Lcy13g014200 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g014200
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
LocationChr13: 30239576 .. 30240842 (-)
RNA-Seq ExpressionLcy13g014200
SyntenyLcy13g014200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTGACTGTTGATAATGCTAGTTCCAATGATACTGTTGTTGCTTTTCTTCTCAAAAGATTTAGTAAAGGGTTGTTGTTTAAGGGTGAATTTTTGCATGTTCGATGTTGTGCACATATACTAAATCTTATTGTATGTGATGCTTTGAAAGAACATCATGAGTGCATTGAAAGGATTCGCAATGCTATAAGATTTGTAAGGTCTTCTCCTGCACGTCTCTTGAAATTTAAGAAGTGTGCTGAAATTGAAAAAATTTCTTGCAAGAGTTTTGTATGTCTTGATGTTACTACTAGATTGAACTCAACTTATATGATGCTTGAGACAGCTAGTAAGTTTGAAAAAGCTTTTGACAGGTTAGAGGATGAAGATCCTATTTATAAGAATGATTCACCACCTACCAAAGATGATTGGGCAAATGCTAAGATGTTGGTTAGGTTTTTGAAAGTTTTTTTTTTTTATAATGTCACGTTAAAACTTTCAAGGTCTTTGAACACTACTTCGAATTTTATGTTTCATCAGATTTCTACAATTCATAATTGTATACTCTTGAATTCGAGGGGTTCAAATAAAATGCTTTCTAGTATGGCTAATGTGATGAAGGCCAAGTTTGAAAAGTATTGGGGGTTTGATGAGAGGAAGAACAATATTTTGTTGTATGTTGTTGTTGTGTTAGATCCTCGATTTAAATTGAAGTTATTATCATATTGTTTTGACAACTCATTTGGTCCAAAAATTCTAAAAGAATGACAACTTCAGTGGAGAATGTTTTGAGACGTCTCTTCATGAATATAGTACTGGAGTTGCATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTAGTAGTTGTGCTAGTGATAGTGTTACTGCTAGTGTTGATTTGAGATTTGATGATGAAATAATGGACCTAGATGAGGATGAAAACTTCAACTATGATATAATACCTCAGTTCAAAAGTGTTGAGACCACAAGTTTTGATAAAGAGTCAGAGATTGATGTATATTTGTTGGAAACTCTTGCTAAAGCTAGTAGTTCTTTTGACATACTTCATTGGTGGAAGCAGAATGGTCATCGGTTTGAGGTTCTCAGTTGTATGAGTAGCGATATATTGGCAATTCCAGTATCTACCGTAGCATCTGGGTTAGCTTTCAATACTGGAGGACATGTAGTCAACCCATCCCGTTGTTCTTCTTTGACTCCAAAGATGGTGGAGGCTCTTATATGCGCTAAAAATTGGCTAGACTCTAAACCGATATCATTAGATCTTTGA

mRNA sequence

ATGACCTTGACTGTTGATAATGCTAGTTCCAATGATACTGTTGTTGCTTTTCTTCTCAAAAGATTTAGTAAAGGGTTGTTGTTTAAGGGTGAATTTTTGCATGTTCGATGTTGTGCACATATACTAAATCTTATTGTATGTGATGCTTTGAAAGAACATCATGAGTGCATTGAAAGGATTCGCAATGCTATAAGATTTGTAAGGTCTTCTCCTGCACGTCTCTTGAAATTTAAGAAGTGTGCTGAAATTGAAAAAATTTCTTGCAAGAGTTTTGTATGTCTTGATGTTACTACTAGATTGAACTCAACTTATATGATGCTTGAGACAGCTAGTAAGTTTGAAAAAGCTTTTGACAGGTTAGAGGATGAAGATCCTATTTATAAGAATGATTCACCACCTACCAAAGATGATTGGGCAAATGCTAAGATGTTGGTTAGTACTGGAGTTGCATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTAGTAGTTGTGCTAGTGATAGTGTTACTGCTAGTGTTGATTTGAGATTTGATGATGAAATAATGGACCTAGATGAGGATGAAAACTTCAACTATGATATAATACCTCAGTTCAAAAGTGTTGAGACCACAAGTTTTGATAAAGAGTCAGAGATTGATGTATATTTGTTGGAAACTCTTGCTAAAGCTAGTAGTTCTTTTGACATACTTCATTGGTGGAAGCAGAATGGTCATCGGTTTGAGGTTCTCAGTTGTATGAGTAGCGATATATTGGCAATTCCAGTATCTACCGTAGCATCTGGGTTAGCTTTCAATACTGGAGGACATGTAGTCAACCCATCCCGTTGTTCTTCTTTGACTCCAAAGATGGTGGAGGCTCTTATATGCGCTAAAAATTGGCTAGACTCTAAACCGATATCATTAGATCTTTGA

Coding sequence (CDS)

ATGACCTTGACTGTTGATAATGCTAGTTCCAATGATACTGTTGTTGCTTTTCTTCTCAAAAGATTTAGTAAAGGGTTGTTGTTTAAGGGTGAATTTTTGCATGTTCGATGTTGTGCACATATACTAAATCTTATTGTATGTGATGCTTTGAAAGAACATCATGAGTGCATTGAAAGGATTCGCAATGCTATAAGATTTGTAAGGTCTTCTCCTGCACGTCTCTTGAAATTTAAGAAGTGTGCTGAAATTGAAAAAATTTCTTGCAAGAGTTTTGTATGTCTTGATGTTACTACTAGATTGAACTCAACTTATATGATGCTTGAGACAGCTAGTAAGTTTGAAAAAGCTTTTGACAGGTTAGAGGATGAAGATCCTATTTATAAGAATGATTCACCACCTACCAAAGATGATTGGGCAAATGCTAAGATGTTGGTTAGTACTGGAGTTGCATCTGTTAGTGTTAGTAGTGGGAGTGGTGGTAGTAGTTGTGCTAGTGATAGTGTTACTGCTAGTGTTGATTTGAGATTTGATGATGAAATAATGGACCTAGATGAGGATGAAAACTTCAACTATGATATAATACCTCAGTTCAAAAGTGTTGAGACCACAAGTTTTGATAAAGAGTCAGAGATTGATGTATATTTGTTGGAAACTCTTGCTAAAGCTAGTAGTTCTTTTGACATACTTCATTGGTGGAAGCAGAATGGTCATCGGTTTGAGGTTCTCAGTTGTATGAGTAGCGATATATTGGCAATTCCAGTATCTACCGTAGCATCTGGGTTAGCTTTCAATACTGGAGGACATGTAGTCAACCCATCCCGTTGTTCTTCTTTGACTCCAAAGATGGTGGAGGCTCTTATATGCGCTAAAAATTGGCTAGACTCTAAACCGATATCATTAGATCTTTGA

Protein sequence

MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERIRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRLEDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVSSGSGGSSCASDSVTASVDLRFDDEIMDLDEDENFNYDIIPQFKSVETTSFDKESEIDVYLLETLAKASSSFDILHWWKQNGHRFEVLSCMSSDILAIPVSTVASGLAFNTGGHVVNPSRCSSLTPKMVEALICAKNWLDSKPISLDL
Homology
BLAST of Lcy13g014200 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 118/406 (29.06%), Postives = 181/406 (44.58%), Query Frame = 0

Query: 2   TLTVDNASSNDTVVAFLLKRF---SKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIE 61
           T+T+DN  S+  + +  L+ +      L+ KG+   VRC AHILN +  D +   H  I 
Sbjct: 303 TITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIY 362

Query: 62  RIRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFD 121
            IR +I+F+++SP+R  KF + A   +I     +CLDVTT+ N+TY+ML  A  +++AF 
Sbjct: 363 NIRESIKFIKASPSREEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFS 422

Query: 122 RLEDEDPIYKNDSPPTKD---------------DWANAKMLVSTGVAS----------VS 181
            LE  D  Y N++P  +D               D A++ M  +   ++          + 
Sbjct: 423 TLETSDDNY-NEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLE 482

Query: 182 VSSGSGG-----SSCASD----------------SVTASVDLRF---------------- 241
           +S+ +G      SS A D                ++   +D RF                
Sbjct: 483 LSNATGHEDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVE 542

Query: 242 --------DDEIMDLDED------------------------ENFNYDIIP--------- 298
                   DD + +L ++                        EN      P         
Sbjct: 543 AAKYVKVVDDAVHELYKEYVAQPLPLTPAYVEQGDGNNAPASENGTQATAPSTGDGLVDF 602

BLAST of Lcy13g014200 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 115/406 (28.33%), Postives = 178/406 (43.84%), Query Frame = 0

Query: 2   TLTVDNASSNDTVVAFLLKRF---SKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIE 61
           T+T+DN  S+  + +  L+ +      L+ KG+   VRC AHILN +  D +   H  I 
Sbjct: 303 TITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIY 362

Query: 62  RIRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFD 121
            IR +I+F+++SP+   KF + A   +I     +CLDVTT+ N+TY+ML  A  +++AF 
Sbjct: 363 NIRESIKFIKASPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFS 422

Query: 122 RLEDEDPIYKNDSPPTKD---------------DWANAKMLVSTGVAS----------VS 181
            LE  D  Y N++P  +D               D A++ M  +   ++          + 
Sbjct: 423 TLETSDDNY-NEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLE 482

Query: 182 VSSGSGG-----SSCASD----------------SVTASVDLRF---------------- 241
           +S+ +G      SS A D                ++   +D RF                
Sbjct: 483 LSNATGREDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVE 542

Query: 242 --------DDEIMDLDED------------------------ENFNYDIIP--------- 298
                   DD + +L  +                        EN      P         
Sbjct: 543 AAKYVKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDF 602

BLAST of Lcy13g014200 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 4.6e-25
Identity = 107/394 (27.16%), Postives = 165/394 (41.88%), Query Frame = 0

Query: 3   LTVDNASSNDTVVAFL---LKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIER 62
           L++DNAS+N+  V  +   L+     L+  G F HVRC  HILNL+  D L      IE+
Sbjct: 364 LSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEK 423

Query: 63  IRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDR 122
           I+  +  V+SSP +  +  KCA    +     +  DV+TR NSTY+ML  A  ++ A  R
Sbjct: 424 IKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIR 483

Query: 123 LEDEDPIYKNDSPPTKDDWANA-------------------------------------- 182
           L+  DP   +   P  ++W  A                                      
Sbjct: 484 LKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDL 543

Query: 183 --------KMLVSTGVASVS--------VSSGSGGSSCASDSVTASVDLRF--------- 242
                   K ++     ++S        VS+ +   +C  D     + + F         
Sbjct: 544 IDQWCVHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDS 603

Query: 243 -------------------------------------DDEIMDLDEDENFNYDIIPQFKS 294
                                                DD +M+ ++DE  NY  + + K 
Sbjct: 604 YKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDSMDDTLMENEDDEFQNY--LHELKD 663

BLAST of Lcy13g014200 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.6e-24
Identity = 116/404 (28.71%), Postives = 171/404 (42.33%), Query Frame = 0

Query: 2   TLTVDN-ASSNDTVVAFLLKRFSK---GLLFKGEFLHVRCCAHILNLIVCDALKEHHECI 61
           T+T+DN  SS+D   A ++   S     ++ KG+   VRC AHILN +  D +   H  I
Sbjct: 343 TITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVI 402

Query: 62  ERIRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAF 121
             IR +I+F+++S     KF + A   +I     +CLDVTT+ N+TY+ML  A  +++ F
Sbjct: 403 YHIRESIKFIKASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVF 462

Query: 122 DRLEDEDPIYKNDSPPTKD---------------DWANAKMLVSTGVASV------SVSS 181
             LE  D  Y N++P T+D               D A+  M      +++       + S
Sbjct: 463 ASLETCDGDY-NEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQS 522

Query: 182 GSGGSSCASDSVTAS-------------------------VDLRF--------------- 241
               +    D +  S                         +D RF               
Sbjct: 523 ELSNAIAHEDPIFRSTAKIMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSV 582

Query: 242 ---------DDEIMDL--------------------------DEDENFNYDIIPQFKSVE 301
                    DD I +L                          + DE  ++DI   + S  
Sbjct: 583 EAAKYVKVVDDAIHELYSEYATQGEANRDAHVTDNSAAVTPPNGDELLDFDI---YLSEI 642

BLAST of Lcy13g014200 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 108/418 (25.84%), Postives = 165/418 (39.47%), Query Frame = 0

Query: 3   LTVDNASSNDTVVAFL---LKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIER 62
           L++DNAS+N+  V  +   L+     L+  G F HVRC  HILNL+  D L      IE+
Sbjct: 309 LSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEK 368

Query: 63  IRNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDR 122
           I+  +  V+SSP +  +  KCA    +     +  DV+TR NSTY+ML  A  ++ A  R
Sbjct: 369 IKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIR 428

Query: 123 LEDEDP------------------------------------------------------ 182
           L+  DP                                                      
Sbjct: 429 LKTSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKCLKKFFDLT 488

Query: 183 -------------IYKN--DSPPTKDDW-ANAKMLVSTGVASVS--------VSSGSGGS 242
                         YK   +     D W  + K ++     ++S        VS+ +   
Sbjct: 489 ELLSGTQYSTANLFYKGFCEIKDLIDQWCCHEKFVIRRMAVAMSEKFEKYWKVSNIALAV 548

Query: 243 SCASDSVTASVDLRF--------------------------------------------- 294
           +C  D     + + F                                             
Sbjct: 549 ACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDS 608

BLAST of Lcy13g014200 vs. ExPASy TrEMBL
Match: A0A5A7U7I9 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G001250 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.5e-90
Identity = 184/306 (60.13%), Postives = 224/306 (73.20%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLT+DNASSNDTVVA+LLK+F+KGL F GEFLHVRCCA IL LIV DA KEH++CI+RI
Sbjct: 526 MTLTIDNASSNDTVVAYLLKKFNKGLFFGGEFLHVRCCADILILIVTDAFKEHNDCIDRI 585

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFD+L
Sbjct: 586 RYAMRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDKL 645

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVSSGSGGSSCASDSVTASVDLRFDDEI 180
           EDED +Y++D  P K+DW NA++ +    ++    S  G   C+S S T++  +   D  
Sbjct: 646 EDEDALYRHDMSPNKEDWTNARICLFHEYSTTRSGSRQG---CSSTSTTSTQTVSGLDVN 705

Query: 181 MDLDEDEN----FNYD-IIPQFKSVETTSFDK-ESEIDVYLLETLAKASSSFDILHWWKQ 240
           +D D +EN    F YD I+ +F+   TT F++  SEID+YLLE   +    FDIL WWK 
Sbjct: 706 IDFDSNENMGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKM 765

Query: 241 NGHRFEVLSCMSSDILAIPVSTVASGLAFNTGGHVVNPSRCSSLTPKMVEALICAKNWLD 300
           N  RFEVL  M+ DILAIPV TVAS  AF+TGG VV+ SRC  L PK VEALIC +NWL+
Sbjct: 766 NSDRFEVLGQMARDILAIPVFTVASESAFSTGGRVVDSSRC-LLAPKTVEALICTQNWLN 825

BLAST of Lcy13g014200 vs. ExPASy TrEMBL
Match: A0A5D3CJE5 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00510 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 3.1e-85
Identity = 192/371 (51.75%), Postives = 226/371 (60.92%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 253 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 312

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFDRL
Sbjct: 313 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 372

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVSSGSGGSSCASDS------------- 180
           EDED  Y++D  P K+DW NA+ML+        V+    GS   + +             
Sbjct: 373 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCI 432

Query: 181 -------------------------------------VTASVDLR-------------FD 240
                                                V   +D R             FD
Sbjct: 433 RLNAGSRNALLVGMANNMKAKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFD 492

Query: 241 DEIMDLDED------ENFNYD-IIPQFKSVETTSFDK-ESEIDVYLLETLAKASSSFDIL 300
            E+ +  E+       +F YD I+ +FK   TT F +  SEID+YLLE   +    FDIL
Sbjct: 493 PEVAESMENVAEQCCRHFVYDTIVEEFKDDSTTPFKQGSSEIDIYLLEANVRTEGDFDIL 552

BLAST of Lcy13g014200 vs. ExPASy TrEMBL
Match: A0A5A7SRK8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00140 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 7.7e-84
Identity = 184/322 (57.14%), Postives = 217/322 (67.39%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 280 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 339

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV  R NSTYMMLE A +FEKAFDRL
Sbjct: 340 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPRRWNSTYMMLEAAVEFEKAFDRL 399

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVA----------------SVSVSSGSGGSSCA 180
           EDED  Y          W + ++  S  VA                  S +       C+
Sbjct: 400 EDEDASY-----ILLRTWFSIRLQWSRIVAESMGNVVEQCCRRLFHEYSTTQSGSRQGCS 459

Query: 181 SDSVTASVDLRFDDEIMDLDEDEN----FNYD-IIPQFKSVETTSFDK-ESEIDVYLLET 240
           S S T++  +   D  +D D +EN    F YD I+ +F+   TT F++  SEID+YLLE 
Sbjct: 460 STSTTSTQTVSGLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEA 519

Query: 241 LAKASSSFDILHWWKQNGHRFEVLSCMSSDILAIPVSTVASGLAFNTGGHVVNPSRCSSL 300
             +    FDIL WWK N  RFEVL  M+ DILAIPVSTVA   AF+TGG VV+ SRC SL
Sbjct: 520 NVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVAFESAFSTGGRVVDSSRC-SL 579

BLAST of Lcy13g014200 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 6.5e-83
Identity = 194/416 (46.63%), Postives = 230/416 (55.29%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 164 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 223

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFDRL
Sbjct: 224 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 283

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVS---------------------------------- 180
           EDED  Y++D  P K+DW NA+ML+                                   
Sbjct: 284 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCI 343

Query: 181 -----------TGVAS-------------------------------------------- 240
                       G+A+                                            
Sbjct: 344 RLNAGSANALLVGMANNMKAKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNFFG 403

Query: 241 ---------------------VSVSSGSGGSSCASDSVTASVDLRFDDEIMDLDEDEN-- 300
                                 S +       C+S S T++  +   D  +D D +EN  
Sbjct: 404 PEVAESMGNVVEQCCRRLFHEYSTTRSGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVG 463

BLAST of Lcy13g014200 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 6.5e-83
Identity = 194/416 (46.63%), Postives = 230/416 (55.29%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 215 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 274

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFDRL
Sbjct: 275 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 334

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVS---------------------------------- 180
           EDED  Y++D  P K+DW NA+ML+                                   
Sbjct: 335 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCI 394

Query: 181 -----------TGVAS-------------------------------------------- 240
                       G+A+                                            
Sbjct: 395 RLNAGSANALLVGMANNMKAKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKIFFG 454

Query: 241 ---------------------VSVSSGSGGSSCASDSVTASVDLRFDDEIMDLDEDEN-- 300
                                 S +       C+S S T++  +   D  +D D +EN  
Sbjct: 455 PEVAESMGNVVEQCCRRLFHEYSTTRSGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVG 514

BLAST of Lcy13g014200 vs. NCBI nr
Match: KAA0051170.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-89
Identity = 184/306 (60.13%), Postives = 224/306 (73.20%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLT+DNASSNDTVVA+LLK+F+KGL F GEFLHVRCCA IL LIV DA KEH++CI+RI
Sbjct: 526 MTLTIDNASSNDTVVAYLLKKFNKGLFFGGEFLHVRCCADILILIVTDAFKEHNDCIDRI 585

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFD+L
Sbjct: 586 RYAMRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDKL 645

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVSSGSGGSSCASDSVTASVDLRFDDEI 180
           EDED +Y++D  P K+DW NA++ +    ++    S  G   C+S S T++  +   D  
Sbjct: 646 EDEDALYRHDMSPNKEDWTNARICLFHEYSTTRSGSRQG---CSSTSTTSTQTVSGLDVN 705

Query: 181 MDLDEDEN----FNYD-IIPQFKSVETTSFDK-ESEIDVYLLETLAKASSSFDILHWWKQ 240
           +D D +EN    F YD I+ +F+   TT F++  SEID+YLLE   +    FDIL WWK 
Sbjct: 706 IDFDSNENMGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKM 765

Query: 241 NGHRFEVLSCMSSDILAIPVSTVASGLAFNTGGHVVNPSRCSSLTPKMVEALICAKNWLD 300
           N  RFEVL  M+ DILAIPV TVAS  AF+TGG VV+ SRC  L PK VEALIC +NWL+
Sbjct: 766 NSDRFEVLGQMARDILAIPVFTVASESAFSTGGRVVDSSRC-LLAPKTVEALICTQNWLN 825

BLAST of Lcy13g014200 vs. NCBI nr
Match: XP_038885835.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 326.2 bits (835), Expect = 2.9e-85
Identity = 182/339 (53.69%), Postives = 221/339 (65.19%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           +TLTVDNASSND  +A+LL+RF+KGLLF GEFLHVRCCAHILNLIVCDA KEH++CI RI
Sbjct: 49  ITLTVDNASSNDIAIAYLLRRFNKGLLFGGEFLHVRCCAHILNLIVCDAFKEHNDCINRI 108

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R  +RF+RSS  R LKFKKC EIEKISCKSFVCL+V TR NSTY+MLE   KFEKAFDRL
Sbjct: 109 RYVVRFIRSSSTRFLKFKKCIEIEKISCKSFVCLEVPTRWNSTYLMLEAVVKFEKAFDRL 168

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVS------------------------- 180
           EDED  Y++D  P K+DW NAKML+S     V ++                         
Sbjct: 169 EDEDASYRHDLSPNKEDWKNAKMLISANAMLVGMANSTRPNLRKVAKSMENVVEQCCRRL 228

Query: 181 -------SGSGGSSCASDSVTASVDLRFDDEIMDLDE----DENFNYDIIP-QFKSVETT 240
                  SGSG ++  +  + ++      + I+D D      E+F YD I   F+  ETT
Sbjct: 229 FHEYSNQSGSGSTTTINTPIVSA-----SETIIDCDPTEKVGEDFVYDTIGIDFEGDETT 288

Query: 241 SFDKESEIDVYLLETLAKASSSFDILHWWKQNGHRFEVLSCMSSDILAIPVSTVASGLAF 300
            F + SEID+YLLE   K    F+IL WWK N H+FEV S M+ DILAIP+STVA  L F
Sbjct: 289 PFKQGSEIDIYLLEANVKNEGDFNILQWWKMNSHQFEVPSRMARDILAIPISTVAYKLVF 348

Query: 301 NTGGHVVNPSRCSSLTPKMVEALICAKNWLDSKPISLDL 303
           ++GG V + S C SL PK VEALIC + WL S PI L++
Sbjct: 349 SSGGRVFDSSHC-SLAPKTVEALICTQIWLHSGPIDLEV 381

BLAST of Lcy13g014200 vs. NCBI nr
Match: TYK12117.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 6.4e-85
Identity = 192/371 (51.75%), Postives = 226/371 (60.92%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 253 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 312

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFDRL
Sbjct: 313 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 372

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVASVSVSSGSGGSSCASDS------------- 180
           EDED  Y++D  P K+DW NA+ML+        V+    GS   + +             
Sbjct: 373 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCI 432

Query: 181 -------------------------------------VTASVDLR-------------FD 240
                                                V   +D R             FD
Sbjct: 433 RLNAGSRNALLVGMANNMKAKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFD 492

Query: 241 DEIMDLDED------ENFNYD-IIPQFKSVETTSFDK-ESEIDVYLLETLAKASSSFDIL 300
            E+ +  E+       +F YD I+ +FK   TT F +  SEID+YLLE   +    FDIL
Sbjct: 493 PEVAESMENVAEQCCRHFVYDTIVEEFKDDSTTPFKQGSSEIDIYLLEANVRTEGDFDIL 552

BLAST of Lcy13g014200 vs. NCBI nr
Match: KAA0033842.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 1.6e-83
Identity = 184/322 (57.14%), Postives = 217/322 (67.39%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 280 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 339

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV  R NSTYMMLE A +FEKAFDRL
Sbjct: 340 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPRRWNSTYMMLEAAVEFEKAFDRL 399

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVSTGVA----------------SVSVSSGSGGSSCA 180
           EDED  Y          W + ++  S  VA                  S +       C+
Sbjct: 400 EDEDASY-----ILLRTWFSIRLQWSRIVAESMGNVVEQCCRRLFHEYSTTQSGSRQGCS 459

Query: 181 SDSVTASVDLRFDDEIMDLDEDEN----FNYD-IIPQFKSVETTSFDK-ESEIDVYLLET 240
           S S T++  +   D  +D D +EN    F YD I+ +F+   TT F++  SEID+YLLE 
Sbjct: 460 STSTTSTQTVSGLDANIDFDSNENVGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEA 519

Query: 241 LAKASSSFDILHWWKQNGHRFEVLSCMSSDILAIPVSTVASGLAFNTGGHVVNPSRCSSL 300
             +    FDIL WWK N  RFEVL  M+ DILAIPVSTVA   AF+TGG VV+ SRC SL
Sbjct: 520 NVRTEGDFDILQWWKMNSDRFEVLGQMARDILAIPVSTVAFESAFSTGGRVVDSSRC-SL 579

BLAST of Lcy13g014200 vs. NCBI nr
Match: TYK23433.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-82
Identity = 194/416 (46.63%), Postives = 230/416 (55.29%), Query Frame = 0

Query: 1   MTLTVDNASSNDTVVAFLLKRFSKGLLFKGEFLHVRCCAHILNLIVCDALKEHHECIERI 60
           MTLTVDNASSNDT VA+LLKRF+KGLLF GEFLHVRCCAHILNLIV DA KEH++CI+RI
Sbjct: 97  MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 156

Query: 61  RNAIRFVRSSPARLLKFKKCAEIEKISCKSFVCLDVTTRLNSTYMMLETASKFEKAFDRL 120
           R A+RF+RSSPAR LKFKKC E+EKI+CKS+VCLDV TR NSTYMMLE A KFEKAFDRL
Sbjct: 157 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 216

Query: 121 EDEDPIYKNDSPPTKDDWANAKMLVS---------------------------------- 180
           EDED  Y++D  P K+DW NA+ML+                                   
Sbjct: 217 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCI 276

Query: 181 -----------TGVAS-------------------------------------------- 240
                       G+A+                                            
Sbjct: 277 RLNAGSANALLVGMANNMKAKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKIFFG 336

Query: 241 ---------------------VSVSSGSGGSSCASDSVTASVDLRFDDEIMDLDEDEN-- 300
                                 S +       C+S S T++  +   D  +D D +EN  
Sbjct: 337 PEVAESMGNVVEQCCRRLFHEYSTTRSGSRQGCSSTSTTSTQTVSGLDANIDFDSNENVG 396

BLAST of Lcy13g014200 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0

Query: 200 VETTSFDKESEIDVYLLETLAKASSSFDILHWWKQNGHRFEVLSCMSSDILAIPVSTVAS 259
           +ETT  + +SE+D YL ETL      FD+L WWKQN  ++  LS M+ DIL+IPVS  A 
Sbjct: 582 METTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAF 641

Query: 260 GLAFNTGGHVVNPSRCSSLTPKMVEALICAKNWL 294
              F+     ++  + +SL P+ VEALICA+ WL
Sbjct: 642 DYVFDMEPREMDEYK-TSLRPETVEALICAREWL 674

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6AVI01.3e-2729.06Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
B9FJG31.2e-2528.33Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
P087704.6e-2527.16Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
Q75HY56.6e-2428.71Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
P030101.8e-2125.84Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7U7I95.5e-9060.13Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CJE53.1e-8551.75Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5A7SRK87.7e-8457.14Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CXI16.5e-8346.63Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3DAN86.5e-8346.63Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
Match NameE-valueIdentityDescription
KAA0051170.11.1e-8960.13zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
XP_038885835.12.9e-8553.69zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida][more]
TYK12117.16.4e-8551.75zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
KAA0033842.11.6e-8357.14zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
TYK23433.11.3e-8246.63putative transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT3G42170.11.2e-1545.74BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 210..293
e-value: 5.0E-22
score: 77.5
NoneNo IPR availablePANTHERPTHR23272:SF137ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKEcoord: 173..293
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 29..141
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 173..293
NoneNo IPR availablePANTHERPTHR23272:SF137ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKEcoord: 29..141
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 191..296
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g014200.1Lcy13g014200.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity