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Lcy13g009220 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGTGCTTTTCATTTAAAGAATAGAAAGAAAATGTGGTTACCGACTATTCTTGAGGGAACTCTCTTGAATAGGATAAAATATCCTTTCCTAAATAATTCTCCCGGATTTGTACCACAGTATCTTTGTTCAGTTATCATTCTCGCCATTGAAACTCAGAATCTAATCCCTGAATCTGAATCCCTTCATGTTCATCCACTCACAAATCGCCACCCAATATGGCACAACTTTCTCGATCACAAAACACCTAGATACTCAAAACAATAATTCATAGCAGATGGAAAATTCCTCCACAAACCCATATATTCCACTTCCCAATTCTCAGAATATTTGCTTCCACAGATATTAGAAAGAGATGCAATGGGGAGTGTATTTGATTAAATGGAATCCTTCAAGTTGTGGCTCAACCCCCTTATCCAACGAGACCACCGCAACCCTTTTTCTTTCAAGGATCAATAAGGCACAGTTCGTGAGGACAGGGGAAAAAGAGGGGATTTTGTGAACCCACAGGATGGATTTGGATGGGACAATGAAACATGCACATCAGACAGAAAAAACACAGGTCAAAGAGATTGTTATGGGACATGTGGCGGATTGAATTTAGGGATTTGCAGAAGGACCACTTGGAACCATGTTAGAATTGAATGTGGGCACATGGAGCTGAAGAATCATCGATTTGTACTGTCTTTTTTGGGGCTTATAAATGGGATTGAACTGTTTCAGGTCTTGTGTGTCTGAAATCTTCACGTGGGTCTGCTTAATCTCTTTCTGTTTTTTGATGCATATTATCTGTTTGTTATTTTGTCTGAGTGGAAAACCTTATCGAGTTCCCTGTTTTTTTGCTTTTTGTGTATATGGGTGTGGGCCGTTAAGAGATAACTATCAGGTTTAGGGAGTCGTTTTGTTCGTTGGCTGACAGAGAAAGCTCTAAGTGTTAGTACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCTACTACTGGATATTTTGGCTCTATTTTCCCACCACTGGTTTGTACCTTAACTTCAATTACTAGTTTATGTTTTTGTTTTTTTTTTCTTTAATCTCTCTCTTTAGATGTGGATTTCCTGAACTGGGTCACTTTCAGTATTTGCTTGTTGATTTTGCATGTCTCAAGTTGATGATATGACAGGTTAAAAAATAGGCTGAACAGGAATAAGAAAGCTTATTAGCTTGGGAATTCAAGTAATGGAAGTTTAGTTTCTTCCTAATGGAGATAAAAAGTACTTGTTAAAGGATTTCAAAAGTGGTCCTGCTCTGCTCTGTTCTGTATGAAAAATTTCATGGGATTTATAAAGCATTTTTTGAACTTTTCTTCTCCGGTTTTAGGTGGTGGAGAGAGAGAGAAAACAGGATGTTGGAAATCAAGTTTCCACTGGCAAAGTTGAGATTTCAGGTTCTTTCACCTTCTAAAACTTGAATTTACACATCTCCCTCACAAAGGATAAGAAACCTATGTCACCTAAGTAATCTCTCATGATTTCCACTATTGAATATCTTTTCAAAAATGATATTAACTCCATTTATGTAAAACTGGCTTTTGTTCCTCTCAGATAATGCCTGTATAAATGGCAAGAACGGAGCTGGTGGTGCAACTGGGAAAGATGCAAGCTCCATGTATGAGAATGAATGTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTATGGTGGTCAAGAAAATTTCTCCCCAAGAACTAAGGCCTCAGAATCCCACCACCATAATGTAAGCATTTCAAAATAAAAATAATCATATGCCATATTCTTTGTAGTTTTCTCTAGTGTTTGGGTGAAACTGAAAGGCTTTTTGTTGGGATCTTAATGGACATATGAAAAGAGATTTGATAGTGTTGTGTTGATTACTTGATTGATCTGATACACACTGATGTTATGGAATCAACATTTTATCAGTTTAAGAAAGAAGGGAAAGACAATGATGTAAACGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTATGACAACTTCCATGAATTTACTGTTAGACAAAGAAGAGATGATGGTTTTAACAAATTCTTTTAACTTAGCCCTTTGTCTTTTCAGGTTCTCTTTATTACTAACACTTCCATCATATGGGATTTCCCACCTATAGGTAATACCGAACTATTCTCTCGGTTACTCGTCGGTGAAACTCGCTTATCTCGTGTTTTTCATGAACGTTTTCTTCCATTTTGATATGTTTCAGATTATTATCTGGATTTGGTAAACCTGAAGATATGAGCTCTTTCCATAGCCTATCATCCAGTTGACTGACATTCAGTTATTTGATTATGTTTCAGGATTTGGTGACAGTATAATCTATACTATATTATCATTTACAATTGAAGCTACCATAGCAATAAAGAAGTAGAGTTTGAAGGGGCCTACAAGGCTTTGGTCAAAGAATGAAAGCTTGTGTGGATCATTTTGTTCCATATTAGTCAATTTTGACAGTTGTGTGTTTCAAAGCTGAAGAGTGTTGATGTAGTTTTCTTCTGCAAGTGGAACTCTTTCAATATCTCCAACTTAATCTATCCTCTTATTATCTGATATTTTAATAACCATGTTCACAGAGTATATGATGAGTCTAGTATATTTTGTGCATTCAAAAGTTAAAACATCTACTTTGTCCTATTGTCCATGCTGCTCCTGGTCGTAATTGGATGTTGTTGGATAAAATCCATGAACGTAAGGGGAGCGCTCGAGAGAGCAGGAAGAAGAAAACTATGCCAGCCATGTGTATTGGCTTTACATGGAGAACAAGGAGAACTAGAAAATGGAAATGGTTCATCAAAGTTGAAAGAGAGCTGGACTAAGAACAACCAAATGAGCAGCCACTGCTAGAGTACTTAAACCACATAACGGTACAAGATTCGATAATGCACGACGAGTTTTTTCGAGGATAGAGAAGATGATAACACCTCCACAGAGGTAACCAAAGTGGTGATCCTCAATGTAACACCGCTCTGGTATCGTTCCTGCAAGTTCTGCTTGACAGTATCAGAAAGAACTGCACAAAGGCAAGTCATGTTTTGAACCATTTCAGCAGCCAATGCACAACATTCATCTGAGACCCGAACAATATTCAAAATTCTTTGCTGCAGGAGACCACGATTCGAGCCTCCACCGCTGCTTCCCGAGTGTCGTGATGTTCCCTCACTCGCCTTCCCCCTATGCTCTGAACAAAAGCAATGGCCACAATGAAAAAAGATGGCTAGAGAACTGCTGAACTTGTGTGAGAAACTTCCATTTCTTCAATGTGATGATAAAACACATTTCTTTTAGATGGGTTTTACAGTGAAACAAGGAAACTGCCCATTGGAACTTTTTAATCAACAATATAGATTGGCCCATGTGGGGAAGGCTTGAGATATCCTTATACATAGTTGAAAAAGAAAGAACTGCATTATTATTATTTTTTCTTCTTCTTTCTAGTTGAATTTCTCACAACCTCTAGAAAGCTTTCAAATTGGAAATGGAAAAATTTTGGTTAAATTATAAGTTTAGTCATGAATT CTCGTGCTTTTCATTTAAAGAATAGAAAGAAAATGTGGTTACCGACTATTCTTGAGGGAACTCTCTTGAATAGGATAAAATATCCTTTCCTAAATAATTCTCCCGGATTTGTACCACAGTATCTTTGTTCAGTTATCATTCTCGCCATTGAAACTCAGAATCTAATCCCTGAATCTGAATCCCTTCATGTTCATCCACTCACAAATCGCCACCCAATATGGCACAACTTTCTCGATCACAAAACACCTAGATACTCAAAACAATAATTCATAGCAGATGGAAAATTCCTCCACAAACCCATATATTCCACTTCCCAATTCTCAGAATATTTGCTTCCACAGATATTAGAAAGAGATGCAATGGGGAGTGTATTTGATTAAATGGAATCCTTCAAGTTGTGGCTCAACCCCCTTATCCAACGAGACCACCGCAACCCTTTTTCTTTCAAGGATCAATAAGGCACAGTTCGTGAGGACAGGGGAAAAAGAGGGGATTTTGTGAACCCACAGGATGGATTTGGATGGGACAATGAAACATGCACATCAGACAGAAAAAACACAGGTCAAAGAGATTGTTATGGGACATGTGGCGGATTGAATTTAGGGATTTGCAGAAGGACCACTTGGAACCATGTTAGAATTGAATGTGGGCACATGGAGCTGAAGAATCATCGATTTGTACTGTCTTTTTTGGGGCTTATAAATGGGATTGAACTGTTTCAGGTCTTGTGTGTCTGAAATCTTCACAGATAACTATCAGGTTTAGGGAGTCGTTTTGTTCGTTGGCTGACAGAGAAAGCTCTAAGTGTTAGTACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCTACTACTGGATATTTTGGCTCTATTTTCCCACCACTGGTGGTGGAGAGAGAGAGAAAACAGGATGTTGGAAATCAAGTTTCCACTGGCAAAGTTGAGATTTCAGATAATGCCTGTATAAATGGCAAGAACGGAGCTGGTGGTGCAACTGGGAAAGATGCAAGCTCCATGTATGAGAATGAATGTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTATGGTGGTCAAGAAAATTTCTCCCCAAGAACTAAGGCCTCAGAATCCCACCACCATAATTTTAAGAAAGAAGGGAAAGACAATGATGTAAACGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTTCTCTTTATTACTAACACTTCCATCATATGGGATTTCCCACCTATAGGATTTGGTGACAGTATAATCTATACTATATTATCATTTACAATTGAAGCTACCATAGCAATAAAGAAGTAGAGTTTGAAGGGGCCTACAAGGCTTTGGTCAAAGAATGAAAGCTTGTGTGGATCATTTTGTTCCATATTAGTCAATTTTGACAGTTGTGTGTTTCAAAGCTGAAGAGTGTTGATGTAGTTTTCTTCTGCAAGTGGAACTCTTTCAATATCTCCAACTTAATCTATCCTCTTATTATCTGATATTTTAATAACCATGTTCACAGAGTATATGATGAGTCTAGTATATTTTGTGCATTCAAAAGTTAAAACATCTACTTTGTCCTATTGTCCATGCTGCTCCTGGTCGTAATTGGATGTTGTTGGATAAAATCCATGAACGTAAGGGGAGCGCTCGAGAGAGCAGGAAGAAGAAAACTATGCCAGCCATGTGTATTGGCTTTACATGGAGAACAAGGAGAACTAGAAAATGGAAATGGTTCATCAAAGTTGAAAGAGAGCTGGACTAAGAACAACCAAATGAGCAGCCACTGCTAGAGTACTTAAACCACATAACGGTACAAGATTCGATAATGCACGACGAGTTTTTTCGAGGATAGAGAAGATGATAACACCTCCACAGAGGTAACCAAAGTGGTGATCCTCAATGTAACACCGCTCTGGTATCGTTCCTGCAAGTTCTGCTTGACAGTATCAGAAAGAACTGCACAAAGGAGACCACGATTCGAGCCTCCACCGCTGCTTCCCGAGTGTCGTGATGTTCCCTCACTCGCCTTCCCCCTATGCTCTGAACAAAAGCAATGGCCACAATGAAAAAAGATGGCTAGAGAACTGCTGAACTTGTGTGAGAAACTTCCATTTCTTCAATGTGATGATAAAACACATTTCTTTTAGATGGGTTTTACAGTGAAACAAGGAAACTGCCCATTGGAACTTTTTAATCAACAATATAGATTGGCCCATGTGGGGAAGGCTTGAGATATCCTTATACATAGTTGAAAAAGAAAGAACTGCATTATTATTATTTTTTCTTCTTCTTTCTAGTTGAATTTCTCACAACCTCTAGAAAGCTTTCAAATTGGAAATGGAAAAATTTTGGTTAAATTATAAGTTTAGTCATGAATT ATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTTTTGGTCCCATGGACTCAAATTCAGCTTCTTCAACATCTACTACTGGATATTTTGGCTCTATTTTCCCACCACTGGTGGTGGAGAGAGAGAGAAAACAGGATGTTGGAAATCAAGTTTCCACTGGCAAAGTTGAGATTTCAGATAATGCCTGTATAAATGGCAAGAACGGAGCTGGTGGTGCAACTGGGAAAGATGCAAGCTCCATGTATGAGAATGAATGTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTATGGTGGTCAAGAAAATTTCTCCCCAAGAACTAAGGCCTCAGAATCCCACCACCATAATTTTAAGAAAGAAGGGAAAGACAATGATGTAAACGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTTCTCTTTATTACTAA MENKKQVAASSSSSLDHLFGPMDSNSASSTSTTGYFGSIFPPLVVERERKQDVGNQVSTGKVEISDNACINGKNGAGGATGKDASSMYENECMEPSYFSSSIFYGGQENFSPRTKASESHHHNFKKEGKDNDVNGSNSNSASRGNWWKGSLYY Homology
BLAST of Lcy13g009220 vs. ExPASy TrEMBL
Match: A0A6J1CC52 (uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010132 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61 Identity = 128/153 (83.66%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Lcy13g009220 vs. ExPASy TrEMBL
Match: A0A1S4E4X0 (uncharacterized protein LOC103502653 OS=Cucumis melo OX=3656 GN=LOC103502653 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.7e-59 Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Lcy13g009220 vs. ExPASy TrEMBL
Match: A0A5A7U8T9 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00020 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56 Identity = 122/150 (81.33%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of Lcy13g009220 vs. ExPASy TrEMBL
Match: A0A0A0KNZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55 Identity = 121/149 (81.21%), Postives = 129/149 (86.58%), Query Frame = 0
BLAST of Lcy13g009220 vs. ExPASy TrEMBL
Match: A0A6J1K7H1 (uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51 Identity = 117/153 (76.47%), Postives = 125/153 (81.70%), Query Frame = 0
BLAST of Lcy13g009220 vs. NCBI nr
Match: XP_022139159.1 (uncharacterized protein LOC111010132 [Momordica charantia]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 128/153 (83.66%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Lcy13g009220 vs. NCBI nr
Match: XP_038892196.1 (uncharacterized protein LOC120081420 isoform X2 [Benincasa hispida]) HSP 1 Score: 238.4 bits (607), Expect = 4.0e-59 Identity = 125/154 (81.17%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Lcy13g009220 vs. NCBI nr
Match: XP_008464894.1 (PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo] >XP_016903275.1 PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo] >XP_016903276.1 PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo] >XP_016903277.1 PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo] >XP_016903278.1 PREDICTED: uncharacterized protein LOC103502653 [Cucumis melo]) HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58 Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Lcy13g009220 vs. NCBI nr
Match: XP_011654971.1 (uncharacterized protein LOC105435461 [Cucumis sativus] >XP_011654972.1 uncharacterized protein LOC105435461 [Cucumis sativus] >XP_031740891.1 uncharacterized protein LOC105435461 [Cucumis sativus] >KGN50124.2 hypothetical protein Csa_021414 [Cucumis sativus]) HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58 Identity = 126/154 (81.82%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Lcy13g009220 vs. NCBI nr
Match: XP_038892195.1 (uncharacterized protein LOC120081420 isoform X1 [Benincasa hispida]) HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56 Identity = 121/150 (80.67%), Postives = 131/150 (87.33%), Query Frame = 0
BLAST of Lcy13g009220 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 88.6 bits (218), Expect = 4.8e-18 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of Lcy13g009220 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16 Identity = 65/157 (41.40%), Postives = 83/157 (52.87%), Query Frame = 0
BLAST of Lcy13g009220 vs. TAIR 10
Match: AT5G05965.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 7.1e-14 Identity = 66/156 (42.31%), Postives = 83/156 (53.21%), Query Frame = 0
BLAST of Lcy13g009220 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). ) HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11 Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of Lcy13g009220 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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