Lcy13g010990 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g010990
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr13: 12142239 .. 12143216 (+)
RNA-Seq ExpressionLcy13g010990
SyntenyLcy13g010990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGTGGAAGGGGGTTTGGAAAATGTTTATCCCGAATAAGATCAAGATTTTTCTTTGGAGACTTTCTTTAGACCGCTTGCCCACGATTGATAATTTGGGTATTCGGGGCTGTGACGTTTTGAATGTTTGTGGCCTCTGTAGGCGAGGTGGGGAGTCCAGTCTGCATGTCTTCTGGCATTGCAAGTTCATGAGGGCAGTGTTGATGGAGTCCGAGTTTGGAAGTTTGATACATAAGGTGCAGGCTTGGTCTATGTTTGATCTTCTTAGGGAAGTGAAGGACAAGGTTGGTTGGGGAAGATTTGAGTTGTTTGTGGTGGTGTTGTGGGCTGTGTGGAACTGTCGAAATCAGCGGAAATTTAGGGGCCTAGAACCAGTGGTGGGACTAGTAGAGTGGGCGACGAGTTATATCTCGTCGTTCCAGCAGGCGACCTCAGCTTGTGGAGTTGGGGTGCGGAGTGTTCTTGCAAGGGAAGATGTGAGATGGAGACCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGACGGGTCTGGGAGTGGTGGTTCGGGATTCCTCTGGTCGGGTTATGCTGTCGGCATCTTTGGTGCAGCGACATGTGCGAAGCCCGGAGATGGCTGAAGGTTGGGCCGCAGTTAAGGGAACGAGACTGGCAGTGGAGATGGGTTTGGGCCCATTGGTGTTGGAGACTGACTCCAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCAGGGGATGACTTCTCAGATGTGGGTGCCCTGGTGGCTGAGTTACGAAAAGACATGCCAGGTCCTTCCTTTTTCGGCTGCAGGTTCACTCGAAGAGAGGGAAATGAGGTGGCTCACCAGTTGGCTTTTCTAGCAGGGAGGGACGAAGAATCTAGGGTGTGGGTTGAATCTGTACCCCAGTGTGTTGAGGGGTTGATCCTTTCTGATATGGCACTGTTGTGA

mRNA sequence

ATGGGTTGGTGGAAGGGGGTTTGGAAAATGTTTATCCCGAATAAGATCAAGATTTTTCTTTGGAGACTTTCTTTAGACCGCTTGCCCACGATTGATAATTTGGGTATTCGGGGCTGTGACGTTTTGAATGTTTGTGGCCTCTGTAGGCGAGGTGGGGAGTCCAGTCTGCATGTCTTCTGGCATTGCAAGTTCATGAGGGCAGTGTTGATGGAGTCCGAGTTTGGAAGTTTGATACATAAGGTGCAGGCTTGGTCTATGTTTGATCTTCTTAGGGAAGTGAAGGACAAGGTTGGTTGGGGAAGATTTGAGTTGTTTGTGGTGGTGTTGTGGGCTGTGTGGAACTGTCGAAATCAGCGGAAATTTAGGGGCCTAGAACCAGTGGTGGGACTAGTAGAGTGGGCGACGAGTTATATCTCGTCGTTCCAGCAGGCGACCTCAGCTTGTGGAGTTGGGGTGCGGAGTGTTCTTGCAAGGGAAGATGTGAGATGGAGACCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGACGGGTCTGGGAGTGGTGGTTCGGGATTCCTCTGGTCGGGTTATGCTGTCGGCATCTTTGGTGCAGCGACATGTGCGAAGCCCGGAGATGGCTGAAGGTTGGGCCGCAGTTAAGGGAACGAGACTGGCAGTGGAGATGGGTTTGGGCCCATTGGTGTTGGAGACTGACTCCAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCAGGGGATGACTTCTCAGATGTGGGTGCCCTGGTGGCTGAGTTACGAAAAGACATGCCAGGTCCTTCCTTTTTCGGCTGCAGGTTCACTCGAAGAGAGGGAAATGAGGTGGCTCACCAGTTGGCTTTTCTAGCAGGGAGGGACGAAGAATCTAGGGTGTGGGTTGAATCTGTACCCCAGTGTGTTGAGGGGTTGATCCTTTCTGATATGGCACTGTTGTGA

Coding sequence (CDS)

ATGGGTTGGTGGAAGGGGGTTTGGAAAATGTTTATCCCGAATAAGATCAAGATTTTTCTTTGGAGACTTTCTTTAGACCGCTTGCCCACGATTGATAATTTGGGTATTCGGGGCTGTGACGTTTTGAATGTTTGTGGCCTCTGTAGGCGAGGTGGGGAGTCCAGTCTGCATGTCTTCTGGCATTGCAAGTTCATGAGGGCAGTGTTGATGGAGTCCGAGTTTGGAAGTTTGATACATAAGGTGCAGGCTTGGTCTATGTTTGATCTTCTTAGGGAAGTGAAGGACAAGGTTGGTTGGGGAAGATTTGAGTTGTTTGTGGTGGTGTTGTGGGCTGTGTGGAACTGTCGAAATCAGCGGAAATTTAGGGGCCTAGAACCAGTGGTGGGACTAGTAGAGTGGGCGACGAGTTATATCTCGTCGTTCCAGCAGGCGACCTCAGCTTGTGGAGTTGGGGTGCGGAGTGTTCTTGCAAGGGAAGATGTGAGATGGAGACCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGACGGGTCTGGGAGTGGTGGTTCGGGATTCCTCTGGTCGGGTTATGCTGTCGGCATCTTTGGTGCAGCGACATGTGCGAAGCCCGGAGATGGCTGAAGGTTGGGCCGCAGTTAAGGGAACGAGACTGGCAGTGGAGATGGGTTTGGGCCCATTGGTGTTGGAGACTGACTCCAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCAGGGGATGACTTCTCAGATGTGGGTGCCCTGGTGGCTGAGTTACGAAAAGACATGCCAGGTCCTTCCTTTTTCGGCTGCAGGTTCACTCGAAGAGAGGGAAATGAGGTGGCTCACCAGTTGGCTTTTCTAGCAGGGAGGGACGAAGAATCTAGGGTGTGGGTTGAATCTGTACCCCAGTGTGTTGAGGGGTTGATCCTTTCTGATATGGCACTGTTGTGA

Protein sequence

MGWWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCKFMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFRGLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRDEESRVWVESVPQCVEGLILSDMALL
Homology
BLAST of Lcy13g010990 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.4e-17
Identity = 69/260 (26.54%), Postives = 108/260 (41.54%), Query Frame = 0

Query: 7   VWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK--- 66
           +WK+ +P ++K FLW +    + T +    R     NVC +C+ G ES LHV   C    
Sbjct: 291 LWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQL 350

Query: 67  --FMRAVLMESEFGSLIHKVQAWSMFDLL--REVKDKVGWGRFELFVVVLWAVWNCRNQR 126
             ++R V    + G     +  W ++D L  R   + + W    +F V++W  W  R   
Sbjct: 351 GIWVRVVPQRRQQGFFSKSLFEW-LYDNLGDRSGCEDIPWS--TIFAVIIWWGWKWRCGN 410

Query: 127 KF----RGLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNV 186
            F    +  + V  + EWA   +  ++  +    VG+        + W  P  GW KVN 
Sbjct: 411 IFGENTKCRDRVKFVKEWA---VEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNT 470

Query: 187 DASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGP 246
           D + R        G V+RD +G      SL      +P+ AE W    G   A E  +  
Sbjct: 471 DGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQ-AELWGVYYGLYFAWEKKVPR 530

Query: 247 LVLETDSSRVASFFQDEAGD 256
           + LE DS  +  F +    D
Sbjct: 531 VELEVDSEVIVGFLKTGISD 543

BLAST of Lcy13g010990 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.2e-55
Identity = 126/329 (38.30%), Postives = 173/329 (52.58%), Query Frame = 0

Query: 3    WWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHC 62
            WW G WKM IPNKIK+FLWRL LDRLPT  NL  RG ++ N C  C R GE S+H+FW C
Sbjct: 835  WWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWIC 894

Query: 63   KFMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFR 122
            KF  A+ + S+FG L       S F +LRE  + +    FE   VV+W +WN RN R F 
Sbjct: 895  KFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFN 954

Query: 123  GLEPVV-----GLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDA 182
                 V      LVEWA  Y   F++A S    G   V    ++ W+PP+ G YK+N DA
Sbjct: 955  DSTKTVFKIGMELVEWANKYAMEFREAKSNPITG--RVTNTAEILWQPPDEGIYKINTDA 1014

Query: 183  SFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLV 242
            SF       GLG+++ +  G+VM +A+    +++S +MAE  AAV+G +LA E+G+ P  
Sbjct: 1015 SFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHP-- 1074

Query: 243  LETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLA 302
                           A +D S+ G +V + +            F +REGN+ AH LA  A
Sbjct: 1075 ---------------ALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRA 1134

Query: 303  GRDEESRVWVESVP----QCVEGLILSDM 323
                E  +W+E  P     C+E   L ++
Sbjct: 1135 LLLHEFSIWMEDWPLELKSCLEMECLEEL 1137

BLAST of Lcy13g010990 vs. ExPASy TrEMBL
Match: A0A2N9GMW9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28622 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.6e-37
Identity = 105/325 (32.31%), Postives = 159/325 (48.92%), Query Frame = 0

Query: 4   WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
           WK +W+  +P KIK FLWR S D LPT   L  R      +C  CR   E SLH  W+C 
Sbjct: 451 WKRIWRARVPAKIKTFLWRASHDSLPTKSGLFRRQVTSNPLCDTCREQSEDSLHALWNCP 510

Query: 64  FMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFR- 123
            +  V   +   S + K+   S+ DL+R++        FE F    W +W+ RNQ + R 
Sbjct: 511 AVSQVWSLAPEFSDLQKLAPMSLSDLMRQIIQNNSDLLFEKFATTSWLLWHKRNQDRLRL 570

Query: 124 GLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRE 183
             +P   ++  A + +S +   T+         L    VRW+P  + ++KVN D +  RE
Sbjct: 571 PSDPHSQILPRAHALLSEYLAVTTE---NTPQKLQPPQVRWKPSSSNFFKVNFDGAIFRE 630

Query: 184 RWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLETDS 243
               GLGVV+RD++G V+ + S       + EM E  AA +  R A+E+G+  + LE D+
Sbjct: 631 SNTGGLGVVIRDTAGMVIATLSQKVTGNHTAEMIEALAARRAIRFAMEVGVTNVELEGDA 690

Query: 244 SRVASFFQDEAGDDFSDV--GALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRD 303
             V    +D    D  D   G ++ + +  +     F    TRR GN VAH LA  A + 
Sbjct: 691 VTV---IRDLGRLDPIDTPYGLVIEDAKVMLTEFQNFSLSHTRRSGNSVAHALARRASKC 750

Query: 304 EESRVWVESVPQCVEGLILSDMALL 326
               VW+E VP  +  ++L+D++ L
Sbjct: 751 NSYLVWMEEVPPDITHVLLNDLSAL 769

BLAST of Lcy13g010990 vs. ExPASy TrEMBL
Match: A0A2N9HS90 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42403 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.9e-36
Identity = 103/311 (33.12%), Postives = 151/311 (48.55%), Query Frame = 0

Query: 4    WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
            WK +W+  +P KIK FLWR S D LPT   L  R      +C  CR   E SLH  W+C 
Sbjct: 1292 WKRIWRARVPAKIKTFLWRASHDSLPTKSGLFRRQVTSNPLCDTCREQSEDSLHALWNCP 1351

Query: 64   FMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFR- 123
             +  V   +   S + K+   S+ DL+R++        FE F    W +W+ RNQ + R 
Sbjct: 1352 AVSQVWSLAPEFSDLQKLAPMSLSDLMRQIIQSNSDLLFEKFATTSWLLWHKRNQDRLRL 1411

Query: 124  GLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRE 183
              +P   ++  A + +S +   T+         L    VRW+PP + ++KVN D +  RE
Sbjct: 1412 PSDPHSQILPRAHALLSEYLAVTTE---NKPQKLQPPQVRWKPPSSNFFKVNFDGAIFRE 1471

Query: 184  RWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLETDS 243
                GLGVV+RD++G V+ + S       + EM E  AA +  R A+E+G+  + LE D+
Sbjct: 1472 YNTGGLGVVIRDTTGMVIATLSQKVTGNHTAEMIEALAARRAIRFAMEVGVTNVELEGDA 1531

Query: 244  SRVASFFQDEAGDDFSDV--GALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRD 303
              V    +D    D  D   G ++ + +  +     F    TRR GN VAH LA  A + 
Sbjct: 1532 ETV---IRDLCRTDPIDTPYGLVIEDAKVMLTEIQNFSLSHTRRSGNSVAHALARRASKC 1591

Query: 304  EESRVWVESVP 312
                VW+E VP
Sbjct: 1592 NSYLVWMEEVP 1596

BLAST of Lcy13g010990 vs. ExPASy TrEMBL
Match: A0A803QE56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-36
Identity = 100/327 (30.58%), Postives = 158/327 (48.32%), Query Frame = 0

Query: 1    MGWWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGG-ESSLHVF 60
            M WW+G+WK+ +P K+K F+W+++   LPT   L  RG DV   C  C  GG E+  H  
Sbjct: 1212 MAWWRGMWKLKLPPKVKHFVWKMANSWLPTHSALTSRGMDVDPRCSRCSNGGRENIFHAL 1271

Query: 61   WHCKFMRAVLMESEFGSLIHKVQAWSMFDLLR-EVKDKVGWGR--FELFVVVLWAVWNCR 120
            W C   + V     FG + H+++     D+L   ++    W +  FELF+VV W +W  R
Sbjct: 1272 WRCHANKDVW--KRFG-IQHQIKRQGSEDVLAFFMRISKAWEKETFELFLVVSWQLWYIR 1331

Query: 121  NQRKFRGLEP-VVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNV 180
            N  K  G++P    + EW   Y+  ++      G G      R     R P  G +K+NV
Sbjct: 1332 NNTKHGGIQPKATEVFEWCVQYLEEYR------GHGPTVTTGRGRGAQRVPHTGVWKINV 1391

Query: 181  DASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGP 240
            DA  +R R  +G+  V++DSSG V  ++S +      P  AE  A   G +  ++ G+  
Sbjct: 1392 DAGVKRGRGWSGVSCVIQDSSGCVSYASSTILHREYQPLHAELMAIHGGLQTGIQRGVQQ 1451

Query: 241  LVLETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAF 300
              +E+D        Q++  +   D+  ++  +R  +   +  G  F  RE N+VAH LA 
Sbjct: 1452 FYIESDCLEAIQLIQNKE-ESCRDIDGVLDHIRHLLSYANVKGLLFVYREANKVAHVLAN 1511

Query: 301  LAGRDEESRVWVESVPQCVEGLILSDM 323
             A  ++ S +W+   P C    IL D+
Sbjct: 1512 YALMNKASAMWIGINPPCANLAILQDL 1528

BLAST of Lcy13g010990 vs. ExPASy TrEMBL
Match: A0A2N9FJZ7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15395 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-36
Identity = 101/320 (31.56%), Postives = 156/320 (48.75%), Query Frame = 0

Query: 4    WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
            W+ +W + IP K ++F W+ + + LPT  NL  R   V  +C LC    E ++H  W C 
Sbjct: 1242 WRTIWSLHIPKKCQMFAWKATCEALPTKQNLYKRRLPVEPICELCGECNEDAIHALWSCN 1301

Query: 64   FMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQ-RKFR 123
             ++ V  +  +   I         DLL +V         E+F+ + WA+W  RN+ R  +
Sbjct: 1302 QLKLVWEKESWLQSIRSTPFVDFADLLTKVLHHGRDSEPEIFITLFWALWQRRNKLRLHQ 1361

Query: 124  GLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRE 183
             ++P+  +   A SY+  +  A+       +S       RW PP    YKVN D +  ++
Sbjct: 1362 EVDPINQVGPKAKSYLEEYLNASDQRKPQAQSAPV---ARWMPPSMLRYKVNYDGAVFKD 1421

Query: 184  RWQTGLGVVVRDSSGRVMLSASLVQRHV--RSPEMAEGWAAVKGTRLAVEMGLGPLVLET 243
              + G+G++VRDSSGRVM  ASLVQ+ +   S    E WAA +  + A+E+GL     E 
Sbjct: 1422 TNEAGIGIIVRDSSGRVM--ASLVQKVLFPHSIPSIEAWAAKRSIQFALEIGLPEAEFEG 1481

Query: 244  DSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRD 303
            DS  + S  +D      +  G L+A+ +        F     +R+GN +AH LA  A   
Sbjct: 1482 DSQIIVSALKD-THPSLAPFGLLIADAKDLARKLQRFSFLHVKRQGNGLAHALARKAQFC 1541

Query: 304  EESRVWVESVPQCVEGLILS 321
                VW+E+VP  +E L LS
Sbjct: 1542 NSLEVWMEAVPPDLEHLYLS 1555

BLAST of Lcy13g010990 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-54
Identity = 126/329 (38.30%), Postives = 173/329 (52.58%), Query Frame = 0

Query: 3    WWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHC 62
            WW G WKM IPNKIK+FLWRL LDRLPT  NL  RG ++ N C  C R GE S+H+FW C
Sbjct: 835  WWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWIC 894

Query: 63   KFMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFR 122
            KF  A+ + S+FG L       S F +LRE  + +    FE   VV+W +WN RN R F 
Sbjct: 895  KFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFN 954

Query: 123  GLEPVV-----GLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDA 182
                 V      LVEWA  Y   F++A S    G   V    ++ W+PP+ G YK+N DA
Sbjct: 955  DSTKTVFKIGMELVEWANKYAMEFREAKSNPITG--RVTNTAEILWQPPDEGIYKINTDA 1014

Query: 183  SFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLV 242
            SF       GLG+++ +  G+VM +A+    +++S +MAE  AAV+G +LA E+G+ P  
Sbjct: 1015 SFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHP-- 1074

Query: 243  LETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLA 302
                           A +D S+ G +V + +            F +REGN+ AH LA  A
Sbjct: 1075 ---------------ALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRA 1134

Query: 303  GRDEESRVWVESVP----QCVEGLILSDM 323
                E  +W+E  P     C+E   L ++
Sbjct: 1135 LLLHEFSIWMEDWPLELKSCLEMECLEEL 1137

BLAST of Lcy13g010990 vs. NCBI nr
Match: XP_042965942.1 (uncharacterized protein LOC122299620 [Carya illinoinensis])

HSP 1 Score: 165.6 bits (418), Expect = 7.0e-37
Identity = 106/323 (32.82%), Postives = 164/323 (50.77%), Query Frame = 0

Query: 4    WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
            WK +WKM +P KI+IF W+L  D LPT  NL  R  D+   C LC    E   H   +C 
Sbjct: 1053 WKAIWKMKLPLKIRIFAWKLCKDCLPTGLNLIKRHVDIDPKCCLCAEQNEDLSHAIVYC- 1112

Query: 64   FMRAVLMESEFGSL--IHKVQAWSMF-DLLREVKDKVGWGRFELFVVVLWAVWNCRNQRK 123
                 L+E   G L  +  +Q   +F DL+  V +K      + F ++ W+ W  RN RK
Sbjct: 1113 ---PQLIEFWKGQLPKLFDIQKPILFIDLINHVHNKGTTEELQFFCLIAWSFWYRRN-RK 1172

Query: 124  FRGLE--PVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDAS 183
               L   P+  +V+ A S  SSF     +C         + +  W PP  G+ K+NVD +
Sbjct: 1173 IHDLVVLPIKQVVDHALSVQSSF----VSCSQQKNPDHIKLNGLWSPPPEGFLKLNVDGA 1232

Query: 184  FRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVL 243
               ++ + G+G V+RD  G V+L+AS ++ ++  PE  E  A ++G +L ++ G+  LV+
Sbjct: 1233 LFFDQKKAGIGAVLRDGRGEVILAASKMECYIEEPETIELVAILRGLQLCIQSGISKLVV 1292

Query: 244  ETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAG 303
            E+D   +    Q E   D S +G L +E+++ M       C+   R GN  AH+LA +A 
Sbjct: 1293 ESDCKLLVEILQQEPQQDASQLGNLTSEVKRLMSLFEICLCKHVSRVGNRAAHKLARMAW 1352

Query: 304  RDEESRVWVESVPQCVEGLILSD 322
              ++  VW ESVP+ +  +I  D
Sbjct: 1353 NVDDLVVWGESVPEPIAHVIWVD 1366

BLAST of Lcy13g010990 vs. NCBI nr
Match: XP_023880912.1 (uncharacterized protein LOC111993298 [Quercus suber])

HSP 1 Score: 156.8 bits (395), Expect = 3.3e-34
Identity = 101/321 (31.46%), Postives = 154/321 (47.98%), Query Frame = 0

Query: 3    WWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHC 62
            +WK +WK+ +PNKIK FLWR+  + LPT DNL  R       C  C +  E++ H  W C
Sbjct: 847  FWKRLWKLHVPNKIKFFLWRVCSNVLPTKDNLKKRKILDDARCSACLQDQETAFHALWSC 906

Query: 63   KFMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKF- 122
            + ++ +                 M +L+  V  +      ELF VV W +W  RN+ +  
Sbjct: 907  ESLKEIWNPCFSWVRTEVPYLQDMLELINLVGQRA--NGLELFGVVAWCIWTYRNKLRLN 966

Query: 123  -RGLEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFR 182
             +G+ P   L E A SY+  FQ          R    +E+ +W PP  G +K N D +  
Sbjct: 967  EKGV-PSDKLFETARSYLLDFQSKFQV----TRGQQRKENTKWLPPGDGLFKANYDGAVF 1026

Query: 183  RERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLET 242
             E  + G+GV+VRDS G V+ + +    ++ S E+ E  AA +  +  VE+GL     E 
Sbjct: 1027 AESEEAGIGVIVRDSKGDVLAALAEKIPYLGSVEVLEALAARRAAKFVVELGLTAAEFEG 1086

Query: 243  DSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRD 302
            DS  V +  +  A +  S +G ++ +    +     F    TRR+GN VAH LA  A   
Sbjct: 1087 DSEVVWTALK-VANEAHSAMGVIIKDTLSIVGSLRTFSFSHTRRQGNCVAHALAKRAIVS 1146

Query: 303  EESRVWVESVPQCVEGLILSD 322
                VW+E VP  +  +++SD
Sbjct: 1147 FPLLVWMEHVPTDISHVVISD 1159

BLAST of Lcy13g010990 vs. NCBI nr
Match: XP_030509082.1 (uncharacterized protein LOC115723746 [Cannabis sativa])

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-34
Identity = 86/310 (27.74%), Postives = 149/310 (48.06%), Query Frame = 0

Query: 3   WWKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHC 62
           WWK +W + IP KI+ F++RL+ + +PT +NL  R C    +C  C    ES  H  + C
Sbjct: 7   WWKSLWSLPIPPKIRHFVFRLAQNSIPTAENLYHRHCLSSPICPRCNLCYESVQHALFEC 66

Query: 63  KFMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFR 122
           + M+     + F S I   +  +M D++  ++       F LF+ +LW  WN RN   FR
Sbjct: 67  RIMKKAWSGTFFNSAIKDTKHLNMLDIIMYIQLNFSADAFNLFLCMLWKCWNARNAAVFR 126

Query: 123 GLEP-VVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRR 182
             +   V + + A  Y+  +Q A        +S      + W PP  G  K+N DA+   
Sbjct: 127 NQDSRPVRIEQKAQDYLDFYQAAQDKRKTQTQSTTDLNLLAWEPPPVGTLKLNTDAAVSN 186

Query: 183 ERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLETD 242
            + +TG GV+VRD +G+V+ + +  +      ++AEGW  ++G + + + G     +E D
Sbjct: 187 HQNRTGGGVLVRDHTGKVLAATAFNRMGQMQSQVAEGWVLLEGLKWSRDNGFNIQHIEVD 246

Query: 243 SSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRDE 302
              + +  Q    ++ S  G+++  +R+ +          TRR+GN  AH LA ++   +
Sbjct: 247 CKNLLTDLQ-STNENLSSYGSIINAIRRMLSSLPTVTLHHTRRQGNTAAHNLAQMSIGLD 306

Query: 303 ESRVWVESVP 312
            +  W    P
Sbjct: 307 NTWYWNSQDP 315

BLAST of Lcy13g010990 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 155.2 bits (391), Expect = 9.5e-34
Identity = 95/309 (30.74%), Postives = 148/309 (47.90%), Query Frame = 0

Query: 4    WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
            W  +W + +P KI+IF+WR + + LP+ +NL  R       C LC+ G E+  H    CK
Sbjct: 809  WNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCK 868

Query: 64   FMRAVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQRKFRG 123
              + V   S F   I       +  LL  VK        +LF V+LWA WN RNQ  F+G
Sbjct: 869  AAKKVWRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVDLFAVMLWAKWNARNQWLFKG 928

Query: 124  -LEPVVGLVEWATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRE 183
              E    +V  A + + ++++   +  V          + W PP+ G+ K+N DA+   E
Sbjct: 929  KRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLGWNPPQEGFVKINTDAATNSE 988

Query: 184  RWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEMGLGPLVLETDS 243
            +   GLG V+RD +G+V  +A  V +   S   AE  A   G ++A +  +  +++E+DS
Sbjct: 989  KNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAMEWGLQVAKDAHVKDVIMESDS 1048

Query: 244  SRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNEVAHQLAFLAGRDEE 303
              V S   +  G   S++  +V E++K         C +T R  N +AH L  +A    E
Sbjct: 1049 QEVVSLVNNRQGSR-SEIYWVVLEIQKLKESFDHVSCVYTHRSCNAIAHSLVKIALEKCE 1108

Query: 304  SRVWVESVP 312
            + VW  S P
Sbjct: 1109 TVVWKGSYP 1116

BLAST of Lcy13g010990 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 4.6e-18
Identity = 72/306 (23.53%), Postives = 130/306 (42.48%), Query Frame = 0

Query: 5   KGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCKF 64
           + +WK+ +  KIK FLWR     L T   L  R  D   +C  C    E+  H+ ++C +
Sbjct: 35  QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94

Query: 65  MRAV------LMESEFGSLIHKVQAWSMFDLLREVKDKVGWGRFELFVVVLWAVWNCRNQ 124
            ++V      ++ +++G         +    L + +      RF  F  ++W +W  RN 
Sbjct: 95  TQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPF-WIMWRLWKSRNV 154

Query: 125 RKFR------GLEPVVGLVEWATSYISSFQQATSACGVGVRS----VLAREDVRWRPPEA 184
             F+        E   G+ + AT ++++  + T    V V +       R+  +W PP  
Sbjct: 155 FLFQQKCQSPDYEARKGIQD-ATEWLNA-NETTENTNVHVATNPIQTSRRDSSQWNPPPE 214

Query: 185 GWYKVNVDASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLA 244
           GW K N D+ + +    T  G  +R+ +G ++L  +   +       AE    +   ++ 
Sbjct: 215 GWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFLHALQVI 274

Query: 245 VEMGLGPLVLETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNE 295
              GL  +  E+DS  + +   +  G+D S +G L+ ++R  M    +    F  RE N 
Sbjct: 275 WAHGLRYVWFESDSKSLVTLINN--GEDHSLLGTLIYDIRHWMLKLPYCSLEFVNRERNS 334

BLAST of Lcy13g010990 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-16
Identity = 73/306 (23.86%), Postives = 132/306 (43.14%), Query Frame = 0

Query: 4   WKGVWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCK 63
           ++ +WK     KI+ FLW+   + LP    L  R     + C  C    E+  H+ + C 
Sbjct: 254 YQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCT 313

Query: 64  FMR--------AVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGR-FELFVVVLWAVWN 123
           F R         + +  E+   I+ V  + +F+L         W +  +L   +LW +W 
Sbjct: 314 FARLTWAISSIPIPLGGEWADSIY-VNLYWVFNL---GNGNPQWEKASQLVPWLLWRLWK 373

Query: 124 CRNQRKFRGLE-PVVGLVEWATSYISSFQQATSACGVGVRSVLAREDV-RWRPPEAGWYK 183
            RN+  FRG E     ++  A   +  ++  T A   G +  + R    RWRPP   W K
Sbjct: 374 NRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVK 433

Query: 184 VNVDASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAE----GWAAVKGTRLA 243
            N DA++ R+  + G+G V+R+  G V    +     ++S   AE     WA +  +R  
Sbjct: 434 CNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQ 493

Query: 244 VEMGLGPLVLETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFGCRFTRREGNE 295
                  ++ E+DS  +     ++  + +  +   + +L++ +   +     F  REGN 
Sbjct: 494 YNY----VIFESDSQVLIEILNND--EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNT 549

BLAST of Lcy13g010990 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-14
Identity = 66/261 (25.29%), Postives = 105/261 (40.23%), Query Frame = 0

Query: 7   VWKMFIPNKIKIFLWRLSLDRLPTIDNLGIRGCDVLNVCGLCRRGGESSLHVFWHCKFMR 66
           +WK+    KIK FLW+L    L T DNL  R       C  C +  E+S H+F+ C + +
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 67  AVLMESEFGSLIHKVQAWSMFDLLREVKDKVGWGR----FELFVVVLWAVWNCRNQRKFR 126
            V   S       +    +M   +  +       R    F L + +LW +W  RNQ  F+
Sbjct: 78  QVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQ 137

Query: 127 --------GLEPVVGLV-EW--ATSYISSFQQATSACGVGVRSVLAREDVRWRPPEAGWY 186
                    L+     V EW    +Y+ S  Q   +     +  +AR   +W+ P + W 
Sbjct: 138 QKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHS-SRHQQPTMAR--TKWQRPPSTWI 197

Query: 187 KVNVDASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGTRLAVEM 246
           K N D +F  +      G ++RD +G  M S   +         +E  A +   + A   
Sbjct: 198 KYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQ 257

Query: 247 GLGPLVLETDSSRVASFFQDE 253
           G   ++ E DS +V     +E
Sbjct: 258 GYRKVIFEGDSKQVEELMNNE 275

BLAST of Lcy13g010990 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-09
Identity = 65/273 (23.81%), Postives = 119/273 (43.59%), Query Frame = 0

Query: 45  CGLCRRGGESSLHVFWHCKFMRAV--------LMESEFGSLIHKVQAWSMFDLLREVK-- 104
           C  C    E+  H+ + C F R V          E E+   ++    W + +L  E+   
Sbjct: 12  CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYW-VLNLEVEIPKL 71

Query: 105 DKVGWGRFELFVVVLWAVWNCRNQRKFRGLE---------PVVGLVEWATSYISSFQQAT 164
            K+G     L   +LW +W  RN+  F+G E          +    EW+T      +   
Sbjct: 72  GKIG----NLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRR----ELEG 131

Query: 165 SACGVGVRSVLAREDVRWRPPEAGWYKVNVDASFRRERWQTGLGVVVRDSSGRVM-LSAS 224
            A G  V   L+   V+W+ P   W K N DA+++ E  + G+G ++R+ SG V+ + A 
Sbjct: 132 KASGPQVERNLS---VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGAR 191

Query: 225 LVQR--HVRSPEM-AEGWAAVKGTRLAVEMGLGPLVLETDSSRVASFFQDEAGDDFSDVG 284
            + R  +V   E+ A  WA +  +R   +     ++ E+D+  + +    +  D +  + 
Sbjct: 192 ALPRTKNVLEAELEALRWAVLTMSRFNYKR----IIFESDAQALVNLLNSD--DFWPTLQ 251

Query: 285 ALVAELRKDMPGPSFFGCRFTRREGNEVAHQLA 295
             + ++++ +         FT R GN+VA ++A
Sbjct: 252 PALEDIQQLLHHFEEVKFEFTPRGGNKVADRIA 266

BLAST of Lcy13g010990 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 44/223 (19.73%), Postives = 83/223 (37.22%), Query Frame = 0

Query: 108 VLWAVWNCRNQRKFR----GLEPVVGLV-----EWATSYISSFQQATSACGVGVRSVLAR 167
           ++W +W   N   F       +  V +      EW  + +++ QQ       G R+    
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQN------GNRNADPS 106

Query: 168 EDVRWRPPEAGWYKVNVDASFRRERWQTGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEG 227
            + +W PP     K N DAS       +GLG ++R+S G V+       +   + E AE 
Sbjct: 107 RNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAEC 166

Query: 228 WAAVKGTRLAVEMGLGPLVLETDSSRVASFFQDEAGDDFSDVGALVAELRKDMPGPSFFG 287
              +   + +   G   ++ E D+  +      ++ +    +   +  ++  +P      
Sbjct: 167 STLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN--PRLQHFLDTIQSWIPSFESIE 226

Query: 288 CRFTRREGNEVAHQLAFLAGRDEESRVWVESVPQCVEGLILSD 322
             F  RE N  A  LA  A ++        S P  +   + +D
Sbjct: 227 FSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSPYVNND 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F68.4e-1726.54Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1DAR46.2e-5538.30uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A2N9GMW97.6e-3732.31Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28622 PE=4 SV=1[more]
A0A2N9HS902.9e-3633.12RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42403 ... [more]
A0A803QE563.8e-3630.58Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9FJZ73.8e-3631.56Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15395 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022150918.11.3e-5438.30uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_042965942.17.0e-3732.82uncharacterized protein LOC122299620 [Carya illinoinensis][more]
XP_023880912.13.3e-3431.46uncharacterized protein LOC111993298 [Quercus suber][more]
XP_030509082.14.3e-3427.74uncharacterized protein LOC115723746 [Cannabis sativa][more]
XP_024956542.19.5e-3430.74uncharacterized protein LOC112498908 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT2G02650.14.6e-1823.53Ribonuclease H-like superfamily protein [more]
AT4G29090.14.3e-1623.86Ribonuclease H-like superfamily protein [more]
AT3G25270.13.1e-1425.29Ribonuclease H-like superfamily protein [more]
AT2G34320.13.0e-0923.81Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT5G65005.14.9e-0419.73Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 170..298
e-value: 4.1E-11
score: 45.0
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 3..67
e-value: 1.1E-15
score: 58.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 174..294
e-value: 3.6E-19
score: 68.8
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 3..248
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 3..248
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 173..294
e-value: 1.61403E-16
score: 72.732
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 169..298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g010990.1Lcy13g010990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity