Lcy13g012160 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGATATTTAGAACCATATAAAGGAGAGAGATATCACCCTCCTGATTTTCGTCGGGGTAGCCAACCAGTAGGTTATCAAGAGATATTCAACCAAGCACATTCTTCTCTTAGAAGTGTCATTGAGCGAACTTTTGGAATATGGAAGAAGAGGTGGAAGATTCTAAGAGATATATCTAATTATCCTTTTCAAAAGCAAGTGAAGATAATTATTGCAACTATGACACTTCACAACTATATAAGAAGATATGATCGAAGTGATGGTCATTTTGAGAAAGATTGA ATGAAAGGATATTTAGAACCATATAAAGGAGAGAGATATCACCCTCCTGATTTTCGTCGGGGTAGCCAACCAGTAGGTTATCAAGAGATATTCAACCAAGCACATTCTTCTCTTAGAAGTGTCATTGAGCGAACTTTTGGAATATGGAAGAAGAGGTGGAAGATTCTAAGAGATATATCTAATTATCCTTTTCAAAAGCAAGTGAAGATAATTATTGCAACTATGACACTTCACAACTATATAAGAAGATATGATCGAAGTGATGGTCATTTTGAGAAAGATTGA ATGAAAGGATATTTAGAACCATATAAAGGAGAGAGATATCACCCTCCTGATTTTCGTCGGGGTAGCCAACCAGTAGGTTATCAAGAGATATTCAACCAAGCACATTCTTCTCTTAGAAGTGTCATTGAGCGAACTTTTGGAATATGGAAGAAGAGGTGGAAGATTCTAAGAGATATATCTAATTATCCTTTTCAAAAGCAAGTGAAGATAATTATTGCAACTATGACACTTCACAACTATATAAGAAGATATGATCGAAGTGATGGTCATTTTGAGAAAGATTGA MKGYLEPYKGERYHPPDFRRGSQPVGYQEIFNQAHSSLRSVIERTFGIWKKRWKILRDISNYPFQKQVKIIIATMTLHNYIRRYDRSDGHFEKD Homology
BLAST of Lcy13g012160 vs. ExPASy TrEMBL
Match: A0A5C7H626 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021570 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Lcy13g012160 vs. ExPASy TrEMBL
Match: M5WCA3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa017281mg PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Lcy13g012160 vs. ExPASy TrEMBL
Match: A0A5N5FXF0 (DDE Tnp4 domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_005777 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.2e-36 Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Lcy13g012160 vs. ExPASy TrEMBL
Match: A0A5C7ITA1 (DDE Tnp4 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000937 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Lcy13g012160 vs. ExPASy TrEMBL
Match: A0A540MIT7 (DDE Tnp4 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_015721 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35 Identity = 66/92 (71.74%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Lcy13g012160 vs. NCBI nr
Match: XP_020419135.1 (uncharacterized protein LOC109949131 [Prunus persica] >XP_020419136.1 uncharacterized protein LOC109949131 [Prunus persica]) HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37 Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Lcy13g012160 vs. NCBI nr
Match: TXG52401.1 (hypothetical protein EZV62_021570 [Acer yangbiense]) HSP 1 Score: 164.5 bits (415), Expect = 4.5e-37 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0
BLAST of Lcy13g012160 vs. NCBI nr
Match: XP_020419156.1 (putative nuclease HARBI1 [Prunus persica]) HSP 1 Score: 163.7 bits (413), Expect = 7.7e-37 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Lcy13g012160 vs. NCBI nr
Match: XP_028952690.1 (uncharacterized protein LOC103431050 [Malus domestica]) HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36 Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of Lcy13g012160 vs. NCBI nr
Match: XP_034202714.1 (putative nuclease HARBI1 [Prunus dulcis]) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Lcy13g012160 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Lcy13g012160 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Lcy13g012160 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 5.0e-10 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of Lcy13g012160 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08 Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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