
+LR RQK +A+RN++EE SLP + + DQ ++E +
Sbjct: 1383 KLRERQKNLIARRNSVEE-----------SLP--------SGNVDQVTEVANQDEESPTS 1442
Query: 65 FFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFVG 124
L+D K DA K + S S L SQH G
Sbjct: 1443 MDLDDSKASQQCDAQKRKASS-------------------------SDPKPDLLSQHHHG 1502
Query: 125 SNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKL-------- 184
+ S+P N LPVLGLCAPN Q E+SR+N SR +Q R GP FPF L
Sbjct: 1503 AECLPSLPPNNLPVLGLCAPNFTQSESSRRNYSRPGSRQNRPITGPHFPFNLPQTSNLVE 1562
Query: 185 ------SPCSGTLSGTDIGGAEA----------VPDKELPAS-SAERLHSH-LLFA--QE 244
P G L +I +P ++ P S ER S FA QE
Sbjct: 1563 REANDQEPPMGKLKPQNIKEEPFQQPLSNMDGWLPHRQFPPSGDFERPRSSGAAFADFQE 1622
Query: 245 KTTPPNFPFDEKLLPRYPIPSKNLASARLDFLSNLSLDSRVEAVNGCLPTI------PLL 304
K N PFD+KLLPR+P + + ++ D ++NLS+ R E + + P L
Sbjct: 1623 KFPLLNLPFDDKLLPRFPFQPRTMGTSHQDIMANLSMRKRFEGTGHSMQDLFGGTPMPFL 1682
Query: 305 PNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTFSAFPENHRKVLENIMMRTGSGSANYFR 364
PN+K+P +D N Q E++ P LGL + S+ PENHRKVLENIM+RTGSG + +
Sbjct: 1683 PNMKIPPMDPPVFN-QQEKDLPPLGLDQFPSALSSIPENHRKVLENIMLRTGSGIGHVQK 1742
Query: 365 RKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLKDPRLKFSRYKTSEDLSSRWEEEQLKIL 424
+K + D WSEDELD LWIG+RRHG GNW+ +L+DPRLKFS++KT E L++RWEEEQ K L
Sbjct: 1743 KKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDPRLKFSKFKTPEYLAARWEEEQRKFL 1802
Query: 425 DGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRALHGSRLVTGPKFHTHLTDIKLGLGDLV 484
D + KSS+ + KSS FP LP G+M RALHG + T P+F +HLTDIKLG GDL
Sbjct: 1803 DSLSSLPSKSSRTDKSTKSSLFPGLPQGIMNRALHG-KYATPPRFQSHLTDIKLGFGDLA 1862
Query: 485 PNLPRFEASDRLGLQNEQFATIPTWNHDKYHTYFPGESSAGASDRSGTNSTMPVDNPFMF 544
LP FE SD LG ++E F + D PGE SAG S+R+GT++ +P + PF
Sbjct: 1863 SPLPLFEPSDHLGFRSEHFPPMANLCTDN----LPGEPSAGPSERAGTSTNIPNEKPFPL 1922
Query: 545 NSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDSYGKLPNLLDRSLKLFHESPSSLENGSG 604
NSLG +LGSLG++ + +T E + GKLP LD L +S +++ G
Sbjct: 1923 NSLGMGNLGSLGLDSLSSLNTLRAEEKRDAI-KRGKLPLFLDMPLPQMLDSSNNVFLGRS 1982
Query: 605 LLPD---PSKGLSVANSKD-EVTDSNSSKDKLPHWLREAVNVSS--KPPDPNLPPTVSAV 664
P P++GL+ +N ++ +SS++KLPHWLR V V + P P LPPTVSA+
Sbjct: 1983 ANPSFLHPNRGLNPSNPMGRDIMGISSSENKLPHWLRNVVTVPTVKSPEPPTLPPTVSAI 2042
Query: 665 AQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKKRKRKSVIFRHSSADVVGSSSQ 724
AQSVR+LYGED TIPPFV P PPP P+DPR SL+KKRKRK + D+ SS
Sbjct: 2043 AQSVRVLYGEDS-TTIPPFVIPEPPPPAPRDPRHSLRKKRKRKLHSSSQKTTDIGSSSHN 2102
Query: 725 QEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTSASRLPGLESDLSIPSLNLNMN 784
E + G+ S + L P P TS S P +P NLN
Sbjct: 2103 AVE---SSSQGNPQTSATPPL--------PPPSLAGETSGSSQP------KLPPHNLNST 2162
Query: 785 PSSSSLHTNQQKKTSMGLSPSPEVLQLVASC--VAPGSHMSSISGKLNSSILEKTLPPST 844
SS + P PE ++A+ APG + I+G S LE
Sbjct: 2163 EPLSS---------EAIIIPPPEEDSVIAAAPSEAPGPSLEGITGTTKSISLE------- 2206
Query: 845 SHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLESDDSSKTQSDPSRSKRPDGE 880
S E + + G +++ ++ EK + ES+++ Q +P
Sbjct: 2223 SQSSEPETINQDGDLDPETDEKVESERTPLHSDEKQEEQESENALNKQCEPI-------- 2206
BLAST of Lsi01G000310 vs. ExPASy TrEMBL
Match:
A0A0A0KJ30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526520 PE=4 SV=1)
HSP 1 Score: 1615.5 bits (4182), Expect = 0.0e+00
Identity = 814/877 (92.82%), Postives = 845/877 (96.35%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
++LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAA PDQAAGSLETNKERTS
Sbjct: 1456 SKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAAGPDQAAGSLETNKERTS 1515
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGR+SRHK++NNLDLAVGPIGY ADNCLPSQHF
Sbjct: 1516 VFVLEDDKLVHSADAPKSRIDSTLRLGRMSRHKVSNNLDLAVGPIGYLPADNCLPSQHFA 1575
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRSNGKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1576 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSNGKQSRTVAGPDFPFKLSPCSGTI 1635
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELPASSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1636 SGTDIGGGEPVPDKELPASSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1695
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1696 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1755
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1756 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1815
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQMPKS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1816 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSAKQSRLQKSSPFPSLPDGMMTRA 1875
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1876 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1935
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG NSTMP++NPFMFNSLGTSHL SLG+NGSR FDTQGKENDEPGLD+
Sbjct: 1936 FPGESSAGASDRSGANSTMPIENPFMFNSLGTSHLVSLGLNGSRGFDTQGKENDEPGLDN 1995
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 1996 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 2055
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2056 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2115
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG +H DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2116 RKRKSVIFRHSSADVVGSSSQQEELEGGSSHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2175
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPGLESDLSIP+LNLNMNP SSSL TN QKKT+MGLSPSPEVLQLVASCVAPGS++S
Sbjct: 2176 TSRLPGLESDLSIPALNLNMNPPSSSLQTN-QKKTNMGLSPSPEVLQLVASCVAPGSNLS 2235
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSILEKTLP STSHDP EDLLGSKGSPGKGKKQRLSFSSLDFYNQ+KPDSLES
Sbjct: 2236 SISGKLNSSILEKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSLDFYNQDKPDSLES 2295
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Sbjct: 2296 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 2330
BLAST of Lsi01G000310 vs. ExPASy TrEMBL
Match:
A0A5A7UAM7 (Protein CHROMATIN REMODELING 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00310 PE=4 SV=1)
HSP 1 Score: 1605.9 bits (4157), Expect = 0.0e+00
Identity = 811/877 (92.47%), Postives = 842/877 (96.01%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAADPDQAA SLETNKERTS
Sbjct: 1453 AKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAADPDQAAASLETNKERTS 1512
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGRISRHK++NNLDLAVGPIGYS ADNCLPSQHF
Sbjct: 1513 VFVLEDDKLVHSADAPKSRIDSTLRLGRISRHKVSNNLDLAVGPIGYSPADNCLPSQHFA 1572
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRSNGKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1573 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSNGKQSRTVAGPDFPFKLSPCSGTI 1632
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELP+SSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1633 SGTDIGGGEPVPDKELPSSSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1692
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNL+LPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1693 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLQLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1752
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1753 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1812
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQM KS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1813 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMLKSAKQSRLQKSSPFPSLPDGMMTRA 1872
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQN+QFATIPTWNHDKYHTY
Sbjct: 1873 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNDQFATIPTWNHDKYHTY 1932
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG +STMPV+NPFMFNSLGTSHLGSLG+NGSR FDTQGKENDEPGLD
Sbjct: 1933 FPGESSAGASDRSGPSSTMPVENPFMFNSLGTSHLGSLGLNGSRGFDTQGKENDEPGLDD 1992
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+E TDSNSSKDKLPHWLR
Sbjct: 1993 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEATDSNSSKDKLPHWLR 2052
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2053 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2112
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG AH DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2113 RKRKSVIFRHSSADVVGSSSQQEELEGGSAHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2172
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPG ESDLSIP+LNLNMNPSSSSLHTN QKKT+MGLSPSPEVLQLVASCVAP S++S
Sbjct: 2173 TSRLPGPESDLSIPALNLNMNPSSSSLHTN-QKKTNMGLSPSPEVLQLVASCVAPCSNLS 2232
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSIL+KTLP STSHDP EDLLGSKGSPGKGKKQRLSFSS DFYNQ+KPDSLES
Sbjct: 2233 SISGKLNSSILDKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSSDFYNQDKPDSLES 2292
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDR ASDQEL
Sbjct: 2293 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQEL 2327
BLAST of Lsi01G000310 vs. ExPASy TrEMBL
Match:
A0A1S3AZG8 (protein CHROMATIN REMODELING 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484261 PE=4 SV=1)
HSP 1 Score: 1601.6 bits (4146), Expect = 0.0e+00
Identity = 812/879 (92.38%), Postives = 843/879 (95.90%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAADPDQAA SLETNKERTS
Sbjct: 1453 AKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAADPDQAAASLETNKERTS 1512
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGRISRHK++NNLDLAVGPIGYS ADNCLPSQHF
Sbjct: 1513 VFVLEDDKLVHSADAPKSRIDSTLRLGRISRHKVSNNLDLAVGPIGYSPADNCLPSQHFA 1572
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRS+GKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1573 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSSGKQSRTVAGPDFPFKLSPCSGTI 1632
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELP+SSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1633 SGTDIGGGEPVPDKELPSSSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1692
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNL+LPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1693 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLQLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1752
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1753 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1812
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQM KS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1813 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMLKSAKQSRLQKSSPFPSLPDGMMTRA 1872
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1873 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1932
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG +STMPV+NPFMFNSLGTSHLGSLG+NGSR FDTQGKENDEPGLD
Sbjct: 1933 FPGESSAGASDRSGPSSTMPVENPFMFNSLGTSHLGSLGLNGSRGFDTQGKENDEPGLDD 1992
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 1993 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 2052
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2053 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2112
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG AH DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2113 RKRKSVIFRHSSADVVGSSSQQEELEGGSAHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2172
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPG ESDLSIP+LNLNMNPSSSSLHTN QKKT+MGLSPSPEVLQLVASCVAP S++S
Sbjct: 2173 TSRLPGPESDLSIPALNLNMNPSSSSLHTN-QKKTNMGLSPSPEVLQLVASCVAPCSNLS 2232
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEK--PDSL 843
SISGKLNSSIL+KTLP STSHDP EDLLGSKGSPGKGKKQRLSFSS DFYNQ+K PDSL
Sbjct: 2233 SISGKLNSSILDKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSSDFYNQDKPEPDSL 2292
Query: 844 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDR ASDQEL
Sbjct: 2293 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQEL 2329
BLAST of Lsi01G000310 vs. ExPASy TrEMBL
Match:
E5GCL1 (Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 1601.6 bits (4146), Expect = 0.0e+00
Identity = 812/879 (92.38%), Postives = 843/879 (95.90%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAADPDQAA SLETNKERTS
Sbjct: 1498 AKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAADPDQAAASLETNKERTS 1557
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGRISRHK++NNLDLAVGPIGYS ADNCLPSQHF
Sbjct: 1558 VFVLEDDKLVHSADAPKSRIDSTLRLGRISRHKVSNNLDLAVGPIGYSPADNCLPSQHFA 1617
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRS+GKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1618 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSSGKQSRTVAGPDFPFKLSPCSGTI 1677
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELP+SSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1678 SGTDIGGGEPVPDKELPSSSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1737
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNL+LPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1738 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLQLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1797
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1798 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1857
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQM KS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1858 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMLKSAKQSRLQKSSPFPSLPDGMMTRA 1917
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1918 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1977
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG +STMPV+NPFMFNSLGTSHLGSLG+NGSR FDTQGKENDEPGLD
Sbjct: 1978 FPGESSAGASDRSGPSSTMPVENPFMFNSLGTSHLGSLGLNGSRGFDTQGKENDEPGLDD 2037
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 2038 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 2097
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2098 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2157
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG AH DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2158 RKRKSVIFRHSSADVVGSSSQQEELEGGSAHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2217
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPG ESDLSIP+LNLNMNPSSSSLHTN QKKT+MGLSPSPEVLQLVASCVAP S++S
Sbjct: 2218 TSRLPGPESDLSIPALNLNMNPSSSSLHTN-QKKTNMGLSPSPEVLQLVASCVAPCSNLS 2277
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEK--PDSL 843
SISGKLNSSIL+KTLP STSHDP EDLLGSKGSPGKGKKQRLSFSS DFYNQ+K PDSL
Sbjct: 2278 SISGKLNSSILDKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSSDFYNQDKPEPDSL 2337
Query: 844 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDR ASDQEL
Sbjct: 2338 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQEL 2374
BLAST of Lsi01G000310 vs. ExPASy TrEMBL
Match:
A0A1S3AYF1 (protein CHROMATIN REMODELING 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484261 PE=4 SV=1)
HSP 1 Score: 1601.6 bits (4146), Expect = 0.0e+00
Identity = 812/879 (92.38%), Postives = 843/879 (95.90%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAADPDQAA SLETNKERTS
Sbjct: 1343 AKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAADPDQAAASLETNKERTS 1402
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGRISRHK++NNLDLAVGPIGYS ADNCLPSQHF
Sbjct: 1403 VFVLEDDKLVHSADAPKSRIDSTLRLGRISRHKVSNNLDLAVGPIGYSPADNCLPSQHFA 1462
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRS+GKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1463 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSSGKQSRTVAGPDFPFKLSPCSGTI 1522
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELP+SSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1523 SGTDIGGGEPVPDKELPSSSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1582
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNL+LPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1583 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLQLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1642
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1643 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1702
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQM KS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1703 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMLKSAKQSRLQKSSPFPSLPDGMMTRA 1762
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1763 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1822
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG +STMPV+NPFMFNSLGTSHLGSLG+NGSR FDTQGKENDEPGLD
Sbjct: 1823 FPGESSAGASDRSGPSSTMPVENPFMFNSLGTSHLGSLGLNGSRGFDTQGKENDEPGLDD 1882
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 1883 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 1942
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 1943 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2002
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG AH DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2003 RKRKSVIFRHSSADVVGSSSQQEELEGGSAHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2062
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPG ESDLSIP+LNLNMNPSSSSLHTN QKKT+MGLSPSPEVLQLVASCVAP S++S
Sbjct: 2063 TSRLPGPESDLSIPALNLNMNPSSSSLHTN-QKKTNMGLSPSPEVLQLVASCVAPCSNLS 2122
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEK--PDSL 843
SISGKLNSSIL+KTLP STSHDP EDLLGSKGSPGKGKKQRLSFSS DFYNQ+K PDSL
Sbjct: 2123 SISGKLNSSILDKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSSDFYNQDKPEPDSL 2182
Query: 844 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDR ASDQEL
Sbjct: 2183 ESDDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQEL 2219
BLAST of Lsi01G000310 vs. NCBI nr
Match:
XP_038881449.1 (protein CHROMATIN REMODELING 4 isoform X1 [Benincasa hispida] >XP_038881450.1 protein CHROMATIN REMODELING 4 isoform X1 [Benincasa hispida] >XP_038881452.1 protein CHROMATIN REMODELING 4 isoform X1 [Benincasa hispida])
HSP 1 Score: 1628.2 bits (4215), Expect = 0.0e+00
Identity = 824/877 (93.96%), Postives = 845/877 (96.35%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVT+ GSLPH QCPHTNA D DQAAGSLETNKERTS
Sbjct: 1458 AKLRARQKERLAKRNALEESFSREGVTIHGSLPH-QCPHTNAVDQDQAAGSLETNKERTS 1517
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKL+ DAPKSRIDSTLRLGRISRHKI+NNLDLAVGPIGYSAADN LPSQHF
Sbjct: 1518 VFVLEDDKLIQSADAPKSRIDSTLRLGRISRHKISNNLDLAVGPIGYSAADNFLPSQHFA 1577
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
GS+ ANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQ RT AGPDFPFKLSPCSGTL
Sbjct: 1578 GSSHANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQSRTVAGPDFPFKLSPCSGTL 1637
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTD+GGAE VPDKELPASSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL S
Sbjct: 1638 SGTDVGGAEVVPDKELPASSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLPSG 1697
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLD RVEAVNGCLPTIPLLPNLKLPSLDVMRGN QDEEEAPSLGLGRMLPTF
Sbjct: 1698 RLDFLSNLSLDGRVEAVNGCLPTIPLLPNLKLPSLDVMRGNPQDEEEAPSLGLGRMLPTF 1757
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1758 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1817
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1818 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSAKQSRLQKSSPFPSLPDGMMTRA 1877
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLVT PKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFA+IPTWNHDKYHTY
Sbjct: 1878 LHGSRLVTVPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFASIPTWNHDKYHTY 1937
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLG+NGS +FDTQGKENDEPGLD+
Sbjct: 1938 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGLNGSSSFDTQGKENDEPGLDN 1997
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LENGSGLLPDPSKGLSVAN KDE+TD NSSKDKLPHWLR
Sbjct: 1998 YGKLPNLLDRSLKLFHESPSNLENGSGLLPDPSKGLSVANPKDELTDGNSSKDKLPHWLR 2057
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNV+SKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2058 EAVNVTSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2117
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDA VSCSISLVSPHA+HH QPQEMAGTS
Sbjct: 2118 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDAAVSCSISLVSPHAIHHSQPQEMAGTS 2177
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKT+MGLSPSPEVLQLVASCVAPGSHMS
Sbjct: 2178 TSRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTTMGLSPSPEVLQLVASCVAPGSHMS 2237
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSILEKT+P STSHD +ED+L SK SPGKGKKQRLSFSSLDFYNQ+KP SLES
Sbjct: 2238 SISGKLNSSILEKTIPLSTSHD-QEDILSSKSSPGKGKKQRLSFSSLDFYNQDKPKSLES 2297
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Sbjct: 2298 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 2332
BLAST of Lsi01G000310 vs. NCBI nr
Match:
XP_038881453.1 (protein CHROMATIN REMODELING 4 isoform X2 [Benincasa hispida])
HSP 1 Score: 1628.2 bits (4215), Expect = 0.0e+00
Identity = 824/877 (93.96%), Postives = 845/877 (96.35%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVT+ GSLPH QCPHTNA D DQAAGSLETNKERTS
Sbjct: 1457 AKLRARQKERLAKRNALEESFSREGVTIHGSLPH-QCPHTNAVDQDQAAGSLETNKERTS 1516
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKL+ DAPKSRIDSTLRLGRISRHKI+NNLDLAVGPIGYSAADN LPSQHF
Sbjct: 1517 VFVLEDDKLIQSADAPKSRIDSTLRLGRISRHKISNNLDLAVGPIGYSAADNFLPSQHFA 1576
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
GS+ ANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQ RT AGPDFPFKLSPCSGTL
Sbjct: 1577 GSSHANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQSRTVAGPDFPFKLSPCSGTL 1636
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTD+GGAE VPDKELPASSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL S
Sbjct: 1637 SGTDVGGAEVVPDKELPASSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLPSG 1696
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLD RVEAVNGCLPTIPLLPNLKLPSLDVMRGN QDEEEAPSLGLGRMLPTF
Sbjct: 1697 RLDFLSNLSLDGRVEAVNGCLPTIPLLPNLKLPSLDVMRGNPQDEEEAPSLGLGRMLPTF 1756
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1757 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1816
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1817 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSAKQSRLQKSSPFPSLPDGMMTRA 1876
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLVT PKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFA+IPTWNHDKYHTY
Sbjct: 1877 LHGSRLVTVPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFASIPTWNHDKYHTY 1936
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLG+NGS +FDTQGKENDEPGLD+
Sbjct: 1937 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGLNGSSSFDTQGKENDEPGLDN 1996
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LENGSGLLPDPSKGLSVAN KDE+TD NSSKDKLPHWLR
Sbjct: 1997 YGKLPNLLDRSLKLFHESPSNLENGSGLLPDPSKGLSVANPKDELTDGNSSKDKLPHWLR 2056
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNV+SKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2057 EAVNVTSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2116
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDA VSCSISLVSPHA+HH QPQEMAGTS
Sbjct: 2117 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDAAVSCSISLVSPHAIHHSQPQEMAGTS 2176
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKT+MGLSPSPEVLQLVASCVAPGSHMS
Sbjct: 2177 TSRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTTMGLSPSPEVLQLVASCVAPGSHMS 2236
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSILEKT+P STSHD +ED+L SK SPGKGKKQRLSFSSLDFYNQ+KP SLES
Sbjct: 2237 SISGKLNSSILEKTIPLSTSHD-QEDILSSKSSPGKGKKQRLSFSSLDFYNQDKPKSLES 2296
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Sbjct: 2297 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 2331
BLAST of Lsi01G000310 vs. NCBI nr
Match:
XP_011658345.1 (protein CHROMATIN REMODELING 4 isoform X1 [Cucumis sativus] >XP_011658346.1 protein CHROMATIN REMODELING 4 isoform X1 [Cucumis sativus] >KGN49518.1 hypothetical protein Csa_003730 [Cucumis sativus])
HSP 1 Score: 1615.5 bits (4182), Expect = 0.0e+00
Identity = 814/877 (92.82%), Postives = 845/877 (96.35%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
++LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAA PDQAAGSLETNKERTS
Sbjct: 1456 SKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAAGPDQAAGSLETNKERTS 1515
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGR+SRHK++NNLDLAVGPIGY ADNCLPSQHF
Sbjct: 1516 VFVLEDDKLVHSADAPKSRIDSTLRLGRMSRHKVSNNLDLAVGPIGYLPADNCLPSQHFA 1575
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRSNGKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1576 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSNGKQSRTVAGPDFPFKLSPCSGTI 1635
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELPASSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1636 SGTDIGGGEPVPDKELPASSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1695
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1696 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1755
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1756 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1815
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQMPKS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1816 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSAKQSRLQKSSPFPSLPDGMMTRA 1875
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1876 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1935
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG NSTMP++NPFMFNSLGTSHL SLG+NGSR FDTQGKENDEPGLD+
Sbjct: 1936 FPGESSAGASDRSGANSTMPIENPFMFNSLGTSHLVSLGLNGSRGFDTQGKENDEPGLDN 1995
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 1996 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 2055
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2056 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2115
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG +H DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2116 RKRKSVIFRHSSADVVGSSSQQEELEGGSSHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2175
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPGLESDLSIP+LNLNMNP SSSL TN QKKT+MGLSPSPEVLQLVASCVAPGS++S
Sbjct: 2176 TSRLPGLESDLSIPALNLNMNPPSSSLQTN-QKKTNMGLSPSPEVLQLVASCVAPGSNLS 2235
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSILEKTLP STSHDP EDLLGSKGSPGKGKKQRLSFSSLDFYNQ+KPDSLES
Sbjct: 2236 SISGKLNSSILEKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSLDFYNQDKPDSLES 2295
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Sbjct: 2296 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 2330
BLAST of Lsi01G000310 vs. NCBI nr
Match:
XP_011658348.1 (protein CHROMATIN REMODELING 4 isoform X2 [Cucumis sativus])
HSP 1 Score: 1615.5 bits (4182), Expect = 0.0e+00
Identity = 814/877 (92.82%), Postives = 845/877 (96.35%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
++LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAA PDQAAGSLETNKERTS
Sbjct: 1346 SKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAAGPDQAAGSLETNKERTS 1405
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGR+SRHK++NNLDLAVGPIGY ADNCLPSQHF
Sbjct: 1406 VFVLEDDKLVHSADAPKSRIDSTLRLGRMSRHKVSNNLDLAVGPIGYLPADNCLPSQHFA 1465
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRSNGKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1466 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSNGKQSRTVAGPDFPFKLSPCSGTI 1525
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELPASSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1526 SGTDIGGGEPVPDKELPASSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1585
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1586 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1645
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1646 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1705
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQMPKS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1706 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSAKQSRLQKSSPFPSLPDGMMTRA 1765
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY
Sbjct: 1766 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 1825
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG NSTMP++NPFMFNSLGTSHL SLG+NGSR FDTQGKENDEPGLD+
Sbjct: 1826 FPGESSAGASDRSGANSTMPIENPFMFNSLGTSHLVSLGLNGSRGFDTQGKENDEPGLDN 1885
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+EVTDSNSSKDKLPHWLR
Sbjct: 1886 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEVTDSNSSKDKLPHWLR 1945
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 1946 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2005
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG +H DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2006 RKRKSVIFRHSSADVVGSSSQQEELEGGSSHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2065
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPGLESDLSIP+LNLNMNP SSSL TN QKKT+MGLSPSPEVLQLVASCVAPGS++S
Sbjct: 2066 TSRLPGLESDLSIPALNLNMNPPSSSLQTN-QKKTNMGLSPSPEVLQLVASCVAPGSNLS 2125
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSILEKTLP STSHDP EDLLGSKGSPGKGKKQRLSFSSLDFYNQ+KPDSLES
Sbjct: 2126 SISGKLNSSILEKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSLDFYNQDKPDSLES 2185
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL
Sbjct: 2186 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 2220
BLAST of Lsi01G000310 vs. NCBI nr
Match:
KAA0052434.1 (protein CHROMATIN REMODELING 4 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1605.9 bits (4157), Expect = 0.0e+00
Identity = 811/877 (92.47%), Postives = 842/877 (96.01%), Query Frame = 0
Query: 4 ARLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTS 63
A+LRARQKERLAKRNALEESFSREGVTL GS PHP CPHTNAADPDQAA SLETNKERTS
Sbjct: 1453 AKLRARQKERLAKRNALEESFSREGVTLHGSFPHPPCPHTNAADPDQAAASLETNKERTS 1512
Query: 64 VFFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFV 123
VF LEDDKLVH DAPKSRIDSTLRLGRISRHK++NNLDLAVGPIGYS ADNCLPSQHF
Sbjct: 1513 VFVLEDDKLVHSADAPKSRIDSTLRLGRISRHKVSNNLDLAVGPIGYSPADNCLPSQHFA 1572
Query: 124 GSNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKLSPCSGTL 183
G++ ANSVPINLLPVLGLCAPNA+QLETSR+N SRSNGKQ RT AGPDFPFKLSPCSGT+
Sbjct: 1573 GTSHANSVPINLLPVLGLCAPNAHQLETSRRNSSRSNGKQSRTVAGPDFPFKLSPCSGTI 1632
Query: 184 SGTDIGGAEAVPDKELPASSAERLHSHLLFAQEKTTPPNFPFDEKLLPRYPIPSKNLASA 243
SGTDIGG E VPDKELP+SSAERLHSHLLFAQEK TPPNFPFDEK+LPRYPIPSKNL+SA
Sbjct: 1633 SGTDIGGGEPVPDKELPSSSAERLHSHLLFAQEKMTPPNFPFDEKMLPRYPIPSKNLSSA 1692
Query: 244 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTF 303
RLDFLSNLSLDSRVEAVNGCLPTIPLLPNL+LPSLD+MRGN QDEEEAPSLGLGRMLP F
Sbjct: 1693 RLDFLSNLSLDSRVEAVNGCLPTIPLLPNLQLPSLDIMRGNPQDEEEAPSLGLGRMLPAF 1752
Query: 304 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLK 363
SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWD MLK
Sbjct: 1753 SAFPENHRKVLENIMMRTGSGSANYFRRKPKGDGWSEDELDFLWIGVRRHGKGNWDAMLK 1812
Query: 364 DPRLKFSRYKTSEDLSSRWEEEQLKILDGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRA 423
DPR+KFSRYKTSEDLSSRWEEEQLKILDGSACQM KS+KQSRLQKSSPFPSLPDGMMTRA
Sbjct: 1813 DPRMKFSRYKTSEDLSSRWEEEQLKILDGSACQMLKSAKQSRLQKSSPFPSLPDGMMTRA 1872
Query: 424 LHGSRLVTGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNEQFATIPTWNHDKYHTY 483
LHGSRLV GPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQN+QFATIPTWNHDKYHTY
Sbjct: 1873 LHGSRLVAGPKFHTHLTDIKLGLGDLVPNLPRFEASDRLGLQNDQFATIPTWNHDKYHTY 1932
Query: 484 FPGESSAGASDRSGTNSTMPVDNPFMFNSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDS 543
FPGESSAGASDRSG +STMPV+NPFMFNSLGTSHLGSLG+NGSR FDTQGKENDEPGLD
Sbjct: 1933 FPGESSAGASDRSGPSSTMPVENPFMFNSLGTSHLGSLGLNGSRGFDTQGKENDEPGLDD 1992
Query: 544 YGKLPNLLDRSLKLFHESPSSLENGSGLLPDPSKGLSVANSKDEVTDSNSSKDKLPHWLR 603
YGKLPNLLDRSLKLFHESPS+LE+GSG+LPDPSKG+SVANSK+E TDSNSSKDKLPHWLR
Sbjct: 1993 YGKLPNLLDRSLKLFHESPSNLESGSGVLPDPSKGISVANSKEEATDSNSSKDKLPHWLR 2052
Query: 604 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 663
EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK
Sbjct: 2053 EAVNVSSKPPDPNLPPTVSAVAQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKK 2112
Query: 664 RKRKSVIFRHSSADVVGSSSQQEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTS 723
RKRKSVIFRHSSADVVGSSSQQEELEGG AH DATVSCSISLVSP+AMHHPQPQEMAGTS
Sbjct: 2113 RKRKSVIFRHSSADVVGSSSQQEELEGGSAHKDATVSCSISLVSPNAMHHPQPQEMAGTS 2172
Query: 724 ASRLPGLESDLSIPSLNLNMNPSSSSLHTNQQKKTSMGLSPSPEVLQLVASCVAPGSHMS 783
SRLPG ESDLSIP+LNLNMNPSSSSLHTN QKKT+MGLSPSPEVLQLVASCVAP S++S
Sbjct: 2173 TSRLPGPESDLSIPALNLNMNPSSSSLHTN-QKKTNMGLSPSPEVLQLVASCVAPCSNLS 2232
Query: 784 SISGKLNSSILEKTLPPSTSHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLES 843
SISGKLNSSIL+KTLP STSHDP EDLLGSKGSPGKGKKQRLSFSS DFYNQ+KPDSLES
Sbjct: 2233 SISGKLNSSILDKTLPLSTSHDP-EDLLGSKGSPGKGKKQRLSFSSSDFYNQDKPDSLES 2292
Query: 844 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQEL 881
DDSSKTQSDPSRSKRPDGEEISSEGTVSDR ASDQEL
Sbjct: 2293 DDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQEL 2327
BLAST of Lsi01G000310 vs. TAIR 10
Match:
AT5G44800.1 (chromatin remodeling 4 )
HSP 1 Score: 459.9 bits (1182), Expect = 4.5e-129
Identity = 339/917 (36.97%), Postives = 458/917 (49.95%), Query Frame = 0
Query: 5 RLRARQKERLAKRNALEESFSREGVTLRGSLPHPQCPHTNAADPDQAAGSLETNKERTSV 64
+LR RQK +A+RN++EE SLP + + DQ ++E +
Sbjct: 1383 KLRERQKNLIARRNSVEE-----------SLP--------SGNVDQVTEVANQDEESPTS 1442
Query: 65 FFLEDDKLVHLPDAPKSRIDSTLRLGRISRHKITNNLDLAVGPIGYSAADNCLPSQHFVG 124
L+D K DA K + S S L SQH G
Sbjct: 1443 MDLDDSKASQQCDAQKRKASS-------------------------SDPKPDLLSQHHHG 1502
Query: 125 SNAANSVPINLLPVLGLCAPNANQLETSRKNLSRSNGKQIRTGAGPDFPFKL-------- 184
+ S+P N LPVLGLCAPN Q E+SR+N SR +Q R GP FPF L
Sbjct: 1503 AECLPSLPPNNLPVLGLCAPNFTQSESSRRNYSRPGSRQNRPITGPHFPFNLPQTSNLVE 1562
Query: 185 ------SPCSGTLSGTDIGGAEA----------VPDKELPAS-SAERLHSH-LLFA--QE 244
P G L +I +P ++ P S ER S FA QE
Sbjct: 1563 REANDQEPPMGKLKPQNIKEEPFQQPLSNMDGWLPHRQFPPSGDFERPRSSGAAFADFQE 1622
Query: 245 KTTPPNFPFDEKLLPRYPIPSKNLASARLDFLSNLSLDSRVEAVNGCLPTI------PLL 304
K N PFD+KLLPR+P + + ++ D ++NLS+ R E + + P L
Sbjct: 1623 KFPLLNLPFDDKLLPRFPFQPRTMGTSHQDIMANLSMRKRFEGTGHSMQDLFGGTPMPFL 1682
Query: 305 PNLKLPSLDVMRGNAQDEEEAPSLGLGRMLPTFSAFPENHRKVLENIMMRTGSGSANYFR 364
PN+K+P +D N Q E++ P LGL + S+ PENHRKVLENIM+RTGSG + +
Sbjct: 1683 PNMKIPPMDPPVFN-QQEKDLPPLGLDQFPSALSSIPENHRKVLENIMLRTGSGIGHVQK 1742
Query: 365 RKPKGDGWSEDELDFLWIGVRRHGKGNWDPMLKDPRLKFSRYKTSEDLSSRWEEEQLKIL 424
+K + D WSEDELD LWIG+RRHG GNW+ +L+DPRLKFS++KT E L++RWEEEQ K L
Sbjct: 1743 KKTRVDAWSEDELDSLWIGIRRHGYGNWETILRDPRLKFSKFKTPEYLAARWEEEQRKFL 1802
Query: 425 DGSACQMPKSSKQSRLQKSSPFPSLPDGMMTRALHGSRLVTGPKFHTHLTDIKLGLGDLV 484
D + KSS+ + KSS FP LP G+M RALHG + T P+F +HLTDIKLG GDL
Sbjct: 1803 DSLSSLPSKSSRTDKSTKSSLFPGLPQGIMNRALHG-KYATPPRFQSHLTDIKLGFGDLA 1862
Query: 485 PNLPRFEASDRLGLQNEQFATIPTWNHDKYHTYFPGESSAGASDRSGTNSTMPVDNPFMF 544
LP FE SD LG ++E F + D PGE SAG S+R+GT++ +P + PF
Sbjct: 1863 SPLPLFEPSDHLGFRSEHFPPMANLCTDN----LPGEPSAGPSERAGTSTNIPNEKPFPL 1922
Query: 545 NSLGTSHLGSLGVNGSRAFDTQGKENDEPGLDSYGKLPNLLDRSLKLFHESPSSLENGSG 604
NSLG +LGSLG++ + +T E + GKLP LD L +S +++ G
Sbjct: 1923 NSLGMGNLGSLGLDSLSSLNTLRAEEKRDAI-KRGKLPLFLDMPLPQMLDSSNNVFLGRS 1982
Query: 605 LLPD---PSKGLSVANSKD-EVTDSNSSKDKLPHWLREAVNVSS--KPPDPNLPPTVSAV 664
P P++GL+ +N ++ +SS++KLPHWLR V V + P P LPPTVSA+
Sbjct: 1983 ANPSFLHPNRGLNPSNPMGRDIMGISSSENKLPHWLRNVVTVPTVKSPEPPTLPPTVSAI 2042
Query: 665 AQSVRLLYGEDKFITIPPFVNPGPPPSLPKDPRRSLKKKRKRKSVIFRHSSADVVGSSSQ 724
AQSVR+LYGED TIPPFV P PPP P+DPR SL+KKRKRK + D+ SS
Sbjct: 2043 AQSVRVLYGEDS-TTIPPFVIPEPPPPAPRDPRHSLRKKRKRKLHSSSQKTTDIGSSSHN 2102
Query: 725 QEELEGGPAHGDATVSCSISLVSPHAMHHPQPQEMAGTSASRLPGLESDLSIPSLNLNMN 784
E + G+ S + L P P TS S P +P NLN
Sbjct: 2103 AVE---SSSQGNPQTSATPPL--------PPPSLAGETSGSSQP------KLPPHNLNST 2162
Query: 785 PSSSSLHTNQQKKTSMGLSPSPEVLQLVASC--VAPGSHMSSISGKLNSSILEKTLPPST 844
SS + P PE ++A+ APG + I+G S LE
Sbjct: 2163 EPLSS---------EAIIIPPPEEDSVIAAAPSEAPGPSLEGITGTTKSISLE------- 2206
Query: 845 SHDPEEDLLGSKGSPGKGKKQRLSFSSLDFYNQEKPDSLESDDSSKTQSDPSRSKRPDGE 880
S E + + G +++ ++ EK + ES+++ Q +P
Sbjct: 2223 SQSSEPETINQDGDLDPETDEKVESERTPLHSDEKQEEQESENALNKQCEPI-------- 2206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4KBP5 | 6.4e-128 | 36.97 | Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana OX=3702 GN=CHR4 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KJ30 | 0.0e+00 | 92.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526520 PE=4 SV=1 | [more] |
A0A5A7UAM7 | 0.0e+00 | 92.47 | Protein CHROMATIN REMODELING 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695... | [more] |
A0A1S3AZG8 | 0.0e+00 | 92.38 | protein CHROMATIN REMODELING 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348426... | [more] |
E5GCL1 | 0.0e+00 | 92.38 | Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo OX=4... | [more] |
A0A1S3AYF1 | 0.0e+00 | 92.38 | protein CHROMATIN REMODELING 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348426... | [more] |
Match Name | E-value | Identity | Description | |
XP_038881449.1 | 0.0e+00 | 93.96 | protein CHROMATIN REMODELING 4 isoform X1 [Benincasa hispida] >XP_038881450.1 pr... | [more] |
XP_038881453.1 | 0.0e+00 | 93.96 | protein CHROMATIN REMODELING 4 isoform X2 [Benincasa hispida] | [more] |
XP_011658345.1 | 0.0e+00 | 92.82 | protein CHROMATIN REMODELING 4 isoform X1 [Cucumis sativus] >XP_011658346.1 prot... | [more] |
XP_011658348.1 | 0.0e+00 | 92.82 | protein CHROMATIN REMODELING 4 isoform X2 [Cucumis sativus] | [more] |
KAA0052434.1 | 0.0e+00 | 92.47 | protein CHROMATIN REMODELING 4 isoform X1 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT5G44800.1 | 4.5e-129 | 36.97 | chromatin remodeling 4 | [more] |