Lcy13g009260 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g009260
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Thioredoxin
Location	Chr13: 9375203 .. 9376331 (-)
RNA-Seq Expression	Lcy13g009260
Synteny	Lcy13g009260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCCTTAATTCAAAGCCCTTTTTTAGCTCATTCTCTTTGCTTGTTTCTCTGAAAAAAATATCAAAATGGCAGAAATGGGGAAAGTGATATCATGTCACACTGTCGCCTCTTGGAGACAACAACTCCTCAAAGCCAAACAATCCAACAAACTGGTACTTTTATATATATCTTACCTCCTCAATTTTTCTTTCTTCCTTCTCGAACTATTTCTAGCGTTTTTCAGCATATATCGCTTTTATGTTATGATATTATCGATAGGAAAAACAAAACCTTCTCATATTAATCTTCCCTATCTTTTTTACTCATGTTCGTATTGTTGATGATCCCACATTGAAAAGATAAGTGGAGACCTCACAATTTATAAGATAGATAGGTTACTCCACTCATTGTCAATTGGTTTTGAGATGAAACCTCATGTTATCAAATACCATAATCAAATTAACTTTATTTTTGTGGCTGATTCAGGTTGTTGTGAATTTTACTGTAACAACATTTTGCGGCCCATGTCGCGCCATGGCTCCCGTTGTTGAAGAATTAGCAAAGAAAATGAATAATGTCATATTCTTGAAAGTGGACATCCATGAACTCATGGTAAGTTAAACTCAGTCTGCCCACCATCGAAGCTCTTATTTGTCTATGATGTTTTACAAATCTTTTTCTCTCAAAGTAAAGTATCAATTTTTTCAATATTTATTTATTTTTCTCTTCTTCAGAGTGTTGCGATGGAGTTTGGAGTGGGTACCACTCCTTCATTTCAATTCTTCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGTGCAAACAAAGATTTATTGCAAACCACTATCTCCAAACATGCCACATGAACAAGTTGCTCTATAAAGGATTGCTTGAGCTTTAATCAACAATAATACTAAAGTTGTAAATTAGGGTCTATTTGAAATGACTTTTCAAGTGTTTAAAAACATTTAAAAAGTCATTTCAAACAGGTCTCTAGTTTAGATAGGAACTCAATCCAACTATATACAAATGTCGGAACAGTTTTAGTTTGCATTACTTGAAAAAGTTGTAAGAAAAGTGTGTGAAATAATTGTACTTTAAATGTCGTATTTATTACTTTAGATAATATAATGTTTGCCATTTTGGA

mRNA sequence

TTCCTCCTTAATTCAAAGCCCTTTTTTAGCTCATTCTCTTTGCTTGTTTCTCTGAAAAAAATATCAAAATGGCAGAAATGGGGAAAGTGATATCATGTCACACTGTCGCCTCTTGGAGACAACAACTCCTCAAAGCCAAACAATCCAACAAACTGGTTGTTGTGAATTTTACTGTAACAACATTTTGCGGCCCATGTCGCGCCATGGCTCCCGTTGTTGAAGAATTAGCAAAGAAAATGAATAATGTCATATTCTTGAAAGTGGACATCCATGAACTCATGAGTGTTGCGATGGAGTTTGGAGTGGGTACCACTCCTTCATTTCAATTCTTCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGTGCAAACAAAGATTTATTGCAAACCACTATCTCCAAACATGCCACATGAACAAGTTGCTCTATAAAGGATTGCTTGAGCTTTAATCAACAATAATACTAAAGTTGTAAATTAGGGTCTATTTGAAATGACTTTTCAAGTGTTTAAAAACATTTAAAAAGTCATTTCAAACAGGTCTCTAGTTTAGATAGGAACTCAATCCAACTATATACAAATGTCGGAACAGTTTTAGTTTGCATTACTTGAAAAAGTTGTAAGAAAAGTGTGTGAAATAATTGTACTTTAAATGTCGTATTTATTACTTTAGATAATATAATGTTTGCCATTTTGGA

Coding sequence (CDS)

ATGGCAGAAATGGGGAAAGTGATATCATGTCACACTGTCGCCTCTTGGAGACAACAACTCCTCAAAGCCAAACAATCCAACAAACTGGTTGTTGTGAATTTTACTGTAACAACATTTTGCGGCCCATGTCGCGCCATGGCTCCCGTTGTTGAAGAATTAGCAAAGAAAATGAATAATGTCATATTCTTGAAAGTGGACATCCATGAACTCATGAGTGTTGCGATGGAGTTTGGAGTGGGTACCACTCCTTCATTTCAATTCTTCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGTGCAAACAAAGATTTATTGCAAACCACTATCTCCAAACATGCCACATGA

Protein sequence

MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHAT

Homology

[Close]

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-29
Identity = 62/111 (55.86%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVI 61
           +E G+VI+CHTV +W +QL KA +S  LVVV+FT  ++CGPCR +AP   +LAKK+ NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLPNVL 62

Query: 62  FLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           FLKVD  EL SVA ++ +   P+F F K GK++DK VGA KD LQ+TI+KH
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-29
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVI 61
           AE G+VI CHTV +W +QL K   +  L+VV+FT  ++CGPCR +AP + ELAKK+ NV 
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFT-ASWCGPCRFIAPFLAELAKKLPNVT 62

Query: 62  FLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           FLKVD+ EL +VA E+ V + P+F F K GK++DK VGA KD LQ TI+KH
Sbjct: 63  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-28
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKK-MNNV 61
           AE G+VI CHT   W  QL KAK+SNKL+V++FT  ++C PCR +AP+  +LAKK M++ 
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFT-ASWCPPCRMIAPIFNDLAKKFMSSA 62

Query: 62  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           IF KVD+ EL SVA EFGV   P+F F K G++VDK VGANK+ LQ  I KH
Sbjct: 63  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-26
Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKK-MNNV 61
           AE G+VI CH +  W  QL  AKQSNKL+V++FT  ++C PCR +APV  +LAKK M++ 
Sbjct: 3   AEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFT-ASWCPPCRMIAPVFADLAKKFMSSA 62

Query: 62  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           IF KVD+ EL +VA EFGV   P+F   K+G +VDK VGA K+ L  TI+KH
Sbjct: 63  IFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113

[Close]

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-26
Identity = 61/112 (54.46%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MAE G+VI  HTV +W + L K     KL+VV+FT  ++CGPC+ +A    ELAKKM  V
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFT-ASWCGPCKFIASFYAELAKKMPTV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
            FLKVD+ EL SVA ++ V   P+F F K GK+VDK VGA KD LQ TI+KH
Sbjct: 61  TFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL
Match: A0A1S3CMJ1 (thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.0e-42
Identity = 90/114 (78.95%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           MAEMGKVISCHTV+SW+Q LLKA+Q NKLVVVNFT  ++CGPCR MAP++EELAKKM NN
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFT-ASWCGPCRFMAPILEELAKKMSNN 60

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VIFLKVDI ELMS+A EFGV + PSFQF KNGKLVDKFVGA K+LLQ+TISKH+
Sbjct: 61  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 113

[Close]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL
Match: A0A0A0KLS7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           MAEMGKVISCHTV+SW+Q LLKA+Q NKLVVVNFT  ++CGPCR MAP++EELAKKM NN
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFT-ASWCGPCRFMAPILEELAKKMSNN 60

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VIFLKVDI ELMS+A EFGV + PSFQF KNGKLVDKFVGA K LLQ TISKH+
Sbjct: 61  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 113

[Close]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL
Match: A0A6J1CDG5 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010214 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.8e-41
Identity = 88/113 (77.88%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MAEMGKV+SC +V SW+QQLLKAK+ NKLVVV FT  T+CGPCRAMAPV+E+LAKK +NV
Sbjct: 1   MAEMGKVVSCRSVGSWKQQLLKAKKYNKLVVVKFT-ATWCGPCRAMAPVLEDLAKKTSNV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           IFLKVD+ ELM VA E GVG  PSFQFFKNGKLVDKFVGANKDLL  T+SKHA
Sbjct: 61  IFLKVDVDELMRVANELGVGAIPSFQFFKNGKLVDKFVGANKDLLTNTLSKHA 112

[Close]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL
Match: A0A0A0KSB1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.4e-40
Identity = 86/113 (76.11%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           M +MGKV+SCHTV SW+QQLLKAKQ NKLVVVNFT  T+C PCR MAPV+E+LA KM NN
Sbjct: 1   MNDMGKVVSCHTVRSWKQQLLKAKQCNKLVVVNFT-ATWCAPCRGMAPVLEDLANKMSNN 60

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           V FLKVD+ ELMSVA E+GVG  PSFQFFKNGKLVDKFVGA KD+L  T+SKH
Sbjct: 61  VTFLKVDVDELMSVASEYGVGALPSFQFFKNGKLVDKFVGARKDVLHKTVSKH 112

[Close]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL
Match: A0A6J1CBX5 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010155 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.4e-40
Identity = 85/109 (77.98%), Postives = 96/109 (88.07%), Query Frame = 0


Query: 5   GKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVIFLK 64
           G+V+SC +V SW+QQLLKAKQ NKLVVV FT  T+CGPCRAMAPV+E+LAKK +NVIFLK
Sbjct: 40  GEVVSCRSVGSWKQQLLKAKQYNKLVVVKFT-ATWCGPCRAMAPVLEDLAKKTSNVIFLK 99

Query: 65  VDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VD+ ELMSVA E GVG  PSFQFFKNGKLVDKFVGANKDLL+ T+SKHA
Sbjct: 100 VDVDELMSVANELGVGAIPSFQFFKNGKLVDKFVGANKDLLRNTLSKHA 147

[Close]

BLAST of Lcy13g009260 vs. NCBI nr
Match: XP_038893093.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MAEMGKVISCHTV+SW QQLLKAKQ NKLVVVNFT  T+CGPCRAMAP+VEEL+KKM+NV
Sbjct: 1   MAEMGKVISCHTVSSWNQQLLKAKQCNKLVVVNFT-ATWCGPCRAMAPIVEELSKKMSNV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           IFLKVDI ELMS+A E GV + PSFQF KNGK+VDKFVGA KDLL++T++KHA
Sbjct: 61  IFLKVDIDELMSIAKELGVSSIPSFQFIKNGKVVDKFVGAKKDLLKSTVAKHA 112

[Close]

BLAST of Lcy13g009260 vs. NCBI nr
Match: XP_008464899.1 (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 90/114 (78.95%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           MAEMGKVISCHTV+SW+Q LLKA+Q NKLVVVNFT  ++CGPCR MAP++EELAKKM NN
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQYNKLVVVNFT-ASWCGPCRFMAPILEELAKKMSNN 60

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VIFLKVDI ELMS+A EFGV + PSFQF KNGKLVDKFVGA K+LLQ+TISKH+
Sbjct: 61  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 113

[Close]

BLAST of Lcy13g009260 vs. NCBI nr
Match: XP_004149944.1 (thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-41
Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           MAEMGKVISCHTV+SW+Q LLKA+Q NKLVVVNFT  ++CGPCR MAP++EELAKKM NN
Sbjct: 1   MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFT-ASWCGPCRFMAPILEELAKKMSNN 60

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VIFLKVDI ELMS+A EFGV + PSFQF KNGKLVDKFVGA K LLQ TISKH+
Sbjct: 61  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 113

[Close]

BLAST of Lcy13g009260 vs. NCBI nr
Match: KAE8648009.1 (hypothetical protein Csa_021401 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-41
Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKM-NN 60
           MAEMGKVISCHTV+SW+Q LLKA+Q NKLVVVNFT  ++CGPCR MAP++EELAKKM NN
Sbjct: 28  MAEMGKVISCHTVSSWKQHLLKAEQCNKLVVVNFT-ASWCGPCRFMAPILEELAKKMSNN 87

Query: 61  VIFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           VIFLKVDI ELMS+A EFGV + PSFQF KNGKLVDKFVGA K LLQ TISKH+
Sbjct: 88  VIFLKVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKTLLQNTISKHS 140

[Close]

BLAST of Lcy13g009260 vs. NCBI nr
Match: XP_022139257.1 (thioredoxin H1-like [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 3.7e-41
Identity = 88/113 (77.88%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MAEMGKV+SC +V SW+QQLLKAK+ NKLVVV FT  T+CGPCRAMAPV+E+LAKK +NV
Sbjct: 1   MAEMGKVVSCRSVGSWKQQLLKAKKYNKLVVVKFT-ATWCGPCRAMAPVLEDLAKKTSNV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHA 114
           IFLKVD+ ELM VA E GVG  PSFQFFKNGKLVDKFVGANKDLL  T+SKHA
Sbjct: 61  IFLKVDVDELMRVANELGVGAIPSFQFFKNGKLVDKFVGANKDLLTNTLSKHA 112

[Close]

BLAST of Lcy13g009260 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-30
Identity = 62/111 (55.86%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVI 61
           +E G+VI+CHTV +W +QL KA +S  LVVV+FT  ++CGPCR +AP   +LAKK+ NV+
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLPNVL 62

Query: 62  FLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           FLKVD  EL SVA ++ +   P+F F K GK++DK VGA KD LQ+TI+KH
Sbjct: 63  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Lcy13g009260 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 5.9e-29
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKK-MNNV 61
           AE G+VI CHT   W  QL KAK+SNKL+V++FT  ++C PCR +AP+  +LAKK M++ 
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFT-ASWCPPCRMIAPIFNDLAKKFMSSA 62

Query: 62  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           IF KVD+ EL SVA EFGV   P+F F K G++VDK VGANK+ LQ  I KH
Sbjct: 63  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Lcy13g009260 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 114.4 bits (285), Expect = 6.1e-26
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MA  G+VI+CHT+  W +++  A +S KL+V++FT  ++C PCR +APV  E+AKK  NV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFT-ASWCPPCRFIAPVFAEMAKKFTNV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKH 113
           +F K+D+ EL +VA EF V   P+F F K G ++D+ VGA KD +   + KH
Sbjct: 61  VFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Lcy13g009260 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 109.0 bits (271), Expect = 2.5e-24
Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 1   MAEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNV 60
           MA  G+VI+CHTV  W ++L  A +S KL+V++FT  T+C PCR +APV  +LAKK  +V
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFT-ATWCPPCRFIAPVFADLAKKHLDV 60

Query: 61  IFLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISKHAT 115
           +F KVD+ EL +VA EF V   P+F F K G++ +  VGA K+ +   + KH T
Sbjct: 61  VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]

BLAST of Lcy13g009260 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19
Identity = 44/110 (40.00%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 2   AEMGKVISCHTVASWRQQLLKAKQSNKLVVVNFTVTTFCGPCRAMAPVVEELAKKMNNVI 61
           +E  +V+   + A W+    + K+SNKL+VV+F+  ++CGPCR + P +  +A K N+V 
Sbjct: 22  SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFS-ASWCGPCRMIEPAIHAMADKFNDVD 81

Query: 62  FLKVDIHELMSVAMEFGVGTTPSFQFFKNGKLVDKFVGANKDLLQTTISK 112
           F+K+D+ EL  VA EF V   P+F   K GK +++ +GA KD L+  +SK
Sbjct: 82  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Lcy13g009260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29448	2.0e-29	55.86	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q43636	5.7e-29	55.86	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q39239	8.3e-28	57.14	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
Q39362	2.0e-26	54.46	Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1	[more]
Q07090	2.0e-26	54.46	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]

BLAST of Lcy13g009260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMJ1	8.0e-42	78.95	thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1	[more]
A0A0A0KLS7	1.4e-41	78.95	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190490...	[more]
A0A6J1CDG5	1.8e-41	77.88	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010214 PE=4 SV=1	[more]
A0A0A0KSB1	4.4e-40	76.11	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190500...	[more]
A0A6J1CBX5	4.4e-40	77.98	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111010155 PE=4 SV=1	[more]

BLAST of Lcy13g009260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893093.1	3.0e-43	79.65	thioredoxin H1-like [Benincasa hispida]	[more]
XP_008464899.1	1.6e-41	78.95	PREDICTED: thioredoxin H-type-like [Cucumis melo]	[more]
XP_004149944.1	2.8e-41	78.95	thioredoxin H-type [Cucumis sativus]	[more]
KAE8648009.1	2.8e-41	78.95	hypothetical protein Csa_021401 [Cucumis sativus]	[more]
XP_022139257.1	3.7e-41	77.88	thioredoxin H1-like [Momordica charantia]	[more]

BLAST of Lcy13g009260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	1.4e-30	55.86	thioredoxin H-type 1	[more]
AT1G19730.1	5.9e-29	57.14	Thioredoxin superfamily protein	[more]
AT1G45145.1	6.1e-26	46.43	thioredoxin H-type 5	[more]
AT5G42980.1	2.5e-24	47.37	thioredoxin 3	[more]
AT5G39950.1	1.4e-19	40.00	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 10..110 e-value: 4.9E-24 score: 84.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..114 score: 11.323732
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..114 e-value: 1.7E-33 score: 117.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..113
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..113
None	No IPR available	CDD	cd02947	TRX_family	coord: 18..102 e-value: 5.64447E-32 score: 106.103
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g009260.1	Lcy13g009260.1	mRNA