Lcy13g007520 (gene) Sponge gourd (P93075) v1

Overview
NameLcy13g007520
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionferredoxin-thioredoxin reductase, variable chain
LocationChr13: 7088124 .. 7091668 (+)
RNA-Seq ExpressionLcy13g007520
SyntenyLcy13g007520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCTGTAAATATTAAAAATTCTCAATAATATAAAACTCCTCCTTCGGCGAAGACTCCACCGGCGACACAGAGATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAATCAGGCTTATTGAATCATCAGACCAACGCAATTACTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTATCAACCTTTTAAGGTTTGATCCTCTTCTATTTACATCCATTCACTCTTTGCCTTTGTAATGTAGAGAATTGCTCGAGTGTTTTTCGTTTGAGCTAATTAACCTTCTCCATTATCGATGTGGCTCTGTAAAATAATTGAACCAAGAGGTAAATTTAGTCATCTAATACATGTCGAATCAAATGGTTTCAAAATTGGTTTCTCTTGTATGGATGTTGTTTTCGACCACTTGTCATGTTCTATCTTTTACTTGGAGAGAGGATGGGGATTCGCGGTGGATGACATAGAGCAATGCCCGTGAGTTTGCCTTCCATTTTGAAGATAAATGCCTGCTTGATTCTTGTGACTTGCCGAAGTTTATATTTTGCTTTGAATAAGAAATTTCTGTTTGTCTAAAAGAGCTAACATTTTTTTTATCCATGTATGTTCAAAATAATCCAAGATTTCGCAAATGACCACTTCTCTGTTTGTGACTAATTACTGATGAGGACAAGAATTAGTGGGAGGAATATGAAGCCTAATTTTAGATGATTATTGAGGAGTATAGACTTGAGGTATGTAGTACCCATTTGATGGATAATACTTGGTTATCTGTAAATATGATTTTTGTATGAATAGTCATAGCCAGTTCTTGCATTCTGGTTTTAGTGCATGGTTGATTAGGTAGGCCTGAGTTGGCTCGGTCCAAATTGAAGTGATATTATGAAAAGTTTCTCACAAAACCAATTGAATTGTACATATTACTAGCCTCATAAGGTTGTACTATATGCTTATCTTTTCATTGGACGTGCATTTAAGATAACAAAGTCAATTGGTTCTGATCAACATGGGTTTCTTTTACTTGTGAGGATCTTGTTGACTTGGCTTCAAAGAGGAATGTTAGTGTTTGTTCATTCTTACATCTTTGAAAGCATACCTACATGTCTAGGACTTGCAGGTTAAAAGGCCATTGAGCTCCTCCATACAGCATACTGTTGATTTACTTTGGTGTAGGGTATTAAAATAGTCAATTACGTTCTCTGGTAAGGGCAATATATATATAAGAAACCATGGTTTCATTGAGAAAAAATGAAGGAATACAAGAGGACATACAAAAAACAAGCCTGCCAAAAACACCCGCCTTGACTACAGGAACGGGTTCCGGTCCAAAATAATAAGACCGAGTTGATAATTACAAAAAAGCTTAGAAACAGGTGCCCACAAAGACGAGTTAAATCTAATCGTCTCCCAAAGCTCATTCGTGGATTTCTCCACCCCTCTAATAATTCTACTATTCCTCTCAAGCCATATACCCCACAAAATAGCAAAGAAGCACGCTTGCCAAAGAACTCTCCCTTTGTCTCAAGAACCGAGCTGATAGTTAAGGGCAATATATTGAACACCAAATCTTGTACTGTTCTTGAGTTGCCAGTTTAGAAGAAACTAGCTAAGTTCTAGCTTAGTAGATTAGGTCAATACACGGGACTTCTTCTAAAATCTTGTCTTCGACCCATACATAAAGATGATCCAGGGTAAAAATATGTTGAAGGTCAAGATGGAGGGATGGAAAACTAAGAATGAAAAAGAAGGTTATAAGTCGTTTGAAGTTCATAAACTTAAGATTTCTTTCAACTGTGATTATCTTGCTATTTAGTATTCACTAAAGTAGAAACTTAACATTGAATGCTCATATTATAAAAATTGGAAAACTGGATGGCCTATTTGCTATAATTGAAATGATTACTGTTGAAGTATGGATATAAAATTAAATTTACCAACTCGTAAACTTAAGTTTTTGAGTTGATTGGTGAATTAACATGGTATTAAAGCAAGAGGTCCTGAGTTTAAACTCCTGTAATGTCATTTTCTCCCCAACTAATTTTAAATTTTCACTTGATGAGTTTGTCTACAAATTTCTAAGCCCACAAGTGAAGGGAAGTGTTGAAGTATTAATATAAAATTAAATTTACCATAACCCATAAACTTAAACTTTTGAGTTGGTTGGTTATTTAAAATCTGCATATTGTGCACCTTATCTCATTTAATAACTCTGCACGATTACCTATGCCTCAGCTCAAAAGAGTTTAAGTCCTGAACATGAATGACTCTAGATGAGATGGAAAGGGGAATTCTTCAGATAAGAGGAGGGAGAGTGAGAGGAGTTTAATAATAAATCTCACTAAGAAGTTTTGAGGACCTGACCTTTTCGTTTGGACAAAACCCCTAGTATTGCTGAAACTGGACAATAGTCAATTTGTTTAGTTGTTTGTTTGTTGAAAGCTCTAATCACATATTTTCTTGGTGGAATGCGTGCAGAACTCTCTACATCTTTGCATGCTTTGAACGTGCTGCATTACATTGGAAAAGTGGTTGTTAAATCTCTACCAGCAGGGTACATATCTAATAAATTTTCATGAACATTTGTTATATGAAGTATCAATTGTTCAATTCTAGTGCAGCCTTTGGTCTACGATTGCATCGATATATTCTGTCCGAGTATTTATGTAACTAAAAGAACTAACTAGAAATAAGCATGGATCTGATGACAAACAAGATTTGAGAAAGCTGGGGAGAAAATGTAAAGAACCACAGATAGAACTGTTGAACTCACTTGGTTTCAGCCTAGAATAGAGTATGATGCTTCATTACATGGCATATTGCTGAAATTCTTGTTTCTGTTTCATTTTTCAAGTAATTGATAATCTGAAACTAGAAAAGCTCAAGGTAGACAAAGAGAAGCTATAGAAGTACTTTCCGTAGTGACGTTATTTAACATCGAGGTTAGCGGATGAATTCAATGCTATGTGAATGCCTGCATTGCTGAATTGATACTATTAGGAATAGCAAAGACTTGAAGCATTTG

mRNA sequence

ATTTCTGTAAATATTAAAAATTCTCAATAATATAAAACTCCTCCTTCGGCGAAGACTCCACCGGCGACACAGAGATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAATCAGGCTTATTGAATCATCAGACCAACGCAATTACTGTTTTTCCGATCTCAGTATTAATACCAAGCTCCCTTGTGCAGTATTATTATCAACCTTTTAAGGTTTGATCCTCTTCTATTTACATCCATTCACTCTTTGCCTTTGTAATGTAGAGAATTGCTCGAGTGTTTTTCGTTTGAGCTAATTAACCTTCTCCATTATCGATGTGGCTCTGTAAAATAATTGAACCAAGAGGTAAATTTAGTCATCTAATACATGTCGAATCAAATGGTTTCAAAATTGGTTTCTCTTGTATGGATGTTGTTTTCGACCACTTGTCATGTTCTATCTTTTACTTGGAGAGAGGATGGGGATTCGCGGTGGATGACATAGAGCAATGCCCGTGAGTTTGCCTTCCATTTTGAAGATAAATGCCTGCTTGATTCTTGTGACTTGCCGAAGTTTATATTTTGCTTTGAATAAGAAATTTCTGTTTGTCTAAAAGAGCTAACATTTTTTTTATCCATGTATGTTCAAAATAATCCAAGATTTCGCAAATGACCACTTCTCTGTTTGTGACTAATTACTGATGAGGACAAGAATTAGTGGGAGGAATATGAAGCCTAATTTTAGATGATTATTGAGGAGTATAGACTTGAGAACTCTCTACATCTTTGCATGCTTTGAACGTGCTGCATTACATTGGAAAAGTGGTTGTTAAATCTCTACCAGCAGGGTACATATCTAATAAATTTTCATGAACATTTGTTATATGAAGTATCAATTGTTCAATTCTAGTGCAGCCTTTGGTCTACGATTGCATCGATATATTCTGTCCGAGTATTTATGTAACTAAAAGAACTAACTAGAAATAAGCATGGATCTGATGACAAACAAGATTTGAGAAAGCTGGGGAGAAAATGTAAAGAACCACAGATAGAACTGTTGAACTCACTTGGTTTCAGCCTAGAATAGAGTATGATGCTTCATTACATGGCATATTGCTGAAATTCTTGTTTCTGTTTCATTTTTCAAGTAATTGATAATCTGAAACTAGAAAAGCTCAAGGTAGACAAAGAGAAGCTATAGAAGTACTTTCCGTAGTGACGTTATTTAACATCGAGGTTAGCGGATGAATTCAATGCTATGTGAATGCCTGCATTGCTGAATTGATACTATTAGGAATAGCAAAGACTTGAAGCATTTG

Coding sequence (CDS)

ATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTCCCGCCTGTTGTATGACGGTATTCTCTAGTGCTGATGTAAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATCTTTAGCGAGGTTACAGTCAGATCAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAAGGGAAGCGTGTTTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAA

Protein sequence

MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
Homology
[Close]
BLAST of Lcy13g007520 vs. ExPASy Swiss-Prot
Match: P80680 (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.9e-25
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0 

Query: 88  ATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRV 147
           A+  ++ EE   AAA +IG RVRV  PL+VYHV K P+ D++G+EGV+K YV VWKGKRV
Sbjct: 3   ASDDVAAEEA--AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRV 62

Query: 148 SANLPFKVEFVVPVEGRP-PVKFVAHLKEEEFEFV 182
           +AN PFKVEF + VEG+P PV+F AHL+E+EFEFV
Sbjct: 63  TANFPFKVEFELAVEGQPKPVRFFAHLREDEFEFV 95

[Close]
BLAST of Lcy13g007520 vs. ExPASy Swiss-Prot
Match: P38365 (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 9.4e-18
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0 

Query: 21  AAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNC-SIRRGR-----RIFSEVTVRS 80
           ++A  A   T  ++A  +       ++ S+ V + L C +I R R      I  EV ++S
Sbjct: 9   SSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRARLAICCEVALKS 68

Query: 81  DSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADL-EGLEG 140
           DS T       S++++   E+E  +    ++G +V+VK PLKVYHV KLPE +L   + G
Sbjct: 69  DSSTGFD----SSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVG 128

Query: 141 VLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV 182
           V+K YV  WKGK +S N PFKVE+ + V  R  VK V HLKEEEFE +
Sbjct: 129 VIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 172

[Close]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A0A0KV36 (FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.7e-75
Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MISIA+SIGVIPSPAP+SAS AAR AC MTVFS+ADVKSS+SS   SLSS+V+NP NCSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLP+A+LEG+EGV+KDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A5D3D039 (Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003240 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73
Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI IA+SIG++P P P+SAS AAR AC MTVFS++DV+SS+SS   SLSSVV+NP NCSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

Query: 181 V 182
           V
Sbjct: 962 V 962

[Close]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A1S3BEI2 (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73
Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI IA+SIG++P P P+SAS AAR AC MTVFS++DV+SS+SS   SLSSVV+NP NCSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A6J1H0Z6 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458936 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.5e-71
Identity = 154/181 (85.08%), Postives = 164/181 (90.61%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI++A+SIGVIP+PAP     AARPAC MTVFSS D KSSYS   SSLSSVV+NP NCSI
Sbjct: 1   MITMANSIGVIPTPAP----TAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
            RGRR FSEVTV+SDSGT SSA AVSAATTSLSE+ET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match: A0A6J1KDF2 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493885 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.6e-71
Identity = 153/181 (84.53%), Postives = 163/181 (90.06%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI++A+SIGVIP+PAP     AARPAC MTVFSS D KSSYSS  SSLSSVV+NP NCSI
Sbjct: 1   MITMANSIGVIPTPAP----TAARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
            RGRR FSEVTV+SDSGT SSA AVSAA TSLSE+ET EAAAARIGARVRVKVPL VYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_038893043.1 (ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 161/181 (88.95%), Postives = 171/181 (94.48%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MISIA+SIGVIP+PAP+SASAAAR AC MTVFS ADVKSSYSS   SLSSVV+NP NCSI
Sbjct: 1   MISIANSIGVIPTPAPSSASAAARSACSMTVFSCADVKSSYSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV VRSDSGTS SATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSPSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_004147092.1 (ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 hypothetical protein Csa_008440 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MISIA+SIGVIPSPAP+SAS AAR AC MTVFS+ADVKSS+SS   SLSS+V+NP NCSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLP+A+LEG+EGV+KDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]
BLAST of Lcy13g007520 vs. NCBI nr
Match: KAA0034101.1 (sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73
Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI IA+SIG++P P P+SAS AAR AC MTVFS++DV+SS+SS   SLSSVV+NP NCSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

Query: 181 V 182
           V
Sbjct: 962 V 962

[Close]
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_008445916.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 5.8e-73
Identity = 154/181 (85.08%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI IA+SIG++P P P+SAS AAR AC MTVFS++DV+SS+SS   SLSSVV+NP NCSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]
BLAST of Lcy13g007520 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 6.4e-72
Identity = 155/181 (85.64%), Postives = 165/181 (91.16%), Query Frame = 0 

Query: 1   MISIASSIGVIPSPAPASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSI 60
           MI++A+SIGVIP+PAP     AARPAC MTVFSS D KSSYS   SSLSSVV+NP NCSI
Sbjct: 1   MITMANSIGVIPTPAP----TAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHV 120
           RRGRR FSEVTV+SDSGT SSA AVSAATTSLSE+ET EAAAARIGARVRVKVPLKVYHV
Sbjct: 61  RRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEF 180
           AKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]
BLAST of Lcy13g007520 vs. TAIR 10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 )

HSP 1 Score: 127.9 bits (320), Expect = 8.4e-30
Identity = 84/177 (47.46%), Postives = 116/177 (65.54%), Query Frame = 0 

Query: 15  APASASAAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGR------RIFS 74
           +PA A+A  RP+    + +SA   ++ ++ P +L S ++ PL+    + +      R  S
Sbjct: 8   SPAIAAAIRRPSSHDCLSASA---TTATATPMALKSCIVAPLSLFTSQSQIKHSSSRKTS 67

Query: 75  EVTVRSD----SGTSSSATAVSAATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLP 134
             T+R D    S  S +A A  +++ S SEEE    A A+IG+RVRV  PLKVYHV ++P
Sbjct: 68  RTTIRCDVAIKSADSINADANPSSSPS-SEEEIEAEAKAKIGSRVRVTAPLKVYHVNRVP 127

Query: 135 EADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV 182
           E DLEG+EG LKDYV VWKGKR+SANLP+K+EF   +EGR  VKFV+HLKE+EFEF+
Sbjct: 128 EVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVKFVSHLKEDEFEFI 180

[Close]
BLAST of Lcy13g007520 vs. TAIR 10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 )

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = 0 

Query: 21  AAARPACCMTVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGR--------RIFSEVTV 80
           AA RP        +A + S   S+ SS SS+ + P++ S   GR        R   + T+
Sbjct: 13  AAVRPPASQDYLVAASL-SGRKSINSSSSSIFV-PISLSTSYGRSKCAFSISRKNPKSTI 72

Query: 81  RSDSGTSSSATAVSAATTSLS---EEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLE 140
           R D    S+A+  + A  S S   E E  E A  +IGARVRV VPLKVYHV ++PE +L 
Sbjct: 73  RCDIAVKSAASVDADADLSSSTSLETEEDEKAKEKIGARVRVTVPLKVYHVVRVPEVELM 132

Query: 141 GLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV 182
           G+EG +KDYV +WKGK++SANLPFKV+FV  +EGR PVKF  HLKE+EFE +
Sbjct: 133 GMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLKEDEFELI 182

The following BLAST results are available for this feature:
BLAST of Lcy13g007520 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P806807.9e-2562.11Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1[more]
P383659.4e-1839.29Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler... [more]
BLAST of Lcy13g007520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV366.7e-7587.85FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 P... [more]
A0A5D3D0392.8e-7385.08Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3BEI22.8e-7385.08ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1H0Z61.5e-7185.08ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit... [more]
A0A6J1KDF27.6e-7184.53ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit... [more]
BLAST of Lcy13g007520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893043.11.6e-7588.95ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida][more]
XP_004147092.11.4e-7487.85ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 h... [more]
KAA0034101.15.8e-7385.08sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphin... [more]
XP_008445916.15.8e-7385.08PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo][more]
XP_023549490.16.4e-7285.64ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ... [more]
BLAST of Lcy13g007520 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23440.18.4e-3047.46ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 [more]
AT5G08410.11.6e-2847.09ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004207Ferredoxin thioredoxin reductase, alpha chainPFAMPF02941FeThRed_Acoord: 105..177
e-value: 1.1E-25
score: 89.5
NoneNo IPR availableGENE3D2.30.30.50coord: 103..181
e-value: 7.8E-29
score: 101.5
NoneNo IPR availablePANTHERPTHR46937:SF4FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAINcoord: 22..181
IPR044166Ferredoxin-thioredoxin reductase, variable chainPANTHERPTHR46937FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAINcoord: 22..181
IPR008990Electron transport accessory-like domain superfamilySUPERFAMILY50090Electron transport accessory proteinscoord: 104..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy13g007520.1Lcy13g007520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0015979 photosynthesis
biological_process GO:0030148 sphingolipid biosynthetic process
molecular_function GO:0017050 D-erythro-sphingosine kinase activity
molecular_function GO:0003951 NAD+ kinase activity