Lcy13g012870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g012870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Uracil-DNA glycosylase
Location	Chr13: 19328335 .. 19333675 (-)
RNA-Seq Expression	Lcy13g012870
Synteny	Lcy13g012870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAGTGCAGCATACGATCAAATTTCAAACGAGCGTGGAGAGAGGAAAGGTTTTAGCGGGATTCTCCATTGGTTCCCGCCATTAAAGCACACTCCACTGTCCATTCCACTCTACTCCACCAACCAGACCGATAATGGCTTCCTCCTCCACTTCACTTTCATCCAAATCCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTGAAAACCTCACACACATTGAAAACCCTCGCTACCACGGACGAAAAATGCGATTCAGAGCACACGTTGGCTTCCTCTTCGTCGGACGTGTCTGCCGCTCAGAAATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTCAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGATGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAATCTCTGCAAATTTGTGGAGACGGAGATTTGCTGCAGTGGTGTCCCTATTTATCCTCCTCCCTCTTTAATCTTTAATGCTCTGAATTCTACCCCTTTCGAGAGGGTGAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCGCCTAGTCTTCTCAACATATTCAAGGAACTGAGGGAGGATCTTGGTTGTTCCATCCCATCCCATGGGAATCTCGAGAAATGGGCTGTTCAGGTGCTACTGTAAAAACGTTTATAGTCGCTATTCATTATAAACTACTCATTCCATTCTTCAAAGGAAATGAATGGAGGACCTGAAATAATAGATTTTTCTTTATCAGGGTTTGATAGGAAATGTAGAGCTACTTCTAGTATATTGGTCTTGTGAATATTTTGATGCTACGGAAATGCTACCTACCATTGCCTTCTTTCGTTTGCCCTTAAGCATTTGGTCCTTATTTCGTTTACTTTGAATAGTCTCAGAATTTGCATTGAAGAGGTTTTTCATCATGGATTTTAATTAAGGAAAATAGGTCACAGTTCTCATTATACTTGATCTTTATATGCAGATTCCAGTTGTTTGATTTGGTTAAAATATGATGCATATAAGTCTAGTTTATTTATCATTAGATGAAATATATGTAAATATAGGCTTGGGAGAGATGGATTATATAATCGATACCGTTCATCACAAGGTCGAGAATTTTGGTGATTGCTAAGGGAATGGGTAAATATTTTCAGAAAACCAATGCCTTTTTTTAATTGAAGATATTATTTTTGGAGAATACTAATAAGCTGTGCTGGTTTCAAGATTTTTTTAACATGTTAATTCTAGAAGAGGTTGAACGGTTGTTAGAATGTGACTTCTCTAAGTTGAAAGATCGGTTCATCCAATTGCCCGTTCATACTGATAAAAGTATTTTAAATAAGGTTTATCATGACATTACTTTTATGAATTTGAGTTTGTTGGGTTTCATAGGGGACAAGTTGCTCAATTTGGGAGATCTTTTTCTGCATGGAAAAATTCATAATTAGCTATTTGTTCTGAGAAAGTTATTTTGTTACAATGTGGTTGAAGTTCAATTTGGTGTCTTTTTCACTATTCTGTTCTCTGAAATACCTTTTATACACATTGTAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGGTACTAATCTTCTTTTCACCTCAAGTTCCATACCTTCTTTTATCAATCTACTACTATTTGTTTAAATCAGTAAAGTCATGGTGAAGGCAATTGCATTAGTAAACAAATATTTCATTGATGAGTTTTGCTCTGGACCGTCTAAAAAACTTTGCAATAGCTAAACAACAATTTAAATTTCCAGCTCCAGAGAATAACATCGAACTTTAGTGCCATCAGCAACATCTACAACCGAACCAAATACTCATCAAACATCAGAAAACCATCACAAAGAGCAACACTGTTAATAGATTGCCATATCTTCAAAACCTGCAGCTAACTCTTCAAGCCGAGATCTGCAACGACTAAAGCAAAACTATAATCTTTCTGCACTTACTCATCAACCAGAAAACTCATAAACTGAAAATCTTTTCCTTGGAAAAAAATGGCAAAAAGCCACCTAATGGGTGATCTTCAACAAAGAACTTCATAAAGAAATAAAATAACACTGGTGCAATGTAAGCCCTTGGAGAACAAAGCTAACAAAAACTCCAGCCCCCCAAAATAGCCATCATAAAAAACCAACATCAGACCCAAAGACAAGGCCAAAACGCCCTTCCAAGACTGCCAAAACCAGACCAGAAAGAACTGAAAACGAATTGAAACCAAGATTTTGGATAGACATTCCAAAGAACCAACTGCTTGAGCAACACTTGAAAGACTGAAAAATTTCTTCTTCTTTCCCATACGTATCAAAACTTAATGAGTTCTGTTCTACATTCTTCTATTTCTAGGTATAGATACATGCTTTCCCGCTTTTAGTTATTGATAAATATTTTGGTTTTACCTGTTTAGTTAGAAAGCATCAAGCCAACTCTCATGCTAAGAAAGGATGGGAACAATTCACTGATGCTGTCATCAAGACAATATCTCAAAAGAAGGAAGGGGTTATTTTTCTCCTTTGGGGGAACTCTGCTCAGGCGAAATTGAGGTACTTCTATATTAAGATATTAGTGTTTACAGGGAGTGCATGACTCTGGAAGAAACCAATACAATAATAGAATCACAGTAATATATAATCAGCGACCTTTATATTTTCTTGTTCAAAAAAGGAAAATCCTACCTTTAGATTTACAATTTTGCATCTACTATGTATTTTTCGTACATTATTTAGAATCGGGTATACAAATCTTAACTGTGAAAAGTAAATAAAGGTTGAGGGTTTTTAGTTGAAGACTCGAAGTATTTGATAGATAAACACAGTGTGGGGTCAGAGGAGTAAGAATACTTTGTGAATCCTGCATGCTATGAGGTGTGTTGGTTTTTATCTGCTTTGTGGTTCCGTGGGTTCACTAGCCATAGTTTTCTCTTGCACATCTTTGTCTTAGATATCCTGCAACATATTGATTCTCGATTTCCTTCCTAAACTCTTAAGACCTTCATGCATTCCATTAGCCACTGTTTTCTTCTTCTTTTTCTTCTTTTTTGTGTGTGAGAGAATTTTTCTCTCTGTTTTTTTTCCCTCTCCAACCTAGTCAGGAATCTGTGTGTTTTTCCTCCGTTCATTTTTCTTCTATCTCATTGCTGCAAATTCGCTCATCATTTCTTCCAAAATGTGTTGCATTGTCGACAATCTCTCCTAGACTCTGAATTCATTCTTAAAGTTTGAATTGATTTAACAACAATTTGATAGGATTGTTGTAGTAGTAACTGATAAAAACTATCAATATAAGAAAGGAAAATTATATCATCCAAGCTAAGCCTGTTTACTTCATAAAGCCGTTCGTTCTATTTATAATGAGACAACTTTAGCGAACTTATTTTATATATATATATATATTTTGAACACATCTCAAGTGCATTTCATATTAAAGGTTCACATATCTTATCAAAAAAGTATTAATGGTTCACATATTCAGCCTCATGCCAATATCCAGGCCCACACCCACACCTTGGGGGAAGTGTTTGTGAGAGTATTCGCTAGGATATTAGTAGGATATTATTAAGGACATAATGGTAATTAGTTATGAGTGGCTTGGTTATAAATAAGAGAATTAGGAGTCTTAGAAAGGGGAATAATTTTTGGTATTGTCGAGTGTGGGAGTGGGACTTTATATTGCAATATAGTTCTATCTTTGTGGTGTCTTAATGTTTTCTGGTCAGGGGAATTCTAACAGTGTTGTAAATACTTTACTAAGTTTACTTTAGTAGTGATTCGATAGCCATCTTGTTATGCAGGCTCTAAACTTAGAAGTATAGGAACTTGTCCTGTGAAGTATAGAAAACTATTTGGAGAAGCTAGGTTTTGCTGAGTTTTAAAATCAACTGTAGTTCAGTTTTCATATACCTTTACCTAGCTTAGGTTCTACTATTTTGATAATTAGCTTAGAAGAGAATCAATCATTAAAGGGATTTAATTCCTCCTTTGGGGGGCAGTAGCATGCAACTTCACTTAGAATCTGATGTATGGCGCAGGTTGATAGATGAGAAAAGGCATCACATACTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGCTGCAGGTTAGTTTTATCGTTTAATTCCATTAGATTTTTCAATATAAGGAAGAGAAATTTGGGATTTTCTCTAACCTTTGTACTTTATCACTTTCCTTCAATATAGTTCTCACAATAACATTTTATTGCCAGTATGCGACTTGGTATTTTGTGCATTTGTAGGCACATATCAATTTGTTCTCTACCTTCTTCCTCTAAAATCAGACTTCTGAAGTTGGAGCACTTCTTTGCATGATTTTATGTGATTATAGTCTGACAATGAGTTTGGTATATTTTTGGGATAGTGAAAATTGTTTTTACCCAATAAAGAAACACGCGTCTTTCCAAATTTTTGTAGTTTTGATTACATAGTAAAAAATGATTGTATAAATTCTCAAAATATTTGAAAGCACTTTGGAACATAGATGTTTATGGATAAAATGTCACTTAAAAGTAGAAAATCATCCCAAACTCTCTTACCTATTTCCTTAAGTTTTTTGGTCTGTTTCTCGAACATAGACTATTTTGCAAGGTTGGTTACAATTGTCAGTGATAAAATGGTTTTGTAATTCACTAATATGAAGCTAAGTAGATGGGTGCTTTTTCTTCTTTCCTTGGACGTGCAAAAGCATAGAATGTTTTCGCTTATCAAATTTGTTTTCTGCCAACTGTGACTTTTTCTACAGACATTTTTCTCAAACAAACATGCTTCTCAAGGAACTCGGTACCGCCTCAATAGACTGGCAACTTTGATCCGAAGGACCTGCTCGAACAATTGCAGTTCATTTTGTGGATAGACTCCCAAATCCTGAGTCATGCTAGGATCTGCTGGATCGACGATTTTCGTTCAACTTTCACTTGTCAATTTATGGTTGTTAACATGTAGAGATGCTGCCATCCTTTACCATTTTTTGTATCATAGTGTTTGTGCCTGCAGTTCGATATTGATCCCAAAGCTGCAGATCCCTTCTTTTTTTGATGCAACAGGGTAAGTTAGAAGGAAGTTTGGTCTACAATATGGTGACCAGTGCTTAGCATGAATCAGGCTAAATGTATGTTGGCTTGGTACTTCATATTTGGGGTGTTCTTTTAACCCTATTATTCAAAAAATTTCAAATGTTGTAACA

mRNA sequence

CGGAGTGCAGCATACGATCAAATTTCAAACGAGCGTGGAGAGAGGAAAGGTTTTAGCGGGATTCTCCATTGGTTCCCGCCATTAAAGCACACTCCACTGTCCATTCCACTCTACTCCACCAACCAGACCGATAATGGCTTCCTCCTCCACTTCACTTTCATCCAAATCCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTGAAAACCTCACACACATTGAAAACCCTCGCTACCACGGACGAAAAATGCGATTCAGAGCACACGTTGGCTTCCTCTTCGTCGGACGTGTCTGCCGCTCAGAAATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTCAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGATGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAATCTCTGCAAATTTGTGGAGACGGAGATTTGCTGCAGTGGTGTCCCTATTTATCCTCCTCCCTCTTTAATCTTTAATGCTCTGAATTCTACCCCTTTCGAGAGGGTGAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCGCCTAGTCTTCTCAACATATTCAAGGAACTGAGGGAGGATCTTGGTTGTTCCATCCCATCCCATGGGAATCTCGAGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGTTAGAAAGCATCAAGCCAACTCTCATGCTAAGAAAGGATGGGAACAATTCACTGATGCTGTCATCAAGACAATATCTCAAAAGAAGGAAGGGGTTATTTTTCTCCTTTGGGGGAACTCTGCTCAGGCGAAATTGAGGTTGATAGATGAGAAAAGGCATCACATACTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGCTGCAGACATTTTTCTCAAACAAACATGCTTCTCAAGGAACTCGGTACCGCCTCAATAGACTGGCAACTTTGATCCGAAGGACCTGCTCGAACAATTGCAGTTCATTTTGTGGATAGACTCCCAAATCCTGAGTCATGCTAGGATCTGCTGGATCGACGATTTTCGTTCAACTTTCACTTGTCAATTTATGGTTGTTAACATGTAGAGATGCTGCCATCCTTTACCATTTTTTGTATCATAGTGTTTGTGCCTGCAGTTCGATATTGATCCCAAAGCTGCAGATCCCTTCTTTTTTTGATGCAACAGGGTAAGTTAGAAGGAAGTTTGGTCTACAATATGGTGACCAGTGCTTAGCATGAATCAGGCTAAATGTATGTTGGCTTGGTACTTCATATTTGGGGTGTTCTTTTAACCCTATTATTCAAAAAATTTCAAATGTTGTAACA

Coding sequence (CDS)

ATGGCTTCCTCCTCCACTTCACTTTCATCCAAATCCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTGAAAACCTCACACACATTGAAAACCCTCGCTACCACGGACGAAAAATGCGATTCAGAGCACACGTTGGCTTCCTCTTCGTCGGACGTGTCTGCCGCTCAGAAATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTCAAGTTGGAGGAGCTTTTGGTGGATGAGACATGGTTCGATGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAATCTCTGCAAATTTGTGGAGACGGAGATTTGCTGCAGTGGTGTCCCTATTTATCCTCCTCCCTCTTTAATCTTTAATGCTCTGAATTCTACCCCTTTCGAGAGGGTGAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCGCCTAGTCTTCTCAACATATTCAAGGAACTGAGGGAGGATCTTGGTTGTTCCATCCCATCCCATGGGAATCTCGAGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGTTAGAAAGCATCAAGCCAACTCTCATGCTAAGAAAGGATGGGAACAATTCACTGATGCTGTCATCAAGACAATATCTCAAAAGAAGGAAGGGGTTATTTTTCTCCTTTGGGGGAACTCTGCTCAGGCGAAATTGAGGTTGATAGATGAGAAAAGGCATCACATACTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGCTGCAGACATTTTTCTCAAACAAACATGCTTCTCAAGGAACTCGGTACCGCCTCAATAGACTGGCAACTTTGA

Protein sequence

MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQKSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLCKFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL

Homology

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BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot
Match: Q9LIH6 (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-108
Identity = 206/330 (62.42%), Postives = 243/330 (73.64%), Query Frame = 0


Query: 9   SSKSRTLIDIFQPALSKRLKT---------------SHTLKTLATTDEKCDSEHTLASSS 68
           SS  +TL+D FQPA  KRLK                S  L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  SDVSAAQKSRMETNKWMARSKRNLKICSDRV--SKWENGC-VKLEELLVDETWFDALPGE 128
           S ++  Q +R E NK++A+SKRNL +CS+RV  +K E  C V L ELLV+E+W  ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVETEICCSGVP--IYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQ 188
           F KPYA +L  F+E EI        IYPP  LIFNALN+TPF+RVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQ 248
           AMGLSFSVPEG K+P SLLNIFKEL +D+GCSIP HGNL+KWAVQGVLLLNAVLTVR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLS 308
            NSHAKKGWEQFTDAVI++ISQ+KEGV+FLLWG  AQ K +LID  +HHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           ANRGFF CRHFS+ N LL+E+G   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

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BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot
Match: Q1I5T6 (Uracil-DNA glycosylase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=ung PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-72
Identity = 130/224 (58.04%), Postives = 162/224 (72.32%), Query Frame = 0


Query: 95  EELLVDETWFDALPGEFEKPYALNLCKFVETEICCSGVPIYPPPSLIFNALNSTPFERVK 154
           + + ++ +W  AL  EF++PY   L +F+  E   +G  IYPP  LIFNALNSTP E+VK
Sbjct: 5   DRIKLEPSWKAALRAEFDQPYMHQLREFLRQEY-AAGKEIYPPGPLIFNALNSTPLEQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  PPSL+NI+KEL+ DL   IP+HG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELQRDLNLPIPNHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV++  A SHAKKGWE FTD +I+ +S++   V+FLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVQRANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 RHHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           RH +LK+ HPS LSA RGFFGC HFS+ N  L++ G A IDW L
Sbjct: 185 RHLVLKSVHPSPLSAYRGFFGCGHFSRANGFLQQHGMAPIDWSL 227

[Close]

BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot
Match: C1DQR0 (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.1e-72
Identity = 128/224 (57.14%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 95  EELLVDETWFDALPGEFEKPYALNLCKFVETEICCSGVPIYPPPSLIFNALNSTPFERVK 154
           + + ++ +W +AL  EFEKPY   L  F+  E   +G  IYPP SLIFNAL+STP ++VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRRE-KAAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVI+GQDPYHGPGQA GL FSV  GV +PPSL NIFKEL+ DL   IP HG+L++WA QG
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEK 274
           VLLLN  LTV +  A SHA  GW++FTD VI+ +SQ++E V+F+LWG+ AQ+K RLID  
Sbjct: 126 VLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSS 185

Query: 275 RHHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           +H +L +AHPS LSA+RGF G  HFS+ N  L++ G   IDW L
Sbjct: 186 KHLVLCSAHPSPLSAHRGFIGNGHFSRANQFLEQHGLTPIDWHL 228

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BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot
Match: A5W8H2 (Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=ung PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 8.9e-72
Identity = 129/224 (57.59%), Postives = 160/224 (71.43%), Query Frame = 0


Query: 95  EELLVDETWFDALPGEFEKPYALNLCKFVETEICCSGVPIYPPPSLIFNALNSTPFERVK 154
           + + ++ +W  AL GEF++PY   L +F+  E   +G  IYPP  LIFNALNSTP  +VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLGQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  PPSL+NI+KEL+ DL   IPSHG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV +  A SHAKKGWE FTD +I+ +S++   V+FLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 RHHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           +H +LK+ HPS LSA RGF GC HFS+TN  L++ G   IDW L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFIGCGHFSRTNSFLEQRGLGPIDWAL 227

[Close]

BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot
Match: Q88N05 (Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=ung PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-71
Identity = 128/224 (57.14%), Postives = 160/224 (71.43%), Query Frame = 0


Query: 95  EELLVDETWFDALPGEFEKPYALNLCKFVETEICCSGVPIYPPPSLIFNALNSTPFERVK 154
           + + ++ +W  AL GEF++PY   L +F+  E   +G  IYPP  LIFNALNSTP ++VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLDQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  PPSL+NI+KEL+ DL   IPSHG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV +  A SHAKKGWE FTD +I+ +S++   V+FLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 RHHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           +H +LK+ HPS LSA RGF GC HFS+ N  L++ G   IDW L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFIGCGHFSRANSFLEQRGLGPIDWAL 227

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BLAST of Lcy13g012870 vs. ExPASy TrEMBL
Match: A0A6J1J2E4 (Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 7.6e-167
Identity = 292/318 (91.82%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SL SK+RTLIDIFQPALSKRLKTS TLKTLATTDEKCDSE TLASSS D+S++Q
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
           KSRMETNKW+ARS RNLKI SDRVSKWENGCVKLEELLVDETWF+ALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEIC SGVPIYPPP LIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELREDLGCSIPSHGNL+KWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEGV+FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELG  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. ExPASy TrEMBL
Match: A0A1S3CPW3 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.7e-166
Identity = 289/318 (90.88%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLAT D+KCDS+ TLASSS+D+SA+Q
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
            SRMETNKWMARSKRNLKICSDRVSKWENGC+KLEELLV+ETWF+ALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEG++FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELGTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. ExPASy TrEMBL
Match: A0A0A0KMG3 (Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 289/318 (90.88%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLAT D+KCDS+ TLASSS+D+SA+Q
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLK CSDRVSKWENGCVKLEELLV+ETWF+ALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEG+IFLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKE+GTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. ExPASy TrEMBL
Match: A0A6J1EEH8 (Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 291/318 (91.51%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SL SK+RTLIDIFQPALSKR+KTS TLKTLATTDEK DSE TLASSS D+S++Q
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
           KSRMETNKW+ARSKRNLKI SDRVSKWENGCVKLEELLVDETWF+ALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TD VIKTISQ KEGV+FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDVVIKTISQNKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELG  +IDWQL
Sbjct: 301 RTNVLLKELGIDAIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. ExPASy TrEMBL
Match: A0A1S3CND7 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 2.5e-162
Identity = 289/343 (84.26%), Postives = 310/343 (90.38%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLAT D+KCDS+ TLASSS+D+SA+Q
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
            SRMETNKWMARSKRNLKICSDRVSKWENGC+KLEELLV+ETWF+ALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLT----------------- 240
           KIP SLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKR 300
                   VR+HQANSHAK+GWEQFTDAVIKTISQKKEG++FLLWGNSAQAKLRLIDEK+
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           HHILKAAHPSGLSANRGFFGCRHFS+TN+LLKELGTASIDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of Lcy13g012870 vs. NCBI nr
Match: XP_023525611.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 599.0 bits (1543), Expect = 2.4e-167
Identity = 293/318 (92.14%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MAS S SL SK+RTLIDIFQPALSKRLKTS TLKTLATTD+KCDSE TLASSS D+S++Q
Sbjct: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
           KSRMETNKW+ARSKRNLKI SDRVSKWENGCVKLEELLVDETWF+ALPGEFEKPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEIC SGVP+YPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEGV+FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TNMLLKELG  +IDWQL
Sbjct: 301 RTNMLLKELGIGAIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. NCBI nr
Match: XP_022981553.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 596.3 bits (1536), Expect = 1.6e-166
Identity = 292/318 (91.82%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SL SK+RTLIDIFQPALSKRLKTS TLKTLATTDEKCDSE TLASSS D+S++Q
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
           KSRMETNKW+ARS RNLKI SDRVSKWENGCVKLEELLVDETWF+ALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVETEIC SGVPIYPPP LIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELREDLGCSIPSHGNL+KWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEGV+FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELG  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. NCBI nr
Match: XP_038891400.1 (uracil-DNA glycosylase, mitochondrial [Benincasa hispida])

HSP 1 Score: 595.9 bits (1535), Expect = 2.1e-166
Identity = 291/318 (91.51%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLATTDEKCDSE TLAS S D+SAAQ
Sbjct: 46  MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASFSIDMSAAQ 105

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
           KSRMETNKWMARSKRNLKI SDRVSKWENGC+KLE+LLV+ETWF+ALPGEFEKPYA+NLC
Sbjct: 106 KSRMETNKWMARSKRNLKIVSDRVSKWENGCMKLEDLLVEETWFEALPGEFEKPYAVNLC 165

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 166 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 225

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKEL++DLGCSIPSHGNLEKWAVQGVLLLN VL+VRKHQANSHAKKGWEQF
Sbjct: 226 KIPSSLLNIFKELKDDLGCSIPSHGNLEKWAVQGVLLLNTVLSVRKHQANSHAKKGWEQF 285

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEG++FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSA+RGFFGCRHFS
Sbjct: 286 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSASRGFFGCRHFS 345

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELGTASIDWQL
Sbjct: 346 RTNVLLKELGTASIDWQL 363

[Close]

BLAST of Lcy13g012870 vs. NCBI nr
Match: XP_008465227.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 595.1 bits (1533), Expect = 3.5e-166
Identity = 289/318 (90.88%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLAT D+KCDS+ TLASSS+D+SA+Q
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
            SRMETNKWMARSKRNLKICSDRVSKWENGC+KLEELLV+ETWF+ALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEG++FLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKELGTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. NCBI nr
Match: XP_004140430.1 (uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical protein Csa_004717 [Cucumis sativus])

HSP 1 Score: 594.7 bits (1532), Expect = 4.6e-166
Identity = 289/318 (90.88%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MASSSTSLSSKSRTLIDIFQPALSKRLKTSHTLKTLATTDEKCDSEHTLASSSSDVSAAQ 60
           MASSS SLSSK+RTLIDIFQPALSKRLKTS TLKTLAT D+KCDS+ TLASSS+D+SA+Q
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  KSRMETNKWMARSKRNLKICSDRVSKWENGCVKLEELLVDETWFDALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLK CSDRVSKWENGCVKLEELLV+ETWF+ALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICCSGVPIYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEIC SGVPIYPPPSLIFNALNSTPF+RVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIP SLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEG+IFLLWGNSAQAKLRLIDEK+HHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 QTNMLLKELGTASIDWQL 319
           +TN+LLKE+GTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Lcy13g012870 vs. TAIR 10
Match: AT3G18630.1 (uracil dna glycosylase )

HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-109
Identity = 206/330 (62.42%), Postives = 243/330 (73.64%), Query Frame = 0


Query: 9   SSKSRTLIDIFQPALSKRLKT---------------SHTLKTLATTDEKCDSEHTLASSS 68
           SS  +TL+D FQPA  KRLK                S  L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  SDVSAAQKSRMETNKWMARSKRNLKICSDRV--SKWENGC-VKLEELLVDETWFDALPGE 128
           S ++  Q +R E NK++A+SKRNL +CS+RV  +K E  C V L ELLV+E+W  ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVETEICCSGVP--IYPPPSLIFNALNSTPFERVKVVILGQDPYHGPGQ 188
           F KPYA +L  F+E EI        IYPP  LIFNALN+TPF+RVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPPSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQ 248
           AMGLSFSVPEG K+P SLLNIFKEL +D+GCSIP HGNL+KWAVQGVLLLNAVLTVR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKKGWEQFTDAVIKTISQKKEGVIFLLWGNSAQAKLRLIDEKRHHILKAAHPSGLS 308
            NSHAKKGWEQFTDAVI++ISQ+KEGV+FLLWG  AQ K +LID  +HHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSQTNMLLKELGTASIDWQL 319
           ANRGFF CRHFS+ N LL+E+G   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

The following BLAST results are available for this feature:

BLAST of Lcy13g012870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH6	2.0e-108	62.42	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=...	[more]
Q1I5T6	2.3e-72	58.04	Uracil-DNA glycosylase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=ung ...	[more]
C1DQR0	3.1e-72	57.14	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=...	[more]
A5W8H2	8.9e-72	57.59	Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BC...	[more]
Q88N05	1.2e-71	57.14	Uracil-DNA glycosylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCI...	[more]

BLAST of Lcy13g012870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2E4	7.6e-167	91.82	Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1	[more]
A0A1S3CPW3	1.7e-166	90.88	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
A0A0A0KMG3	2.2e-166	90.88	Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1	[more]
A0A6J1EEH8	1.1e-165	91.51	Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1	[more]
A0A1S3CND7	2.5e-162	84.26	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]

BLAST of Lcy13g012870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525611.1	2.4e-167	92.14	uracil-DNA glycosylase, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022981553.1	1.6e-166	91.82	uracil-DNA glycosylase, mitochondrial [Cucurbita maxima]	[more]
XP_038891400.1	2.1e-166	91.51	uracil-DNA glycosylase, mitochondrial [Benincasa hispida]	[more]
XP_008465227.1	3.5e-166	90.88	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_004140430.1	4.6e-166	90.88	uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical...	[more]

BLAST of Lcy13g012870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18630.1	1.4e-109	62.42	uracil dna glycosylase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 146..306 e-value: 2.7E-40 score: 149.8
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 150..307 e-value: 2.1E-24 score: 86.3
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 146..306 e-value: 2.7E-40 score: 149.8
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 80..318 e-value: 2.2E-98 score: 330.6
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 98..318
IPR002043	Uracil-DNA glycosylase family 1	TIGRFAM	TIGR00628	TIGR00628	coord: 101..308 e-value: 1.4E-80 score: 268.1
IPR002043	Uracil-DNA glycosylase family 1	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 28..318
IPR002043	Uracil-DNA glycosylase family 1	HAMAP	MF_00148	UDG	coord: 100..317 score: 38.823021
IPR002043	Uracil-DNA glycosylase family 1	CDD	cd10027	UDG-F1-like	coord: 115..316 e-value: 1.16188E-130 score: 368.315
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g012870.1	Lcy13g012870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0097510	base-excision repair, AP site formation via deaminated base removal
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds