Lcy13g008990 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g008990
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	LOB domain-containing protein
Location	Chr13: 8892377 .. 8893680 (+)
RNA-Seq Expression	Lcy13g008990
Synteny	Lcy13g008990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACTTAAAAGCCATCATATAATTGAGACAATGACAGGGCTTAACTCTTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTATTTGCTCCTTTCTTCAGCTATGATGAAGCTACTTCCCATTTTGCTGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACACCTCCCCATGCACATCCGAAGCCACGCTGCGATTACCGTTGCCTACGAAGCCCTCGAGCGCATGCGAGATCCCACCTATGGCTGTGTCGCGCATATCTTCGCCTTGCAACAAGAGGTTGTTTCGAAACCCTAAAAACTTAAACTGATGGGTTACGGTATTCTTACCACTTGTTGCAGGAGGTGTTGTTCAAAACCCTAACAATTTAGATTGATGGGTTACAATAAGTTTATTATTATTATTTTCTTAATTCATATTCTTGATCACTTGTGAAAGTATTGAAGAAATGACTAATACAACAAGGGTTTGACCAATACATGATCCTCTGTGTTCATACCATATCCAATGACTACTACCGAATTCAAGAACTTAAGTTAATGGGTTACAACAAATTTCGTTTCTTTTTTTTATTCATATTCTCAACACTCTCCTTGTCTATCTTTCTCTCGCAGATCATAAGCTTGCAAGAGGAGATAGATATTCTGGGGAGCCAAATAGCCAACTTCACCGTTAATAGCGGCAGGCTTGCGGCGGTCGAGAATCCATTTATAGAGCTTCAAGCCTCACAGCAATTGAATGATTTTGTGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTCAGCTACCCCACCAAACTTTTGATCATGCCCAAAATGATGATCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGAAGGGTTTTTTGGGTGCAACCCAAATAATGTTGTGGAGAGATCAGCCTTTGATGTTTCACTTGAGGAGAATTTTGCTTGTTATCCATGGTAGTTTGAAGAAGAAGACAAAAGAGGAAATGAAGTTTTGTAGTAGTTGGCCTTTGGCATGGAAGAATAATATTGGCCTCTTGAAGTTGAAGAATAATTGTATTAGATTTCAATATTATCTTATCTTGTTTTGATTTTCAGAAAAAGGGTTGTAAATTTTATGTTTGAAAAGTTTTTTTCTTTTTTCCTTTTTCCTTTTAAATTCATGCAGAAAGTGGAGAGAAGTCAGAAGACTTTGATGCTTTTTAAGGCAAATGACAGGAATGACAAGTGGGTAATTTAATGACTTTTGAATGAGATATTC

mRNA sequence

GTACTTAAAAGCCATCATATAATTGAGACAATGACAGGGCTTAACTCTTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTATTTGCTCCTTTCTTCAGCTATGATGAAGCTACTTCCCATTTTGCTGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACACCTCCCCATGCACATCCGAAGCCACGCTGCGATTACCGTTGCCTACGAAGCCCTCGAGCGCATGCGAGATCCCACCTATGGCTGTGTCGCGCATATCTTCGCCTTGCAACAAGAGATCATAAGCTTGCAAGAGGAGATAGATATTCTGGGGAGCCAAATAGCCAACTTCACCGTTAATAGCGGCAGGCTTGCGGCGGTCGAGAATCCATTTATAGAGCTTCAAGCCTCACAGCAATTGAATGATTTTGTGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTCAGCTACCCCACCAAACTTTTGATCATGCCCAAAATGATGATCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGAAGGGTTTTTTGGGTGCAACCCAAATAATGTTGTGGAGAGATCAGCCTTTGATGTTTCACTTGAGGAGAATTTTGCTTGTTATCCATGGTAGTTTGAAGAAGAAGACAAAAGAGGAAATGAAGTTTTGTAGTAGTTGGCCTTTGGCATGGAAGAATAATATTGGCCTCTTGAAGTTGAAGAATAATTGTATTAGATTTCAATATTATCTTATCTTGTTTTGATTTTCAGAAAAAGGGTTGTAAATTTTATGTTTGAAAAGTTTTTTTCTTTTTTCCTTTTTCCTTTTAAATTCATGCAGAAAGTGGAGAGAAGTCAGAAGACTTTGATGCTTTTTAAGGCAAATGACAGGAATGACAAGTGGGTAATTTAATGACTTTTGAATGAGATATTC

Coding sequence (CDS)

ATGACAGGGCTTAACTCTTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTATTTGCTCCTTTCTTCAGCTATGATGAAGCTACTTCCCATTTTGCTGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACACCTCCCCATGCACATCCGAAGCCACGCTGCGATTACCGTTGCCTACGAAGCCCTCGAGCGCATGCGAGATCCCACCTATGGCTGTGTCGCGCATATCTTCGCCTTGCAACAAGAGATCATAAGCTTGCAAGAGGAGATAGATATTCTGGGGAGCCAAATAGCCAACTTCACCGTTAATAGCGGCAGGCTTGCGGCGGTCGAGAATCCATTTATAGAGCTTCAAGCCTCACAGCAATTGAATGATTTTGTGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTCAGCTACCCCACCAAACTTTTGATCATGCCCAAAATGATGATCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGAAGGGTTTTTTGGGTGCAACCCAAATAATGTTGTGGAGAGATCAGCCTTTGATGTTTCACTTGAGGAGAATTTTGCTTGTTATCCATGGTAG

Protein sequence

MTGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQNDDQMISPLFCLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW

Homology

[Close]

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot
Match: Q9LHS8 (LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-42
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 8   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHIR 67
           +S  SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 68  SHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVNSGRLAAV 127
           + AAIT++YEAL RMRDP YGCVAHIFAL Q++++LQEEI+ LGSQ+ NF+ ++   + +
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 128 ENPFIELQASQQLNDFVMNTNDYQNE 154
            N        + +N   M T ++ +E
Sbjct: 122 NN------IPEFVNQMTMATTNFVDE 141

[Close]

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.9e-36
Identity = 72/111 (64.86%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 5   NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPM 64
           +SSSSS S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP+
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 65  HIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIA 116
             R  AAIT++YEA  R++DP YGCV+HIFALQQ++++LQ E++IL  Q A
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAA 113

[Close]

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-34
Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 3   GLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHL 62
           G +S       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 63  PMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIAN 117
           P+H RS A +T+ YEA  R+RDP YGCVAHIFALQQ++++LQ E+  L + +A+
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.3e-33
Identity = 76/163 (46.63%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 8   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHIR 67
           + S S CGACKFLRR+C   CVFAP+F +++  SHFAA+H+VFGASN SKLL HLPM  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 68  SHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVNSGRLAAV 127
             AA T+ YEA  R +DP YGCV+HIF+LQQ++++LQ +++IL  Q          + A+
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQ------SMMAI 121

Query: 128 ENPFIE------------LQASQQLNDFVMNTNDYQNELLSQL 159
           ++P IE            LQ S  L+   + T++ Q E  S L
Sbjct: 122 DSPSIENPNYYQDTKPQYLQESHDLHHHHLTTSNCQTEQNSDL 158

[Close]

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32
Identity = 64/114 (56.14%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   TGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 61
           +G  +++ + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 62  LPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIA 116
           +P+H R  A +T+AYEA  R+ DP YGCV+HIFALQQ++  LQ ++  + +QIA
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL
Match: A0A6J1K6X9 (LOB domain-containing protein 33-like OS=Cucurbita maxima OX=3661 GN=LOC111491723 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.0e-92
Identity = 177/217 (81.57%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MTGL----NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVS 60
           MTGL    +SSSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVS
Sbjct: 1   MTGLTSSSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVS 60

Query: 61  KLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIAN 120
           KLLLHLPMH+RSHAAITV+YEALERMRDPTYGCVAHIF LQQEI+SLQEEID+LGSQIAN
Sbjct: 61  KLLLHLPMHVRSHAAITVSYEALERMRDPTYGCVAHIFTLQQEIMSLQEEIDMLGSQIAN 120

Query: 121 FTVNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMISP 180
           FT +   +A VENP +ELQ S+QLN+ VMNTNDYQNELLSQLP  TFD  Q ND QMISP
Sbjct: 121 FTTDMDNVAVVENPSMELQVSKQLNELVMNTNDYQNELLSQLP--TFDEVQINDAQMISP 180

Query: 181 LFCLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           LFC+GEEEGFFGCNPNN +E SAFDVS++ENFA Y W
Sbjct: 181 LFCIGEEEGFFGCNPNNAMENSAFDVSVDENFA-YLW 214

[Close]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL
Match: A0A6J1FLU4 (LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446983 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 1   MTGLN--SSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKL 60
           MTGL   SSSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKL
Sbjct: 1   MTGLTSYSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKL 60

Query: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFT 120
           LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEI+SLQEEID+LGSQIANFT
Sbjct: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIANFT 120

Query: 121 VNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMISPLF 180
            +   +A VENP IELQ S+QLND VMNTNDYQNELLSQLP+  FD  + ND QMISPLF
Sbjct: 121 ADMDNVAVVENPCIELQVSKQLNDLVMNTNDYQNELLSQLPN--FDQVEINDAQMISPLF 180

Query: 181 CLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           C+GEE+GFFGCNPNN +E SAFDV+++E F  Y W
Sbjct: 181 CIGEEDGFFGCNPNNAMENSAFDVAVDETFG-YLW 212

[Close]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL
Match: A0A6J1CDB4 (LOB domain-containing protein 33 OS=Momordica charantia OX=3673 GN=LOC111010160 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.8e-88
Identity = 169/213 (79.34%), Postives = 180/213 (84.51%), Query Frame = 0


Query: 1   MTGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTG   SSSS SSCGACKFLRRKCSDQCVFAPFFSY+EATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGFAYSSSSFSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVN 120
           HLP+H RSHAAITVAYEALERMRDPTYGC+AHIFALQQE+ SLQEEI+ILGSQIANFT  
Sbjct: 61  HLPVHNRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVASLQEEIEILGSQIANFTTA 120

Query: 121 SGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDH-AQNDDQMISPLFCL 180
           +  +A  ENPFIELQ SQQL+DFVMNT+DYQN L SQLPHQTFDH  QND QMISPL CL
Sbjct: 121 TDTVATTENPFIELQVSQQLSDFVMNTDDYQNHLFSQLPHQTFDHRGQNDAQMISPLCCL 180

Query: 181 GEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           GEE G+FGCNPN +           ENFA YPW
Sbjct: 181 GEENGYFGCNPNAM-----------ENFASYPW 202

[Close]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL
Match: A0A0A0KNX8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.2e-87
Identity = 172/218 (78.90%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MTGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLN SS+SS+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLN-SSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVN 120
           HLP HIRSHAAITVAYEALERMRDPTYGCVAHIFALQQE+ SLQEEI+ILGSQIANF   
Sbjct: 61  HLPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATT 120

Query: 121 SGRLAAVENPFI-ELQASQQLNDF-VMNTNDYQNELLSQLPHQTFDHAQNDD---QMISP 180
            G +AAV+NPFI ++Q  QQ++ F +MNTN YQNEL+S+LP+Q+FD+ QND+   QMISP
Sbjct: 121 GGSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISP 180

Query: 181 LFCLGEEEGFFG-CNPNNVVERSAFDVSLEENFACYPW 213
           LFCLGEE+G F   N NNVVE SAFDVS+EEN   YPW
Sbjct: 181 LFCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPW 217

[Close]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL
Match: A0A1S3CGM1 (LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 172/219 (78.54%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 1   MTGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLN SS++SSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLN-SSTTSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVN 120
           HLP H RSHAAITVAYEALERMRDPTYGC+AHIFALQQE++SLQEEI+ILGSQIAN    
Sbjct: 61  HLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATT 120

Query: 121 SGRLAAVENPFIE--LQASQQLNDFVM-NTNDYQNELLSQLPHQTFDHAQNDD--QMISP 180
            G +AAVENPFI+  +Q SQQ++ F M NTN YQNEL S+LP+Q+FD+ QND+  QMISP
Sbjct: 121 GGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQNDNTAQMISP 180

Query: 181 LFCLGEEEGFFG-CNPNNVVE-RSAFDVSLEENFACYPW 213
           LFCLGEE+G F  CN NNVVE  SAFDVS+EEN   YPW
Sbjct: 181 LFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCVGYPW 218

[Close]

BLAST of Lcy13g008990 vs. NCBI nr
Match: XP_038889414.1 (LOB domain-containing protein 33-like [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94
Identity = 184/219 (84.02%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MTGLN---SSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSK 60
           MTGLN   SSSSSSSSCGACKFLRRKCSDQCVFAPFFSY+EATSHFAAVHKVFGASNVSK
Sbjct: 1   MTGLNSSISSSSSSSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSK 60

Query: 61  LLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANF 120
           LLLHLP+HIRSHAA+TVAYEALERMRDPTYGCVAHIFALQQE+ SLQEEI+ILGSQIANF
Sbjct: 61  LLLHLPVHIRSHAAVTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF 120

Query: 121 TVNSGRLAAVENPFI-ELQASQQLNDF-VMNTNDYQNELLSQLPHQTFDHAQNDD-QMIS 180
               G +AAVENP I +LQ SQQLNDF VMNTNDYQNELLS+LP+Q+FD+ QND+ QMIS
Sbjct: 121 AAAGGSIAAVENPLIDQLQVSQQLNDFGVMNTNDYQNELLSELPYQSFDNVQNDNGQMIS 180

Query: 181 PLFCLGEEEGFFG-CNPNNVVERSAFDVSLEENFACYPW 213
           PLFCLGEE+G  G CN NNVVERSAFDVS+EENF  YPW
Sbjct: 181 PLFCLGEEDGVLGFCNSNNVVERSAFDVSVEENFIGYPW 219

[Close]

BLAST of Lcy13g008990 vs. NCBI nr
Match: XP_023542245.1 (LOB domain-containing protein 33-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 181/215 (84.19%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MTGL--NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKL 60
           MTGL  +SSSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKL
Sbjct: 1   MTGLTSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKL 60

Query: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFT 120
           LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEI+SLQEEID+LGSQIANFT
Sbjct: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIVSLQEEIDMLGSQIANFT 120

Query: 121 VNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMISPLF 180
            +   +A VENP IELQ S+QLND VMNTNDYQNELLSQLP  TFD  + ND QMISPLF
Sbjct: 121 ADMDNVAVVENPCIELQVSKQLNDLVMNTNDYQNELLSQLP--TFDEVETNDAQMISPLF 180

Query: 181 CLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           C+GEEEGFFGCNPNN +E SAFDVS++ENFA Y W
Sbjct: 181 CIGEEEGFFGCNPNNAMENSAFDVSVDENFA-YLW 212

[Close]

BLAST of Lcy13g008990 vs. NCBI nr
Match: XP_022996495.1 (LOB domain-containing protein 33-like [Cucurbita maxima])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 177/217 (81.57%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MTGL----NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVS 60
           MTGL    +SSSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVS
Sbjct: 1   MTGLTSSSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVS 60

Query: 61  KLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIAN 120
           KLLLHLPMH+RSHAAITV+YEALERMRDPTYGCVAHIF LQQEI+SLQEEID+LGSQIAN
Sbjct: 61  KLLLHLPMHVRSHAAITVSYEALERMRDPTYGCVAHIFTLQQEIMSLQEEIDMLGSQIAN 120

Query: 121 FTVNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMISP 180
           FT +   +A VENP +ELQ S+QLN+ VMNTNDYQNELLSQLP  TFD  Q ND QMISP
Sbjct: 121 FTTDMDNVAVVENPSMELQVSKQLNELVMNTNDYQNELLSQLP--TFDEVQINDAQMISP 180

Query: 181 LFCLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           LFC+GEEEGFFGCNPNN +E SAFDVS++ENFA Y W
Sbjct: 181 LFCIGEEEGFFGCNPNNAMENSAFDVSVDENFA-YLW 214

[Close]

BLAST of Lcy13g008990 vs. NCBI nr
Match: XP_022941701.1 (LOB domain-containing protein 33-like [Cucurbita moschata])

HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 1   MTGLN--SSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKL 60
           MTGL   SSSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKL
Sbjct: 1   MTGLTSYSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKL 60

Query: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFT 120
           LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEI+SLQEEID+LGSQIANFT
Sbjct: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIANFT 120

Query: 121 VNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMISPLF 180
            +   +A VENP IELQ S+QLND VMNTNDYQNELLSQLP+  FD  + ND QMISPLF
Sbjct: 121 ADMDNVAVVENPCIELQVSKQLNDLVMNTNDYQNELLSQLPN--FDQVEINDAQMISPLF 180

Query: 181 CLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           C+GEE+GFFGCNPNN +E SAFDV+++E F  Y W
Sbjct: 181 CIGEEDGFFGCNPNNAMENSAFDVAVDETFG-YLW 212

[Close]

BLAST of Lcy13g008990 vs. NCBI nr
Match: KAG7030707.1 (LOB domain-containing protein 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.0 bits (876), Expect = 3.6e-90
Identity = 175/218 (80.28%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MTGL-----NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNV 60
           MTGL     +SSSSSSSSCGACKFLRRKCS+ CVFAPFF+Y+EATSHFAAVHKVFGASNV
Sbjct: 2   MTGLTSSSSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYEEATSHFAAVHKVFGASNV 61

Query: 61  SKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIA 120
           SKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEI+SLQEEID+LGSQIA
Sbjct: 62  SKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIA 121

Query: 121 NFTVNSGRLAAVENPFIELQASQQLNDFVMNTNDYQNELLSQLPHQTFDHAQ-NDDQMIS 180
           NFT +   +  VENP IELQ S+QLND VMNTNDYQNELLSQLP+   D  + ND QMIS
Sbjct: 122 NFTADMDNVTVVENPCIELQVSKQLNDLVMNTNDYQNELLSQLPN--LDRVEINDAQMIS 181

Query: 181 PLFCLGEEEGFFGCNPNNVVERSAFDVSLEENFACYPW 213
           PLFC+GEE+GFFGCNPNN +E SAFDV+++ENFA Y W
Sbjct: 182 PLFCIGEEDGFFGCNPNNAMENSAFDVAIDENFA-YLW 216

[Close]

BLAST of Lcy13g008990 vs. TAIR 10
Match: AT5G06080.1 (LOB domain-containing protein 33 )

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-43
Identity = 86/146 (58.90%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 8   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHIR 67
           +S  SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 68  SHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVNSGRLAAV 127
           + AAIT++YEAL RMRDP YGCVAHIFAL Q++++LQEEI+ LGSQ+ NF+ ++   + +
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 128 ENPFIELQASQQLNDFVMNTNDYQNE 154
            N        + +N   M T ++ +E
Sbjct: 122 NN------IPEFVNQMTMATTNFVDE 141

[Close]

BLAST of Lcy13g008990 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 72/111 (64.86%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 5   NSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPM 64
           +SSSSS S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP+
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 65  HIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIA 116
             R  AAIT++YEA  R++DP YGCV+HIFALQQ++++LQ E++IL  Q A
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAA 113

[Close]

BLAST of Lcy13g008990 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 145.6 bits (366), Expect = 4.6e-35
Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 3   GLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHL 62
           G +S       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 63  PMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIAN 117
           P+H RS A +T+ YEA  R+RDP YGCVAHIFALQQ++++LQ E+  L + +A+
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of Lcy13g008990 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.6e-34
Identity = 76/163 (46.63%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 8   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMHIR 67
           + S S CGACKFLRR+C   CVFAP+F +++  SHFAA+H+VFGASN SKLL HLPM  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 68  SHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIANFTVNSGRLAAV 127
             AA T+ YEA  R +DP YGCV+HIF+LQQ++++LQ +++IL  Q          + A+
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQ------SMMAI 121

Query: 128 ENPFIE------------LQASQQLNDFVMNTNDYQNELLSQL 159
           ++P IE            LQ S  L+   + T++ Q E  S L
Sbjct: 122 DSPSIENPNYYQDTKPQYLQESHDLHHHHLTTSNCQTEQNSDL 158

[Close]

BLAST of Lcy13g008990 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 64/114 (56.14%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   TGLNSSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 61
           +G  +++ + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 62  LPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIISLQEEIDILGSQIA 116
           +P+H R  A +T+AYEA  R+ DP YGCV+HIFALQQ++  LQ ++  + +QIA
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

The following BLAST results are available for this feature:

BLAST of Lcy13g008990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS8	2.9e-42	58.90	LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 S...	[more]
Q9M2J7	6.9e-36	64.86	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
O22131	6.4e-34	58.77	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9SLB6	9.3e-33	46.63	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q9SLB7	2.1e-32	56.14	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of Lcy13g008990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K6X9	7.0e-92	81.57	LOB domain-containing protein 33-like OS=Cucurbita maxima OX=3661 GN=LOC11149172...	[more]
A0A6J1FLU4	4.5e-91	81.86	LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446...	[more]
A0A6J1CDB4	2.8e-88	79.34	LOB domain-containing protein 33 OS=Momordica charantia OX=3673 GN=LOC111010160 ...	[more]
A0A0A0KNX8	5.2e-87	78.90	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV...	[more]
A0A1S3CGM1	3.4e-86	78.54	LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE...	[more]

BLAST of Lcy13g008990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889414.1	4.1e-94	84.02	LOB domain-containing protein 33-like [Benincasa hispida]	[more]
XP_023542245.1	2.0e-93	84.19	LOB domain-containing protein 33-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996495.1	1.4e-91	81.57	LOB domain-containing protein 33-like [Cucurbita maxima]	[more]
XP_022941701.1	9.4e-91	81.86	LOB domain-containing protein 33-like [Cucurbita moschata]	[more]
KAG7030707.1	3.6e-90	80.28	LOB domain-containing protein 33, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Lcy13g008990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06080.1	2.0e-43	58.90	LOB domain-containing protein 33	[more]
AT3G58190.1	4.9e-37	64.86	lateral organ boundaries-domain 29	[more]
AT2G45420.1	4.6e-35	58.77	LOB domain-containing protein 18	[more]
AT2G42440.1	6.6e-34	46.63	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G42430.1	1.5e-33	56.14	lateral organ boundaries-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 13..109 e-value: 1.4E-32 score: 112.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 12..114 score: 21.704844
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 10..163
None	No IPR available	PANTHER	PTHR31529:SF50	LOB DOMAIN-CONTAINING PROTEIN 33	coord: 10..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g008990.1	Lcy13g008990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus