Lcy13g009310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g009310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	17.8 kDa class I heat shock protein-like
Location	Chr13: 9442873 .. 9443229 (-)
RNA-Seq Expression	Lcy13g009310
Synteny	Lcy13g009310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAGCATTTTCGACCCCTTTGATGGATTTCCATTGTCAACCTCATTGGCCACTACCCCTTCCTTTGCTGCTGAAGCCTCTGCTTTGGCCAACACTCGCATCGACTGGAAAGAAACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAAAAAAGAAGAAGTGAAAGTTGAGGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAGGAGGAGAAGAACGACAAATGGCATAGAATTGAGCGAAGCAGTGGAAAGTTCACGAGGAGATTCAGGCTGCCTGAGAATGCTAATGTTGAAGAAGTGA

mRNA sequence

ATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAGCATTTTCGACCCCTTTGATGGATTTCCATTGTCAACCTCATTGGCCACTACCCCTTCCTTTGCTGCTGAAGCCTCTGCTTTGGCCAACACTCGCATCGACTGGAAAGAAACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAAAAAAGAAGAAGTGAAAGTTGAGGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAGGAGGAGAAGAACGACAAATGGCATAGAATTGAGCGAAGCAGTGGAAAGTTCACGAGGAGATTCAGGCTGCCTGAGAATGCTAATGTTGAAGAAGTGA

Coding sequence (CDS)

ATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGCAGCATTTTCGACCCCTTTGATGGATTTCCATTGTCAACCTCATTGGCCACTACCCCTTCCTTTGCTGCTGAAGCCTCTGCTTTGGCCAACACTCGCATCGACTGGAAAGAAACCCCACAAGCCCACATCTTCACAGCCGATCTCCCTGGAATCAAAAAAGAAGAAGTGAAAGTTGAGGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAGGAGGAGAAGAACGACAAATGGCATAGAATTGAGCGAAGCAGTGGAAAGTTCACGAGGAGATTCAGGCTGCCTGAGAATGCTAATGTTGAAGAAGTGA

Protein sequence

MSLIPSIFGGRRSSIFDPFDGFPLSTSLATTPSFAAEASALANTRIDWKETPQAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRGDSGCLRMLMLKK

Homology

[Close]

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot
Match: P27397 (18.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-27
Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSS--------IFDPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MS+IPS FG RRS+        I+DPF  +PL TS  T+  F  E +A ANT IDWKETP
Sbjct: 1   MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAH+F ADLPG+KKEEVKVEVEEG+VLQISGER++ +   N
Sbjct: 61  QAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKN 101

[Close]

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1  MSLIPSIFGGRRSSIFDPFD--------GFPLSTSLATTPSFAAEASALANTRIDWKETP 60
          MS+IPS FGGRRS++FDPF          FPL TS A+   F  E +A  NT IDWKETP
Sbjct: 1  MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61 QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
          QAH+F ADLPG+KKEEVKVE+EEG+VLQISGER++ +   N
Sbjct: 61 QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKN 99

[Close]

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.2e-25
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIFDPFD--------GFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPS FGGRRS++FDPF          FP + S A + SF  E SA  +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNS-ALSASFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           +AH+F ADLPG+KKEEVKVE+E+ RVLQISGERS  +   N
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKN 100

[Close]

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.8e-25
Identity = 59/101 (58.42%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GF   +S     S A + +A  N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           +AH+F ADLPG+KKEEVKVEVE+  VLQISGERS+     N
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKN 101

[Close]

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot
Match: O82012 (17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 1   MSLIPSIFGGRRS-SIFDPF--DGFPLSTSLATTPSFAAEASALANTRIDWKETPQAHIF 60
           MSLIP IFG RRS S+FDPF  D F     L  T S + E SA ANTRIDWKETP+AH+F
Sbjct: 1   MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVF 60

Query: 61  TADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRG 107
            ADLPG+KKEEVKVEVEE RVLQISGER+  +   N  +    VE S G
Sbjct: 61  KADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKN--DTWHRVERSSG 107

[Close]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.6e-31
Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GFP S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 101

[Close]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL
Match: A0A1S3CQK2 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC103503166 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.6e-31
Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GFP S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 101

[Close]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL
Match: A0A6J1CC00 (18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111010100 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30
Identity = 77/103 (74.76%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIFDPF--------DGFPL--STSLATTPSFAAEASALANTRIDWKE 60
           MSLIPSIFGGRRS+IFDPF        DGFP   ST+LA  PS A+E SA ANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           TPQAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 103

[Close]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL
Match: A0A0A0KLU0 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30
Identity = 73/101 (72.28%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           M+L+PSIFGGRRS++F        DPF+GFP S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 101

[Close]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL
Match: A0A0A0KSB4 (Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5G190550 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30
Identity = 78/114 (68.42%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+G P S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRG 107
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N  E    +E S G
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN--EKWHRIERSSG 112

[Close]

BLAST of Lcy13g009310 vs. NCBI nr
Match: XP_038891912.1 (17.6 kDa class I heat shock protein 3-like [Benincasa hispida])

HSP 1 Score: 144.4 bits (363), Expect = 6.1e-31
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GFP STSLA  PS A++ASA ANTRIDWKETP
Sbjct: 85  MSLIPSIFGGRRSNVFDPFSLDILDPFEGFPFSTSLANIPSSASQASAFANTRIDWKETP 144

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRG 107
           +AHIF ADLPGIKKEEV+VEVEEGRVLQISGERS+ R   N  E    +E S G
Sbjct: 145 EAHIFKADLPGIKKEEVQVEVEEGRVLQISGERSKEREEKN--EKWHRIERSSG 196

[Close]

BLAST of Lcy13g009310 vs. NCBI nr
Match: XP_008465538.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK22768.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30
Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GFP S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 101

[Close]

BLAST of Lcy13g009310 vs. NCBI nr
Match: XP_004150235.2 (18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical protein Csa_021481 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 6.7e-30
Identity = 73/101 (72.28%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           M+L+PSIFGGRRS++F        DPF+GFP S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 101

[Close]

BLAST of Lcy13g009310 vs. NCBI nr
Match: XP_022139109.1 (18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 18.1 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 6.7e-30
Identity = 77/103 (74.76%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIFDPF--------DGFPL--STSLATTPSFAAEASALANTRIDWKE 60
           MSLIPSIFGGRRS+IFDPF        DGFP   ST+LA  PS A+E SA ANTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           TPQAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN 103

[Close]

BLAST of Lcy13g009310 vs. NCBI nr
Match: XP_004151581.1 (17.8 kDa class I heat shock protein [Cucumis sativus] >KGN50611.1 hypothetical protein Csa_021397 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 8.8e-30
Identity = 78/114 (68.42%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+G P S SLA  PS A E SA ANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRG 107
           QAHIF ADLPGIKKEEVKVEVEEGRVLQISGERS+ +   N  E    +E S G
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN--EKWHRIERSSG 112

[Close]

BLAST of Lcy13g009310 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 114.4 bits (285), Expect = 6.3e-26
Identity = 59/101 (58.42%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
           MSLIPSIFGGRRS++F        DPF+GF   +S     S A + +A  N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
           +AH+F ADLPG+KKEEVKVEVE+  VLQISGERS+     N
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKN 101

[Close]

BLAST of Lcy13g009310 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 3.1e-25
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1  MSLIPSIFGGRRSS--------IFDPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
          MSLIPSIFGGRR++        +FDPF+GF   + LA  P  A + +A  N ++DW+ETP
Sbjct: 1  MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61 QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTN 94
          +AH+F ADLPG++KEEVKVEVE+G +LQISGERS      N
Sbjct: 61 EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKN 99

[Close]

BLAST of Lcy13g009310 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MSLIPSIFGGRRSSIF--------DPFDGFPLSTSLATTPSFAAEASALANTRIDWKETP 60
          MSL+PS FGGRR+++F        DPF+GF L+  L   P  A + +A  N ++DW+ETP
Sbjct: 1  MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61 QAHIFTADLPGIKKEEVKVEVEEGRVLQISGERS 87
          +AH+F AD+PG+KKEEVKVEVE+G +LQISGERS
Sbjct: 61 EAHVFKADVPGLKKEEVKVEVEDGNILQISGERS 91

[Close]

BLAST of Lcy13g009310 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRSSIFDPF--DGFPLSTSLATTPSFAAEASALANTRIDWKETPQAHIF 60
           MS+IPS F   RRS+IFDPF  D +     L T+ S + E SA+ N R+DW+ETP+AH+F
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL-TSSSLSRENSAIVNARVDWRETPEAHVF 60

Query: 61  TADLPGIKKEEVKVEVEEGRVLQISGERSRRRRTTNGIELSEAVESSRG 107
            ADLPG+KKEEVKVE+EE  VL+ISGER   +   N  +    VE S G
Sbjct: 61  KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKN--DTWHRVERSSG 106

[Close]

BLAST of Lcy13g009310 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1  MSLIPSIFGGRR--SSIFDPF--DGFPLSTSLATTPSFAAEASALANTRIDWKETPQAHI 60
          MSLIPS FG  R  +SIFDPF  D +     L    S + E SA+ N R+DWKET +AH+
Sbjct: 1  MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61 FTADLPGIKKEEVKVEVEEGRVLQISGER 86
          F ADLPG+KKEEVKVE+E+  VL+ISGER
Sbjct: 61 FKADLPGMKKEEVKVEIEDDSVLKISGER 89

The following BLAST results are available for this feature:

BLAST of Lcy13g009310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27397	4.2e-27	61.39	18.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27396	2.1e-26	61.39	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27880	5.2e-25	60.40	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	8.8e-25	58.42	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
O82012	1.5e-24	62.39	17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]

BLAST of Lcy13g009310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DH18	8.6e-31	74.26	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQK2	8.6e-31	74.26	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC1035031...	[more]
A0A6J1CC00	3.3e-30	74.76	18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KLU0	3.3e-30	72.28	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 S...	[more]
A0A0A0KSB4	4.3e-30	68.42	Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5...	[more]

BLAST of Lcy13g009310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891912.1	6.1e-31	69.30	17.6 kDa class I heat shock protein 3-like [Benincasa hispida]	[more]
XP_008465538.1	1.8e-30	74.26	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493...	[more]
XP_004150235.2	6.7e-30	72.28	18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical p...	[more]
XP_022139109.1	6.7e-30	74.76	18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 1...	[more]
XP_004151581.1	8.8e-30	68.42	17.8 kDa class I heat shock protein [Cucumis sativus] >KGN50611.1 hypothetical p...	[more]

BLAST of Lcy13g009310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	6.3e-26	58.42	heat shock protein 18.2	[more]
AT1G53540.1	3.1e-25	55.45	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.7e-23	56.38	heat shock protein 17.4	[more]
AT2G29500.1	1.8e-20	53.21	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.3e-20	58.43	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 7..112 e-value: 1.2E-18 score: 69.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 25..93
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 47..91 e-value: 1.5E-7 score: 31.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 37..118 score: 13.866255
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..92
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g009310.1	Lcy13g009310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding