Lcy13g013090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g013090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr13: 19898591 .. 19900705 (+)
RNA-Seq Expression	Lcy13g013090
Synteny	Lcy13g013090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAACGCTTCTTCAGCTTCCCTCGAACCTTCTCCCGTCTCGCTGGTCCTTTACTTGGAATTGGGCACCACATGTCTTGTTCGACACATGCTCCACTGCCCCAACTCTCCGAGCTCGATGAAACCATGGCTTCAGTGCACTTCATTTCGTTAAACTCGTGCTTTTATCTCATGGGACTTTGCAGGAACATTGATACCCTCATCAAGTTCCATGGATTGCTCATAGTACACGGCCTTGTCGGCAACCTTCTTTGTGATACAAAGTTAGTCGGTGTTTATGGCGCACTTCGGGACGTGGCGTCTGCTCGCATGGTGTTCGATCAAATGCCCGACCCAGATTTTTATGCGTGGAAAGTGATGATTAGGTGGTATTTTTTGAACGACATGTTTGCAGATATTATTCCCTTCTATAATCGCATGAGAATGTCGTTTAAGGACTGTGATAATATTATTTTTTCGATTATCCTTAAAGCGTGTAGTGAATTTCGTGAAATTGATGAAGGGAGAAAGGTCCATTGCCAGATTGTAAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGCGAAATGTGGGCAGATTGAGTGCTCAAGCTCTGTGTTTGAAGGAATTATTGATAAGAATGTGGTTTCTTGGACTTCAATGATTGCGGGATATGTACAAAATGATTGTGCAGAGGAGGGTTTGGTTTTATTCAATCGGATGAGAGAGGCATTGGTTGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCGTGTGCAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTTCATGGCTATGCCATAAAGAACGTTGTTGAGCTTAGCTCTTTCTTAGCGACTGCTTTTTTAGACATGTATGTTAAATGTGGGCAAACTAGAGATGCTCGCATGATATTTGACGAGCTACCTACTATTGACCTCGTTTCATGGACTGCAATGATTGTTGGATATACACAAGCTGGCCAACCCAGCGAGGCGTTGAGGCTTTTCGCTGATGAAATAAGGTCTGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTCTCGTCGTGTTCAGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGGAATTAAACTTGGGCTCGAAGAGTGTGCAGTGAAGAATGCTCTTATTGATATGTATGCTAAATGCCATATGATTGATGATGCTTATGTTATATTTCATGGGATTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAATGGGTCTGCATATGAAGCCCTCCGGCTCTTTAATCAAATGAGATCAAACTCCTCTGCACCTGATGCAATAACACTTGTGAGCACCCTTTCAGCATCTGCCACCCTAGGTGCTGTACAGGTCGGTTCATCACTTCATGCTTACTCGATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGTGGCGATGCTAAATGTGCACGGATGGTGTTCGATAGTATGGGAGATAAGAACATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTCAAACCCAATGAAGTAATTTTCACGACAGTATTATCTGCTTGTAGCTATTCAGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCTATGAGTCAGGAATATAACTTTGCACCTTCCATGAAACACTATGCCTGTATGGTTGATCTTTTAGCTCGATCTGGTAGACTGGATGAAGCATTCGACTTTATTAAGAAAATGCCAGTTCAACCAGACATTAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATACTCGAGGTTTGATCTTGGAGAAGTGGTAGTCAGGGAAATACTACGACTTCATCCAAACGAAGCTTGCTATTATGTGCTTTTATCTAACCTGTATGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGGTGAGAGAGTTGATGCTACAGAGAGGATTGAACAAAGTTCCAGGGTTTAGCCTAGTAGAAACTAATGCAGGTGTGCTGTTTCATTAG

mRNA sequence

ATGTTGCAACGCTTCTTCAGCTTCCCTCGAACCTTCTCCCGTCTCGCTGGTCCTTTACTTGGAATTGGGCACCACATGTCTTGTTCGACACATGCTCCACTGCCCCAACTCTCCGAGCTCGATGAAACCATGGCTTCAGTGCACTTCATTTCGTTAAACTCGTGCTTTTATCTCATGGGACTTTGCAGGAACATTGATACCCTCATCAAGTTCCATGGATTGCTCATAGTACACGGCCTTGTCGGCAACCTTCTTTGTGATACAAAGTTAGTCGGTGTTTATGGCGCACTTCGGGACGTGGCGTCTGCTCGCATGGTGTTCGATCAAATGCCCGACCCAGATTTTTATGCGTGGAAAGTGATGATTAGGTGGTATTTTTTGAACGACATGTTTGCAGATATTATTCCCTTCTATAATCGCATGAGAATGTCGTTTAAGGACTGTGATAATATTATTTTTTCGATTATCCTTAAAGCGTGTAGTGAATTTCGTGAAATTGATGAAGGGAGAAAGGTCCATTGCCAGATTGTAAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGCGAAATGTGGGCAGATTGAGTGCTCAAGCTCTGTGTTTGAAGGAATTATTGATAAGAATGTGGTTTCTTGGACTTCAATGATTGCGGGATATGTACAAAATGATTGTGCAGAGGAGGGTTTGGTTTTATTCAATCGGATGAGAGAGGCATTGGTTGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCGTGTGCAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTTCATGGCTATGCCATAAAGAACGTTGTTGAGCTTAGCTCTTTCTTAGCGACTGCTTTTTTAGACATGTATGTTAAATGTGGGCAAACTAGAGATGCTCGCATGATATTTGACGAGCTACCTACTATTGACCTCGTTTCATGGACTGCAATGATTGTTGGATATACACAAGCTGGCCAACCCAGCGAGGCGTTGAGGCTTTTCGCTGATGAAATAAGGTCTGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTCTCGTCGTGTTCAGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGGAATTAAACTTGGGCTCGAAGAGTGTGCAGTGAAGAATGCTCTTATTGATATGTATGCTAAATGCCATATGATTGATGATGCTTATGTTATATTTCATGGGATTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAATGGGTCTGCATATGAAGCCCTCCGGCTCTTTAATCAAATGAGATCAAACTCCTCTGCACCTGATGCAATAACACTTGTGAGCACCCTTTCAGCATCTGCCACCCTAGGTGCTGTACAGGTCGGTTCATCACTTCATGCTTACTCGATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGTGGCGATGCTAAATGTGCACGGATGGTGTTCGATAGTATGGGAGATAAGAACATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTCAAACCCAATGAAGTAATTTTCACGACAGTATTATCTGCTTGTAGCTATTCAGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCTATGAGTCAGGAATATAACTTTGCACCTTCCATGAAACACTATGCCTGTATGGTTGATCTTTTAGCTCGATCTGGTAGACTGGATGAAGCATTCGACTTTATTAAGAAAATGCCAGTTCAACCAGACATTAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATACTCGAGGTTTGATCTTGGAGAAGTGGTAGTCAGGGAAATACTACGACTTCATCCAAACGAAGCTTGCTATTATGTGCTTTTATCTAACCTGTATGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGGTGAGAGAGTTGATGCTACAGAGAGGATTGAACAAAGTTCCAGGGTTTAGCCTAGTAGAAACTAATGCAGGTGTGCTGTTTCATTAG

Coding sequence (CDS)

ATGTTGCAACGCTTCTTCAGCTTCCCTCGAACCTTCTCCCGTCTCGCTGGTCCTTTACTTGGAATTGGGCACCACATGTCTTGTTCGACACATGCTCCACTGCCCCAACTCTCCGAGCTCGATGAAACCATGGCTTCAGTGCACTTCATTTCGTTAAACTCGTGCTTTTATCTCATGGGACTTTGCAGGAACATTGATACCCTCATCAAGTTCCATGGATTGCTCATAGTACACGGCCTTGTCGGCAACCTTCTTTGTGATACAAAGTTAGTCGGTGTTTATGGCGCACTTCGGGACGTGGCGTCTGCTCGCATGGTGTTCGATCAAATGCCCGACCCAGATTTTTATGCGTGGAAAGTGATGATTAGGTGGTATTTTTTGAACGACATGTTTGCAGATATTATTCCCTTCTATAATCGCATGAGAATGTCGTTTAAGGACTGTGATAATATTATTTTTTCGATTATCCTTAAAGCGTGTAGTGAATTTCGTGAAATTGATGAAGGGAGAAAGGTCCATTGCCAGATTGTAAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGCGAAATGTGGGCAGATTGAGTGCTCAAGCTCTGTGTTTGAAGGAATTATTGATAAGAATGTGGTTTCTTGGACTTCAATGATTGCGGGATATGTACAAAATGATTGTGCAGAGGAGGGTTTGGTTTTATTCAATCGGATGAGAGAGGCATTGGTTGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCGTGTGCAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTTCATGGCTATGCCATAAAGAACGTTGTTGAGCTTAGCTCTTTCTTAGCGACTGCTTTTTTAGACATGTATGTTAAATGTGGGCAAACTAGAGATGCTCGCATGATATTTGACGAGCTACCTACTATTGACCTCGTTTCATGGACTGCAATGATTGTTGGATATACACAAGCTGGCCAACCCAGCGAGGCGTTGAGGCTTTTCGCTGATGAAATAAGGTCTGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTCTCGTCGTGTTCAGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGGAATTAAACTTGGGCTCGAAGAGTGTGCAGTGAAGAATGCTCTTATTGATATGTATGCTAAATGCCATATGATTGATGATGCTTATGTTATATTTCATGGGATTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAATGGGTCTGCATATGAAGCCCTCCGGCTCTTTAATCAAATGAGATCAAACTCCTCTGCACCTGATGCAATAACACTTGTGAGCACCCTTTCAGCATCTGCCACCCTAGGTGCTGTACAGGTCGGTTCATCACTTCATGCTTACTCGATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGTGGCGATGCTAAATGTGCACGGATGGTGTTCGATAGTATGGGAGATAAGAACATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTCAAACCCAATGAAGTAATTTTCACGACAGTATTATCTGCTTGTAGCTATTCAGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCTATGAGTCAGGAATATAACTTTGCACCTTCCATGAAACACTATGCCTGTATGGTTGATCTTTTAGCTCGATCTGGTAGACTGGATGAAGCATTCGACTTTATTAAGAAAATGCCAGTTCAACCAGACATTAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATACTCGAGGTTTGATCTTGGAGAAGTGGTAGTCAGGGAAATACTACGACTTCATCCAAACGAAGCTTGCTATTATGTGCTTTTATCTAACCTGTATGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGGTGAGAGAGTTGATGCTACAGAGAGGATTGAACAAAGTTCCAGGGTTTAGCCTAGTAGAAACTAATGCAGGTGTGCTGTTTCATTAG

Protein sequence

MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVGGPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRMREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWNSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH

Homology

[Close]

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 766.5 bits (1978), Expect = 2.6e-220
Identity = 372/681 (54.63%), Postives = 495/681 (72.69%), Query Frame = 0


Query: 18  PLLGIGHHMSCSTHAPLPQLSELDET-MASVHFISLNSCFYLMGLCRNIDTLIKFHGLLI 77
           P    G    C +   + +L   +E   +S+H+ + + CF L+  C NID+L + HG+L 
Sbjct: 9   PTRRFGFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLT 68

Query: 78  VHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMIRWYFLNDMFADIIP 137
            +GL+G++   TKLV +YG       AR+VFDQ+P+PDFY WKVM+R Y LN    +++ 
Sbjct: 69  GNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVK 128

Query: 138 FYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVGGPDSFVLTGLIDMYAK 197
            Y+ +       D+I+FS  LKAC+E +++D G+K+HCQ+VKV   D+ VLTGL+DMYAK
Sbjct: 129 LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAK 188

Query: 198 CGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRMREALVESNQFTLGSI 257
           CG+I+ +  VF  I  +NVV WTSMIAGYV+ND  EEGLVLFNRMRE  V  N++T G++
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248

Query: 258 ITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDL 317
           I AC +L ALHQGKW HG  +K+ +ELSS L T+ LDMYVKCG   +AR +F+E   +DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308

Query: 318 VSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSCSVSGNLSLGMSVHGL 377
           V WTAMIVGYT  G  +EAL LF      ++ PN VT ASVLS C +  NL LG SVHGL
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368

Query: 378 GIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWNSMISGYAQNGSAYEAL 437
            IK+G+ +  V NAL+ MYAKC+   DA  +F    EKD++ WNS+ISG++QNGS +EAL
Sbjct: 369 SIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428

Query: 438 RLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKEG-LFSSNLYIGTALLN 497
            LF++M S S  P+ +T+ S  SA A+LG++ VGSSLHAYS+K G L SS++++GTALL+
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLD 488

Query: 498 FYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDFKPNEVI 557
           FYAKCGD + AR++FD++ +KN ITWSAMIGGYG QGD  GSL +F +MLK+  KPNE  
Sbjct: 489 FYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNEST 548

Query: 558 FTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLARSGRLDEAFDFIKKM 617
           FT++LSAC ++GMV EG +YF SM ++YNF PS KHY CMVD+LAR+G L++A D I+KM
Sbjct: 549 FTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608

Query: 618 PVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVLLSNLYASDGRWGQVN 677
           P+QPD+  +GAFLHGCG++SRFDLGE+V++++L LHP++A YYVL+SNLYASDGRW Q  
Sbjct: 609 PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAK 668

Query: 678 EVRELMLQRGLNKVPGFSLVE 697
           EVR LM QRGL+K+ G S +E
Sbjct: 669 EVRNLMKQRGLSKIAGHSTME 689

[Close]

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 5.9e-124
Identity = 234/643 (36.39%), Postives = 374/643 (58.16%), Query Frame = 0


Query: 58  LMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYA 117
           L+  C ++  L +   L+  +GL       TKLV ++     V  A  VF+ +       
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 118 WKVMIRWYFLNDMFADIIPFYNRMRMSFKDCDNII--FSIILKACSEFREIDEGRKVHCQ 177
           +  M++ +         + F+ RMR  + D + ++  F+ +LK C +  E+  G+++H  
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 162

Query: 178 IVKVG-GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEG 237
           +VK G   D F +TGL +MYAKC Q+  +  VF+ + ++++VSW +++AGY QN  A   
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 238 LVLFNRMREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDM 297
           L +   M E  ++ +  T+ S++ A + LR +  GK +HGYA+++  +    ++TA +DM
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 282

Query: 298 YVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTA 357
           Y KCG    AR +FD +   ++VSW +MI  Y Q   P EA+ +F   +   + P  V+ 
Sbjct: 283 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 342

Query: 358 ASVLSSCSVSGNLSLGMSVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVIFHGILE 417
              L +C+  G+L  G  +H L ++LGL+   +V N+LI MY KC  +D A  +F  +  
Sbjct: 343 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 402

Query: 418 KDVITWNSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSL 477
           + +++WN+MI G+AQNG   +AL  F+QMRS +  PD  T VS ++A A L        +
Sbjct: 403 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 462

Query: 478 HAYSIKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGD 537
           H   ++  L   N+++ TAL++ YAKCG    AR++FD M ++++ TW+AMI GYG  G 
Sbjct: 463 HGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 522

Query: 538 GSGSLAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYA 597
           G  +L +F +M K   KPN V F +V+SACS+SG+VE G + F  M + Y+   SM HY 
Sbjct: 523 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 582

Query: 598 CMVDLLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPN 657
            MVDLL R+GRL+EA+DFI +MPV+P +++YGA L  C ++   +  E     +  L+P+
Sbjct: 583 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 642

Query: 658 EACYYVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVE 697
           +  Y+VLL+N+Y +   W +V +VR  ML++GL K PG S+VE
Sbjct: 643 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.1e-117
Identity = 212/634 (33.44%), Postives = 372/634 (58.68%), Query Frame = 0


Query: 70  KFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMIRWYFLND 129
           K HG +I  G+  + + +T L+ +YG   +++ A  VFD MP  D  AW  ++     N 
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 130 MFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIV-KVGGPDSFVLT 189
                +  +  M     + D +    +++ C+E   +   R VH QI  K+   D  +  
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241

Query: 190 GLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRMREALVES 249
            L+ MY+KCG +  S  +FE I  KN VSWT+MI+ Y + + +E+ L  F+ M ++ +E 
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301

Query: 250 NQFTLGSIITACARLRALHQGKWVHGYAIKNVVELS-SFLATAFLDMYVKCGQTRDARMI 309
           N  TL S++++C  +  + +GK VHG+A++  ++ +   L+ A +++Y +CG+  D   +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361

Query: 310 FDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSCSVSGNL 369
              +   ++V+W ++I  Y   G   +AL LF   +   + P++ T AS +S+C  +G +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421

Query: 370 SLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWNSMISGYA 429
            LG  +HG  I+  + +  V+N+LIDMY+K   +D A  +F+ I  + V+TWNSM+ G++
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481

Query: 430 QNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKEGLFSSNL 489
           QNG++ EA+ LF+ M  +    + +T ++ + A +++G+++ G  +H   I  GL   +L
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDL 541

Query: 490 YIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKE 549
           +  TAL++ YAKCGD   A  VF +M  ++I++WS+MI  YG+ G    +++ F+ M++ 
Sbjct: 542 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 601

Query: 550 DFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLARSGRLDE 609
             KPNEV+F  VLSAC +SG VEEG +Y+ ++ + +  +P+ +H+AC +DLL+RSG L E
Sbjct: 602 GTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 661

Query: 610 AFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVLLSNLYAS 669
           A+  IK+MP   D S++G+ ++GC ++ + D+ + +  ++  +  ++  YY LLSN+YA 
Sbjct: 662 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 721

Query: 670 DGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGV 702
           +G W +   +R  M    L KVPG+S +E +  V
Sbjct: 722 EGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKV 752

[Close]

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-114
Identity = 226/644 (35.09%), Postives = 362/644 (56.21%), Query Frame = 0


Query: 63  RNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMI 122
           + +D  I+ +G +I   L       +KL  +Y    D+  A  VFD++       W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173

Query: 123 RWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG-G 182
                +  F+  I  + +M  S  + D+  FS + K+ S  R +  G ++H  I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233

Query: 183 PDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRM 242
             + V   L+  Y K  +++ +  VF+ + +++V+SW S+I GYV N  AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293

Query: 243 REALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQT 302
             + +E +  T+ S+   CA  R +  G+ VH   +K             LDMY KCG  
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353

Query: 303 RDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSC 362
             A+ +F E+    +VS+T+MI GY + G   EA++LF +     + P+  T  +VL+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413

Query: 363 SVSGNLSLGMSVHGLGIK---LGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVIT 422
           +    L  G  VH   IK   LG  +  V NAL+DMYAKC  + +A ++F  +  KD+I+
Sbjct: 414 ARYRLLDEGKRVHE-WIKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 473

Query: 423 WNSMISGYAQNGSAYEALRLFN-QMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYS 482
           WN++I GY++N  A EAL LFN  +     +PD  T+   L A A+L A   G  +H Y 
Sbjct: 474 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 533

Query: 483 IKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGS 542
           ++ G FS   ++  +L++ YAKCG    A M+FD +  K++++W+ MI GYG+ G G  +
Sbjct: 534 MRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 593

Query: 543 LAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVD 602
           +A+F+ M +   + +E+ F ++L ACS+SG+V+EGWR+F  M  E    P+++HYAC+VD
Sbjct: 594 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 653

Query: 603 LLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACY 662
           +LAR+G L +A+ FI+ MP+ PD +++GA L GC ++    L E V  ++  L P    Y
Sbjct: 654 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 713

Query: 663 YVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGV 702
           YVL++N+YA   +W QV  +R+ + QRGL K PG S +E    V
Sbjct: 714 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748

[Close]

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.6e-111
Identity = 217/606 (35.81%), Postives = 342/606 (56.44%), Query Frame = 0


Query: 99  DVASARMVFDQMPDPDFYAWKVMIRWYFLNDMFADIIPFYNRMR-MSFKDCDNIIFSIIL 158
           ++  A  VF +M + + ++W V++  Y     F + +  Y+RM  +     D   F  +L
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 203

Query: 159 KACSEFREIDEGRKVHCQIVKVGGP-DSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVV 218
           + C    ++  G++VH  +V+ G   D  V+  LI MY KCG ++ +  +F+ +  ++++
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 263

Query: 219 SWTSMIAGYVQNDCAEEGLVLFNRMREALVESNQFTLGSIITACARLRALHQGKWVHGYA 278
           SW +MI+GY +N    EGL LF  MR   V+ +  TL S+I+AC  L     G+ +H Y 
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323

Query: 279 IKNVVELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEAL 338
           I     +   +  +   MY+  G  R+A  +F  +   D+VSWT MI GY     P +A+
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383

Query: 339 RLFADEIRSDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLGIKLGL-EECAVKNALIDMY 398
             +    +  + P+ +T A+VLS+C+  G+L  G+ +H L IK  L     V N LI+MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443

Query: 399 AKCHMIDDAYVIFHGILEKDVITWNSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLV 458
           +KC  ID A  IFH I  K+VI+W S+I+G   N   +EAL    QM+  +  P+AITL 
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLT 503

Query: 459 STLSASATLGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGD 518
           + L+A A +GA+  G  +HA+ ++ G+   + ++  ALL+ Y +CG    A   F+S   
Sbjct: 504 AALAACARIGALMCGKEIHAHVLRTGVGLDD-FLPNALLDMYVRCGRMNTAWSQFNSQ-K 563

Query: 519 KNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRY 578
           K++ +W+ ++ GY  +G GS  + +F  M+K   +P+E+ F ++L  CS S MV +G  Y
Sbjct: 564 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 623

Query: 579 FKSMSQEYNFAPSMKHYACMVDLLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYS 638
           F  M ++Y   P++KHYAC+VDLL R+G L EA  FI+KMPV PD +++GA L+ C ++ 
Sbjct: 624 FSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 683

Query: 639 RFDLGEVVVREILRLHPNEACYYVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLV 698
           + DLGE+  + I  L      YY+LL NLYA  G+W +V +VR +M + GL    G S V
Sbjct: 684 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 743

Query: 699 ETNAGV 702
           E    V
Sbjct: 744 EVKGKV 745

[Close]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL
Match: A0A6J1KBI2 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492392 PE=4 SV=1)

HSP 1 Score: 1305.8 bits (3378), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 672/704 (95.45%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSF++CDNIIFSIILKAC E REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIECSS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV+ELSSFLATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           TRDARMIFDELPTIDLVSWTAMIVGYTQAGQP+EAL LF D+IRS LLPNSVTAAS+LS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNLS+GMSVHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGY QNGSAY+ALRLFNQMRS+S APDAITLVSTLSASA LGAVQ+GSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPN+VIFTTVLSACSYSGMVEEGW+YFKSMSQ+YN+APSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRL+EA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEAC YVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 704

[Close]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL
Match: A0A6J1GZK8 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458927 PE=4 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 637/705 (90.35%), Postives = 672/705 (95.32%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFK+CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIECSS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVV-ELSSFLATAFLDMYVKCG 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV+ EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLS 360
           QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQP+EALRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITW 420
           +CSVSGNLS+GM VHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+ALRLFNQMRS+S APDAITLVS LSASA LGAVQVGSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLL 600
           IFSDMLKED KPN+VIFTTVLSACSYSGMVEEGWRYFKSMSQ+YN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYV 660
           +RSGRL+EA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEA  YV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660

Query: 661 LLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LLSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 705

[Close]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL
Match: A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)

HSP 1 Score: 1284.6 bits (3323), Expect = 0.0e+00
Identity = 628/704 (89.20%), Postives = 662/704 (94.03%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FS L G LL +GH MS ST+A  P LS+L +TM SV FISL+SC YLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGAL DV SARMVFDQMPDPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F D+IPFYN MRMSF++CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFV+TGLIDMY KC Q+ECSS+VFE I+DKNVVSWTSMIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MR+ALVESN FTLGSII AC +LRALHQGKWVHGYAIKN+VE SSFLAT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           TRDARMIFDELPTIDLVSWTAMIVGYTQA QP++ LRLFADEIRSDLLPNSVTAASVLS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNL+LGMSVHGLGIKLGLEECAVKNALIDMYAKCH I DAYVIFHG+LEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAY+ALRLFNQMRS S APDAITLVSTLSASATLGAVQVGSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAK AR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPNEVIFTT+LSACS SGMVEEGWRYFKSM Q+YNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRLDEA DFIKKMPVQPD+SLYGAFLHGCGLYSRFDLGEVVVRE+L+LHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LSNLYASDG+WGQVNEVR+LMLQRGLNKVPG+SLVETNAGVLFH
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNAGVLFH 704

[Close]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL
Match: A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)

HSP 1 Score: 1273.8 bits (3295), Expect = 0.0e+00
Identity = 623/699 (89.13%), Postives = 657/699 (93.99%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FS L G LL +GH MS ST+A  P LS+L +TM SV FISL+SC YLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGAL DV SARMVFDQMPDPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F D+IPFYN MRMSF++CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFV+TGLIDMY KC Q+ECSS+VFE I+DKNVVSWTSMIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MR+ALVESN FTLGSII AC +LRALHQGKWVHGYAIKN+VE SSFLAT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           TRDARMIFDELPTIDLVSWTAMIVGYTQA QP++ LRLFADEIRSDLLPNSVTAASVLS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNL+LGMSVHGLGIKLGLEECAVKNALIDMYAKCH I DAYVIFHG+LEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAY+ALRLFNQMRS S APDAITLVSTLSASATLGAVQVGSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAK AR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPNEVIFTT+LSACS SGMVEEGWRYFKSM Q+YNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRLDEA DFIKKMPVQPD+SLYGAFLHGCGLYSRFDLGEVVVRE+L+LHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNA 700
           LSNLYASDG+WGQVNEVR+LMLQRGLNKVPG+SLVETNA
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 699

[Close]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL
Match: A0A6J1DCB9 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018771 PE=4 SV=1)

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 630/704 (89.49%), Postives = 662/704 (94.03%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRF S  R+FSRLAG L+ +G +M CST+ P PQLSELD+TMASV FISLNS FYLMG
Sbjct: 1   MLQRFLSLRRSFSRLAGSLIELG-NMYCSTYPPQPQLSELDQTMASVQFISLNSSFYLMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SAR+VFDQMPD DFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVDSARLVFDQMPDRDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFADIIPFYN MRMSF + DNIIFSIILKACSE REI EGRKVH QIVKVG
Sbjct: 121 MIRWYFLNDMFADIIPFYNSMRMSFTESDNIIFSIILKACSELREIVEGRKVHGQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGL+DMYAKCGQIECS +VFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLVDMYAKCGQIECSCAVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MR ALVESNQFTLGSIITAC +LRALHQGKWVHGYAIKNVV+LS+FL T FLDMYVKCGQ
Sbjct: 241 MRAALVESNQFTLGSIITACTKLRALHQGKWVHGYAIKNVVKLSAFLTTTFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           TRDAR++FDELPTID VSWTAMIVGYTQAGQP+EALRLFA EIRSDLLPNSVTAA+VLSS
Sbjct: 301 TRDARIMFDELPTIDRVSWTAMIVGYTQAGQPNEALRLFAGEIRSDLLPNSVTAATVLSS 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNL+LGMSVHGLGIKLGLEEC VKNALIDMYAKCHMID+AYVIFHG+LEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECGVKNALIDMYAKCHMIDEAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGYAQNG+A EAL LFNQMRS+S+APDAITLVS LSASATLGAV VGSSLHAYSIK 
Sbjct: 421 SMISGYAQNGTANEALLLFNQMRSSSAAPDAITLVSALSASATLGAVHVGSSLHAYSIKV 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFS NLYIGT LLNFYAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSLNLYIGTTLLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPNEVIFTTVLSACSYSGMV EGWRYFKSMSQ+YNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDVKPNEVIFTTVLSACSYSGMVAEGWRYFKSMSQDYNFMPSMKHYACMVDLLA 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRLDEA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVV+E+L+LHP+EACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVKEMLQLHPDEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LSNLYASDGRWGQVN+VRELM QRGLNK PG+SLVET+AG+LFH
Sbjct: 661 LSNLYASDGRWGQVNQVRELMQQRGLNKDPGYSLVETDAGMLFH 703

[Close]

BLAST of Lcy13g013090 vs. NCBI nr
Match: XP_022997487.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997497.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997504.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997514.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997519.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997526.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997533.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1305.8 bits (3378), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 672/704 (95.45%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSF++CDNIIFSIILKAC E REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIECSS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV+ELSSFLATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           TRDARMIFDELPTIDLVSWTAMIVGYTQAGQP+EAL LF D+IRS LLPNSVTAAS+LS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNLS+GMSVHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGY QNGSAY+ALRLFNQMRS+S APDAITLVSTLSASA LGAVQ+GSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPN+VIFTTVLSACSYSGMVEEGW+YFKSMSQ+YN+APSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRL+EA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEAC YVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 704

[Close]

BLAST of Lcy13g013090 vs. NCBI nr
Match: KAG7032406.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1300.0 bits (3363), Expect = 0.0e+00
Identity = 636/705 (90.21%), Postives = 675/705 (95.74%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFK+CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIECSS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNV-VELSSFLATAFLDMYVKCG 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV +EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLS 360
           QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQP++ALRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITW 420
           +CSVSGNLS+GM VHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+ALRLFNQM+S+S APDAITLVS LSASA LGAVQVGSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLL 600
           IFSDMLKED KPN+VIFTTVLSACSYSGMVEEGWRYFKSMSQ+YN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYV 660
           +RSGRL+EA +FIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEAC+YV
Sbjct: 601 SRSGRLEEALEFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACFYV 660

Query: 661 LLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LLSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 705

[Close]

BLAST of Lcy13g013090 vs. NCBI nr
Match: XP_022957571.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957572.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957573.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957574.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957575.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957577.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957578.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 637/705 (90.35%), Postives = 672/705 (95.32%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFK+CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIECSS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVV-ELSSFLATAFLDMYVKCG 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV+ EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLS 360
           QTRDARMIFDELP+IDLVSWTAMIVGY+QAGQP+EALRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITW 420
           +CSVSGNLS+GM VHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+ALRLFNQMRS+S APDAITLVS LSASA LGAVQVGSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLL 600
           IFSDMLKED KPN+VIFTTVLSACSYSGMVEEGWRYFKSMSQ+YN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYV 660
           +RSGRL+EA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEA  YV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660

Query: 661 LLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LLSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 705

[Close]

BLAST of Lcy13g013090 vs. NCBI nr
Match: XP_038893238.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa hispida])

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 634/704 (90.06%), Postives = 667/704 (94.74%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFF+ PR FSRLAGPLL +GHHMS   +A  P LS+L +TMAS   ISL+SCFYL+G
Sbjct: 1   MLQRFFNLPRAFSRLAGPLLQMGHHMSYCAYASHPPLSDLHQTMASAQSISLHSCFYLIG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LC+NIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQMPDPDFYAWKV
Sbjct: 61  LCKNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMPDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F DIIPFYNRMRMSF++CD IIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDIIPFYNRMRMSFRECDKIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIE SS VFE I+DKNVVSWTSMIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIESSSVVFEEIVDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQ 300
           MREALVESN FTLGSIITAC +LRALHQGKWVHGYAIKN++ELSSFLATAFLDMYVKCGQ
Sbjct: 241 MREALVESNPFTLGSIITACTKLRALHQGKWVHGYAIKNMMELSSFLATAFLDMYVKCGQ 300

Query: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSS 360
           T+DARMIFDELPTIDLVSWTAM+VGYTQ GQP+EALRLFADEIRS LLPNSVTAASVLSS
Sbjct: 301 TKDARMIFDELPTIDLVSWTAMVVGYTQVGQPNEALRLFADEIRSGLLPNSVTAASVLSS 360

Query: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWN 420
           CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMY+KCHMIDDAYVIF G+LEKDVITWN
Sbjct: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYSKCHMIDDAYVIFRGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAYE+LRLFN MRS+  APDAITLVSTLSASAT+GAVQVGSSLHAYSIKE
Sbjct: 421 SMISGYAQNGSAYESLRLFNLMRSDYLAPDAITLVSTLSASATIGAVQVGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAK ARMVFD MGDKNIITWSAMIGGYGVQGDGSGSL++
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDGMGDKNIITWSAMIGGYGVQGDGSGSLSV 540

Query: 541 FSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLA 600
           FSDMLKED KPNEVIFTTVLSACSYSGMVEEGWRYFKSM Q+YNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTVLSACSYSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVL 660
           RSGRLDEA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVRE+L+LHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LSNLYASDGRWGQVNEVR+LMLQRGLNKVPG+S+VE+N GVLFH
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLQRGLNKVPGYSIVESNEGVLFH 704

[Close]

BLAST of Lcy13g013090 vs. NCBI nr
Match: XP_023540052.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540134.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540211.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540287.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1291.9 bits (3342), Expect = 0.0e+00
Identity = 636/705 (90.21%), Postives = 670/705 (95.04%), Query Frame = 0


Query: 1   MLQRFFSFPRTFSRLAGPLLGIGHHMSCSTHAPLPQLSELDETMASVHFISLNSCFYLMG 60
           MLQRFFS PR FSRLAGPLL +GHH+S ST+A  P LS+LD+TMASV FISL+SCFY MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGAL DV SARMVFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA IIPFYNRMRMSFK+CDNIIFSIILKACSE REIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMY KCGQIE SS+VFEGIIDKNVVSWT+MIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNV-VELSSFLATAFLDMYVKCG 300
           MRE+LVESNQFTLGSIITAC RLRALHQGKWVHGYAIKNV +EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLS 360
           QTRDA MIFDELP+IDLVSWTAMIVGY+QAGQP+EALRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITW 420
           +CSVSGNLS+GM VHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYV+F G+LEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+ALRLFNQMRS+S APDAITLVS LSASA LGAVQVGSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAK ARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLL 600
           IFSDMLKED KPN+VIFTTVLSACSYSGMVEEGWRYFKSMSQ+YN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYV 660
           +RSGRL+EA DFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEV+VRE+L LHPNEA  YV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660

Query: 661 LLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGVLFH 705
           LLSNLYASDGRWGQVNEVR+LML+RGL KVPG+SLVETNAGV FH
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAGVPFH 705

[Close]

BLAST of Lcy13g013090 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 766.5 bits (1978), Expect = 1.8e-221
Identity = 372/681 (54.63%), Postives = 495/681 (72.69%), Query Frame = 0


Query: 18  PLLGIGHHMSCSTHAPLPQLSELDET-MASVHFISLNSCFYLMGLCRNIDTLIKFHGLLI 77
           P    G    C +   + +L   +E   +S+H+ + + CF L+  C NID+L + HG+L 
Sbjct: 9   PTRRFGFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLT 68

Query: 78  VHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMIRWYFLNDMFADIIP 137
            +GL+G++   TKLV +YG       AR+VFDQ+P+PDFY WKVM+R Y LN    +++ 
Sbjct: 69  GNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVK 128

Query: 138 FYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVGGPDSFVLTGLIDMYAK 197
            Y+ +       D+I+FS  LKAC+E +++D G+K+HCQ+VKV   D+ VLTGL+DMYAK
Sbjct: 129 LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAK 188

Query: 198 CGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRMREALVESNQFTLGSI 257
           CG+I+ +  VF  I  +NVV WTSMIAGYV+ND  EEGLVLFNRMRE  V  N++T G++
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248

Query: 258 ITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDL 317
           I AC +L ALHQGKW HG  +K+ +ELSS L T+ LDMYVKCG   +AR +F+E   +DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308

Query: 318 VSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSCSVSGNLSLGMSVHGL 377
           V WTAMIVGYT  G  +EAL LF      ++ PN VT ASVLS C +  NL LG SVHGL
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368

Query: 378 GIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWNSMISGYAQNGSAYEAL 437
            IK+G+ +  V NAL+ MYAKC+   DA  +F    EKD++ WNS+ISG++QNGS +EAL
Sbjct: 369 SIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428

Query: 438 RLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKEG-LFSSNLYIGTALLN 497
            LF++M S S  P+ +T+ S  SA A+LG++ VGSSLHAYS+K G L SS++++GTALL+
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLD 488

Query: 498 FYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDFKPNEVI 557
           FYAKCGD + AR++FD++ +KN ITWSAMIGGYG QGD  GSL +F +MLK+  KPNE  
Sbjct: 489 FYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNEST 548

Query: 558 FTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLARSGRLDEAFDFIKKM 617
           FT++LSAC ++GMV EG +YF SM ++YNF PS KHY CMVD+LAR+G L++A D I+KM
Sbjct: 549 FTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608

Query: 618 PVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVLLSNLYASDGRWGQVN 677
           P+QPD+  +GAFLHGCG++SRFDLGE+V++++L LHP++A YYVL+SNLYASDGRW Q  
Sbjct: 609 PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAK 668

Query: 678 EVRELMLQRGLNKVPGFSLVE 697
           EVR LM QRGL+K+ G S +E
Sbjct: 669 EVRNLMKQRGLSKIAGHSTME 689

[Close]

BLAST of Lcy13g013090 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 446.4 bits (1147), Expect = 4.2e-125
Identity = 234/643 (36.39%), Postives = 374/643 (58.16%), Query Frame = 0


Query: 58  LMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYA 117
           L+  C ++  L +   L+  +GL       TKLV ++     V  A  VF+ +       
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 118 WKVMIRWYFLNDMFADIIPFYNRMRMSFKDCDNII--FSIILKACSEFREIDEGRKVHCQ 177
           +  M++ +         + F+ RMR  + D + ++  F+ +LK C +  E+  G+++H  
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 162

Query: 178 IVKVG-GPDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEG 237
           +VK G   D F +TGL +MYAKC Q+  +  VF+ + ++++VSW +++AGY QN  A   
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 238 LVLFNRMREALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDM 297
           L +   M E  ++ +  T+ S++ A + LR +  GK +HGYA+++  +    ++TA +DM
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 282

Query: 298 YVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTA 357
           Y KCG    AR +FD +   ++VSW +MI  Y Q   P EA+ +F   +   + P  V+ 
Sbjct: 283 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 342

Query: 358 ASVLSSCSVSGNLSLGMSVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVIFHGILE 417
              L +C+  G+L  G  +H L ++LGL+   +V N+LI MY KC  +D A  +F  +  
Sbjct: 343 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 402

Query: 418 KDVITWNSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSL 477
           + +++WN+MI G+AQNG   +AL  F+QMRS +  PD  T VS ++A A L        +
Sbjct: 403 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 462

Query: 478 HAYSIKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGD 537
           H   ++  L   N+++ TAL++ YAKCG    AR++FD M ++++ TW+AMI GYG  G 
Sbjct: 463 HGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 522

Query: 538 GSGSLAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYA 597
           G  +L +F +M K   KPN V F +V+SACS+SG+VE G + F  M + Y+   SM HY 
Sbjct: 523 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 582

Query: 598 CMVDLLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPN 657
            MVDLL R+GRL+EA+DFI +MPV+P +++YGA L  C ++   +  E     +  L+P+
Sbjct: 583 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 642

Query: 658 EACYYVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVE 697
           +  Y+VLL+N+Y +   W +V +VR  ML++GL K PG S+VE
Sbjct: 643 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of Lcy13g013090 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 2.9e-118
Identity = 212/634 (33.44%), Postives = 372/634 (58.68%), Query Frame = 0


Query: 70  KFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMIRWYFLND 129
           K HG +I  G+  + + +T L+ +YG   +++ A  VFD MP  D  AW  ++     N 
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 130 MFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIV-KVGGPDSFVLT 189
                +  +  M     + D +    +++ C+E   +   R VH QI  K+   D  +  
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241

Query: 190 GLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRMREALVES 249
            L+ MY+KCG +  S  +FE I  KN VSWT+MI+ Y + + +E+ L  F+ M ++ +E 
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301

Query: 250 NQFTLGSIITACARLRALHQGKWVHGYAIKNVVELS-SFLATAFLDMYVKCGQTRDARMI 309
           N  TL S++++C  +  + +GK VHG+A++  ++ +   L+ A +++Y +CG+  D   +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361

Query: 310 FDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSCSVSGNL 369
              +   ++V+W ++I  Y   G   +AL LF   +   + P++ T AS +S+C  +G +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421

Query: 370 SLGMSVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVITWNSMISGYA 429
            LG  +HG  I+  + +  V+N+LIDMY+K   +D A  +F+ I  + V+TWNSM+ G++
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481

Query: 430 QNGSAYEALRLFNQMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYSIKEGLFSSNL 489
           QNG++ EA+ LF+ M  +    + +T ++ + A +++G+++ G  +H   I  GL   +L
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDL 541

Query: 490 YIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKE 549
           +  TAL++ YAKCGD   A  VF +M  ++I++WS+MI  YG+ G    +++ F+ M++ 
Sbjct: 542 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 601

Query: 550 DFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVDLLARSGRLDE 609
             KPNEV+F  VLSAC +SG VEEG +Y+ ++ + +  +P+ +H+AC +DLL+RSG L E
Sbjct: 602 GTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 661

Query: 610 AFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACYYVLLSNLYAS 669
           A+  IK+MP   D S++G+ ++GC ++ + D+ + +  ++  +  ++  YY LLSN+YA 
Sbjct: 662 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 721

Query: 670 DGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGV 702
           +G W +   +R  M    L KVPG+S +E +  V
Sbjct: 722 EGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKV 752

[Close]

BLAST of Lcy13g013090 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 415.2 bits (1066), Expect = 1.0e-115
Identity = 226/644 (35.09%), Postives = 362/644 (56.21%), Query Frame = 0


Query: 63  RNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALRDVASARMVFDQMPDPDFYAWKVMI 122
           + +D  I+ +G +I   L       +KL  +Y    D+  A  VFD++       W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173

Query: 123 RWYFLNDMFADIIPFYNRMRMSFKDCDNIIFSIILKACSEFREIDEGRKVHCQIVKVG-G 182
                +  F+  I  + +M  S  + D+  FS + K+ S  R +  G ++H  I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233

Query: 183 PDSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNRM 242
             + V   L+  Y K  +++ +  VF+ + +++V+SW S+I GYV N  AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293

Query: 243 REALVESNQFTLGSIITACARLRALHQGKWVHGYAIKNVVELSSFLATAFLDMYVKCGQT 302
             + +E +  T+ S+   CA  R +  G+ VH   +K             LDMY KCG  
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353

Query: 303 RDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEALRLFADEIRSDLLPNSVTAASVLSSC 362
             A+ +F E+    +VS+T+MI GY + G   EA++LF +     + P+  T  +VL+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413

Query: 363 SVSGNLSLGMSVHGLGIK---LGLEECAVKNALIDMYAKCHMIDDAYVIFHGILEKDVIT 422
           +    L  G  VH   IK   LG  +  V NAL+DMYAKC  + +A ++F  +  KD+I+
Sbjct: 414 ARYRLLDEGKRVHE-WIKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 473

Query: 423 WNSMISGYAQNGSAYEALRLFN-QMRSNSSAPDAITLVSTLSASATLGAVQVGSSLHAYS 482
           WN++I GY++N  A EAL LFN  +     +PD  T+   L A A+L A   G  +H Y 
Sbjct: 474 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 533

Query: 483 IKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGDKNIITWSAMIGGYGVQGDGSGS 542
           ++ G FS   ++  +L++ YAKCG    A M+FD +  K++++W+ MI GYG+ G G  +
Sbjct: 534 MRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 593

Query: 543 LAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRYFKSMSQEYNFAPSMKHYACMVD 602
           +A+F+ M +   + +E+ F ++L ACS+SG+V+EGWR+F  M  E    P+++HYAC+VD
Sbjct: 594 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 653

Query: 603 LLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREILRLHPNEACY 662
           +LAR+G L +A+ FI+ MP+ PD +++GA L GC ++    L E V  ++  L P    Y
Sbjct: 654 MLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 713

Query: 663 YVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLVETNAGV 702
           YVL++N+YA   +W QV  +R+ + QRGL K PG S +E    V
Sbjct: 714 YVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748

[Close]

BLAST of Lcy13g013090 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 404.4 bits (1038), Expect = 1.8e-112
Identity = 217/606 (35.81%), Postives = 342/606 (56.44%), Query Frame = 0


Query: 99  DVASARMVFDQMPDPDFYAWKVMIRWYFLNDMFADIIPFYNRMR-MSFKDCDNIIFSIIL 158
           ++  A  VF +M + + ++W V++  Y     F + +  Y+RM  +     D   F  +L
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 203

Query: 159 KACSEFREIDEGRKVHCQIVKVGGP-DSFVLTGLIDMYAKCGQIECSSSVFEGIIDKNVV 218
           + C    ++  G++VH  +V+ G   D  V+  LI MY KCG ++ +  +F+ +  ++++
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 263

Query: 219 SWTSMIAGYVQNDCAEEGLVLFNRMREALVESNQFTLGSIITACARLRALHQGKWVHGYA 278
           SW +MI+GY +N    EGL LF  MR   V+ +  TL S+I+AC  L     G+ +H Y 
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323

Query: 279 IKNVVELSSFLATAFLDMYVKCGQTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPSEAL 338
           I     +   +  +   MY+  G  R+A  +F  +   D+VSWT MI GY     P +A+
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383

Query: 339 RLFADEIRSDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLGIKLGL-EECAVKNALIDMY 398
             +    +  + P+ +T A+VLS+C+  G+L  G+ +H L IK  L     V N LI+MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443

Query: 399 AKCHMIDDAYVIFHGILEKDVITWNSMISGYAQNGSAYEALRLFNQMRSNSSAPDAITLV 458
           +KC  ID A  IFH I  K+VI+W S+I+G   N   +EAL    QM+  +  P+AITL 
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLT 503

Query: 459 STLSASATLGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKCARMVFDSMGD 518
           + L+A A +GA+  G  +HA+ ++ G+   + ++  ALL+ Y +CG    A   F+S   
Sbjct: 504 AALAACARIGALMCGKEIHAHVLRTGVGLDD-FLPNALLDMYVRCGRMNTAWSQFNSQ-K 563

Query: 519 KNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDFKPNEVIFTTVLSACSYSGMVEEGWRY 578
           K++ +W+ ++ GY  +G GS  + +F  M+K   +P+E+ F ++L  CS S MV +G  Y
Sbjct: 564 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 623

Query: 579 FKSMSQEYNFAPSMKHYACMVDLLARSGRLDEAFDFIKKMPVQPDISLYGAFLHGCGLYS 638
           F  M ++Y   P++KHYAC+VDLL R+G L EA  FI+KMPV PD +++GA L+ C ++ 
Sbjct: 624 FSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 683

Query: 639 RFDLGEVVVREILRLHPNEACYYVLLSNLYASDGRWGQVNEVRELMLQRGLNKVPGFSLV 698
           + DLGE+  + I  L      YY+LL NLYA  G+W +V +VR +M + GL    G S V
Sbjct: 684 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 743

Query: 699 ETNAGV 702
           E    V
Sbjct: 744 EVKGKV 745

The following BLAST results are available for this feature:

BLAST of Lcy13g013090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ74	2.6e-220	54.63	Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	5.9e-124	36.39	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9C507	4.1e-117	33.44	Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS...	[more]
Q9SN39	1.4e-114	35.09	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9M9E2	2.6e-111	35.81	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop...	[more]

BLAST of Lcy13g013090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBI2	0.0e+00	90.63	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A6J1GZK8	0.0e+00	90.35	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A1S4E1F1	0.0e+00	89.20	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ...	[more]
A0A5D3DQT2	0.0e+00	89.13	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DCB9	0.0e+00	89.49	pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 ...	[more]

BLAST of Lcy13g013090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997487.1	0.0e+00	90.63	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
KAG7032406.1	0.0e+00	90.21	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022957571.1	0.0e+00	90.35	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
XP_038893238.1	0.0e+00	90.06	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa ...	[more]
XP_023540052.1	0.0e+00	90.21	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]

BLAST of Lcy13g013090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03380.1	1.8e-221	54.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	4.2e-125	36.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G69350.1	2.9e-118	33.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	1.0e-115	35.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G15510.1	1.8e-112	35.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 317..339 e-value: 1.0E-4 score: 22.3 coord: 554..581 e-value: 0.0066 score: 16.6 coord: 519..548 e-value: 4.7E-4 score: 20.2 coord: 592..615 e-value: 0.0085 score: 16.3 coord: 491..518 e-value: 0.23 score: 11.8 coord: 289..311 e-value: 0.54 score: 10.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 213..262 e-value: 2.2E-8 score: 34.2 coord: 414..455 e-value: 4.1E-10 score: 39.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 317..346 e-value: 3.8E-4 score: 18.4 coord: 592..615 e-value: 0.0024 score: 15.9 coord: 417..451 e-value: 9.0E-9 score: 33.0 coord: 554..588 e-value: 4.5E-5 score: 21.3 coord: 519..553 e-value: 8.6E-6 score: 23.6 coord: 216..243 e-value: 9.2E-5 score: 20.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 552..582 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 315..349 score: 10.753093
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 415..449 score: 12.846701
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 9.415814
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 517..551 score: 10.347525
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 269..371 e-value: 2.7E-17 score: 64.7 coord: 384..473 e-value: 1.3E-19 score: 72.2 coord: 568..691 e-value: 1.2E-17 score: 65.8 coord: 474..567 e-value: 6.8E-20 score: 73.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..268 e-value: 8.1E-23 score: 83.3
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 62..699
None	No IPR available	PANTHER	PTHR24015:SF1951	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 62..699

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g013090.1	Lcy13g013090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding