Lcy13g009270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g009270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Thioredoxin
Location	Chr13: 9381017 .. 9381788 (-)
RNA-Seq Expression	Lcy13g009270
Synteny	Lcy13g009270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTCAGATAAACAAACAAATAGGTCCTTTAGCTCACTTTTTCTTTGCTTTTTTTGTTCTGTAAAAAGAGATTGCAATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTACTCTTATCATTTGCAGCTTCTAACTATTTTCCTCCTTTCTTAACAAAATCTAAAACGGTTGCGATATTTTGTCGATAGGTCGTTGTGAATTTTACCGCAACATGGTGCGGCCCATGTCGTACCATGGCTCCTGTTCTTGAGGAGTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTTGATGAACTCGTGGTAAGTCAATCCTATTGGCTCATCCTGACTGTCACGGATTTACTCTTTTGAATTAGAAATTAAGTAATTATTAGGAGACAGTCACATTGAAACGACTACGTTTAATTTTTTTTTTTTTCTAGAGCGTTGCCGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTGGGGGCAAGGAAAGATCTGCTGCACAGTACTGTATTCAAATATGTTGCATGAAGCTGGCCTAAGAAAGATTGCTTTTGATAAACAATAATACTGCAAATGTAGCTAAGTTTAAGCATAAAATGAAAATGTTCTGTAACAATTTCACATATTTGTGTTCCATTGAGATAAAAAAGATCTTTGTTCTGGCATTTTGATC

mRNA sequence

TTCTTCTCAGATAAACAAACAAATAGGTCCTTTAGCTCACTTTTTCTTTGCTTTTTTTGTTCTGTAAAAAGAGATTGCAATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTCGTTGTGAATTTTACCGCAACATGGTGCGGCCCATGTCGTACCATGGCTCCTGTTCTTGAGGAGTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTTGATGAACTCGTGAGCGTTGCCGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTGGGGGCAAGGAAAGATCTGCTGCACAGTACTGTATTCAAATATGTTGCATGAAGCTGGCCTAAGAAAGATTGCTTTTGATAAACAATAATACTGCAAATGTAGCTAAGTTTAAGCATAAAATGAAAATGTTCTGTAACAATTTCACATATTTGTGTTCCATTGAGATAAAAAAGATCTTTGTTCTGGCATTTTGATC

Coding sequence (CDS)

ATGGCAGATATGGGGAAAGTGGTTTCATGCCACACTGTTGGCTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATGCAACAAACTGGTCGTTGTGAATTTTACCGCAACATGGTGCGGCCCATGTCGTACCATGGCTCCTGTTCTTGAGGAGTTGGCAAAAAAGACGAGTAATGATGTTATATTCTTAAAAGTGGACGTTGATGAACTCGTGAGCGTTGCCGATGAGTTGGGAGTTGGAGCTCTTCCTTCGTTTCAATTCTTCAAGAATGGAAAACTGGTGGACAAGTTCGTGGGGGCAAGGAAAGATCTGCTGCACAGTACTGTATTCAAATATGTTGCATGA

Protein sequence

MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVIFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA

Homology

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BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-31
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           ++ G+V++CHTV +W +QL KA +   LVVV+FTA+WCGPCR +AP   +LAKK  N V+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN-VL 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           FLKVD DEL SVA +  + A+P+F F K GK++DK VGA+KD L ST+ K++A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           A+ G+V+ CH +  W  QL  AKQ NKL+V++FTA+WC PCR +APV  +LAKK  +  I
Sbjct: 3   AEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAI 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           F KVDVDEL +VA E GV A+P+F   K+G +VDK VGARK+ LH+T+ K+
Sbjct: 63  FFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113

[Close]

BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-30
Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           A+ G+V+ CHTV +W +QL K      L+VV+FTA+WCGPCR +AP L ELAKK  N V 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPN-VT 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           FLKVDVDEL +VA E  V ++P+F F K GK++DK VGA+KD L  T+ K++A
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMA 114

[Close]

BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           A+ G+V+ CHT   W  QL KAK+ NKL+V++FTA+WC PCR +AP+  +LAKK  +  I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           F KVDVDEL SVA E GV A+P+F F K G++VDK VGA K+ L + + K+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-27
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           MA+ G+V+  HTV +W + L K     KL+VV+FTA+WCGPC+ +A    ELAKK    V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPT-V 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
            FLKVDVDEL SVA +  V A+P+F F K GK+VDK VGA+KD L  T+ K+++
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHIS 113

[Close]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL
Match: A0A0A0KSB1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTV SWKQQLLKAKQCNKLVVVNFTATWC PCR MAPVLE+LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
            FLKVDVDEL+SVA E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+VA
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL
Match: A0A5D3DCH1 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00270 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWC PCR MAPVL++LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           I LKVDVDEL+SVA+E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+VA
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL
Match: A0A1S3CMM6 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWC PCR MAPVL++LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           I LKVDVDEL+SVA+E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+VA
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL
Match: A0A5A7U8S0 (Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00820 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.7e-47
Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWC PCR MAPVL++LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYV 114
           I LKVDVDEL+SVA+E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL
Match: A0A6J1CDG5 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010214 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 94/114 (82.46%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           MA+MGKVVSC +VGSWKQQLLKAK+ NKLVVV FTATWCGPCR MAPVLE+LAKKTSN V
Sbjct: 1   MAEMGKVVSCRSVGSWKQQLLKAKKYNKLVVVKFTATWCGPCRAMAPVLEDLAKKTSN-V 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           IFLKVDVDEL+ VA+ELGVGA+PSFQFFKNGKLVDKFVGA KDLL +T+ K+ A
Sbjct: 61  IFLKVDVDELMRVANELGVGAIPSFQFFKNGKLVDKFVGANKDLLTNTLSKHAA 113

[Close]

BLAST of Lcy13g009270 vs. NCBI nr
Match: XP_038893273.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 5.7e-50
Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKK-TSND 60
           MADMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWCGPCRTMAPVLE+LA K  +ND
Sbjct: 1   MADMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCGPCRTMAPVLEDLASKMRNND 60

Query: 61  VIFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYV 114
           V+FLKVDVDEL+SVA+ELGVGALPSFQFFKNGKLVDKFVGARKD+LHSTV K+V
Sbjct: 61  VLFLKVDVDELMSVANELGVGALPSFQFFKNGKLVDKFVGARKDVLHSTVSKHV 114

[Close]

BLAST of Lcy13g009270 vs. NCBI nr
Match: XP_004149943.1 (thioredoxin H1 [Cucumis sativus] >KGN50606.1 hypothetical protein Csa_021443 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.4e-48
Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTV SWKQQLLKAKQCNKLVVVNFTATWC PCR MAPVLE+LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFTATWCAPCRGMAPVLEDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
            FLKVDVDEL+SVA E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+VA
Sbjct: 61  TFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of Lcy13g009270 vs. NCBI nr
Match: XP_008464900.1 (PREDICTED: thioredoxin H1-like [Cucumis melo] >TYK21273.1 thioredoxin H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWC PCR MAPVL++LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           I LKVDVDEL+SVA+E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+VA
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHVA 114

[Close]

BLAST of Lcy13g009270 vs. NCBI nr
Match: KAA0051550.1 (thioredoxin H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 7.6e-47
Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           M DMGKVVSCHTVGSWKQQLLKAKQ NKLVVVNFTATWC PCR MAPVL++LA K SN+V
Sbjct: 1   MNDMGKVVSCHTVGSWKQQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKMSNNV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYV 114
           I LKVDVDEL+SVA+E GVGALPSFQFFKNGKLVDKFVGARKD+LH TV K+V
Sbjct: 61  IVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKHV 113

[Close]

BLAST of Lcy13g009270 vs. NCBI nr
Match: XP_038893093.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 4.2e-45
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           MA+MGKV+SCHTV SW QQLLKAKQCNKLVVVNFTATWCGPCR MAP++EEL+KK SN V
Sbjct: 1   MAEMGKVISCHTVSSWNQQLLKAKQCNKLVVVNFTATWCGPCRAMAPIVEELSKKMSN-V 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           IFLKVD+DEL+S+A ELGV ++PSFQF KNGK+VDKFVGA+KDLL STV K+ A
Sbjct: 61  IFLKVDIDELMSIAKELGVSSIPSFQFIKNGKVVDKFVGAKKDLLKSTVAKHAA 113

[Close]

BLAST of Lcy13g009270 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 134.8 bits (338), Expect = 4.3e-32
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           ++ G+V++CHTV +W +QL KA +   LVVV+FTA+WCGPCR +AP   +LAKK  N V+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN-VL 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKYVA 115
           FLKVD DEL SVA +  + A+P+F F K GK++DK VGA+KD L ST+ K++A
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Lcy13g009270 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-31
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 2   ADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVI 61
           A+ G+V+ CHT   W  QL KAK+ NKL+V++FTA+WC PCR +AP+  +LAKK  +  I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           F KVDVDEL SVA E GV A+P+F F K G++VDK VGA K+ L + + K+
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Lcy13g009270 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 120.6 bits (301), Expect = 8.5e-28
Identity = 53/112 (47.32%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           MA  G+V++CHT+  W +++  A +  KL+V++FTA+WC PCR +APV  E+AKK +N V
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTN-V 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           +F K+DVDEL +VA E  V A+P+F F K G ++D+ VGA KD ++  + K+
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Lcy13g009270 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26
Identity = 55/112 (49.11%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MADMGKVVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDV 60
           MA  G+V++CHTV  W ++L  A +  KL+V++FTATWC PCR +APV  +LAKK   DV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKK-HLDV 60

Query: 61  IFLKVDVDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           +F KVDVDEL +VA+E  V A+P+F F K G++ +  VGA K+ + + + K+
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]

BLAST of Lcy13g009270 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 7   VVSCHTVGSWKQQLLKAKQCNKLVVVNFTATWCGPCRTMAPVLEELAKKTSNDVIFLKVD 66
           +V    +  WK +L   K  NKL+V+ FTA WCGPC+T+ P LEELA K + DV F+K+D
Sbjct: 39  IVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYT-DVEFVKID 98

Query: 67  VDELVSVADELGVGALPSFQFFKNGKLVDKFVGARKDLLHSTVFKY 113
           VD L+SV  E  +  LP+  F K G+ VD  VG + D L   + KY
Sbjct: 99  VDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKY 143

The following BLAST results are available for this feature:

BLAST of Lcy13g009270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29448	6.1e-31	54.87	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q39362	1.4e-30	54.95	Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1	[more]
Q43636	2.3e-30	55.75	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q39239	1.2e-29	54.05	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
Q07090	1.4e-27	52.63	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]

BLAST of Lcy13g009270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSB1	1.1e-48	85.96	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500...	[more]
A0A5D3DCH1	9.7e-48	85.09	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G...	[more]
A0A1S3CMM6	9.7e-48	85.09	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103502660 PE=4 SV=1	[more]
A0A5A7U8S0	3.7e-47	84.96	Thioredoxin H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G...	[more]
A0A6J1CDG5	4.5e-45	82.46	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010214 PE=4 SV=1	[more]

BLAST of Lcy13g009270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893273.1	5.7e-50	89.47	thioredoxin H1-like [Benincasa hispida]	[more]
XP_004149943.1	2.4e-48	85.96	thioredoxin H1 [Cucumis sativus] >KGN50606.1 hypothetical protein Csa_021443 [Cu...	[more]
XP_008464900.1	2.0e-47	85.09	PREDICTED: thioredoxin H1-like [Cucumis melo] >TYK21273.1 thioredoxin H1-like [C...	[more]
KAA0051550.1	7.6e-47	84.96	thioredoxin H1-like [Cucumis melo var. makuwa]	[more]
XP_038893093.1	4.2e-45	78.95	thioredoxin H1-like [Benincasa hispida]	[more]

BLAST of Lcy13g009270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	4.3e-32	54.87	thioredoxin H-type 1	[more]
AT1G19730.1	8.2e-31	54.05	Thioredoxin superfamily protein	[more]
AT1G45145.1	8.5e-28	47.32	thioredoxin H-type 5	[more]
AT5G42980.1	2.7e-26	49.11	thioredoxin 3	[more]
AT1G69880.1	3.4e-21	46.23	thioredoxin H-type 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 78..89 score: 35.09 coord: 38..47 score: 62.72 coord: 30..38 score: 53.52
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..114 e-value: 5.0E-36 score: 125.3
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 18..102 e-value: 1.62161E-32 score: 107.644
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 9..107 e-value: 2.7E-28 score: 98.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..114 score: 12.61434
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g009270.1	Lcy13g009270.1	mRNA