Lcy13g009350 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g009350
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	17.8 kDa class I heat shock protein-like
Location	Chr13: 9457267 .. 9459806 (-)
RNA-Seq Expression	Lcy13g009350
Synteny	Lcy13g009350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTATTCGACCGAACAAATTGTTCTGGCTTGCTAGTAATAAATTTTTAGAAAAAGCATAAATTATACTTTTTTTTTTAAAAAAAAAAAGGAAATGCATTAAAAGCTGAAAGAGTTAGAATTAATTACATCATAAAGAAGCTCAACCATCCAGCTAGGGGAGGCCCAGCCAAAAGACAGCGTTTTCTTCTGAAGTAGAAGAAGAACCAAAAACCGAAAAACGAAAATCAGGGAGGGAGAAACAACAATGCGCGCCAAACGATAGGCATCGACATTCCTAGCTCACGGGCTAAAATTAAACTAAATTTCTCCCAAACTCTCGCACATCTGGACAATCTTCTCTGCTATGAAGGCGTTTTCCATAAGGTCATCAACTTCTTTGTTGAGGAGGTTAATGGCTCCAGCTGAATCCTATTTGATCATGATGGGTGGGATGACCAAATCTGGATGAATCGCTTTCAGGAAAGGTATGTTTCGAATCCCTTCATGAATAGCTTTTAGTTCGAGCGTTTTCACTGACCAAGCTTTGCGTATCTTCTTGAATCCAAGGCTGATCAAAGATCCTGAGGAGTCACCGCAGGATCCACCCAAGTCCTCCACACCTCTGGCTCTCGCATTTTGAGGCATCGACGTTGAGTTTCCATCAGGCGCCGGCAGGGGAATCCAATTCTCGTGACTCGTGAGGCTCTTTAATTTGTAGTCGAATCAGCTGATCTGGTCTGGTAAGTTGCTCCAAAAATTTCTTATTGGTCTGAGAACCACTCCATATTTCTGATGATTTGGTTTTTGTCTCGTCCGGCCTCCCGGTGGAGGATGTTGTTCCTGTGAGTCCATATGCTCCAAAGGATTAAGATTGATTTTTCCAATTCCTCTTTGGACAAGTTGTCCAAAAGCCAATGCCAGTAGTCAATCGGCTTCCACGAAGCCCAATTCAAAACAAAAAGATTTTTAGTTGGGGAAAAGTAGGATCTCCATATCTTTTTTGTAATTTTGCCATTCCTTTGTTCCATGTTATCACACACATTTAATTCTATGTAAGGATTATTTTTGTCTAAAATATATGACAAATGATTATTTTTGTCTAAAATATATGACAAAAGTCGAAGTGTTAGATATTTCAAAAAAAAAAAAAAATCGAAGTGTTAGAATATTTCTATTGGTCGATCATGTCACGTAGATCTGAGTTAAGCATCCAATTACTTTGATTTTAGTTTTCACAGAGCCTTTCTCCAAATGCCCAAATTGATACACCTTTTGTGCATGTTGGAACTAATCCGATAAGAAATGTCACTACCTCTACCTCATGACCGTTATAGTTACGAACACATTAAATTTGAGAAAGAGAGAATTGAGAGATTTATTGGAAGAAAGAGAGGAATGAGCAAGCGAACAATACTTGGTTCCACATCGGTGTTAGTATACACACCACTATTAATAAAATGTTACAACTAAGAGTATGTGTGGCTCACATAATTGATGTTAGATTATGGAAATTGTCAGCCTTATCAAATAATTTCTGGGTGGGTTGAGTGGCTCACCTTTTTTTAGGATGTTAGATTTTATTTTCATTTTTATTTGTTTATTTTGAGACAAGGATGTTAGATTTTTCTTCTTTTTTTTCATTTTTATTTATTTATTTTGAGATAAGGGTGTTAGATATTTTAGAACACTCCGTCCACACCAATAATGGAAATCTAGAAATCTTGTACATTCCGATTTTTATCTCCAATAATGGAAATAAAAGACGAGAATATCTCCTATTTAAGAGCTTCAGTTGCAGTGCGCAGTCCATGAAAATCAAATCCACAGCAACAACCGAACTCCCATTTCCACCAAATTTCACTGTTATCAAAACCCATGTCACTGATTCGGAGGATGACCGGCGGGCGGCGGAGCAGCGTCTACGATCCCTTCTCATTGGACAATTGGGATCCATTCGAACCCGCCTCTGCTTTCATGGACACTCGAATCGACTGGAAAGAGACTCCAAATTCTCACATCTTCAAGGCCGATCTACCCGGAATCAAAAAGGAAGAAGTGAGAGTTGAAGTCGAAGAGGGCAGAATTCTGCAGATCAGTGGGGAGAGAAGCAGAGAGCAGCAGGAGGAGACCGATGAGTGGCACAGAATCGAGCGGAGCAGTGGGAAGTTCTTGAGGAGATTCAGATTGCCGGAGAATGCGAAAGTGGCCGAGGAGATAAATGCGAGCATGGAGGATGGAATTTTGACTGTGACAGTGGCGAAGATGGAAGATAAGAAGCCTGAAATTAAGTCCATTGCGATCTCTGGTTAGATATGCGTTGCGTTTTGTAAAATTATGTATATGAAGATGTGATGATGTTCGTGAGTTTTCTTCTTCTTTTGGATTCAGAAATTTGAAAGTTGGGTTTGTTTTTGTGCTTCTTCTTATGTGATGATCTCTGGTTAGAGTATTGAATGTTGGATCCGACTGTTAGGAACTGCGGATTTTTGTTTAATTGGTTTTTGCAACTGGAAGACATTGAAATTGGGATAATGCTGATGATGGCACGAAATATCTGGC

mRNA sequence

ACTTATTCGACCGAACAAATTGTTCTGGCTTGCTAGTAATAAATTTTTAGAAAAAGCATAAATTATACTTTTTTTTTTAAAAAAAAAAAGGAAATGCATTAAAAGCTGAAAGAGTTAGAATTAATTACATCATAAAGAAGCTCAACCATCCAGCTAGGGGAGGCCCAGCCAAAAGACAGCGTTTTCTTCTGAAGTAGAAGAAGAACCAAAAACCGAAAAACGAAAATCAGGGAGGGAGAAACAACAATGCGCGCCAAACGATAGGCATCGACATTCCTAGCTCACGGGCTAAAATTAAACTAAATTTCTCCCAAACTCTCGCACATCTGGACAATCTTCTCTGCTATGAAGGCGTTTTCCATAAGGTCATCAACTTCTTTGTTGAGGAGGTTAATGGCTCCAGCTGAATCCTATTTGATCATGATGGGTGGGATGACCAAATCTGGATGAATCGCTTTCAGGAAAGGCTGATCAAAGATCCTGAGGAGTCACCGCAGGATCCACCCAAGTCCTCCACACCTCTGGCTCTCGCATTTTGAGGCATCGACGTTGAGTTTCCATCAGGCGCCGGCAGGGGAATCCAATTCTCGTGACTCGTGAGGCTCTTTAATTTGTAGTCGAATCAGCTGATCTGGTCTGTGCGCAGTCCATGAAAATCAAATCCACAGCAACAACCGAACTCCCATTTCCACCAAATTTCACTGTTATCAAAACCCATGTCACTGATTCGGAGGATGACCGGCGGGCGGCGGAGCAGCGTCTACGATCCCTTCTCATTGGACAATTGGGATCCATTCGAACCCGCCTCTGCTTTCATGGACACTCGAATCGACTGGAAAGAGACTCCAAATTCTCACATCTTCAAGGCCGATCTACCCGGAATCAAAAAGGAAGAAGTGAGAGTTGAAGTCGAAGAGGGCAGAATTCTGCAGATCAGTGGGGAGAGAAGCAGAGAGCAGCAGGAGGAGACCGATGAGTGGCACAGAATCGAGCGGAGCAGTGGGAAGTTCTTGAGGAGATTCAGATTGCCGGAGAATGCGAAAGTGGCCGAGGAGATAAATGCGAGCATGGAGGATGGAATTTTGACTGTGACAGTGGCGAAGATGGAAGATAAGAAGCCTGAAATTAAGTCCATTGCGATCTCTGGTTAGATATGCGTTGCGTTTTGTAAAATTATGTATATGAAGATGTGATGATGTTCGTGAGTTTTCTTCTTCTTTTGGATTCAGAAATTTGAAAGTTGGGTTTGTTTTTGTGCTTCTTCTTATGTGATGATCTCTGGTTAGAGTATTGAATGTTGGATCCGACTGTTAGGAACTGCGGATTTTTGTTTAATTGGTTTTTGCAACTGGAAGACATTGAAATTGGGATAATGCTGATGATGGCACGAAATATCTGGC

Coding sequence (CDS)

ATGTCACTGATTCGGAGGATGACCGGCGGGCGGCGGAGCAGCGTCTACGATCCCTTCTCATTGGACAATTGGGATCCATTCGAACCCGCCTCTGCTTTCATGGACACTCGAATCGACTGGAAAGAGACTCCAAATTCTCACATCTTCAAGGCCGATCTACCCGGAATCAAAAAGGAAGAAGTGAGAGTTGAAGTCGAAGAGGGCAGAATTCTGCAGATCAGTGGGGAGAGAAGCAGAGAGCAGCAGGAGGAGACCGATGAGTGGCACAGAATCGAGCGGAGCAGTGGGAAGTTCTTGAGGAGATTCAGATTGCCGGAGAATGCGAAAGTGGCCGAGGAGATAAATGCGAGCATGGAGGATGGAATTTTGACTGTGACAGTGGCGAAGATGGAAGATAAGAAGCCTGAAATTAAGTCCATTGCGATCTCTGGTTAG

Protein sequence

MSLIRRMTGGRRSSVYDPFSLDNWDPFEPASAFMDTRIDWKETPNSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG

Homology

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BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-50
Identity = 98/158 (62.03%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPF--------------EPASAFMDTRIDWKETPNS 60
           MS+I    GGRRS+V+DPFSLD WDPF              +  +AF++T IDWKETP +
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPE 120
           H+FKADLPG+KKEEV+VE+EEG++LQISGER++E++E+ D+WHR+ERSSGKFLRRFRLPE
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           NAKV +E+ A+M +G++TVTV K+E KKPE+K+I ISG
Sbjct: 121 NAKV-DEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 4.3e-50
Identity = 98/157 (62.42%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------PA---SAFMDTRIDWKETPNSH 60
           MSL+    GGRR++V+DPFSLD WDPFE          PA   +AF + ++DW+ETP +H
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPEN 120
           +FKAD+PG+KKEEV+VEVE+G ILQISGERS E +E++D WHR+ERSSGKF+RRFRLPEN
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           AKV EE+ ASME+G+L+VTV K+++ KPE+KS+ ISG
Sbjct: 121 AKV-EEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-49
Identity = 98/159 (61.64%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE---------------PASAFMDTRIDWKETPN 60
           MSLI    GGRRS+V+DPFSLD WDPF+                 SAF+ TR+DWKETP 
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  SHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLP 120
           +H+FKADLPG+KKEEV+VE+E+ R+LQISGERS E++++ D+WHR+ERSSGKF+RRFRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLP 120

Query: 121 ENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           ENAK+ +++ A+ME+G+LTVTV K E KKPE+K+I ISG
Sbjct: 121 ENAKM-DQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-49
Identity = 96/154 (62.34%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------PASAFMDTRIDWKETPNSHIFK 60
           MSLI    GGRRSSV+DPFSLD WDPF+            SAF+ TR+DWKETP +H+FK
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFK 60

Query: 61  ADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPENAKV 120
           AD+PG+KKEEV++E+++GR+LQISGER+ E++++ D WHR+ERSSGK +RRFRLPENAKV
Sbjct: 61  ADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKV 120

Query: 121 AEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
            +++ ASME+G+LTVTV K E KKP++K+I ISG
Sbjct: 121 -DQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-49
Identity = 95/154 (61.69%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------PASAFMDTRIDWKETPNSHIFK 60
           MSLI  + GGRRS+V+DPFSLD WDPF+            SAF++TR+DWKETP +H+F+
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFE 60

Query: 61  ADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPENAKV 120
           AD+PG+KKEEV+V++E+ R+LQISGER+ E++++ D WHR+ERSSG F+RRFRLPENAKV
Sbjct: 61  ADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKV 120

Query: 121 AEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
            E++ ASME+G+LTVTV K E KKP++K+I ISG
Sbjct: 121 -EQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGI KEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ ASME+G+LTVTV KME+KKPEIKSI ISG
Sbjct: 121 PENAKV-EEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV KME+KKPEIKSI I+G
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV KME+KKPEIKSI I+G
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.4e-53
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           MSLI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV K+E+KKPEIKSI ISG
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL
Match: A0A1S3CQK2 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC103503166 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.4e-53
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           MSLI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV K+E+KKPEIKSI ISG
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of Lcy13g009350 vs. NCBI nr
Match: XP_022138993.1 (17.3 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 114/162 (70.37%), Postives = 130/162 (80.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE------------------PASAFMDTRIDWKE 60
           MSLI  + GGRRS+++DPFSLD WDPFE                    SAF  TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60

Query: 61  TPNSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRF 120
           TP +H+FKADLPGIKKEEV+VEVEEGR+LQISGERSREQ+E+ D+WHRIERSSGKF+RRF
Sbjct: 61  TPEAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           RLPENAKV EE+ ASME+G+LTVTV KME+KKPEIKSI ISG
Sbjct: 121 RLPENAKV-EEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of Lcy13g009350 vs. NCBI nr
Match: XP_022138990.1 (17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_022138991.1 17.8 kDa class I heat shock protein-like isoform X2 [Momordica charantia])

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53
Identity = 113/162 (69.75%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE------------------PASAFMDTRIDWKE 60
           MSLI  + GGRRS+++DPFSLD WDPF+                    SAF +TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNCTALANAHSSASETSAFANTRIDWKE 60

Query: 61  TPNSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRF 120
           TP +H+FKADLPGIKKEEV+VEVEEGR+LQISGERSREQ+E+ D+WHRIERSSGKF+RRF
Sbjct: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           RLPENAKV EE+ ASME+G+LTVTV KME+KKPEIKSI ISG
Sbjct: 121 RLPENAKV-EEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of Lcy13g009350 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 9.0e-53
Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGI KEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHR+ERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ ASME+G+LTVTV KME+KKPEIKSI ISG
Sbjct: 121 PENAKV-EEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lcy13g009350 vs. NCBI nr
Match: XP_008463198.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97577.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 9.0e-53
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV KME+KKPEIKSI I+G
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lcy13g009350 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 111/160 (69.38%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------------PASAFMDTRIDWKETP 60
           M+LI  + GGRRS+V+DPFSLD WDPFE                  SAF +TRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSSSLANIPSSARETSAFANTRIDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +HIFKADLPGIKKEEV+VEVEEGR+LQISGERS+EQ+E+ D+WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAKV EE+ A+ME+G+LTVTV KME+KKPEIK+I ISG
Sbjct: 121 PENAKV-EEVKANMENGVLTVTVPKMEEKKPEIKTIDISG 159

[Close]

BLAST of Lcy13g009350 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-51
Identity = 98/157 (62.42%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----------PA---SAFMDTRIDWKETPNSH 60
           MSL+    GGRR++V+DPFSLD WDPFE          PA   +AF + ++DW+ETP +H
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPEN 120
           +FKAD+PG+KKEEV+VEVE+G ILQISGERS E +E++D WHR+ERSSGKF+RRFRLPEN
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           AKV EE+ ASME+G+L+VTV K+++ KPE+KS+ ISG
Sbjct: 121 AKV-EEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lcy13g009350 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 3.4e-50
Identity = 100/158 (63.29%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE-----------PA---SAFMDTRIDWKETPNS 60
           MSLI  + GGRR++V+DPFSLD +DPFE           PA   +AF + ++DW+ETP +
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPE 120
           H+FKADLPG++KEEV+VEVE+G ILQISGERS E +E+ D+WHR+ERSSGKF RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           NAK+ EEI ASME+G+L+VTV K+ +KKPE+KSI ISG
Sbjct: 121 NAKM-EEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lcy13g009350 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 194.1 bits (492), Expect = 7.6e-50
Identity = 98/160 (61.25%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MSLIRRMTGGRRSSVYDPFSLDNWDPFE----PAS------------AFMDTRIDWKETP 60
           MSLI  + GGRRS+V+DPFS D WDPFE    P+S            AF + R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  NSHIFKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRL 120
            +H+FKADLPG+KKEEV+VEVE+  +LQISGERS+E +E+ D+WHR+ER+SGKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVAEEINASMEDGILTVTVAKMEDKKPEIKSIAISG 145
           PENAK+ EE+ A+ME+G+LTV V K  +KKP++KSI ISG
Sbjct: 121 PENAKM-EEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lcy13g009350 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-43
Identity = 83/143 (58.04%), Postives = 113/143 (79.02%), Query Frame = 0


Query: 11  RRSSVYDPFSLDNWDPFEPA---------SAFMDTRIDWKETPNSHIFKADLPGIKKEEV 70
           RRS+++DPFSLD WDPF+           SA ++ R+DW+ETP +H+FKADLPG+KKEEV
Sbjct: 12  RRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEV 71

Query: 71  RVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPENAKVAEEINASMEDG 130
           +VE+EE  +L+ISGER  E++++ D WHR+ERSSG+F RRFRLPEN K+ +++ A+ME+G
Sbjct: 72  KVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM-DQVKAAMENG 131

Query: 131 ILTVTVAKMEDKKPEIKSIAISG 145
           +LTVTV K E KK ++KSI ISG
Sbjct: 132 VLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Lcy13g009350 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-41
Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MSLIRRMTGGRR--SSVYDPFSLDNWDPFE----------PASAFMDTRIDWKETPNSHI 60
           MSLI    G  R  +S++DPFSLD WDPF+            SA  + R+DWKET  +H+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61  FKADLPGIKKEEVRVEVEEGRILQISGERSREQQEETDEWHRIERSSGKFLRRFRLPENA 120
           FKADLPG+KKEEV+VE+E+  +L+ISGER  E++E+ D WHR+ERSSG+F R+F+LPEN 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 121 KVAEEINASMEDGILTVTVAKMED--KKPEIKSIAISG 145
           K+ +++ ASME+G+LTVTV K+E+  KK ++KSI ISG
Sbjct: 121 KM-DQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Lcy13g009350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27396	2.0e-50	62.03	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P19036	4.3e-50	62.42	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]
P27880	1.7e-49	61.64	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P02519	2.2e-49	62.34	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P04793	3.7e-49	61.69	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]

BLAST of Lcy13g009350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAZ9	4.4e-53	70.00	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	4.4e-53	70.00	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	4.4e-53	70.00	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
A0A5D3DH18	7.4e-53	70.00	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQK2	7.4e-53	70.00	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC1035031...	[more]

BLAST of Lcy13g009350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138993.1	1.4e-53	70.37	17.3 kDa class I heat shock protein-like [Momordica charantia]	[more]
XP_022138990.1	2.4e-53	69.75	17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_02...	[more]
KAA0051547.1	9.0e-53	70.00	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]
XP_008463198.1	9.0e-53	70.00	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1...	[more]
XP_038892901.1	1.2e-52	69.38	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]

BLAST of Lcy13g009350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46230.1	3.1e-51	62.42	heat shock protein 17.4	[more]
AT1G53540.1	3.4e-50	63.29	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	7.6e-50	61.25	heat shock protein 18.2	[more]
AT2G29500.1	1.1e-43	58.04	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.9e-41	54.43	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 39..143 e-value: 1.2E-26 score: 92.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 29..144 score: 28.901337
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 7..144 e-value: 4.7E-43 score: 148.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 21..144
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..144
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 37..129 e-value: 7.79275E-42 score: 132.429
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g009350.1	Lcy13g009350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding