Lsi01G000100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G000100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	chr01: 152725 .. 168105 (-)
RNA-Seq Expression	Lsi01G000100
Synteny	Lsi01G000100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAATAACATGATTGGTAATGGTATTACTAGAATTGATCGATCTTCGACCGGCGGTTTATTGCAGGCACGGCGAGTCGGTAGTCGGCATCGACACTTCCATTTCCCCTGCCCTTCCGAACTTCCGCCTCCAAAGTCCACCGCTTCAAAACTCTTCCGCTGTAAGATATACTTCGTAACGCTGCTTCCACCACCACTTTCTGAAAAATCATGCCACCAGGTTATATTTTTTGTCTTCAGCTGTGATTCCATTTCATTCATTCCACTCTATCATCAATGCCAAATTTTGCTCTCTATACTTCCATTGCAGATCTCCCTGGCTATTACTATGATGCCCAGAAGAACAGGTATTTCCCTCTCAAAGGCCCAATACCTGGTTCTTCTCGTACTTCTTCCTCATCCTCTTCAGCCCCTCATCATAAACGAGTTTCTAACTCCACTCCGGTGAGTATTACTCTACGTCTGGATGCTACCAATTTCAATTTTTTCGGGTTAGGATTGATGATTTTCTACGCGCAACCTGCTTCTCACAAAATTTCCGTACTTAGTTGTTTTATTAAAAGGGGCTAAATCTCATTTATGCAAAGACGGTGTTTGACTTCTCTCACACGAGGTACCTAAATTTTGCGGTTTCTTAATAGTCGTGAATGTGCCCTCGATGATTAGGTTTCGTTGTGCAGACTCAAACCCGGTTAGAGTTAATTTCCTCTTGGGGAGCTTTTAGGGGAAAAAAACTATAAAGCTCTTGGAGGCAGCCTCGGGCTTTAAAATTGATATTTTCAAAAGCTAATTATTTAGACGTCATTTGGTAACTATTTCGTATTTTATTTTTGATATTTGAAAATTAAGCCTATTTTCTCACTTTTTCTTACAATGGTTTGCATATTTCTAGAGTACAAGAGTTGAATTCTTAGCCAAATTCTAAAAACAAAAATAAGTTTTTAAAAACTACTTTTTTTGGTTTTCAAAATTTGGCTTAGTTTTTGAAATCATGCTAAAAAGTAGATAAGAAAGTAAGACTTTTAAGGGTGAGACAAGTGTTTGTAGGCTTAATTTTTAGAAACAAAAAACAAAATGGTTATCAAATGGGACCTTAGCAATTGCATTTATTCCCCATCTGTATTATCAAAGACGTTCTATTGTACATAAAAGCTCGTTATCTTGCTCCTTTTTTGTTTTTATTTTCTTCTTATCAATGAAGTTTCATGTTTCCACCAACCAGTCTCCCTTTTCTCCTCTCTCATTTCCGCCATTTTTTCTCTCATTTTCTCCTAAAGGTTCCTTTCAAGAACTATATATATATATATATATATACAAAATAATAATAAATAAAAATTAATAAGACTTTTCATTGATAAAATGAAAAGAGACTAACTCTCACAATACAATTAAACGAAACAAAACAAAACAATTGGAAGACTCTTCTTCACTAGTGCTTTAGGGAGAGGGGTTGCCTTAGGTTGTTCTCTTTTGTTCTTTGATGGAATATGCAAGTCTGTTTCTTATAAAAAAAGAAAAAAGAAATAAAAGAAACCCCCTTTGTATTAGTTTCCAAGGACTTTTGTCATTGTGTTAGGTCTTACTTTTTATAGATTGAACCCCTTTTGTATAGTTAGTTGGTTGGCTCCTTTCGTTTGAGCTTGCTTTGAAGTTGAAATAATATCATCAATAAACTAATTAATACAATTAATTGTGTAATTGGTAAAAAAATTAAAATTGTTAAAATATGTATAATGTATTAGATAGTAAAATTAGAATAAAATATTAACGTAGGGGCAAAACAGGAAATTAAAACTTTCTTATCCTTCGGTCACTTTTTGATACGTTATGGATTATAAATTTTTTATGGATTGTAATTACTATGCTATTGTTTTCACTTCCTTAGGATATATCATATATGCTCTGAGGACTATTGCATTTTTCATGGTTGGTAAGCTGACATTTGATGAGGGTCTGCGGTGCTGTCATGTGACAGTTTTGCCCTCATTATAGAAATTATTTTTATCATATTTAGGTACTTGTTATTGATACTTGAAGAAAAATCTTTTTCTCTGCAGACAGTCGATTCATGTTCGAAGACTGACTTAAGAACCGTGAAGCTGATTCAAGCCAGGGAGTTATATGGTGATGTTATTGCTTCCAGTACAGGAAAGTGTAACTTCAAGGAAAAATTCCAAAATTTACTGGCATCTAAACCAGTGGTATGTTCTTTATCAGAGACAATCCTAAAGTTGGAAGCATTTGTTCTAATTTCACTTTAAATGAAAAGTTGAACTAGGGTTTAATATATATATATATATATATATTATTTTATGGATGTTTGTTTTGTGGTGGAAGCCATATCAGAAAGAAGGGTAGTCAACGCGTTATGAGAAAGAAAGCTGTTAACTTTGGACATCATATTCTTTTTTATTTATTTATGATTAATTTTATGAAGAAACAACTTTTCATTGATATAATGAAAAGAAATAGACGTTTAAGGTTACAAACTCCAAAAGGAGTGATGATAAAATAAACAAAATACAAAATCAAGAACTTAGAAACAAATACAAGCAAATGAAGACCAGCCAAGAAACAATAAACTAATACCGAACCATGGATTGTCCAAAATCCTTGGCTTGAGACAATTAATGATTGAAGCTGAAAGTGAAAGGTCTTTCTCCTCTTTGCTGCTAAGAATCAATGGAATAAGTTAGTCTTCCCAACCTGTTTGCTTTTTTGATTGAAGCTCAACTAATCTTTGCATCTTGCTTGCTTTTTTTGGATAAAGAACTTAATTTCCTTCAGATACTGCTCCATTAATATTCCTTGCACTAAAACTCGAATGCTACAATATTGAAAAGAAAGGTCCTACCTCATACTCCACATCCCTCCTTTTCTTATCAATATATTTCTTCATCCGCTCTTGCACCAATCATAATTGCTCCTTCAGCAATTCTAACATAACATCCCTTTCTCTTAACTGTTGGTCCAACCCAGAATTAGATGAAGGATGATCTCCATAGTAAACCAAAGCTGGTGGAAGACGCCCACACACAGCCTGAAAAGGAGTCATTCCAATAGAAGCATGAAAAGTTGTATTGTACCAGTATTCAGCCCAATGCAACTAAGAATGCCATTGTTTAGGCCTCTCCCCACAAAAGCAGTGCAAGTAGGTCTCCAGTGTTATTCACTATCTCAATTTGACCATCACTTTGAGGATGGTAAGCTGTGCTTCTATTCAATCGTGTTCCAGTTGATCGAAATAACTCTTTCCAGAAATTACTCAAGAACACCTTGTCCCTGTCAGACACTATGGATTTCGGATAGCCATGGAGGCAAACTATCTCCTTAACGAACACATCCGCCACTGACTTTGCCGTAAATGGATGTTTGAGTCCCATAAAATGGCTATACTTGGATAAACTATCCTCCACGACGAAAATAACATCATATCCACTAGACTTGGTTAATCCCTCAATAAAATCCATTGAGATGTCATCCCATGTGGCTTCTGGTACACCCAAAGGCAGTAGTAATCCAGCTGGAGTTAATGCCAAGGTTTTATTCCTTTGACATACTTCACACTCCTCCACATACTTTTTTACATCTCGCTTCATCCCTTCCAAAAACAATTCTCCCAATAATCATTTGTATGTTCTCAAAAATCCTGAATGCCCACCAAACACCGAGTCATGATAAGTGTGAAGGATGGCCAAAATCAATAGGATGATTTATACAACATCAGACGCCCTTTATACCTCAACATCCCTTACTGTAACAAATAATTAGAAACACTCTCACCATCCTTCAACAGTTGTTGGATTATTTCCTGCTGCTTGGAATCCTTCTCCACCTCTTCCTTAACCACCTTCACATCAACAAGTGTAGGTGCTGTCAAATGAGCTAATCCGATCTCTATTGGCATTCTAGATAAGGCGTCTGCAACTTTATTCTCCACACCCGGTCGATACACCACCTCAAAATCATATCCAAGAAGTTTTGACAATCATTTCTAATGTTGAGGTTGGATCACTCGCTGTTCTACCAAGCATTTCAAAGCTCTCTGATCAGTGGTTACTGTTAACTTTTGACCCAATAGATATGGTCGCCACCTTTGAACTGCCATAACAACTGCCATTAACTCACGCTCAATACACTAGTTTATCCCGATCCCTGGATGACAAGGTATGACTAAAATATGAAATAGGGCGTCTCTGTTGCATTAGTATAGCCCCAAGTCTGAAGCCTGAAGCATCAGTTTCTATTTCAAATGGCTTGCTAAAGTCAGGCATTGTCAGGACCGACAAGGTAACCATGGGATTTTTCAATTTCAAATGGGGTTGGATCACTCGCTATTCTACCAAGTATTTCAACCTAAGGGCAAGTGGGAGTTGGCCATCCATTATTGCTCGAACCTTTTCAGGATCCAGCTTCAACTCCTCTTCCTGAAACCAAGTGGCCTAAATACTCAATTCTTCCCCTCATAAACTGACATTTATGGCGATTGGCATACAACTCATTGTCCTGCAAAACTGATAACACACTTTCCAAATGCTTCATGTGCTCCTCCAAGTCCTTACTATACACCAATATATCATCGAAAAATACAAGCACAAACTTCCTCAAATACGACTTGAATATCTTGTTCATCAGTGCTTGGAAAGTAGACGAAGCATTAGTCAACCCAAACGGCATGACCAAGAATTCATAATGCCCCTTGTGTGTTCGAAAAGCTGTCTTCTCCACATCATTCGGGTGCATTCTGATTTGGTGGTAACTAGATTTCAGATCAATTTTTGAAAACCATTTAGCTCCATTTAATTCTTCAAACAACTCTTCTATCACTAGAATGGGAAACTTGTCCGAAACTGTAACATGGTTCAATGCTCTATAGTCCACACAAAAATGCCATCCACCATCTTTCTTTTTGACTAACAGCACTGGGCTGGAATAAGGACTATAGCTTGGCCTGATAATTCCCGAAGTGAGCATCTCATTCACTAACTTCTCCATTTCTTCCTTCTGGCTATGAGCATAGTGATACGACCTCAGATTGATAGGTTCAGCCCCATGTTTCAAATGAATATGATGTTCAACCCCCTACTCGGCGGCAACTCCTCTGGCCAATCAAAAACACTATCTTACTTTTGTAATATTGACGACAATGCTTCGGTTGGATTGAAGATTTCATCAACTCCATAGAAAGCCTCCCATGTCTTGAATCCTTGCAATTCTCGACATTCTACCAGGAATTCTTGGTCTTCCCCCTCCCAAGTTTTAATCATTCTCCGCAAACTTACTTGGATTTTCGACAAACTGGGGTCGCCTTGTAAAACTATTGTCTTCTCACCTTGCACAAACTTCATGGTCAATGTTCTCCAATCCACCTCGGTAACCGCCAAGGTGTGTAACCATTGCATTCCCAAGATTACATCCACTCATCCAACTCCAAAGGTAAAAATTCATCAACAATTTCCATTCCTCCTAACTACAATGCAACTCTTTTACAAACGCCTTTTCCTTTGACTACAATTCCTGTCCCCATTATGACTCCATAATGGGCTGTGTCGTCGATCTTTATCTGCAATTTTTCTACTAAATGTTGTGCAACGAAATTATGTGTGGCTCCACAATCGATTAACACTACCACACTCTGATTCGCAATTTCTCTTTGGATTTTCATGGTCCCTGGATTCGATAACCCTACCACCAAATTGTCAACCTAGTTGAGATGTCCAGGTGCACTCACTGATCCTTTGTTTTTTTGTTTCTCTTGTTTTTGTATCAATCTTGTACATTGAGCTTTAGTCTTAATTCATTATATCAATGAAGAGACTCGTTTCCTTTTTTAAAAAAAAAAAACCCTACCACCAAATTCAACGATAATTCTACCATTTTCTCATCCTCCTCCCCTGCTACTGTGACTGTCTTTAGTTCCAGCGATTCAAATTCCTCATTTGCATCTTCGAGAACTTCCAAATCCACCGCATTTTCATGGACTAGCAACACTCGTTGATCTTTGGCTTTACATCGATGACCTACTGAATATCATTCATCGCGGTGGTAACAAAGTCCTTTCTCTTTCCTCAATCGAAATTCCGCATTCGATAATCGTTTAATCGGACCATTTCTTTTCCCTTTCGCGTCTAAACTCCTCACAAGGTAATCATTCTCATCGACACCGGTTCTAAACCCTTAGGAGTTTCCTTCGCCCCCGAACTCGTCCCTATTTTAGAATTATTAACAACATTTTGGGCTTTATTAACCGCATCAGGATTCAGGCCCGTTTCGGAGCAGATCAACTCCCTATTTTCCACTTGTTGGGCTACTTTCATCATATTTACTAGCCCAATAGGTTCCCGACACTCTACCTCAGCCTTAACCCACGGTGCCAGTCCATTCATGAACATATTTTCTAAAATTTCATCCGAAAGTTGAGGTAAAGGTGCGACTAATTTATTGAACAAATTGATGTACTCTTCTACAATCGTTTCTTGTTTAATTGCTAAAAATTGGCCATATACCGTTCCCTGTTGCTGTTATTGGAAGCGCTAGAGAAGTCTCATCTTCAAGGTTTTCCAGTCTAGAAAAGGCTCGCGTTCCTTCTTCGCTTGGTACCAGTCAAGGGATACTGATTCGAAACTAATAACCGCTACAATCAACTTTTTTGCTTTGGTTAACTTGTGGATCTGAAAATATCGATCTGCATGGAACAACCACGCATCCGGATTAGTTCCATTAAAGATCGATATCTCCACCCTTTAAAACGTGTTTCTCTCGTTTTCGTTGTTGCTGATCCCTGTCCTCATTATCTCAGTCAGTAACGTCGGATTTTCTCCTGAAACATCTCTTGATTTGTCGATTCCGTTGGTTCCTTCATTCGCCGGAATCGTCGTTGGAGAAAGTCACGTCTGTGCTACTTCCGAAACTAGCATGGTCAACAATTTCCGCATCTCCTCAACCATCTTCTGCTGCTTATCCACTTGCACATTCAATCGTTCTACACTTTTCGCCAATGACGACAGGTTCTCTTCCATACTCGGTAACTTCTGAATTTCTACTCGTATGGCTGCGATCTCAGTATCCGTCGCATCAATCCATTCCTCCAACATCTTTTGCGCCATTCTACCCAAACATCCCAATGTGTTGCTCTGATACCAATATGAAAGGTATCGGTTCGTCTTTCCTCCCTCTCTCAGGAAGAAACTTCCTCTCCAAGTCAAAAACTAACTCCCCGCTCTCCTTTCTCTCCTACTTATATCCTCCCCCTTTCCACTCAAATAAAACACACTCCCCTTGTAGAACTTCCCCAGTGGTCCCCCCTTCTACATTATTTACTTTCCTACCCCTCCTATTATATTGAAATATAATCGGGGGCCTAACACAATGATGTTGTTGAAGATTCACATTCCTTTGGTTTGTCTTCCAATTGGTATTCTCTCAAGAACCCAACGAGCAATATTGACTACTAATCTCAATAATAGACAAGAATTTGCATGGAATTGAAGTACAAAGATTCTAAGCTTAGAATTATTCAAGAAGTATCTTTATAACTTATTCGGAGGAAACGTCTTTCTGAACAGGGGACTAAAATAAAAAAATAAATCTTCTGGATATGAATCTTCGATTTAAACATCACTCAATGGGTTATGAACATCCAATTCCACACTACTTAGACTTGAATCTGACTCATTATCGGAATCATTAGTTGAAAAATATTTAGGGGAAGAAAATTCATCGATGCTACTTACCTTTTTGGATAAACTGGTGGGCTTGGGCTATGTTAAATAATTAGATCTTGTTAGGTAAGTTTTGTAAGATAATTATTGTTTTGTTCCAATTGAGACCCTTCAGAAGTTATAGAACTCCTTTTGCCTTCCTTTAAATATCTTTTAAGCAATCATCTTGTCATTTTGTAATTCTTTTACCAAACCATTGATCCTTCAGAAGTTTTTGTAACATATATCCTCCGTAGAAGATTTTTCTGTTTCTTTATTCTAATAAGTTGGACATTATGTTAGATCCTTTAATGCTAGTTGTGCTCTTACTTCTCCATGCAGGTTTGGAAATACCGAGGAACGGATACCATGGGGGATAGTGCTTTGCAAGAAATACCCATTAATGTAGACACCCTGGAGGGTCAAAGGGAATCTTCTGTTCTATTGACGGGCAACATAAGTGGCTCCTTGAGGTATTTATTGAGTTGCTCTACTGTTTGAATGCATTTGTGCTTAGACAATGCAATAGAGTTCAATCTTGAAAGGTAGATTTTTATTAACCGGTTATGAATTCAGATTAGTATTGTTTGTATTTGTCCAGAACATTTGGGTAGCTTCAAACAAGTTATGTGTAAAATAGGGTCTTTAAGGCATTTAAGGCATTTGACTCATTTCATTAATTCAATGAAAAAGCCTTGTTTCCATTTCAAAAAAAAAAAAAAATTCAACAGTGCAGCCCCATCAAAACACTCAACCATGTAGAAGTGTATATAAAATCAAGAAGAATGGTTCTCTTTCCCCCTCCATGTCCTTTAGTTTTTTGCCTCTCGCCCATTGCCATCTCTTCGATAGAGTTTGCGTTTAATCTGTGTGGGAGGCTGGGTTTATGCCGAGTATTTGGTCTATAAGGTGTGTGTTTGTTTTAAATTTTTTTATTGATGAAGAAGAAGAAACTGAATTTTATTGACGAACCAAATTTACAAAAGGGTGGGGGAAACTTCCAACCATCCAGTGTGGGATACAAAAAATTCATCCACCTAGCTATGGGATTAGTGAAACTTTAGTCCTTAAAGGAATTGATATATTTGCACCAACTAAAAGCAGTAAAGAGCACCAAGTCAAGAAAGTGATTGTGGGACTTAGCTTTATCATTAAAAACGTGGTTATTCCTCTCCCTCCTGAGTGTCCAGCCGAAAGCTCTAACCATATATGTCCAAAAGACTTCCTTTTGGGCTTTGAAAGGTTGCCCCAACAGTGAGTACTAGAGGAAATCATGGATGTTGATGGGTAGCACAGTAAAGCAGCCAAACGATTGCGTGACAACTGGCAAAGGAGAAGGTTCAATATAGTAGTTAATATTGTATAGTAAATGTGGTAGTGACAACTTCATTCCTTTTCCCTTTATTGGATCTCCTTGAAATATCTCTGTGAGTGCTACATTAGTCTCGTATGCTTCAATTGAACATAGTTATCAATAAGTTCAAGATTGATGATTACTAGTTTAGAAGCACAGACACTCCTAAAATGGCCAAGTGCCTGTGTCAGACATGTGTTTGACACCGACACGCCCCCGACACGTGTCTGACATGCCAACTTATTTTATTATTAAATTTGTAATGTCTGACACGGCCGAACATACCCCCGACACGACCAGACACGGCGGGGGACACCTCATGACACGACAAGCTGCAATTTTTTTTTTAAAAAAAACAATTAAAACGTTGCATTTTTATCCCGCTAAGTGACAACATAGGGAGGGGAGGTCGGCGTCGGCGACATTGATCCGGCTAAGCGACGACAAAGGGAAGGATCGGCGTTGAGAACTTTGACAGTTGTGGTGAAGGTCGAGAAGAATCGAGGAGGAAGGGGGGAAAAACACAATTGGGGAGGAGAGATGGGGGGCACATCAAAAAAGAAAATAGTGGAGGGAAAGAGAAACATCATTAGGGTTAGGGTTTTTACTCCTAATGGGCTTTTGGGCTTCTTTACATCCCTTCAATGCTGGGTCTCTTTTTAATGGGTTTTTGACTTCTCTTTTAAATGCCCTTTCCTTCTTCTTTTTTCTTTTTATTACTATTATTTTTAATTGTGTGCCAAATACTATTCTTCTGATTGTATTTGGCCCTCTTCAATTTCTCGTGGTTTATCTAAATCTCCATGGAGATTCATTAGTCACTATATTGATCTGGTAGCTGATCGCATTATTCGTCGAATAGGTGATGGAGTTTCTACATCATTTTGGCATGATTCTTGGCTTAACTGTGGTGTTCTTGCTACCGTGTATCCACGTCTTTATCGCATTACTCAACATCCTGAGACTTCTGTGGCGAATGCTTGGGTACCTTCCACTGCTGCATGGAACTTAAATTTAAGGCGTAATCTCACTGAATTAGAGATTTCGGAATGAGCATCTTTATCATCACATTTGGCTTCCATCAGATTGCGAAACTCTCCTGATTCTTAGCTATGGCCTCTTGACCCATCCTCACATTTCACTGTCAAATTTCTTATGACCTATTTAGTGAGTGCATTGGATAGTGTTTTGTCTGATCTTTATTTTGCGATTTGGAAAGAAAGATATCCAAAAAAGATTAAAATTTTTATATGGGAGCTTAGCTGGGGTGCCATTAATACTGCTGATCGTCTGCAACGCCGTTTTCCATATTGGTCTCTTTCCCCATCTTGATGTCATATGTGTTGTAGACATGCCAAAACGCCGATTCATTTGTTTTTGCACTGTTCCTTTGCTACCCGTTTTTGGCACACCATTTTGCCAGCCTTTGGATGGTCTTATACGCGCCCTAATAGTATCTCAGATGCTCTGGCATCTTTGTTGGTGGGTCATCCTTTTGGTGGTGCTAAGAAAACGATTTGGTTGGCCCTCATTCGTGCTTTCTTTGGAGTTTGTGGGGTGAACAGAATAGGCGACTCTTTCATGATTCTTTTTCCTCTTTTCATCTCTTGGTGTAAATTGAAACACCCTTTCACTCATTATAGCTTATCCTTTTTAGTCAATAACTGGCGATCACTCTTGTAATAATGTATCCTCCGGGATTTTAATCCCCTTTATCAATAAATGTTTCTTTTACCAAAAAAAAAAATTACTATTATTTTTAATTTCTTCTTTATTATTTATTATATTTAAAAAACATTATTTTTAATAATTAATAAAAAATGAAGTATTTTAGGTTTGATCTTTATATATATATTTATTAAAAAATTAAAAAAAATAACGTGTCCTCGACGTGTCGTATCCTACATTTTCAAAAATTGGCGTGTCGTCGTGCTGTGTCGTATCTCGTGTCCCGTGTCAGTGTCCGTGCTTCTTAAGTTCAACCTCAGGGTTCAAGCTATGCAGAAATGGTGAAGAATGAAGGTCACTGTCAATCCTCTGTTTTAAGATCGGAAAAAACAGAGCAAGGTGAAGGAGAAAGATTTTGTCTTCGATCAACCCTCTGTTTTGGTGAAAGGAAAACAAAGCATTAGTTCATTCTGGGTAAGGAAAAATACAGAGGTCCTCCAGGAAGATTTTAACAACTTTTGGATTGTCTCTAGATTGTTTGTGTTTAACGACTGGAAGGAGATTGCGAAGTAATGGAAAAGCTCTTTAATACTAAAGTCATCATAAACCCTCTGTTCCCAGAAAATGCTTTGATCAAATTAGAGGATGGATCTTTAGAGGACCTTATAGAGGATCTTGGAATGTGGAAGGAGTTGGGGCCTTTCTATTTGCTTTTCGGAAAGTGGAACAGGTTTAAACACAGTCGACCACTATTAATGGAAGGATTCAGAGGTTGACAAAAAATAAAATACCTCCCTTTGGACTATTGGAGTAGGATAACTTTTGAAGCAATAGGAGAATACTTTGGGGGCCTGGTGGACATTGCAACAGAAACTCTTTAACCTGTTGAACTGCTCGGAAGCCAAAATTCAAGTCAAGAGGAATTTGTGTGGATTTATGCCTTCAACTATTGAAATCATTGATTTCAACCGAGGAAATATTTTTCTGAATTTCGGAGATATTGAAGTCATGGATCCTCCATATATCACTAAAGGGCCTCTACTTGTCACGGACTTCACAAACCCACTAGATTTAATGCGTTTAAATCAAGTCATGGAAGATGAAGGAGTTCATTCTAGTTTTAAATCAGATGAAAATGGATCATTTAATCTCAATTCAATTAGTTCCTTTATTTACAAGAAATCCATTTGAAGCATTGTTGAGAAACGAAGGTCGAAATTTGAAGAGCCCACGGGAGTCGGAGAAGAAGCTACTTGAGAGTTCTGTTGACCCCCCAAGCCCGAAACTCTTTGTTGAGGGTGTGAACATAGTCCAGCCAGGTGAAGAGTCTCAATTAATGAGGAAAGAGAAGATAACGAAGCTTCAGAATAAAGCATCTAATGAAATTACTTATGTTCTCACACCCAATATTCACGCGTCATCAAGGATAGAAAGCTTACCCTTGGTATACCCTTTGGGAATCACCAAAAGTCTAGAACTCAAGTTAATCAGTCTCTCTCTCTCCAGAGAAGGGGAAGAGTGACTTTATAACATCAGTTGTCCCAAGTATGCAAAAAGTCTCTTACATCCCTTGTTCTCCCGAAAATTAAAAAAAAAAAAGAAGAGATCATATCTGTTGAAGCCTTTTCCAAGACATTTTGCACGAAAGAAGATTGACTTCATCAATTCCTGGTCTGCAATAGTAAACTCTGACTTGTTGGAAGATTGTTGTGTTCAATCGCAAATTCCAGCCATCACTCAAAAAAGGCAAGTTAATCCTATTTCCTCCAAACATCAATCTCATCACTCAATTCTTAAATTTTCAGATTCTAATGTTCAATTTGTGAGAGGTATTCCACAAGCCATTGTAAATACCTCATTCTAGACAACATGACACTGATGGTGATTCAATAGTGAGTGCAAGCAGTGAAGATTTTGATGGTCCTGAGGCAGAGGAGATTTGTGAAGAGGCAAAAAATGAGAATAGCTTCCGTAAAGATCTCCGTGAGCTTTTTCAAGAAGAGATTGTCCCTGAGCTTTTTCAAGAAGAGATTGTGAAGAGGCAGATTTTGGCTAGTCCACAGTTGAAATCCAGCCCTCGTTTGATTTGGAACAATGCTGTCAAAGCATTGTTAACGGATTTATGGTTTGAAAGAAATCAAAAGGTGTTTAACAATAAAGAAACTCCTTGGTTGGATTGATTCAAGTCAGCAAGACTTCATGCTTCCTCATGGTGTGCTCTTTCCAAATCATTTGAAGACTTCTTGGTTCAGAATATTTGTCTCAATTGGAGGGCATTCATACTTTCAGAGCTTTAGTTTTGGGTTTTTGTCTTGCTGTTTTGAGTAATGTCCTTATGTATTAGGGCCCAGTTTGTTTGTAGTTTTGTTTGTAGTTGGTTGTTTCAAAGTGAAAAACGTTTTGCCTCATTGTATTCGAGGTGTATTATTTGTTCTGTTGGACTGTTTGTTCTGACATTTGATATTTTGTTTTGTTCGCTTAGTTGGAGATGACGAGAGTGCTAAGGGGGTGTCAATATAGTTGAAATGTTCGAGTGCACTCGCTGATCCTTAGATTTGTATGCTCTTGTATCCCTCTTTGTAACTTGAGCATTAGTCTCAATTCATTTATTCAATAAAGAGGCCCTTTGGAAATCAAAAAGCTCAAGAAGGATAAACATTCTGGTTTGGATTTTAATTTTTGGGTCACTTAATTGCTCTGAAGTATTGCAACATAAATTTCATTTTCACTACATATCTCCCACCATCTGCCACTTATGTTCAGCAAGTAGCGAAGACCTTCAACATGTGTTCTTTGATTGTCCTTATTCAAGAAAATGCCGGGAGAAACTATTCTCATATTTCAATCTACATTTGGACAAAACATCAACAACATTATCTCCTATATTTTAACCGACTCTTTTTTGTCTCCAAAGTCACAAATTCTTTGGTCAAATGCGGTTAAAGCCTTGGTCTTAAAAATTTGGCTTCAGCGAAACCGACGAGTCTTCCACAACAAGGCTATTGATTGGTCAGACCGGTTTGGATCAGCTCGTTTGTTAGCCTCTTCTTGGTGCTCTCAGTCAAAGTTTTTTGTTGATTATTCTATTCAAGACATTTGTCTCAATTGGAATGCTTTTATATCTATGGATATGATGAGGGTGCTATGGGGTGTCAACCTAGTTGAGATGTCCTGGTGCACCTACTGATCCATAGTACTATGGTTATTACGATTATTGCTATGTATCATTATATTTTGAAGCTTTGTAATTTGTTTATTAGTTTCTTTTCATTATATCAATGAAAAGTTCATTTTTGTTTAAAAAAAAAAAAGAGATTCGTTTCCTTTTTTAAAAAAAAAAAGCTTCAAAGAAAAATCTCCTTAATATACAAGTTCTGCAAACCAAAACTAATGACTTCATCAATCTGATTTTGAAACTAAAACAAAGTCATCCCAACCTTGAGACCTATCCTTAGCAAAGGAAGAAACAACCACATTACCAAGAGACAAACAAAAGCAGGTTGCTTTGATTCTTGAATCAAGACCAAAATCGGAAGCTTTACTTTGAGAAAAAGATTTACTGCTGCTCTTTTAGACTTATCATCCAACCCTCGTGTGTTCCGAGAGATGACTTTCGAAACTCCTTGTAACAAAAATTTCAATTGACCAGCTGAGATGGTCTATAATGTGTCCTAATACTATTTTTTATCTTCTTTACTGGTGGGTCATCCTTTTGGTGGTATCAAGTGTATAATTTGGTTGGCCCTGCTGCATGTTTTCTTTTGGACTTTATGGGGTGAAAGAAATGGAAGGCTTTTTCGTGACTATTTTTCCAATTTTAGTAGATTTATGGAGTTGGTTTTGTCTATTGCTTTTTTTTTGGTGCAAAACAAAGCACCTTTTCGGTCATTATAGTTTATCATTTTTAGTCAACAATCGACAATCTCTTCTGTAATCACCTTTAGGTGTTTAGAGTTTTCTCGTGAATTCATTTATCAATGAAATGTCTCTTTTACAAATAAAAACCATTCAATGCTTTGGATTTTTCACTTTTGCAGTTTTTTTGGAGTTGGAGAGGATGATCAACATATTGGGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATCGGCTGGAGAAAACCAAATGTTTGGAGAAGTTCCGGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCGTCGAACATATCTTGTATAAAGTTGTTTAAGAAGCGCTTTCCTTTGGTGCATGATGATGTTTCGGATATTCAACATGCCCTGTATCCTTTCATTTTCTAGAATTTTTTTCCCACTATTCTGCTTCCCTCGGCCCCATCTTCTTCTTCTTCTTCTTCTTCCTCTTTTTTTTTTTTTTGGGTGGGGGAGTATACATGTCTTTATTCTCTTTTGATGCCTTGACTTGAGGGACCAGAATAATTACATTGGGATCTGACACATCTGGTGGATCAGTTTATATTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAACCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTCAATCTAGTGGAGATAGAGCTGTGATTGGTATGTTTCTTTTGTTCTCTGGATTCTTATTTATCACGTTGAATCCTTAA

mRNA sequence

AAAAAAAAAAAAAAAATAACATGATTGGTAATGGTATTACTAGAATTGATCGATCTTCGACCGGCGGTTTATTGCAGGCACGGCGAGTCGGTAGTCGGCATCGACACTTCCATTTCCCCTGCCCTTCCGAACTTCCGCCTCCAAAGTCCACCGCTTCAAAACTCTTCCGCTGTAAGATATACTTCGTAACGCTGCTTCCACCACCACTTTCTGAAAAATCATGCCACCAGATCTCCCTGGCTATTACTATGATGCCCAGAAGAACAGGTATTTCCCTCTCAAAGGCCCAATACCTGGTTCTTCTCGTACTTCTTCCTCATCCTCTTCAGCCCCTCATCATAAACGAGTTTCTAACTCCACTCCGACAGTCGATTCATGTTCGAAGACTGACTTAAGAACCGTGAAGCTGATTCAAGCCAGGGAGTTATATGGTGATGTTATTGCTTCCAGTACAGGAAAGTGTAACTTCAAGGAAAAATTCCAAAATTTACTGGCATCTAAACCAGTGGTTTGGAAATACCGAGGAACGGATACCATGGGGGATAGTGCTTTGCAAGAAATACCCATTAATGTAGACACCCTGGAGGGTCAAAGGGAATCTTCTGTTCTATTGACGGGCAACATAAGTGGCTCCTTGAGTTTTTTTGGAGTTGGAGAGGATGATCAACATATTGGGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATCGGCTGGAGAAAACCAAATGTTTGGAGAAGTTCCGGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCGTCGAACATATCTTGTATAAAGTTGTTTAAGAAGCGCTTTCCTTTGGTGCATGATGATGTTTCGGATATTCAACATGCCCTAATAATTACATTGGGATCTGACACATCTGGTGGATCAGTTTATATTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAACCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTCAATCTAGTGGAGATAGAGCTGTGATTGGTATGTTTCTTTTGTTCTCTGGATTCTTATTTATCACGTTGAATCCTTAA

Coding sequence (CDS)

ATGCCACCAGATCTCCCTGGCTATTACTATGATGCCCAGAAGAACAGGTATTTCCCTCTCAAAGGCCCAATACCTGGTTCTTCTCGTACTTCTTCCTCATCCTCTTCAGCCCCTCATCATAAACGAGTTTCTAACTCCACTCCGACAGTCGATTCATGTTCGAAGACTGACTTAAGAACCGTGAAGCTGATTCAAGCCAGGGAGTTATATGGTGATGTTATTGCTTCCAGTACAGGAAAGTGTAACTTCAAGGAAAAATTCCAAAATTTACTGGCATCTAAACCAGTGGTTTGGAAATACCGAGGAACGGATACCATGGGGGATAGTGCTTTGCAAGAAATACCCATTAATGTAGACACCCTGGAGGGTCAAAGGGAATCTTCTGTTCTATTGACGGGCAACATAAGTGGCTCCTTGAGTTTTTTTGGAGTTGGAGAGGATGATCAACATATTGGGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATCGGCTGGAGAAAACCAAATGTTTGGAGAAGTTCCGGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCGTCGAACATATCTTGTATAAAGTTGTTTAAGAAGCGCTTTCCTTTGGTGCATGATGATGTTTCGGATATTCAACATGCCCTAATAATTACATTGGGATCTGACACATCTGGTGGATCAGTTTATATTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAACCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTCAATCTAGTGGAGATAGAGCTGTGATTGGTATGTTTCTTTTGTTCTCTGGATTCTTATTTATCACGTTGAATCCTTAA

Protein sequence

MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRTVKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDTLEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIWQLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLDFNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIGMFLLFSGFLFITLNP

Homology

[Close]

BLAST of Lsi01G000100 vs. ExPASy TrEMBL
Match: A0A0A0KMD9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G538710 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.3e-141
Identity = 253/276 (91.67%), Postives = 258/276 (93.48%), Query Frame = 0


Query: 2   PPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRTV 61
           PPDLPGYYYDAQKNRYFPLKGPIPGSSR SSSSSSAPHHK  S+STPTV+S  K DLRTV
Sbjct: 4   PPDLPGYYYDAQKNRYFPLKGPIPGSSRASSSSSSAPHHKPPSDSTPTVNSYLKADLRTV 63

Query: 62  KLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDTL 121
           KLIQARELYGDVIASS  KCNFKEKFQNLLASKPV WKYRGTDTMGDSALQE+PINVDTL
Sbjct: 64  KLIQARELYGDVIASSKAKCNFKEKFQNLLASKPVFWKYRGTDTMGDSALQEMPINVDTL 123

Query: 122 EGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIWQ 181
           EGQRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSA ENQMFGEVPGDIWQ
Sbjct: 124 EGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSARENQMFGEVPGDIWQ 183

Query: 182 LSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLDF 241
           LSGASLQMSSNISCIKLFKKRFP VHD+VSDIQHALI TLGSD SGGSVYILNLVEPLDF
Sbjct: 184 LSGASLQMSSNISCIKLFKKRFPSVHDEVSDIQHALISTLGSDVSGGSVYILNLVEPLDF 243

Query: 242 NRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           NRTIPVIRRRIHEVASF+CSIWTADCQSSG RAVIG
Sbjct: 244 NRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIG 279

[Close]

BLAST of Lsi01G000100 vs. ExPASy TrEMBL
Match: A0A6J1ILI1 (uncharacterized protein LOC111478534 OS=Cucurbita maxima OX=3661 GN=LOC111478534 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.6e-141
Identity = 251/277 (90.61%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR S  TP VDSCSK DLR 
Sbjct: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPIVDSCSKADLRA 60

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIASS GK NFKEKFQNLLASKPVVWKYRGTD MGDSALQEIPINV T
Sbjct: 61  VKLIQARELYGDVIASSKGKWNFKEKFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQ ES+VLLTGNISGSLSFFGVGE DQHI RGVNCCPELVWP AGENQM  EVPGDIW
Sbjct: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNIS IKLFKKRFPLVHDDVSDIQHALI TLGSD+SGGSVY+LNLVEPLD
Sbjct: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNR+IPVIRRRIHEVASFNCSIWTADC+SSG RAVIG
Sbjct: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIG 277

[Close]

BLAST of Lsi01G000100 vs. ExPASy TrEMBL
Match: A0A1S3AZD8 (uncharacterized protein LOC103484236 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484236 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.3e-140
Identity = 249/277 (89.89%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           +P DLPGYYYDAQKNRYFPLKGPIPGSS  SSSSSSAPHHK VS+STPTV+S  K DLRT
Sbjct: 3   LPADLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRT 62

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIASS  +CNFKEKFQN LASKPV WK+RGTDTMGDSALQE+PINVDT
Sbjct: 63  VKLIQARELYGDVIASSKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDT 122

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSAGENQMFGEVPGDIW
Sbjct: 123 LEGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIW 182

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNISCIKLFKK  PL HDDVSDIQHALI TLGSD SGGSVYILNL+EPLD
Sbjct: 183 QLSGASLQMSSNISCIKLFKKCSPLAHDDVSDIQHALISTLGSDISGGSVYILNLIEPLD 242

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNRTIPVIRRRIHEVASFNCSIWTADCQSSG RAVIG
Sbjct: 243 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIG 279

[Close]

BLAST of Lsi01G000100 vs. ExPASy TrEMBL
Match: A0A1S3AYQ0 (uncharacterized protein LOC103484236 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484236 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.3e-140
Identity = 249/277 (89.89%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           +P DLPGYYYDAQKNRYFPLKGPIPGSS  SSSSSSAPHHK VS+STPTV+S  K DLRT
Sbjct: 3   LPADLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRT 62

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIASS  +CNFKEKFQN LASKPV WK+RGTDTMGDSALQE+PINVDT
Sbjct: 63  VKLIQARELYGDVIASSKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDT 122

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSAGENQMFGEVPGDIW
Sbjct: 123 LEGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIW 182

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNISCIKLFKK  PL HDDVSDIQHALI TLGSD SGGSVYILNL+EPLD
Sbjct: 183 QLSGASLQMSSNISCIKLFKKCSPLAHDDVSDIQHALISTLGSDISGGSVYILNLIEPLD 242

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNRTIPVIRRRIHEVASFNCSIWTADCQSSG RAVIG
Sbjct: 243 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIG 279

[Close]

BLAST of Lsi01G000100 vs. ExPASy TrEMBL
Match: A0A5A7UFC1 (DDB1-and CUL4-associated factor 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00100 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.7e-139
Identity = 248/274 (90.51%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 4   DLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRTVKL 63
           DLPGYYYDAQKNRYFPLKGPIPGSS  SSSSSSAPHHK VS+STPTV+S  K DLRTVKL
Sbjct: 12  DLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRTVKL 71

Query: 64  IQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDTLEG 123
           IQARELYGDVIAS   +CNFKEKFQN LASKPV WK+RGTDTMGDSALQE+PINVDTLEG
Sbjct: 72  IQARELYGDVIASGKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDTLEG 131

Query: 124 QRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIWQLS 183
           QRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSAGENQMFGEVPGDIWQLS
Sbjct: 132 QRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIWQLS 191

Query: 184 GASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLDFNR 243
           GASLQMSSNISCIKLFKK  PLVHDDVSDIQHALI TLGSD SGGSVYILNL+EPLDFNR
Sbjct: 192 GASLQMSSNISCIKLFKKCSPLVHDDVSDIQHALISTLGSDISGGSVYILNLIEPLDFNR 251

Query: 244 TIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           TIPVIRRRIHEVASFNCSIWTADCQSSG RAVIG
Sbjct: 252 TIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIG 285

[Close]

BLAST of Lsi01G000100 vs. NCBI nr
Match: XP_038877526.1 (uncharacterized protein LOC120069787 [Benincasa hispida])

HSP 1 Score: 529.3 bits (1362), Expect = 2.2e-146
Identity = 259/277 (93.50%), Postives = 264/277 (95.31%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           MPPDLPGYYYDAQKNRYF LKGP+PGSSRTSSSSSSAPHHKRVS STPTV+SCSK DLRT
Sbjct: 1   MPPDLPGYYYDAQKNRYFALKGPLPGSSRTSSSSSSAPHHKRVSKSTPTVNSCSKADLRT 60

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIAS  GKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQE  INVDT
Sbjct: 61  VKLIQARELYGDVIASGKGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQETSINVDT 120

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEG+RESSVLLTGNISGSLSFF VGE +QHIGRGVNCCPELVWPSAGENQM GEVPGD+W
Sbjct: 121 LEGKRESSVLLTGNISGSLSFFEVGEGNQHIGRGVNCCPELVWPSAGENQMVGEVPGDVW 180

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALI TLGSDTSGGSVYILNLVEPLD
Sbjct: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALISTLGSDTSGGSVYILNLVEPLD 240

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNRTIPVIRRRIHEVASFNCSIWTADCQS G RAVIG
Sbjct: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSCGGRAVIG 277

[Close]

BLAST of Lsi01G000100 vs. NCBI nr
Match: XP_004134515.2 (uncharacterized protein LOC101220880 isoform X1 [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 2.7e-141
Identity = 253/276 (91.67%), Postives = 258/276 (93.48%), Query Frame = 0


Query: 2   PPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRTV 61
           PPDLPGYYYDAQKNRYFPLKGPIPGSSR SSSSSSAPHHK  S+STPTV+S  K DLRTV
Sbjct: 4   PPDLPGYYYDAQKNRYFPLKGPIPGSSRASSSSSSAPHHKPPSDSTPTVNSYLKADLRTV 63

Query: 62  KLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDTL 121
           KLIQARELYGDVIASS  KCNFKEKFQNLLASKPV WKYRGTDTMGDSALQE+PINVDTL
Sbjct: 64  KLIQARELYGDVIASSKAKCNFKEKFQNLLASKPVFWKYRGTDTMGDSALQEMPINVDTL 123

Query: 122 EGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIWQ 181
           EGQRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSA ENQMFGEVPGDIWQ
Sbjct: 124 EGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSARENQMFGEVPGDIWQ 183

Query: 182 LSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLDF 241
           LSGASLQMSSNISCIKLFKKRFP VHD+VSDIQHALI TLGSD SGGSVYILNLVEPLDF
Sbjct: 184 LSGASLQMSSNISCIKLFKKRFPSVHDEVSDIQHALISTLGSDVSGGSVYILNLVEPLDF 243

Query: 242 NRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           NRTIPVIRRRIHEVASF+CSIWTADCQSSG RAVIG
Sbjct: 244 NRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIG 279

[Close]

BLAST of Lsi01G000100 vs. NCBI nr
Match: XP_022978597.1 (uncharacterized protein LOC111478534 [Cucurbita maxima])

HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140
Identity = 251/277 (90.61%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR S  TP VDSCSK DLR 
Sbjct: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPIVDSCSKADLRA 60

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIASS GK NFKEKFQNLLASKPVVWKYRGTD MGDSALQEIPINV T
Sbjct: 61  VKLIQARELYGDVIASSKGKWNFKEKFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQ ES+VLLTGNISGSLSFFGVGE DQHI RGVNCCPELVWP AGENQM  EVPGDIW
Sbjct: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNIS IKLFKKRFPLVHDDVSDIQHALI TLGSD+SGGSVY+LNLVEPLD
Sbjct: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNR+IPVIRRRIHEVASFNCSIWTADC+SSG RAVIG
Sbjct: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIG 277

[Close]

BLAST of Lsi01G000100 vs. NCBI nr
Match: XP_008439424.1 (PREDICTED: uncharacterized protein LOC103484236 isoform X2 [Cucumis melo])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 249/277 (89.89%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           +P DLPGYYYDAQKNRYFPLKGPIPGSS  SSSSSSAPHHK VS+STPTV+S  K DLRT
Sbjct: 3   LPADLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRT 62

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYGDVIASS  +CNFKEKFQN LASKPV WK+RGTDTMGDSALQE+PINVDT
Sbjct: 63  VKLIQARELYGDVIASSKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDT 122

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQRESSVLLTGNISGSLSFFGVG  DQHIG  VNCCPELVWPSAGENQMFGEVPGDIW
Sbjct: 123 LEGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIW 182

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNISCIKLFKK  PL HDDVSDIQHALI TLGSD SGGSVYILNL+EPLD
Sbjct: 183 QLSGASLQMSSNISCIKLFKKCSPLAHDDVSDIQHALISTLGSDISGGSVYILNLIEPLD 242

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNRTIPVIRRRIHEVASFNCSIWTADCQSSG RAVIG
Sbjct: 243 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIG 279

[Close]

BLAST of Lsi01G000100 vs. NCBI nr
Match: XP_023544797.1 (uncharacterized protein LOC111804281 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 249/277 (89.89%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           MPP+LPGYYYD QKNRYFPLKGPIPGSSRTSSSSSSAPHHKR S  TP VDSCSK DLR 
Sbjct: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           VKLIQARELYG+VIASS GK NFKE+FQNLLASKPVVWKYRGTD MGDSALQEIPINV T
Sbjct: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
           LEGQ ES+VLLTGNISGSLSFFGVGE DQHI RGVNCCPELVWP AGENQM  EVPGDIW
Sbjct: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQHALIITLGSDTSGGSVYILNLVEPLD 240
           QLSGASLQMSSNIS IKLFKKRFPLVHDDVSDIQHALI TLGSD+SGGSVY+LNLVEPLD
Sbjct: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240

Query: 241 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           FNR+IPVIRRRIHEVASFNCSIWTADC+SSG RAVIG
Sbjct: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIG 277

[Close]

BLAST of Lsi01G000100 vs. TAIR 10
Match: AT5G17370.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 6.3e-43
Identity = 105/281 (37.37%), Postives = 152/281 (54.09%), Query Frame = 0


Query: 1   MPPDLPGYYYDAQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRVSNSTPTVDSCSKTDLRT 60
           M P+LPG+YYD +KNRYFP+KGPIPG+    SSSSS    K         +   +T L+ 
Sbjct: 20  MKPELPGFYYDEEKNRYFPIKGPIPGA---KSSSSSRTKQKPEPKPEQETNYQKRTKLKA 79

Query: 61  VKLIQARELYGDVIASSTGKCNFKEKFQNLLASKPVVWKYRGTDTMGDSALQEIPINVDT 120
           +KL+ +REL G+VI+ +    NF+++ Q   AS PVVW+Y  T+ +GD+AL++  ++V T
Sbjct: 80  LKLVYSRELNGNVISVNKKMSNFRDEIQKTQASYPVVWRYGSTEDIGDTALKQFQVDVQT 139

Query: 121 LEGQRESSVLLTGNISGSLSFFGVGEDDQHIGRGVNCCPELVWPSAGENQMFGEVPGDIW 180
             G    ++L+ G+  G LS   V +D Q     + C P  V P    +    E P  I 
Sbjct: 140 PVGLTRKNILVAGSAGGCLSILRVSKDRQVYDGVIECDPVSVLPCKENDTEEREAPEHIL 199

Query: 181 QLSGASLQMSSNISCIKLFKKRFPLVHDDVSDIQH----ALIITLGSDTSGGSVYILNLV 240
           + +   L   S+IS I+L  +       D S+  H    ALI TLGS T  GS++ILN+ 
Sbjct: 200 RPTQPCLVALSSISSIELIGR------SDASENSHPVNRALITTLGS-TGRGSIFILNVA 259

Query: 241 EPLDFNRTIPVIRRRIHEVASFNCSIWTADCQSSGDRAVIG 278
           E ++      +  R +    S  C+IWT+DC  SG  A IG
Sbjct: 260 EEVNI-----LTPRSLQGNVSSECTIWTSDCNISGSHAAIG 285

The following BLAST results are available for this feature:

BLAST of Lsi01G000100 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G000100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMD9	1.3e-141	91.67	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A6J1ILI1	6.6e-141	90.61	uncharacterized protein LOC111478534 OS=Cucurbita maxima OX=3661 GN=LOC111478534...	[more]
A0A1S3AZD8	7.3e-140	89.89	uncharacterized protein LOC103484236 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3AYQ0	7.3e-140	89.89	uncharacterized protein LOC103484236 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UFC1	4.7e-139	90.51	DDB1-and CUL4-associated factor 4-like isoform X1 OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Lsi01G000100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877526.1	2.2e-146	93.50	uncharacterized protein LOC120069787 [Benincasa hispida]	[more]
XP_004134515.2	2.7e-141	91.67	uncharacterized protein LOC101220880 isoform X1 [Cucumis sativus]	[more]
XP_022978597.1	1.4e-140	90.61	uncharacterized protein LOC111478534 [Cucurbita maxima]	[more]
XP_008439424.1	1.5e-139	89.89	PREDICTED: uncharacterized protein LOC103484236 isoform X2 [Cucumis melo]	[more]
XP_023544797.1	1.5e-139	89.89	uncharacterized protein LOC111804281 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G000100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17370.1	6.3e-43	37.37	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..53
None	No IPR available	PANTHER	PTHR19845:SF13	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 12..278
None	No IPR available	PANTHER	PTHR19845	KATANIN P80 SUBUNIT	coord: 12..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G000100.1	Lsi01G000100.1	mRNA